data_3UYV # _entry.id 3UYV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3UYV pdb_00003uyv 10.2210/pdb3uyv/pdb RCSB RCSB069381 ? ? WWPDB D_1000069381 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3UYU _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3UYV _pdbx_database_status.recvd_initial_deposition_date 2011-12-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lee, J.H.' 1 'Park, A.K.' 2 'Do, H.' 3 'Park, K.S.' 4 'Moh, S.H.' 5 'Chi, Y.M.' 6 'Kim, H.J.' 7 # _citation.id primary _citation.title 'Structural basis for the antifreeze activity of an ice-binding protein from an Arctic yeast.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year 2012 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 1083-351X _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22303017 _citation.pdbx_database_id_DOI 10.1074/jbc.M111.331835 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lee, J.H.' 1 ? primary 'Park, A.K.' 2 ? primary 'Do, H.' 3 ? primary 'Park, K.S.' 4 ? primary 'Moh, S.H.' 5 ? primary 'Chi, Y.M.' 6 ? primary 'Kim, H.J.' 7 ? # _cell.entry_id 3UYV _cell.length_a 58.640 _cell.length_b 58.640 _cell.length_c 292.641 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3UYV _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Antifreeze protein' 24938.629 1 ? ? 'UNP RESIDUES 21-261' ? 2 branched man ;alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 748.682 1 ? ? ? ? 3 water nat water 18.015 14 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;QRDLSVELGVASNFAILAKAGISSVPDSAILGDIGVSPAAATYITGFGLTQDSSTTYATSPQVTGLIYAADYSTPTPNYL AAAVANAETAYNQAAGFVDPDFLELGAGELRDQTLVPGLYKWTSSVSVPTDLTFEGNGDATWVFQIAGGLSLADGVAFTL AGGANSTNIAFQVGDDVTVGKGAHFEGVLLAKRFVTLQTGSSLNGRVLSQTEVALQKATVNSPFVPAPEVVQKRSNARQW L ; _entity_poly.pdbx_seq_one_letter_code_can ;QRDLSVELGVASNFAILAKAGISSVPDSAILGDIGVSPAAATYITGFGLTQDSSTTYATSPQVTGLIYAADYSTPTPNYL AAAVANAETAYNQAAGFVDPDFLELGAGELRDQTLVPGLYKWTSSVSVPTDLTFEGNGDATWVFQIAGGLSLADGVAFTL AGGANSTNIAFQVGDDVTVGKGAHFEGVLLAKRFVTLQTGSSLNGRVLSQTEVALQKATVNSPFVPAPEVVQKRSNARQW L ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ARG n 1 3 ASP n 1 4 LEU n 1 5 SER n 1 6 VAL n 1 7 GLU n 1 8 LEU n 1 9 GLY n 1 10 VAL n 1 11 ALA n 1 12 SER n 1 13 ASN n 1 14 PHE n 1 15 ALA n 1 16 ILE n 1 17 LEU n 1 18 ALA n 1 19 LYS n 1 20 ALA n 1 21 GLY n 1 22 ILE n 1 23 SER n 1 24 SER n 1 25 VAL n 1 26 PRO n 1 27 ASP n 1 28 SER n 1 29 ALA n 1 30 ILE n 1 31 LEU n 1 32 GLY n 1 33 ASP n 1 34 ILE n 1 35 GLY n 1 36 VAL n 1 37 SER n 1 38 PRO n 1 39 ALA n 1 40 ALA n 1 41 ALA n 1 42 THR n 1 43 TYR n 1 44 ILE n 1 45 THR n 1 46 GLY n 1 47 PHE n 1 48 GLY n 1 49 LEU n 1 50 THR n 1 51 GLN n 1 52 ASP n 1 53 SER n 1 54 SER n 1 55 THR n 1 56 THR n 1 57 TYR n 1 58 ALA n 1 59 THR n 1 60 SER n 1 61 PRO n 1 62 GLN n 1 63 VAL n 1 64 THR n 1 65 GLY n 1 66 LEU n 1 67 ILE n 1 68 TYR n 1 69 ALA n 1 70 ALA n 1 71 ASP n 1 72 TYR n 1 73 SER n 1 74 THR n 1 75 PRO n 1 76 THR n 1 77 PRO n 1 78 ASN n 1 79 TYR n 1 80 LEU n 1 81 ALA n 1 82 ALA n 1 83 ALA n 1 84 VAL n 1 85 ALA n 1 86 ASN n 1 87 ALA n 1 88 GLU n 1 89 THR n 1 90 ALA n 1 91 TYR n 1 92 ASN n 1 93 GLN n 1 94 ALA n 1 95 ALA n 1 96 GLY n 1 97 PHE n 1 98 VAL n 1 99 ASP n 1 100 PRO n 1 101 ASP n 1 102 PHE n 1 103 LEU n 1 104 GLU n 1 105 LEU n 1 106 GLY n 1 107 ALA n 1 108 GLY n 1 109 GLU n 1 110 LEU n 1 111 ARG n 1 112 ASP n 1 113 GLN n 1 114 THR n 1 115 LEU n 1 116 VAL n 1 117 PRO n 1 118 GLY n 1 119 LEU n 1 120 TYR n 1 121 LYS n 1 122 TRP n 1 123 THR n 1 124 SER n 1 125 SER n 1 126 VAL n 1 127 SER n 1 128 VAL n 1 129 PRO n 1 130 THR n 1 131 ASP n 1 132 LEU n 1 133 THR n 1 134 PHE n 1 135 GLU n 1 136 GLY n 1 137 ASN n 1 138 GLY n 1 139 ASP n 1 140 ALA n 1 141 THR n 1 142 TRP n 1 143 VAL n 1 144 PHE n 1 145 GLN n 1 146 ILE n 1 147 ALA n 1 148 GLY n 1 149 GLY n 1 150 LEU n 1 151 SER n 1 152 LEU n 1 153 ALA n 1 154 ASP n 1 155 GLY n 1 156 VAL n 1 157 ALA n 1 158 PHE n 1 159 THR n 1 160 LEU n 1 161 ALA n 1 162 GLY n 1 163 GLY n 1 164 ALA n 1 165 ASN n 1 166 SER n 1 167 THR n 1 168 ASN n 1 169 ILE n 1 170 ALA n 1 171 PHE n 1 172 GLN n 1 173 VAL n 1 174 GLY n 1 175 ASP n 1 176 ASP n 1 177 VAL n 1 178 THR n 1 179 VAL n 1 180 GLY n 1 181 LYS n 1 182 GLY n 1 183 ALA n 1 184 HIS n 1 185 PHE n 1 186 GLU n 1 187 GLY n 1 188 VAL n 1 189 LEU n 1 190 LEU n 1 191 ALA n 1 192 LYS n 1 193 ARG n 1 194 PHE n 1 195 VAL n 1 196 THR n 1 197 LEU n 1 198 GLN n 1 199 THR n 1 200 GLY n 1 201 SER n 1 202 SER n 1 203 LEU n 1 204 ASN n 1 205 GLY n 1 206 ARG n 1 207 VAL n 1 208 LEU n 1 209 SER n 1 210 GLN n 1 211 THR n 1 212 GLU n 1 213 VAL n 1 214 ALA n 1 215 LEU n 1 216 GLN n 1 217 LYS n 1 218 ALA n 1 219 THR n 1 220 VAL n 1 221 ASN n 1 222 SER n 1 223 PRO n 1 224 PHE n 1 225 VAL n 1 226 PRO n 1 227 ALA n 1 228 PRO n 1 229 GLU n 1 230 VAL n 1 231 VAL n 1 232 GLN n 1 233 LYS n 1 234 ARG n 1 235 SER n 1 236 ASN n 1 237 ALA n 1 238 ARG n 1 239 GLN n 1 240 TRP n 1 241 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene AFP _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain AY30 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name Leucosporidium _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 662878 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Komagataella pastoris' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code C7F6X3_9BASI _struct_ref.pdbx_db_accession C7F6X3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QRDLSVELGVASNFAILAKAGISSVPDSAILGDIGVSPAAATYITGFGLTQDSSTTYATSPQVTGLIYAADYSTPTPNYL AAAVANAETAYNQAAGFVDPDFLELGAGELRDQTLVPGLYKWTSSVSVPTDLTFEGNGDATWVFQIAGGLSLADGVAFTL AGGANSTNIAFQVGDDVTVGKGAHFEGVLLAKRFVTLQTGSSLNGRVLSQTEVALQKATVNSPFVPAPEVVQKRSNARQW L ; _struct_ref.pdbx_align_begin 21 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3UYV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 241 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession C7F6X3 _struct_ref_seq.db_align_beg 21 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 261 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 21 _struct_ref_seq.pdbx_auth_seq_align_end 261 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3UYV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.91 _exptl_crystal.density_percent_sol 57.76 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.1M imidazole, pH 8.5, 1. M potassium phosphate, 0.5M sodium phosphate, 0.2M NaCl, VAPOR DIFFUSION, HANGING DROP, temperature 292K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 200 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.pdbx_collection_date 2011-06-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Confocal Max-Flux (CMF) optics' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54180 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54180 # _reflns.entry_id 3UYV _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 50.78 _reflns.d_resolution_high 2.43 _reflns.number_obs 11149 _reflns.number_all 11886 _reflns.percent_possible_obs 93.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.43 _reflns_shell.d_res_low 2.56 _reflns_shell.percent_possible_all 99.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3UYV _refine.ls_number_reflns_obs 10549 _refine.ls_number_reflns_all 11149 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.78 _refine.ls_d_res_high 2.43 _refine.ls_percent_reflns_obs 91.22 _refine.ls_R_factor_obs 0.23587 _refine.ls_R_factor_all 0.23656 _refine.ls_R_factor_R_work 0.23338 _refine.ls_R_factor_R_free 0.28617 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 533 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.904 _refine.correlation_coeff_Fo_to_Fc_free 0.856 _refine.B_iso_mean 23.596 _refine.aniso_B[1][1] -0.01 _refine.aniso_B[2][2] -0.01 _refine.aniso_B[3][3] 0.02 _refine.aniso_B[1][2] -0.01 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 3UYU _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.414 _refine.pdbx_overall_ESU_R_Free 0.296 _refine.overall_SU_ML 0.210 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 9.092 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1674 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 50 _refine_hist.number_atoms_solvent 14 _refine_hist.number_atoms_total 1738 _refine_hist.d_res_high 2.43 _refine_hist.d_res_low 50.78 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.018 0.022 ? 1762 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2.208 1.989 ? 2416 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.821 5.000 ? 229 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 32.201 25.606 ? 66 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 17.298 15.000 ? 235 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 8.782 15.000 ? 4 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.114 0.200 ? 301 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.007 0.021 ? 1318 ? 'X-RAY DIFFRACTION' r_mcbond_it 0.793 1.500 ? 1140 ? 'X-RAY DIFFRACTION' r_mcangle_it 1.439 2.000 ? 1823 ? 'X-RAY DIFFRACTION' r_scbond_it 2.054 3.000 ? 622 ? 'X-RAY DIFFRACTION' r_scangle_it 3.338 4.500 ? 591 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.432 _refine_ls_shell.d_res_low 2.495 _refine_ls_shell.number_reflns_R_work 788 _refine_ls_shell.R_factor_R_work 0.340 _refine_ls_shell.percent_reflns_obs 99.65 _refine_ls_shell.R_factor_R_free 0.331 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 56 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3UYV _struct.title 'Crystal structure of a glycosylated ice-binding protein (LeIBP) from Arctic yeast' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3UYV _struct_keywords.pdbx_keywords 'ANTIFREEZE PROTEIN' _struct_keywords.text 'right-handed beta-helix fold, ICE BINDING PROTEIN, ANTIFREEZE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 8 ? SER A 12 ? LEU A 28 SER A 32 5 ? 5 HELX_P HELX_P2 2 ALA A 40 ? THR A 42 ? ALA A 60 THR A 62 5 ? 3 HELX_P HELX_P3 3 PRO A 75 ? PHE A 97 ? PRO A 95 PHE A 117 1 ? 23 HELX_P HELX_P4 4 LEU A 105 ? GLU A 109 ? LEU A 125 GLU A 129 5 ? 5 HELX_P HELX_P5 5 ASN A 165 ? THR A 167 ? ASN A 185 THR A 187 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A ASN 165 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 185 B NAG 1 1_555 ? ? ? ? ? ? ? 1.262 ? N-Glycosylation covale2 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale3 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.438 ? ? covale4 covale both ? B BMA . O6 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 4 1_555 ? ? ? ? ? ? ? 1.438 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PRO 26 A . ? PRO 46 A ASP 27 A ? ASP 47 A 1 -4.80 2 SER 37 A . ? SER 57 A PRO 38 A ? PRO 58 A 1 2.01 3 ASP 52 A . ? ASP 72 A SER 53 A ? SER 73 A 1 4.13 4 THR 74 A . ? THR 94 A PRO 75 A ? PRO 95 A 1 1.34 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 9 ? C ? 7 ? D ? 2 ? E ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? parallel B 7 8 ? parallel B 8 9 ? parallel C 1 2 ? parallel C 2 3 ? parallel C 3 4 ? parallel C 4 5 ? parallel C 5 6 ? parallel C 6 7 ? parallel D 1 2 ? anti-parallel E 1 2 ? parallel E 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 63 ? THR A 64 ? VAL A 83 THR A 84 A 2 ALA A 29 ? LEU A 31 ? ALA A 49 LEU A 51 A 3 THR A 219 ? ASN A 221 ? THR A 239 ASN A 241 A 4 SER A 202 ? SER A 209 ? SER A 222 SER A 229 A 5 PHE A 14 ? ALA A 18 ? PHE A 34 ALA A 38 A 6 ASP A 33 ? VAL A 36 ? ASP A 53 VAL A 56 A 7 ILE A 67 ? ALA A 69 ? ILE A 87 ALA A 89 B 1 VAL A 63 ? THR A 64 ? VAL A 83 THR A 84 B 2 ALA A 29 ? LEU A 31 ? ALA A 49 LEU A 51 B 3 THR A 219 ? ASN A 221 ? THR A 239 ASN A 241 B 4 SER A 202 ? SER A 209 ? SER A 222 SER A 229 B 5 HIS A 184 ? ALA A 191 ? HIS A 204 ALA A 211 B 6 ILE A 169 ? VAL A 173 ? ILE A 189 VAL A 193 B 7 TRP A 142 ? ILE A 146 ? TRP A 162 ILE A 166 B 8 GLY A 118 ? TRP A 122 ? GLY A 138 TRP A 142 B 9 PHE A 102 ? LEU A 103 ? PHE A 122 LEU A 123 C 1 ILE A 44 ? THR A 45 ? ILE A 64 THR A 65 C 2 GLY A 21 ? VAL A 25 ? GLY A 41 VAL A 45 C 3 GLU A 212 ? GLN A 216 ? GLU A 232 GLN A 236 C 4 VAL A 195 ? LEU A 197 ? VAL A 215 LEU A 217 C 5 VAL A 177 ? VAL A 179 ? VAL A 197 VAL A 199 C 6 LEU A 150 ? LEU A 152 ? LEU A 170 LEU A 172 C 7 VAL A 126 ? VAL A 128 ? VAL A 146 VAL A 148 D 1 THR A 50 ? GLN A 51 ? THR A 70 GLN A 71 D 2 ALA A 58 ? THR A 59 ? ALA A 78 THR A 79 E 1 THR A 114 ? LEU A 115 ? THR A 134 LEU A 135 E 2 LEU A 132 ? GLU A 135 ? LEU A 152 GLU A 155 E 3 PHE A 158 ? ALA A 161 ? PHE A 178 ALA A 181 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 64 ? O THR A 84 N ILE A 30 ? N ILE A 50 A 2 3 N LEU A 31 ? N LEU A 51 O VAL A 220 ? O VAL A 240 A 3 4 O ASN A 221 ? O ASN A 241 N LEU A 203 ? N LEU A 223 A 4 5 O VAL A 207 ? O VAL A 227 N LEU A 17 ? N LEU A 37 A 5 6 N ALA A 18 ? N ALA A 38 O GLY A 35 ? O GLY A 55 A 6 7 N ILE A 34 ? N ILE A 54 O TYR A 68 ? O TYR A 88 B 1 2 O THR A 64 ? O THR A 84 N ILE A 30 ? N ILE A 50 B 2 3 N LEU A 31 ? N LEU A 51 O VAL A 220 ? O VAL A 240 B 3 4 O ASN A 221 ? O ASN A 241 N LEU A 203 ? N LEU A 223 B 4 5 O ARG A 206 ? O ARG A 226 N LEU A 189 ? N LEU A 209 B 5 6 O VAL A 188 ? O VAL A 208 N ILE A 169 ? N ILE A 189 B 6 7 O GLN A 172 ? O GLN A 192 N PHE A 144 ? N PHE A 164 B 7 8 O GLN A 145 ? O GLN A 165 N TYR A 120 ? N TYR A 140 B 8 9 O LYS A 121 ? O LYS A 141 N PHE A 102 ? N PHE A 122 C 1 2 O THR A 45 ? O THR A 65 N ILE A 22 ? N ILE A 42 C 2 3 N SER A 23 ? N SER A 43 O VAL A 213 ? O VAL A 233 C 3 4 O ALA A 214 ? O ALA A 234 N VAL A 195 ? N VAL A 215 C 4 5 O THR A 196 ? O THR A 216 N VAL A 179 ? N VAL A 199 C 5 6 O THR A 178 ? O THR A 198 N LEU A 150 ? N LEU A 170 C 6 7 O SER A 151 ? O SER A 171 N VAL A 126 ? N VAL A 146 D 1 2 N THR A 50 ? N THR A 70 O THR A 59 ? O THR A 79 E 1 2 N LEU A 115 ? N LEU A 135 O THR A 133 ? O THR A 153 E 2 3 N PHE A 134 ? N PHE A 154 O ALA A 161 ? O ALA A 181 # _database_PDB_matrix.entry_id 3UYV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3UYV _atom_sites.fract_transf_matrix[1][1] 0.017053 _atom_sites.fract_transf_matrix[1][2] 0.009846 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019691 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003417 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'NAG B 2 HAS WRONG CHIRALITY AT ATOM C1' 2 'MAN B 4 HAS WRONG CHIRALITY AT ATOM C1' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 21 21 GLN GLN A . n A 1 2 ARG 2 22 22 ARG ARG A . n A 1 3 ASP 3 23 23 ASP ASP A . n A 1 4 LEU 4 24 24 LEU LEU A . n A 1 5 SER 5 25 25 SER SER A . n A 1 6 VAL 6 26 26 VAL VAL A . n A 1 7 GLU 7 27 27 GLU GLU A . n A 1 8 LEU 8 28 28 LEU LEU A . n A 1 9 GLY 9 29 29 GLY GLY A . n A 1 10 VAL 10 30 30 VAL VAL A . n A 1 11 ALA 11 31 31 ALA ALA A . n A 1 12 SER 12 32 32 SER SER A . n A 1 13 ASN 13 33 33 ASN ASN A . n A 1 14 PHE 14 34 34 PHE PHE A . n A 1 15 ALA 15 35 35 ALA ALA A . n A 1 16 ILE 16 36 36 ILE ILE A . n A 1 17 LEU 17 37 37 LEU LEU A . n A 1 18 ALA 18 38 38 ALA ALA A . n A 1 19 LYS 19 39 39 LYS LYS A . n A 1 20 ALA 20 40 40 ALA ALA A . n A 1 21 GLY 21 41 41 GLY GLY A . n A 1 22 ILE 22 42 42 ILE ILE A . n A 1 23 SER 23 43 43 SER SER A . n A 1 24 SER 24 44 44 SER SER A . n A 1 25 VAL 25 45 45 VAL VAL A . n A 1 26 PRO 26 46 46 PRO PRO A . n A 1 27 ASP 27 47 47 ASP ASP A . n A 1 28 SER 28 48 48 SER SER A . n A 1 29 ALA 29 49 49 ALA ALA A . n A 1 30 ILE 30 50 50 ILE ILE A . n A 1 31 LEU 31 51 51 LEU LEU A . n A 1 32 GLY 32 52 52 GLY GLY A . n A 1 33 ASP 33 53 53 ASP ASP A . n A 1 34 ILE 34 54 54 ILE ILE A . n A 1 35 GLY 35 55 55 GLY GLY A . n A 1 36 VAL 36 56 56 VAL VAL A . n A 1 37 SER 37 57 57 SER SER A . n A 1 38 PRO 38 58 58 PRO PRO A . n A 1 39 ALA 39 59 59 ALA ALA A . n A 1 40 ALA 40 60 60 ALA ALA A . n A 1 41 ALA 41 61 61 ALA ALA A . n A 1 42 THR 42 62 62 THR THR A . n A 1 43 TYR 43 63 63 TYR TYR A . n A 1 44 ILE 44 64 64 ILE ILE A . n A 1 45 THR 45 65 65 THR THR A . n A 1 46 GLY 46 66 66 GLY GLY A . n A 1 47 PHE 47 67 67 PHE PHE A . n A 1 48 GLY 48 68 68 GLY GLY A . n A 1 49 LEU 49 69 69 LEU LEU A . n A 1 50 THR 50 70 70 THR THR A . n A 1 51 GLN 51 71 71 GLN GLN A . n A 1 52 ASP 52 72 72 ASP ASP A . n A 1 53 SER 53 73 73 SER ALA A . n A 1 54 SER 54 74 ? ? ? A . n A 1 55 THR 55 75 75 THR THR A . n A 1 56 THR 56 76 76 THR THR A . n A 1 57 TYR 57 77 77 TYR TYR A . n A 1 58 ALA 58 78 78 ALA ALA A . n A 1 59 THR 59 79 79 THR THR A . n A 1 60 SER 60 80 80 SER SER A . n A 1 61 PRO 61 81 81 PRO PRO A . n A 1 62 GLN 62 82 82 GLN GLN A . n A 1 63 VAL 63 83 83 VAL VAL A . n A 1 64 THR 64 84 84 THR THR A . n A 1 65 GLY 65 85 85 GLY GLY A . n A 1 66 LEU 66 86 86 LEU LEU A . n A 1 67 ILE 67 87 87 ILE ILE A . n A 1 68 TYR 68 88 88 TYR TYR A . n A 1 69 ALA 69 89 89 ALA ALA A . n A 1 70 ALA 70 90 90 ALA ALA A . n A 1 71 ASP 71 91 91 ASP ASP A . n A 1 72 TYR 72 92 92 TYR TYR A . n A 1 73 SER 73 93 93 SER SER A . n A 1 74 THR 74 94 94 THR THR A . n A 1 75 PRO 75 95 95 PRO PRO A . n A 1 76 THR 76 96 96 THR THR A . n A 1 77 PRO 77 97 97 PRO PRO A . n A 1 78 ASN 78 98 98 ASN ASN A . n A 1 79 TYR 79 99 99 TYR TYR A . n A 1 80 LEU 80 100 100 LEU LEU A . n A 1 81 ALA 81 101 101 ALA ALA A . n A 1 82 ALA 82 102 102 ALA ALA A . n A 1 83 ALA 83 103 103 ALA ALA A . n A 1 84 VAL 84 104 104 VAL VAL A . n A 1 85 ALA 85 105 105 ALA ALA A . n A 1 86 ASN 86 106 106 ASN ASN A . n A 1 87 ALA 87 107 107 ALA ALA A . n A 1 88 GLU 88 108 108 GLU GLU A . n A 1 89 THR 89 109 109 THR THR A . n A 1 90 ALA 90 110 110 ALA ALA A . n A 1 91 TYR 91 111 111 TYR TYR A . n A 1 92 ASN 92 112 112 ASN ASN A . n A 1 93 GLN 93 113 113 GLN GLN A . n A 1 94 ALA 94 114 114 ALA ALA A . n A 1 95 ALA 95 115 115 ALA ALA A . n A 1 96 GLY 96 116 116 GLY GLY A . n A 1 97 PHE 97 117 117 PHE PHE A . n A 1 98 VAL 98 118 118 VAL VAL A . n A 1 99 ASP 99 119 119 ASP ASP A . n A 1 100 PRO 100 120 120 PRO PRO A . n A 1 101 ASP 101 121 121 ASP ASP A . n A 1 102 PHE 102 122 122 PHE PHE A . n A 1 103 LEU 103 123 123 LEU LEU A . n A 1 104 GLU 104 124 124 GLU GLU A . n A 1 105 LEU 105 125 125 LEU LEU A . n A 1 106 GLY 106 126 126 GLY GLY A . n A 1 107 ALA 107 127 127 ALA ALA A . n A 1 108 GLY 108 128 128 GLY GLY A . n A 1 109 GLU 109 129 129 GLU GLU A . n A 1 110 LEU 110 130 130 LEU LEU A . n A 1 111 ARG 111 131 131 ARG ARG A . n A 1 112 ASP 112 132 132 ASP ASP A . n A 1 113 GLN 113 133 133 GLN GLN A . n A 1 114 THR 114 134 134 THR THR A . n A 1 115 LEU 115 135 135 LEU LEU A . n A 1 116 VAL 116 136 136 VAL VAL A . n A 1 117 PRO 117 137 137 PRO PRO A . n A 1 118 GLY 118 138 138 GLY GLY A . n A 1 119 LEU 119 139 139 LEU LEU A . n A 1 120 TYR 120 140 140 TYR TYR A . n A 1 121 LYS 121 141 141 LYS LYS A . n A 1 122 TRP 122 142 142 TRP TRP A . n A 1 123 THR 123 143 143 THR THR A . n A 1 124 SER 124 144 144 SER SER A . n A 1 125 SER 125 145 145 SER SER A . n A 1 126 VAL 126 146 146 VAL VAL A . n A 1 127 SER 127 147 147 SER SER A . n A 1 128 VAL 128 148 148 VAL VAL A . n A 1 129 PRO 129 149 149 PRO PRO A . n A 1 130 THR 130 150 150 THR THR A . n A 1 131 ASP 131 151 151 ASP ASP A . n A 1 132 LEU 132 152 152 LEU LEU A . n A 1 133 THR 133 153 153 THR THR A . n A 1 134 PHE 134 154 154 PHE PHE A . n A 1 135 GLU 135 155 155 GLU GLU A . n A 1 136 GLY 136 156 156 GLY GLY A . n A 1 137 ASN 137 157 157 ASN ASN A . n A 1 138 GLY 138 158 158 GLY GLY A . n A 1 139 ASP 139 159 159 ASP ASP A . n A 1 140 ALA 140 160 160 ALA ALA A . n A 1 141 THR 141 161 161 THR THR A . n A 1 142 TRP 142 162 162 TRP TRP A . n A 1 143 VAL 143 163 163 VAL VAL A . n A 1 144 PHE 144 164 164 PHE PHE A . n A 1 145 GLN 145 165 165 GLN GLN A . n A 1 146 ILE 146 166 166 ILE ILE A . n A 1 147 ALA 147 167 167 ALA ALA A . n A 1 148 GLY 148 168 168 GLY GLY A . n A 1 149 GLY 149 169 169 GLY GLY A . n A 1 150 LEU 150 170 170 LEU LEU A . n A 1 151 SER 151 171 171 SER SER A . n A 1 152 LEU 152 172 172 LEU LEU A . n A 1 153 ALA 153 173 173 ALA ALA A . n A 1 154 ASP 154 174 174 ASP ASP A . n A 1 155 GLY 155 175 175 GLY GLY A . n A 1 156 VAL 156 176 176 VAL VAL A . n A 1 157 ALA 157 177 177 ALA ALA A . n A 1 158 PHE 158 178 178 PHE PHE A . n A 1 159 THR 159 179 179 THR THR A . n A 1 160 LEU 160 180 180 LEU LEU A . n A 1 161 ALA 161 181 181 ALA ALA A . n A 1 162 GLY 162 182 182 GLY GLY A . n A 1 163 GLY 163 183 183 GLY GLY A . n A 1 164 ALA 164 184 184 ALA ALA A . n A 1 165 ASN 165 185 185 ASN ASN A . n A 1 166 SER 166 186 186 SER SER A . n A 1 167 THR 167 187 187 THR THR A . n A 1 168 ASN 168 188 188 ASN ASN A . n A 1 169 ILE 169 189 189 ILE ILE A . n A 1 170 ALA 170 190 190 ALA ALA A . n A 1 171 PHE 171 191 191 PHE PHE A . n A 1 172 GLN 172 192 192 GLN GLN A . n A 1 173 VAL 173 193 193 VAL VAL A . n A 1 174 GLY 174 194 194 GLY GLY A . n A 1 175 ASP 175 195 195 ASP ASP A . n A 1 176 ASP 176 196 196 ASP ASP A . n A 1 177 VAL 177 197 197 VAL VAL A . n A 1 178 THR 178 198 198 THR THR A . n A 1 179 VAL 179 199 199 VAL VAL A . n A 1 180 GLY 180 200 200 GLY GLY A . n A 1 181 LYS 181 201 201 LYS LYS A . n A 1 182 GLY 182 202 202 GLY GLY A . n A 1 183 ALA 183 203 203 ALA ALA A . n A 1 184 HIS 184 204 204 HIS HIS A . n A 1 185 PHE 185 205 205 PHE PHE A . n A 1 186 GLU 186 206 206 GLU GLU A . n A 1 187 GLY 187 207 207 GLY GLY A . n A 1 188 VAL 188 208 208 VAL VAL A . n A 1 189 LEU 189 209 209 LEU LEU A . n A 1 190 LEU 190 210 210 LEU LEU A . n A 1 191 ALA 191 211 211 ALA ALA A . n A 1 192 LYS 192 212 212 LYS LYS A . n A 1 193 ARG 193 213 213 ARG ARG A . n A 1 194 PHE 194 214 214 PHE PHE A . n A 1 195 VAL 195 215 215 VAL VAL A . n A 1 196 THR 196 216 216 THR THR A . n A 1 197 LEU 197 217 217 LEU LEU A . n A 1 198 GLN 198 218 218 GLN GLN A . n A 1 199 THR 199 219 219 THR THR A . n A 1 200 GLY 200 220 220 GLY GLY A . n A 1 201 SER 201 221 221 SER SER A . n A 1 202 SER 202 222 222 SER SER A . n A 1 203 LEU 203 223 223 LEU LEU A . n A 1 204 ASN 204 224 224 ASN ASN A . n A 1 205 GLY 205 225 225 GLY GLY A . n A 1 206 ARG 206 226 226 ARG ARG A . n A 1 207 VAL 207 227 227 VAL VAL A . n A 1 208 LEU 208 228 228 LEU LEU A . n A 1 209 SER 209 229 229 SER SER A . n A 1 210 GLN 210 230 230 GLN GLN A . n A 1 211 THR 211 231 231 THR THR A . n A 1 212 GLU 212 232 232 GLU GLU A . n A 1 213 VAL 213 233 233 VAL VAL A . n A 1 214 ALA 214 234 234 ALA ALA A . n A 1 215 LEU 215 235 235 LEU LEU A . n A 1 216 GLN 216 236 236 GLN GLN A . n A 1 217 LYS 217 237 237 LYS LYS A . n A 1 218 ALA 218 238 238 ALA ALA A . n A 1 219 THR 219 239 239 THR THR A . n A 1 220 VAL 220 240 240 VAL VAL A . n A 1 221 ASN 221 241 241 ASN ASN A . n A 1 222 SER 222 242 242 SER SER A . n A 1 223 PRO 223 243 243 PRO PRO A . n A 1 224 PHE 224 244 244 PHE PHE A . n A 1 225 VAL 225 245 245 VAL VAL A . n A 1 226 PRO 226 246 246 PRO PRO A . n A 1 227 ALA 227 247 247 ALA ALA A . n A 1 228 PRO 228 248 248 PRO PRO A . n A 1 229 GLU 229 249 249 GLU GLU A . n A 1 230 VAL 230 250 250 VAL VAL A . n A 1 231 VAL 231 251 251 VAL VAL A . n A 1 232 GLN 232 252 252 GLN GLN A . n A 1 233 LYS 233 253 ? ? ? A . n A 1 234 ARG 234 254 ? ? ? A . n A 1 235 SER 235 255 ? ? ? A . n A 1 236 ASN 236 256 ? ? ? A . n A 1 237 ALA 237 257 ? ? ? A . n A 1 238 ARG 238 258 ? ? ? A . n A 1 239 GLN 239 259 ? ? ? A . n A 1 240 TRP 240 260 ? ? ? A . n A 1 241 LEU 241 261 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 401 1 HOH HOH A . C 3 HOH 2 402 2 HOH HOH A . C 3 HOH 3 403 3 HOH HOH A . C 3 HOH 4 404 4 HOH HOH A . C 3 HOH 5 405 5 HOH HOH A . C 3 HOH 6 406 6 HOH HOH A . C 3 HOH 7 407 7 HOH HOH A . C 3 HOH 8 408 8 HOH HOH A . C 3 HOH 9 409 9 HOH HOH A . C 3 HOH 10 410 10 HOH HOH A . C 3 HOH 11 411 11 HOH HOH A . C 3 HOH 12 412 12 HOH HOH A . C 3 HOH 13 413 13 HOH HOH A . C 3 HOH 14 414 14 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id ASN _pdbx_struct_mod_residue.label_seq_id 165 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id ASN _pdbx_struct_mod_residue.auth_seq_id 185 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id ASN _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3430 ? 1 MORE -2 ? 1 'SSA (A^2)' 19260 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 12_544 x,x-y-1,-z-1/6 0.5000000000 0.8660254038 0.0000000000 29.3200000000 0.8660254038 -0.5000000000 0.0000000000 -50.7837296779 0.0000000000 0.0000000000 -1.0000000000 -48.7735000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 409 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-02-29 2 'Structure model' 1 1 2020-06-24 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-11-08 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Derived calculations' 4 3 'Structure model' Advisory 5 3 'Structure model' 'Atomic model' 6 3 'Structure model' 'Data collection' 7 3 'Structure model' 'Derived calculations' 8 3 'Structure model' 'Structure summary' 9 4 'Structure model' 'Data collection' 10 4 'Structure model' 'Database references' 11 4 'Structure model' 'Refinement description' 12 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp 2 2 'Structure model' database_PDB_caveat 3 2 'Structure model' struct_conn 4 3 'Structure model' atom_site 5 3 'Structure model' chem_comp 6 3 'Structure model' database_PDB_caveat 7 3 'Structure model' entity 8 3 'Structure model' pdbx_branch_scheme 9 3 'Structure model' pdbx_chem_comp_identifier 10 3 'Structure model' pdbx_entity_branch 11 3 'Structure model' pdbx_entity_branch_descriptor 12 3 'Structure model' pdbx_entity_branch_link 13 3 'Structure model' pdbx_entity_branch_list 14 3 'Structure model' pdbx_entity_nonpoly 15 3 'Structure model' pdbx_nonpoly_scheme 16 3 'Structure model' pdbx_struct_assembly_gen 17 3 'Structure model' pdbx_struct_special_symmetry 18 3 'Structure model' pdbx_validate_chiral 19 3 'Structure model' pdbx_validate_close_contact 20 3 'Structure model' struct_asym 21 3 'Structure model' struct_conn 22 3 'Structure model' struct_site 23 3 'Structure model' struct_site_gen 24 4 'Structure model' chem_comp 25 4 'Structure model' chem_comp_atom 26 4 'Structure model' chem_comp_bond 27 4 'Structure model' database_2 28 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_chem_comp.type' 2 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 3 3 'Structure model' '_atom_site.auth_asym_id' 4 3 'Structure model' '_atom_site.auth_seq_id' 5 3 'Structure model' '_atom_site.label_asym_id' 6 3 'Structure model' '_atom_site.label_entity_id' 7 3 'Structure model' '_chem_comp.name' 8 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 9 3 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id' 10 3 'Structure model' '_pdbx_validate_chiral.auth_asym_id' 11 3 'Structure model' '_pdbx_validate_chiral.auth_seq_id' 12 3 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 13 3 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 14 3 'Structure model' '_struct_conn.pdbx_dist_value' 15 3 'Structure model' '_struct_conn.pdbx_role' 16 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 17 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 23 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 27 4 'Structure model' '_chem_comp.pdbx_synonyms' 28 4 'Structure model' '_database_2.pdbx_DOI' 29 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal 'PROTEUM PLUS' 'data collection' PLUS ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.5.0110 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 ND2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 185 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O5 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 NAG _pdbx_validate_close_contact.auth_seq_id_2 1 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.95 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 72 ? ? -105.49 -143.81 2 1 ASP A 119 ? ? 57.63 72.17 3 1 ALA A 127 ? ? 48.12 27.47 4 1 ASP A 132 ? ? 31.23 38.55 5 1 SER A 144 ? ? -114.23 -165.96 6 1 ASP A 151 ? ? -35.13 143.25 7 1 ARG A 213 ? ? -124.76 -140.94 8 1 THR A 231 ? ? -123.45 -96.70 9 1 LYS A 237 ? ? 37.29 51.67 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C1 ? B NAG 2 ? 'WRONG HAND' . 2 1 C1 ? B MAN 4 ? 'WRONG HAND' . # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id SER _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 73 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id OG _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id SER _pdbx_unobs_or_zero_occ_atoms.label_seq_id 53 _pdbx_unobs_or_zero_occ_atoms.label_atom_id OG # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 74 ? A SER 54 2 1 Y 1 A LYS 253 ? A LYS 233 3 1 Y 1 A ARG 254 ? A ARG 234 4 1 Y 1 A SER 255 ? A SER 235 5 1 Y 1 A ASN 256 ? A ASN 236 6 1 Y 1 A ALA 257 ? A ALA 237 7 1 Y 1 A ARG 258 ? A ARG 238 8 1 Y 1 A GLN 259 ? A GLN 239 9 1 Y 1 A TRP 260 ? A TRP 240 10 1 Y 1 A LEU 261 ? A LEU 241 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MAN C1 C N S 240 MAN C2 C N S 241 MAN C3 C N S 242 MAN C4 C N S 243 MAN C5 C N R 244 MAN C6 C N N 245 MAN O1 O N N 246 MAN O2 O N N 247 MAN O3 O N N 248 MAN O4 O N N 249 MAN O5 O N N 250 MAN O6 O N N 251 MAN H1 H N N 252 MAN H2 H N N 253 MAN H3 H N N 254 MAN H4 H N N 255 MAN H5 H N N 256 MAN H61 H N N 257 MAN H62 H N N 258 MAN HO1 H N N 259 MAN HO2 H N N 260 MAN HO3 H N N 261 MAN HO4 H N N 262 MAN HO6 H N N 263 NAG C1 C N R 264 NAG C2 C N R 265 NAG C3 C N R 266 NAG C4 C N S 267 NAG C5 C N R 268 NAG C6 C N N 269 NAG C7 C N N 270 NAG C8 C N N 271 NAG N2 N N N 272 NAG O1 O N N 273 NAG O3 O N N 274 NAG O4 O N N 275 NAG O5 O N N 276 NAG O6 O N N 277 NAG O7 O N N 278 NAG H1 H N N 279 NAG H2 H N N 280 NAG H3 H N N 281 NAG H4 H N N 282 NAG H5 H N N 283 NAG H61 H N N 284 NAG H62 H N N 285 NAG H81 H N N 286 NAG H82 H N N 287 NAG H83 H N N 288 NAG HN2 H N N 289 NAG HO1 H N N 290 NAG HO3 H N N 291 NAG HO4 H N N 292 NAG HO6 H N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TRP N N N N 365 TRP CA C N S 366 TRP C C N N 367 TRP O O N N 368 TRP CB C N N 369 TRP CG C Y N 370 TRP CD1 C Y N 371 TRP CD2 C Y N 372 TRP NE1 N Y N 373 TRP CE2 C Y N 374 TRP CE3 C Y N 375 TRP CZ2 C Y N 376 TRP CZ3 C Y N 377 TRP CH2 C Y N 378 TRP OXT O N N 379 TRP H H N N 380 TRP H2 H N N 381 TRP HA H N N 382 TRP HB2 H N N 383 TRP HB3 H N N 384 TRP HD1 H N N 385 TRP HE1 H N N 386 TRP HE3 H N N 387 TRP HZ2 H N N 388 TRP HZ3 H N N 389 TRP HH2 H N N 390 TRP HXT H N N 391 TYR N N N N 392 TYR CA C N S 393 TYR C C N N 394 TYR O O N N 395 TYR CB C N N 396 TYR CG C Y N 397 TYR CD1 C Y N 398 TYR CD2 C Y N 399 TYR CE1 C Y N 400 TYR CE2 C Y N 401 TYR CZ C Y N 402 TYR OH O N N 403 TYR OXT O N N 404 TYR H H N N 405 TYR H2 H N N 406 TYR HA H N N 407 TYR HB2 H N N 408 TYR HB3 H N N 409 TYR HD1 H N N 410 TYR HD2 H N N 411 TYR HE1 H N N 412 TYR HE2 H N N 413 TYR HH H N N 414 TYR HXT H N N 415 VAL N N N N 416 VAL CA C N S 417 VAL C C N N 418 VAL O O N N 419 VAL CB C N N 420 VAL CG1 C N N 421 VAL CG2 C N N 422 VAL OXT O N N 423 VAL H H N N 424 VAL H2 H N N 425 VAL HA H N N 426 VAL HB H N N 427 VAL HG11 H N N 428 VAL HG12 H N N 429 VAL HG13 H N N 430 VAL HG21 H N N 431 VAL HG22 H N N 432 VAL HG23 H N N 433 VAL HXT H N N 434 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 GLN N CA sing N N 94 GLN N H sing N N 95 GLN N H2 sing N N 96 GLN CA C sing N N 97 GLN CA CB sing N N 98 GLN CA HA sing N N 99 GLN C O doub N N 100 GLN C OXT sing N N 101 GLN CB CG sing N N 102 GLN CB HB2 sing N N 103 GLN CB HB3 sing N N 104 GLN CG CD sing N N 105 GLN CG HG2 sing N N 106 GLN CG HG3 sing N N 107 GLN CD OE1 doub N N 108 GLN CD NE2 sing N N 109 GLN NE2 HE21 sing N N 110 GLN NE2 HE22 sing N N 111 GLN OXT HXT sing N N 112 GLU N CA sing N N 113 GLU N H sing N N 114 GLU N H2 sing N N 115 GLU CA C sing N N 116 GLU CA CB sing N N 117 GLU CA HA sing N N 118 GLU C O doub N N 119 GLU C OXT sing N N 120 GLU CB CG sing N N 121 GLU CB HB2 sing N N 122 GLU CB HB3 sing N N 123 GLU CG CD sing N N 124 GLU CG HG2 sing N N 125 GLU CG HG3 sing N N 126 GLU CD OE1 doub N N 127 GLU CD OE2 sing N N 128 GLU OE2 HE2 sing N N 129 GLU OXT HXT sing N N 130 GLY N CA sing N N 131 GLY N H sing N N 132 GLY N H2 sing N N 133 GLY CA C sing N N 134 GLY CA HA2 sing N N 135 GLY CA HA3 sing N N 136 GLY C O doub N N 137 GLY C OXT sing N N 138 GLY OXT HXT sing N N 139 HIS N CA sing N N 140 HIS N H sing N N 141 HIS N H2 sing N N 142 HIS CA C sing N N 143 HIS CA CB sing N N 144 HIS CA HA sing N N 145 HIS C O doub N N 146 HIS C OXT sing N N 147 HIS CB CG sing N N 148 HIS CB HB2 sing N N 149 HIS CB HB3 sing N N 150 HIS CG ND1 sing Y N 151 HIS CG CD2 doub Y N 152 HIS ND1 CE1 doub Y N 153 HIS ND1 HD1 sing N N 154 HIS CD2 NE2 sing Y N 155 HIS CD2 HD2 sing N N 156 HIS CE1 NE2 sing Y N 157 HIS CE1 HE1 sing N N 158 HIS NE2 HE2 sing N N 159 HIS OXT HXT sing N N 160 HOH O H1 sing N N 161 HOH O H2 sing N N 162 ILE N CA sing N N 163 ILE N H sing N N 164 ILE N H2 sing N N 165 ILE CA C sing N N 166 ILE CA CB sing N N 167 ILE CA HA sing N N 168 ILE C O doub N N 169 ILE C OXT sing N N 170 ILE CB CG1 sing N N 171 ILE CB CG2 sing N N 172 ILE CB HB sing N N 173 ILE CG1 CD1 sing N N 174 ILE CG1 HG12 sing N N 175 ILE CG1 HG13 sing N N 176 ILE CG2 HG21 sing N N 177 ILE CG2 HG22 sing N N 178 ILE CG2 HG23 sing N N 179 ILE CD1 HD11 sing N N 180 ILE CD1 HD12 sing N N 181 ILE CD1 HD13 sing N N 182 ILE OXT HXT sing N N 183 LEU N CA sing N N 184 LEU N H sing N N 185 LEU N H2 sing N N 186 LEU CA C sing N N 187 LEU CA CB sing N N 188 LEU CA HA sing N N 189 LEU C O doub N N 190 LEU C OXT sing N N 191 LEU CB CG sing N N 192 LEU CB HB2 sing N N 193 LEU CB HB3 sing N N 194 LEU CG CD1 sing N N 195 LEU CG CD2 sing N N 196 LEU CG HG sing N N 197 LEU CD1 HD11 sing N N 198 LEU CD1 HD12 sing N N 199 LEU CD1 HD13 sing N N 200 LEU CD2 HD21 sing N N 201 LEU CD2 HD22 sing N N 202 LEU CD2 HD23 sing N N 203 LEU OXT HXT sing N N 204 LYS N CA sing N N 205 LYS N H sing N N 206 LYS N H2 sing N N 207 LYS CA C sing N N 208 LYS CA CB sing N N 209 LYS CA HA sing N N 210 LYS C O doub N N 211 LYS C OXT sing N N 212 LYS CB CG sing N N 213 LYS CB HB2 sing N N 214 LYS CB HB3 sing N N 215 LYS CG CD sing N N 216 LYS CG HG2 sing N N 217 LYS CG HG3 sing N N 218 LYS CD CE sing N N 219 LYS CD HD2 sing N N 220 LYS CD HD3 sing N N 221 LYS CE NZ sing N N 222 LYS CE HE2 sing N N 223 LYS CE HE3 sing N N 224 LYS NZ HZ1 sing N N 225 LYS NZ HZ2 sing N N 226 LYS NZ HZ3 sing N N 227 LYS OXT HXT sing N N 228 MAN C1 C2 sing N N 229 MAN C1 O1 sing N N 230 MAN C1 O5 sing N N 231 MAN C1 H1 sing N N 232 MAN C2 C3 sing N N 233 MAN C2 O2 sing N N 234 MAN C2 H2 sing N N 235 MAN C3 C4 sing N N 236 MAN C3 O3 sing N N 237 MAN C3 H3 sing N N 238 MAN C4 C5 sing N N 239 MAN C4 O4 sing N N 240 MAN C4 H4 sing N N 241 MAN C5 C6 sing N N 242 MAN C5 O5 sing N N 243 MAN C5 H5 sing N N 244 MAN C6 O6 sing N N 245 MAN C6 H61 sing N N 246 MAN C6 H62 sing N N 247 MAN O1 HO1 sing N N 248 MAN O2 HO2 sing N N 249 MAN O3 HO3 sing N N 250 MAN O4 HO4 sing N N 251 MAN O6 HO6 sing N N 252 NAG C1 C2 sing N N 253 NAG C1 O1 sing N N 254 NAG C1 O5 sing N N 255 NAG C1 H1 sing N N 256 NAG C2 C3 sing N N 257 NAG C2 N2 sing N N 258 NAG C2 H2 sing N N 259 NAG C3 C4 sing N N 260 NAG C3 O3 sing N N 261 NAG C3 H3 sing N N 262 NAG C4 C5 sing N N 263 NAG C4 O4 sing N N 264 NAG C4 H4 sing N N 265 NAG C5 C6 sing N N 266 NAG C5 O5 sing N N 267 NAG C5 H5 sing N N 268 NAG C6 O6 sing N N 269 NAG C6 H61 sing N N 270 NAG C6 H62 sing N N 271 NAG C7 C8 sing N N 272 NAG C7 N2 sing N N 273 NAG C7 O7 doub N N 274 NAG C8 H81 sing N N 275 NAG C8 H82 sing N N 276 NAG C8 H83 sing N N 277 NAG N2 HN2 sing N N 278 NAG O1 HO1 sing N N 279 NAG O3 HO3 sing N N 280 NAG O4 HO4 sing N N 281 NAG O6 HO6 sing N N 282 PHE N CA sing N N 283 PHE N H sing N N 284 PHE N H2 sing N N 285 PHE CA C sing N N 286 PHE CA CB sing N N 287 PHE CA HA sing N N 288 PHE C O doub N N 289 PHE C OXT sing N N 290 PHE CB CG sing N N 291 PHE CB HB2 sing N N 292 PHE CB HB3 sing N N 293 PHE CG CD1 doub Y N 294 PHE CG CD2 sing Y N 295 PHE CD1 CE1 sing Y N 296 PHE CD1 HD1 sing N N 297 PHE CD2 CE2 doub Y N 298 PHE CD2 HD2 sing N N 299 PHE CE1 CZ doub Y N 300 PHE CE1 HE1 sing N N 301 PHE CE2 CZ sing Y N 302 PHE CE2 HE2 sing N N 303 PHE CZ HZ sing N N 304 PHE OXT HXT sing N N 305 PRO N CA sing N N 306 PRO N CD sing N N 307 PRO N H sing N N 308 PRO CA C sing N N 309 PRO CA CB sing N N 310 PRO CA HA sing N N 311 PRO C O doub N N 312 PRO C OXT sing N N 313 PRO CB CG sing N N 314 PRO CB HB2 sing N N 315 PRO CB HB3 sing N N 316 PRO CG CD sing N N 317 PRO CG HG2 sing N N 318 PRO CG HG3 sing N N 319 PRO CD HD2 sing N N 320 PRO CD HD3 sing N N 321 PRO OXT HXT sing N N 322 SER N CA sing N N 323 SER N H sing N N 324 SER N H2 sing N N 325 SER CA C sing N N 326 SER CA CB sing N N 327 SER CA HA sing N N 328 SER C O doub N N 329 SER C OXT sing N N 330 SER CB OG sing N N 331 SER CB HB2 sing N N 332 SER CB HB3 sing N N 333 SER OG HG sing N N 334 SER OXT HXT sing N N 335 THR N CA sing N N 336 THR N H sing N N 337 THR N H2 sing N N 338 THR CA C sing N N 339 THR CA CB sing N N 340 THR CA HA sing N N 341 THR C O doub N N 342 THR C OXT sing N N 343 THR CB OG1 sing N N 344 THR CB CG2 sing N N 345 THR CB HB sing N N 346 THR OG1 HG1 sing N N 347 THR CG2 HG21 sing N N 348 THR CG2 HG22 sing N N 349 THR CG2 HG23 sing N N 350 THR OXT HXT sing N N 351 TRP N CA sing N N 352 TRP N H sing N N 353 TRP N H2 sing N N 354 TRP CA C sing N N 355 TRP CA CB sing N N 356 TRP CA HA sing N N 357 TRP C O doub N N 358 TRP C OXT sing N N 359 TRP CB CG sing N N 360 TRP CB HB2 sing N N 361 TRP CB HB3 sing N N 362 TRP CG CD1 doub Y N 363 TRP CG CD2 sing Y N 364 TRP CD1 NE1 sing Y N 365 TRP CD1 HD1 sing N N 366 TRP CD2 CE2 doub Y N 367 TRP CD2 CE3 sing Y N 368 TRP NE1 CE2 sing Y N 369 TRP NE1 HE1 sing N N 370 TRP CE2 CZ2 sing Y N 371 TRP CE3 CZ3 doub Y N 372 TRP CE3 HE3 sing N N 373 TRP CZ2 CH2 doub Y N 374 TRP CZ2 HZ2 sing N N 375 TRP CZ3 CH2 sing Y N 376 TRP CZ3 HZ3 sing N N 377 TRP CH2 HH2 sing N N 378 TRP OXT HXT sing N N 379 TYR N CA sing N N 380 TYR N H sing N N 381 TYR N H2 sing N N 382 TYR CA C sing N N 383 TYR CA CB sing N N 384 TYR CA HA sing N N 385 TYR C O doub N N 386 TYR C OXT sing N N 387 TYR CB CG sing N N 388 TYR CB HB2 sing N N 389 TYR CB HB3 sing N N 390 TYR CG CD1 doub Y N 391 TYR CG CD2 sing Y N 392 TYR CD1 CE1 sing Y N 393 TYR CD1 HD1 sing N N 394 TYR CD2 CE2 doub Y N 395 TYR CD2 HD2 sing N N 396 TYR CE1 CZ doub Y N 397 TYR CE1 HE1 sing N N 398 TYR CE2 CZ sing Y N 399 TYR CE2 HE2 sing N N 400 TYR CZ OH sing N N 401 TYR OH HH sing N N 402 TYR OXT HXT sing N N 403 VAL N CA sing N N 404 VAL N H sing N N 405 VAL N H2 sing N N 406 VAL CA C sing N N 407 VAL CA CB sing N N 408 VAL CA HA sing N N 409 VAL C O doub N N 410 VAL C OXT sing N N 411 VAL CB CG1 sing N N 412 VAL CB CG2 sing N N 413 VAL CB HB sing N N 414 VAL CG1 HG11 sing N N 415 VAL CG1 HG12 sing N N 416 VAL CG1 HG13 sing N N 417 VAL CG2 HG21 sing N N 418 VAL CG2 HG22 sing N N 419 VAL CG2 HG23 sing N N 420 VAL OXT HXT sing N N 421 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 1299 n B 2 NAG 2 B NAG 2 A NAG 1300 n B 2 BMA 3 B BMA 3 A BMA 1301 n B 2 MAN 4 B MAN 4 A MAN 1302 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DManpa1-6DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3/a4-b1_b4-c1_c6-d1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(6+1)][b-D-Manp]{}}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 MAN C1 O1 3 BMA O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 MAN 4 n # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3UYU _pdbx_initial_refinement_model.details ? #