HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 20-DEC-11 3V7B TITLE DIP2269 PROTEIN FROM CORYNEBACTERIUM DIPHTHERIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM DIPHTHERIAE; SOURCE 3 ORGANISM_TAXID: 1717; SOURCE 4 STRAIN: NCTC13129; SOURCE 5 GENE: DIP2269; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,E.DUGGAN,S.CLANCY,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 3 08-NOV-17 3V7B 1 REMARK REVDAT 2 25-JAN-12 3V7B 1 SPRSDE REVDAT 1 11-JAN-12 3V7B 0 SPRSDE 25-JAN-12 3V7B 2I8G JRNL AUTH J.OSIPIUK,E.DUGGAN,S.CLANCY,A.JOACHIMIAK JRNL TITL DIP2269 PROTEIN FROM CORYNEBACTERIUM DIPHTHERIAE. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 25697 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1991 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.74 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1256 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 74.38 REMARK 3 BIN R VALUE (WORKING SET) : 0.3120 REMARK 3 BIN FREE R VALUE SET COUNT : 114 REMARK 3 BIN FREE R VALUE : 0.3320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2223 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 242 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.54000 REMARK 3 B22 (A**2) : -1.98000 REMARK 3 B33 (A**2) : 2.52000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.138 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.135 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.095 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.262 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2359 ; 0.020 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1583 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3236 ; 1.763 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3864 ; 1.001 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 306 ; 5.522 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 114 ;35.912 ;24.912 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 355 ;13.395 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;15.504 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 339 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2703 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 463 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 148 REMARK 3 ORIGIN FOR THE GROUP (A): 42.4398 16.4679 8.9707 REMARK 3 T TENSOR REMARK 3 T11: 0.0197 T22: 0.0055 REMARK 3 T33: 0.0164 T12: 0.0018 REMARK 3 T13: 0.0032 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.8557 L22: 1.1680 REMARK 3 L33: 0.3031 L12: -0.0039 REMARK 3 L13: -0.0788 L23: 0.0300 REMARK 3 S TENSOR REMARK 3 S11: -0.0305 S12: 0.0054 S13: 0.0213 REMARK 3 S21: 0.0240 S22: 0.0268 S23: -0.0247 REMARK 3 S31: 0.0003 S32: -0.0366 S33: 0.0037 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 148 REMARK 3 ORIGIN FOR THE GROUP (A): 17.7434 17.4428 25.9923 REMARK 3 T TENSOR REMARK 3 T11: 0.0151 T22: 0.0048 REMARK 3 T33: 0.0192 T12: 0.0044 REMARK 3 T13: 0.0080 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 1.0563 L22: 1.2242 REMARK 3 L33: 0.4625 L12: 0.3531 REMARK 3 L13: 0.2392 L23: 0.2996 REMARK 3 S TENSOR REMARK 3 S11: 0.0178 S12: -0.0166 S13: 0.0634 REMARK 3 S21: -0.0681 S22: -0.0244 S23: 0.0037 REMARK 3 S31: 0.0061 S32: -0.0325 S33: 0.0066 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 3V7B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000069685. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25734 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 36.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 12.00 REMARK 200 R MERGE (I) : 0.17300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.70400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.840 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, DM, SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4% PEG 8000, PH 8.0, 20 MM HEPES REMARK 280 BUFFER, 250 MM SODIUM CHLORIDE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 27.00100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.37600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.00100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.37600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 GLN B 17 REMARK 465 GLY B 18 REMARK 465 ARG B 19 REMARK 465 GLU B 20 REMARK 465 GLY B 21 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 184 O HOH A 221 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 230 O HOH A 281 3655 2.11 REMARK 500 OE2 GLU A 109 O HOH B 205 4556 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 32 CE2 TRP A 32 CD2 0.088 REMARK 500 HIS B 108 CG HIS B 108 CD2 0.067 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 59 -150.60 -112.51 REMARK 500 SER B 59 -151.22 -120.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC82926 RELATED DB: TARGETDB DBREF 3V7B A 2 148 UNP Q6NEK4 Q6NEK4_CORDI 2 148 DBREF 3V7B B 2 148 UNP Q6NEK4 Q6NEK4_CORDI 2 148 SEQADV 3V7B SER A -2 UNP Q6NEK4 EXPRESSION TAG SEQADV 3V7B ASN A -1 UNP Q6NEK4 EXPRESSION TAG SEQADV 3V7B ALA A 0 UNP Q6NEK4 EXPRESSION TAG SEQADV 3V7B MSE A 1 UNP Q6NEK4 EXPRESSION TAG SEQADV 3V7B SER B -2 UNP Q6NEK4 EXPRESSION TAG SEQADV 3V7B ASN B -1 UNP Q6NEK4 EXPRESSION TAG SEQADV 3V7B ALA B 0 UNP Q6NEK4 EXPRESSION TAG SEQADV 3V7B MSE B 1 UNP Q6NEK4 EXPRESSION TAG SEQRES 1 A 151 SER ASN ALA MSE VAL HIS ASP SER ALA LEU PRO PHE ASP SEQRES 2 A 151 ALA LEU PRO MSE PRO PRO GLN GLY ARG GLU GLY PHE GLU SEQRES 3 A 151 GLU CYS PRO TYR LEU ASP SER GLN TRP VAL ALA ASP THR SEQRES 4 A 151 ASN GLY GLN ARG MSE THR GLY GLN GLY VAL ASP THR ARG SEQRES 5 A 151 PHE ASP THR PRO ALA CYS VAL PHE TRP SER TYR PRO GLU SEQRES 6 A 151 ALA PRO GLN ALA THR VAL MSE VAL ARG HIS MSE PRO SER SEQRES 7 A 151 GLU GLU GLU ALA ILE ARG VAL VAL ASP TRP ALA ALA PRO SEQRES 8 A 151 ILE ASP THR THR GLU PRO ALA GLU GLU PRO ASP GLY TRP SEQRES 9 A 151 SER GLY GLY ARG ALA GLY HIS GLU GLU GLY ALA VAL TYR SEQRES 10 A 151 ALA VAL GLN LYS GLY PRO VAL ALA VAL VAL VAL TRP SER SEQRES 11 A 151 ASN GLN GLN GLN SER LEU LYS ALA GLU LEU MSE ALA LYS SEQRES 12 A 151 GLU ALA ILE ALA ARG LEU GLY LEU SEQRES 1 B 151 SER ASN ALA MSE VAL HIS ASP SER ALA LEU PRO PHE ASP SEQRES 2 B 151 ALA LEU PRO MSE PRO PRO GLN GLY ARG GLU GLY PHE GLU SEQRES 3 B 151 GLU CYS PRO TYR LEU ASP SER GLN TRP VAL ALA ASP THR SEQRES 4 B 151 ASN GLY GLN ARG MSE THR GLY GLN GLY VAL ASP THR ARG SEQRES 5 B 151 PHE ASP THR PRO ALA CYS VAL PHE TRP SER TYR PRO GLU SEQRES 6 B 151 ALA PRO GLN ALA THR VAL MSE VAL ARG HIS MSE PRO SER SEQRES 7 B 151 GLU GLU GLU ALA ILE ARG VAL VAL ASP TRP ALA ALA PRO SEQRES 8 B 151 ILE ASP THR THR GLU PRO ALA GLU GLU PRO ASP GLY TRP SEQRES 9 B 151 SER GLY GLY ARG ALA GLY HIS GLU GLU GLY ALA VAL TYR SEQRES 10 B 151 ALA VAL GLN LYS GLY PRO VAL ALA VAL VAL VAL TRP SER SEQRES 11 B 151 ASN GLN GLN GLN SER LEU LYS ALA GLU LEU MSE ALA LYS SEQRES 12 B 151 GLU ALA ILE ALA ARG LEU GLY LEU MODRES 3V7B MSE A 14 MET SELENOMETHIONINE MODRES 3V7B MSE A 41 MET SELENOMETHIONINE MODRES 3V7B MSE A 69 MET SELENOMETHIONINE MODRES 3V7B MSE A 73 MET SELENOMETHIONINE MODRES 3V7B MSE A 138 MET SELENOMETHIONINE MODRES 3V7B MSE B 14 MET SELENOMETHIONINE MODRES 3V7B MSE B 41 MET SELENOMETHIONINE MODRES 3V7B MSE B 69 MET SELENOMETHIONINE MODRES 3V7B MSE B 73 MET SELENOMETHIONINE MODRES 3V7B MSE B 138 MET SELENOMETHIONINE HET MSE A 14 13 HET MSE A 41 8 HET MSE A 69 8 HET MSE A 73 8 HET MSE A 138 8 HET MSE B 14 13 HET MSE B 41 8 HET MSE B 69 8 HET MSE B 73 8 HET MSE B 138 8 HET EDO A 401 4 HET EDO B 402 4 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 EDO 2(C2 H6 O2) FORMUL 5 HOH *242(H2 O) HELIX 1 1 HIS A 3 LEU A 7 5 5 HELIX 2 2 GLN A 17 GLY A 21 5 5 HELIX 3 3 ASP A 29 GLY A 38 1 10 HELIX 4 4 SER A 75 ALA A 87 1 13 HELIX 5 5 GLN A 131 GLY A 147 1 17 HELIX 6 6 HIS B 3 LEU B 7 5 5 HELIX 7 7 ASP B 29 GLY B 38 1 10 HELIX 8 8 SER B 75 ALA B 87 1 13 HELIX 9 9 GLN B 131 GLY B 147 1 17 SHEET 1 A 7 GLY A 43 ASP A 47 0 SHEET 2 A 7 ALA A 54 TRP A 58 -1 O TRP A 58 N GLY A 43 SHEET 3 A 7 ALA A 66 HIS A 72 -1 O VAL A 68 N CYS A 55 SHEET 4 A 7 VAL A 121 SER A 127 -1 O ALA A 122 N ARG A 71 SHEET 5 A 7 GLY A 111 LYS A 118 -1 N TYR A 114 O VAL A 125 SHEET 6 A 7 SER A 102 HIS A 108 -1 N GLY A 104 O ALA A 115 SHEET 7 A 7 GLU A 93 ALA A 95 -1 N GLU A 93 O ARG A 105 SHEET 1 B 7 GLY B 43 ASP B 47 0 SHEET 2 B 7 ALA B 54 TRP B 58 -1 O TRP B 58 N GLY B 43 SHEET 3 B 7 ALA B 66 HIS B 72 -1 O VAL B 68 N CYS B 55 SHEET 4 B 7 VAL B 121 SER B 127 -1 O ALA B 122 N ARG B 71 SHEET 5 B 7 GLY B 111 LYS B 118 -1 N VAL B 116 O VAL B 123 SHEET 6 B 7 SER B 102 HIS B 108 -1 N GLY B 104 O ALA B 115 SHEET 7 B 7 GLU B 93 ALA B 95 -1 N GLU B 93 O ARG B 105 SSBOND 1 CYS A 25 CYS A 55 1555 1555 2.12 SSBOND 2 CYS B 25 CYS B 55 1555 1555 2.19 LINK C PRO A 13 N MSE A 14 1555 1555 1.32 LINK C MSE A 14 N PRO A 15 1555 1555 1.33 LINK C ARG A 40 N MSE A 41 1555 1555 1.33 LINK C MSE A 41 N THR A 42 1555 1555 1.31 LINK C VAL A 68 N MSE A 69 1555 1555 1.34 LINK C MSE A 69 N VAL A 70 1555 1555 1.34 LINK C HIS A 72 N MSE A 73 1555 1555 1.32 LINK C MSE A 73 N PRO A 74 1555 1555 1.35 LINK C LEU A 137 N MSE A 138 1555 1555 1.33 LINK C MSE A 138 N ALA A 139 1555 1555 1.33 LINK C PRO B 13 N MSE B 14 1555 1555 1.30 LINK C MSE B 14 N PRO B 15 1555 1555 1.34 LINK C ARG B 40 N MSE B 41 1555 1555 1.32 LINK C MSE B 41 N THR B 42 1555 1555 1.33 LINK C VAL B 68 N MSE B 69 1555 1555 1.34 LINK C MSE B 69 N VAL B 70 1555 1555 1.33 LINK C HIS B 72 N MSE B 73 1555 1555 1.31 LINK C MSE B 73 N PRO B 74 1555 1555 1.37 LINK C LEU B 137 N MSE B 138 1555 1555 1.31 LINK C MSE B 138 N ALA B 139 1555 1555 1.33 CISPEP 1 GLU A 97 PRO A 98 0 -8.60 CISPEP 2 GLU B 97 PRO B 98 0 0.48 SITE 1 AC1 5 PRO A 64 THR A 67 TRP A 126 HOH A 245 SITE 2 AC1 5 HOH A 257 SITE 1 AC2 6 PRO B 64 THR B 67 TRP B 126 HOH B 156 SITE 2 AC2 6 HOH B 195 HOH B 213 CRYST1 54.002 66.752 70.287 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018518 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014981 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014227 0.00000