data_3VA4 # _entry.id 3VA4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3VA4 pdb_00003va4 10.2210/pdb3va4/pdb RCSB RCSB069786 ? ? WWPDB D_1000069786 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-02-01 2 'Structure model' 1 1 2024-10-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_entry_details 5 2 'Structure model' pdbx_modification_feature 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 2 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3VA4 _pdbx_database_status.recvd_initial_deposition_date 2011-12-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3VA1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wu, H.H.' 1 'Wu, P.Y.' 2 'Huang, K.F.' 3 'Kao, Y.Y.' 4 'Tsai, M.D.' 5 # _citation.id primary _citation.title 'Structural Delineation of MDC1-FHA Domain Binding with CHK2-pThr68.' _citation.journal_abbrev Biochemistry _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year 2012 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22211259 _citation.pdbx_database_id_DOI 10.1021/bi201709w # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wu, H.H.' 1 ? primary 'Wu, P.Y.' 2 ? primary 'Huang, K.F.' 3 ? primary 'Kao, Y.Y.' 4 ? primary 'Tsai, M.D.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Mediator of DNA damage checkpoint protein 1' 14589.714 2 ? ? 'N-terminal FHA domain (UNP RESIDUES 29-139)' ? 2 polymer syn 'Serine/threonine-protein kinase Chk2' 1349.335 1 ? ? 'CHK2-pThr68 peptide (UNP RESIDUES 63-73)' ? 3 water nat water 18.015 153 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'CHK2 checkpoint homolog, Cds1 homolog, Hucds1, hCds1, Checkpoint kinase 2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGSSHHHHHHSSGLVPRGSHMEPIGQLRLFSGTHGPERDFPLYLGKNVVGRSPDCSVALPFPSISKQHAVIEISAWNKAP ILQDCGSLNGTQIVKPPRVLPPGVSHRLRDQELILFADFPCQYHRLDVPPPL ; ;MGSSHHHHHHSSGLVPRGSHMEPIGQLRLFSGTHGPERDFPLYLGKNVVGRSPDCSVALPFPSISKQHAVIEISAWNKAP ILQDCGSLNGTQIVKPPRVLPPGVSHRLRDQELILFADFPCQYHRLDVPPPL ; A,B ? 2 'polypeptide(L)' no yes 'LETVS(TPO)QELYS' LETVSTQELYS C ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 GLU n 1 23 PRO n 1 24 ILE n 1 25 GLY n 1 26 GLN n 1 27 LEU n 1 28 ARG n 1 29 LEU n 1 30 PHE n 1 31 SER n 1 32 GLY n 1 33 THR n 1 34 HIS n 1 35 GLY n 1 36 PRO n 1 37 GLU n 1 38 ARG n 1 39 ASP n 1 40 PHE n 1 41 PRO n 1 42 LEU n 1 43 TYR n 1 44 LEU n 1 45 GLY n 1 46 LYS n 1 47 ASN n 1 48 VAL n 1 49 VAL n 1 50 GLY n 1 51 ARG n 1 52 SER n 1 53 PRO n 1 54 ASP n 1 55 CYS n 1 56 SER n 1 57 VAL n 1 58 ALA n 1 59 LEU n 1 60 PRO n 1 61 PHE n 1 62 PRO n 1 63 SER n 1 64 ILE n 1 65 SER n 1 66 LYS n 1 67 GLN n 1 68 HIS n 1 69 ALA n 1 70 VAL n 1 71 ILE n 1 72 GLU n 1 73 ILE n 1 74 SER n 1 75 ALA n 1 76 TRP n 1 77 ASN n 1 78 LYS n 1 79 ALA n 1 80 PRO n 1 81 ILE n 1 82 LEU n 1 83 GLN n 1 84 ASP n 1 85 CYS n 1 86 GLY n 1 87 SER n 1 88 LEU n 1 89 ASN n 1 90 GLY n 1 91 THR n 1 92 GLN n 1 93 ILE n 1 94 VAL n 1 95 LYS n 1 96 PRO n 1 97 PRO n 1 98 ARG n 1 99 VAL n 1 100 LEU n 1 101 PRO n 1 102 PRO n 1 103 GLY n 1 104 VAL n 1 105 SER n 1 106 HIS n 1 107 ARG n 1 108 LEU n 1 109 ARG n 1 110 ASP n 1 111 GLN n 1 112 GLU n 1 113 LEU n 1 114 ILE n 1 115 LEU n 1 116 PHE n 1 117 ALA n 1 118 ASP n 1 119 PHE n 1 120 PRO n 1 121 CYS n 1 122 GLN n 1 123 TYR n 1 124 HIS n 1 125 ARG n 1 126 LEU n 1 127 ASP n 1 128 VAL n 1 129 PRO n 1 130 PRO n 1 131 PRO n 1 132 LEU n 2 1 LEU n 2 2 GLU n 2 3 THR n 2 4 VAL n 2 5 SER n 2 6 TPO n 2 7 GLN n 2 8 GLU n 2 9 LEU n 2 10 TYR n 2 11 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene MDC1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain Mouse _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details 'The peptide was chemically synthesized.' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TPO 'L-peptide linking' n PHOSPHOTHREONINE PHOSPHONOTHREONINE 'C4 H10 N O6 P' 199.099 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 8 ? ? ? A . n A 1 2 GLY 2 9 ? ? ? A . n A 1 3 SER 3 10 ? ? ? A . n A 1 4 SER 4 11 ? ? ? A . n A 1 5 HIS 5 12 ? ? ? A . n A 1 6 HIS 6 13 ? ? ? A . n A 1 7 HIS 7 14 ? ? ? A . n A 1 8 HIS 8 15 ? ? ? A . n A 1 9 HIS 9 16 ? ? ? A . n A 1 10 HIS 10 17 ? ? ? A . n A 1 11 SER 11 18 ? ? ? A . n A 1 12 SER 12 19 ? ? ? A . n A 1 13 GLY 13 20 ? ? ? A . n A 1 14 LEU 14 21 ? ? ? A . n A 1 15 VAL 15 22 ? ? ? A . n A 1 16 PRO 16 23 ? ? ? A . n A 1 17 ARG 17 24 ? ? ? A . n A 1 18 GLY 18 25 ? ? ? A . n A 1 19 SER 19 26 ? ? ? A . n A 1 20 HIS 20 27 27 HIS HIS A . n A 1 21 MET 21 28 28 MET MET A . n A 1 22 GLU 22 29 29 GLU GLU A . n A 1 23 PRO 23 30 30 PRO PRO A . n A 1 24 ILE 24 31 31 ILE ILE A . n A 1 25 GLY 25 32 32 GLY GLY A . n A 1 26 GLN 26 33 33 GLN GLN A . n A 1 27 LEU 27 34 34 LEU LEU A . n A 1 28 ARG 28 35 35 ARG ARG A . n A 1 29 LEU 29 36 36 LEU LEU A . n A 1 30 PHE 30 37 37 PHE PHE A . n A 1 31 SER 31 38 38 SER SER A . n A 1 32 GLY 32 39 39 GLY GLY A . n A 1 33 THR 33 40 40 THR THR A . n A 1 34 HIS 34 41 41 HIS HIS A . n A 1 35 GLY 35 42 42 GLY GLY A . n A 1 36 PRO 36 43 43 PRO PRO A . n A 1 37 GLU 37 44 44 GLU GLU A . n A 1 38 ARG 38 45 45 ARG ARG A . n A 1 39 ASP 39 46 46 ASP ASP A . n A 1 40 PHE 40 47 47 PHE PHE A . n A 1 41 PRO 41 48 48 PRO PRO A . n A 1 42 LEU 42 49 49 LEU LEU A . n A 1 43 TYR 43 50 50 TYR TYR A . n A 1 44 LEU 44 51 51 LEU LEU A . n A 1 45 GLY 45 52 52 GLY GLY A . n A 1 46 LYS 46 53 53 LYS LYS A . n A 1 47 ASN 47 54 54 ASN ASN A . n A 1 48 VAL 48 55 55 VAL VAL A . n A 1 49 VAL 49 56 56 VAL VAL A . n A 1 50 GLY 50 57 57 GLY GLY A . n A 1 51 ARG 51 58 58 ARG ARG A . n A 1 52 SER 52 59 59 SER SER A . n A 1 53 PRO 53 60 60 PRO PRO A . n A 1 54 ASP 54 61 61 ASP ASP A . n A 1 55 CYS 55 62 62 CYS CYS A . n A 1 56 SER 56 63 63 SER SER A . n A 1 57 VAL 57 64 64 VAL VAL A . n A 1 58 ALA 58 65 65 ALA ALA A . n A 1 59 LEU 59 66 66 LEU LEU A . n A 1 60 PRO 60 67 67 PRO PRO A . n A 1 61 PHE 61 68 68 PHE PHE A . n A 1 62 PRO 62 69 69 PRO PRO A . n A 1 63 SER 63 70 70 SER SER A . n A 1 64 ILE 64 71 71 ILE ILE A . n A 1 65 SER 65 72 72 SER SER A . n A 1 66 LYS 66 73 73 LYS LYS A . n A 1 67 GLN 67 74 74 GLN GLN A . n A 1 68 HIS 68 75 75 HIS HIS A . n A 1 69 ALA 69 76 76 ALA ALA A . n A 1 70 VAL 70 77 77 VAL VAL A . n A 1 71 ILE 71 78 78 ILE ILE A . n A 1 72 GLU 72 79 79 GLU GLU A . n A 1 73 ILE 73 80 80 ILE ILE A . n A 1 74 SER 74 81 81 SER SER A . n A 1 75 ALA 75 82 82 ALA ALA A . n A 1 76 TRP 76 83 83 TRP TRP A . n A 1 77 ASN 77 84 84 ASN ASN A . n A 1 78 LYS 78 85 85 LYS LYS A . n A 1 79 ALA 79 86 86 ALA ALA A . n A 1 80 PRO 80 87 87 PRO PRO A . n A 1 81 ILE 81 88 88 ILE ILE A . n A 1 82 LEU 82 89 89 LEU LEU A . n A 1 83 GLN 83 90 90 GLN GLN A . n A 1 84 ASP 84 91 91 ASP ASP A . n A 1 85 CYS 85 92 92 CYS CYS A . n A 1 86 GLY 86 93 93 GLY GLY A . n A 1 87 SER 87 94 94 SER SER A . n A 1 88 LEU 88 95 95 LEU LEU A . n A 1 89 ASN 89 96 96 ASN ASN A . n A 1 90 GLY 90 97 97 GLY GLY A . n A 1 91 THR 91 98 98 THR THR A . n A 1 92 GLN 92 99 99 GLN GLN A . n A 1 93 ILE 93 100 100 ILE ILE A . n A 1 94 VAL 94 101 101 VAL VAL A . n A 1 95 LYS 95 102 102 LYS LYS A . n A 1 96 PRO 96 103 103 PRO PRO A . n A 1 97 PRO 97 104 104 PRO PRO A . n A 1 98 ARG 98 105 105 ARG ARG A . n A 1 99 VAL 99 106 106 VAL VAL A . n A 1 100 LEU 100 107 107 LEU LEU A . n A 1 101 PRO 101 108 108 PRO PRO A . n A 1 102 PRO 102 109 109 PRO PRO A . n A 1 103 GLY 103 110 110 GLY GLY A . n A 1 104 VAL 104 111 111 VAL VAL A . n A 1 105 SER 105 112 112 SER SER A . n A 1 106 HIS 106 113 113 HIS HIS A . n A 1 107 ARG 107 114 114 ARG ARG A . n A 1 108 LEU 108 115 115 LEU LEU A . n A 1 109 ARG 109 116 116 ARG ARG A . n A 1 110 ASP 110 117 117 ASP ASP A . n A 1 111 GLN 111 118 118 GLN GLN A . n A 1 112 GLU 112 119 119 GLU GLU A . n A 1 113 LEU 113 120 120 LEU LEU A . n A 1 114 ILE 114 121 121 ILE ILE A . n A 1 115 LEU 115 122 122 LEU LEU A . n A 1 116 PHE 116 123 123 PHE PHE A . n A 1 117 ALA 117 124 124 ALA ALA A . n A 1 118 ASP 118 125 125 ASP ASP A . n A 1 119 PHE 119 126 126 PHE PHE A . n A 1 120 PRO 120 127 127 PRO PRO A . n A 1 121 CYS 121 128 128 CYS CYS A . n A 1 122 GLN 122 129 129 GLN GLN A . n A 1 123 TYR 123 130 130 TYR TYR A . n A 1 124 HIS 124 131 131 HIS HIS A . n A 1 125 ARG 125 132 132 ARG ARG A . n A 1 126 LEU 126 133 133 LEU LEU A . n A 1 127 ASP 127 134 134 ASP ASP A . n A 1 128 VAL 128 135 135 VAL VAL A . n A 1 129 PRO 129 136 136 PRO PRO A . n A 1 130 PRO 130 137 137 PRO PRO A . n A 1 131 PRO 131 138 ? ? ? A . n A 1 132 LEU 132 139 ? ? ? A . n B 2 1 LEU 1 -4 ? ? ? C . n B 2 2 GLU 2 -3 ? ? ? C . n B 2 3 THR 3 -2 ? ? ? C . n B 2 4 VAL 4 -1 -1 VAL VAL C . n B 2 5 SER 5 0 0 SER SER C . n B 2 6 TPO 6 1 1 TPO TPO C . n B 2 7 GLN 7 2 2 GLN GLN C . n B 2 8 GLU 8 3 3 GLU GLU C . n B 2 9 LEU 9 4 4 LEU LEU C . n B 2 10 TYR 10 5 5 TYR TYR C . n B 2 11 SER 11 6 6 SER SER C . n C 1 1 MET 1 8 ? ? ? B . n C 1 2 GLY 2 9 ? ? ? B . n C 1 3 SER 3 10 ? ? ? B . n C 1 4 SER 4 11 ? ? ? B . n C 1 5 HIS 5 12 ? ? ? B . n C 1 6 HIS 6 13 ? ? ? B . n C 1 7 HIS 7 14 ? ? ? B . n C 1 8 HIS 8 15 ? ? ? B . n C 1 9 HIS 9 16 ? ? ? B . n C 1 10 HIS 10 17 ? ? ? B . n C 1 11 SER 11 18 ? ? ? B . n C 1 12 SER 12 19 ? ? ? B . n C 1 13 GLY 13 20 ? ? ? B . n C 1 14 LEU 14 21 ? ? ? B . n C 1 15 VAL 15 22 ? ? ? B . n C 1 16 PRO 16 23 ? ? ? B . n C 1 17 ARG 17 24 ? ? ? B . n C 1 18 GLY 18 25 ? ? ? B . n C 1 19 SER 19 26 ? ? ? B . n C 1 20 HIS 20 27 ? ? ? B . n C 1 21 MET 21 28 28 MET MET B . n C 1 22 GLU 22 29 29 GLU GLU B . n C 1 23 PRO 23 30 30 PRO PRO B . n C 1 24 ILE 24 31 31 ILE ILE B . n C 1 25 GLY 25 32 32 GLY GLY B . n C 1 26 GLN 26 33 33 GLN GLN B . n C 1 27 LEU 27 34 34 LEU LEU B . n C 1 28 ARG 28 35 35 ARG ARG B . n C 1 29 LEU 29 36 36 LEU LEU B . n C 1 30 PHE 30 37 37 PHE PHE B . n C 1 31 SER 31 38 38 SER SER B . n C 1 32 GLY 32 39 39 GLY GLY B . n C 1 33 THR 33 40 40 THR THR B . n C 1 34 HIS 34 41 41 HIS HIS B . n C 1 35 GLY 35 42 42 GLY GLY B . n C 1 36 PRO 36 43 43 PRO PRO B . n C 1 37 GLU 37 44 44 GLU GLU B . n C 1 38 ARG 38 45 45 ARG ARG B . n C 1 39 ASP 39 46 46 ASP ASP B . n C 1 40 PHE 40 47 47 PHE PHE B . n C 1 41 PRO 41 48 48 PRO PRO B . n C 1 42 LEU 42 49 49 LEU LEU B . n C 1 43 TYR 43 50 50 TYR TYR B . n C 1 44 LEU 44 51 51 LEU LEU B . n C 1 45 GLY 45 52 52 GLY GLY B . n C 1 46 LYS 46 53 53 LYS LYS B . n C 1 47 ASN 47 54 54 ASN ASN B . n C 1 48 VAL 48 55 55 VAL VAL B . n C 1 49 VAL 49 56 56 VAL VAL B . n C 1 50 GLY 50 57 57 GLY GLY B . n C 1 51 ARG 51 58 58 ARG ARG B . n C 1 52 SER 52 59 59 SER SER B . n C 1 53 PRO 53 60 60 PRO PRO B . n C 1 54 ASP 54 61 61 ASP ASP B . n C 1 55 CYS 55 62 62 CYS CYS B . n C 1 56 SER 56 63 63 SER SER B . n C 1 57 VAL 57 64 64 VAL VAL B . n C 1 58 ALA 58 65 65 ALA ALA B . n C 1 59 LEU 59 66 66 LEU LEU B . n C 1 60 PRO 60 67 67 PRO PRO B . n C 1 61 PHE 61 68 68 PHE PHE B . n C 1 62 PRO 62 69 69 PRO PRO B . n C 1 63 SER 63 70 70 SER SER B . n C 1 64 ILE 64 71 71 ILE ILE B . n C 1 65 SER 65 72 72 SER SER B . n C 1 66 LYS 66 73 73 LYS LYS B . n C 1 67 GLN 67 74 74 GLN GLN B . n C 1 68 HIS 68 75 75 HIS HIS B . n C 1 69 ALA 69 76 76 ALA ALA B . n C 1 70 VAL 70 77 77 VAL VAL B . n C 1 71 ILE 71 78 78 ILE ILE B . n C 1 72 GLU 72 79 79 GLU GLU B . n C 1 73 ILE 73 80 80 ILE ILE B . n C 1 74 SER 74 81 81 SER SER B . n C 1 75 ALA 75 82 82 ALA ALA B . n C 1 76 TRP 76 83 83 TRP TRP B . n C 1 77 ASN 77 84 84 ASN ASN B . n C 1 78 LYS 78 85 85 LYS LYS B . n C 1 79 ALA 79 86 86 ALA ALA B . n C 1 80 PRO 80 87 87 PRO PRO B . n C 1 81 ILE 81 88 88 ILE ILE B . n C 1 82 LEU 82 89 89 LEU LEU B . n C 1 83 GLN 83 90 90 GLN GLN B . n C 1 84 ASP 84 91 91 ASP ASP B . n C 1 85 CYS 85 92 92 CYS CYS B . n C 1 86 GLY 86 93 93 GLY GLY B . n C 1 87 SER 87 94 94 SER SER B . n C 1 88 LEU 88 95 95 LEU LEU B . n C 1 89 ASN 89 96 96 ASN ASN B . n C 1 90 GLY 90 97 97 GLY GLY B . n C 1 91 THR 91 98 98 THR THR B . n C 1 92 GLN 92 99 99 GLN GLN B . n C 1 93 ILE 93 100 100 ILE ILE B . n C 1 94 VAL 94 101 101 VAL VAL B . n C 1 95 LYS 95 102 102 LYS LYS B . n C 1 96 PRO 96 103 103 PRO PRO B . n C 1 97 PRO 97 104 104 PRO PRO B . n C 1 98 ARG 98 105 105 ARG ARG B . n C 1 99 VAL 99 106 106 VAL VAL B . n C 1 100 LEU 100 107 107 LEU LEU B . n C 1 101 PRO 101 108 108 PRO PRO B . n C 1 102 PRO 102 109 109 PRO PRO B . n C 1 103 GLY 103 110 110 GLY GLY B . n C 1 104 VAL 104 111 111 VAL VAL B . n C 1 105 SER 105 112 112 SER SER B . n C 1 106 HIS 106 113 113 HIS HIS B . n C 1 107 ARG 107 114 114 ARG ARG B . n C 1 108 LEU 108 115 115 LEU LEU B . n C 1 109 ARG 109 116 116 ARG ARG B . n C 1 110 ASP 110 117 117 ASP ASP B . n C 1 111 GLN 111 118 118 GLN GLN B . n C 1 112 GLU 112 119 119 GLU GLU B . n C 1 113 LEU 113 120 120 LEU LEU B . n C 1 114 ILE 114 121 121 ILE ILE B . n C 1 115 LEU 115 122 122 LEU LEU B . n C 1 116 PHE 116 123 123 PHE PHE B . n C 1 117 ALA 117 124 124 ALA ALA B . n C 1 118 ASP 118 125 125 ASP ASP B . n C 1 119 PHE 119 126 126 PHE PHE B . n C 1 120 PRO 120 127 127 PRO PRO B . n C 1 121 CYS 121 128 128 CYS CYS B . n C 1 122 GLN 122 129 129 GLN GLN B . n C 1 123 TYR 123 130 130 TYR TYR B . n C 1 124 HIS 124 131 131 HIS HIS B . n C 1 125 ARG 125 132 132 ARG ARG B . n C 1 126 LEU 126 133 133 LEU LEU B . n C 1 127 ASP 127 134 134 ASP ASP B . n C 1 128 VAL 128 135 135 VAL VAL B . n C 1 129 PRO 129 136 ? ? ? B . n C 1 130 PRO 130 137 ? ? ? B . n C 1 131 PRO 131 138 ? ? ? B . n C 1 132 LEU 132 139 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 HOH 1 201 3 HOH HOH A . D 3 HOH 2 202 7 HOH HOH A . D 3 HOH 3 203 15 HOH HOH A . D 3 HOH 4 204 24 HOH HOH A . D 3 HOH 5 205 25 HOH HOH A . D 3 HOH 6 206 26 HOH HOH A . D 3 HOH 7 207 27 HOH HOH A . D 3 HOH 8 208 32 HOH HOH A . D 3 HOH 9 209 33 HOH HOH A . D 3 HOH 10 210 34 HOH HOH A . D 3 HOH 11 211 36 HOH HOH A . D 3 HOH 12 212 37 HOH HOH A . D 3 HOH 13 213 38 HOH HOH A . D 3 HOH 14 214 39 HOH HOH A . D 3 HOH 15 215 44 HOH HOH A . D 3 HOH 16 216 49 HOH HOH A . D 3 HOH 17 217 61 HOH HOH A . D 3 HOH 18 218 63 HOH HOH A . D 3 HOH 19 219 64 HOH HOH A . D 3 HOH 20 220 65 HOH HOH A . D 3 HOH 21 221 67 HOH HOH A . D 3 HOH 22 222 70 HOH HOH A . D 3 HOH 23 223 71 HOH HOH A . D 3 HOH 24 224 73 HOH HOH A . D 3 HOH 25 225 79 HOH HOH A . D 3 HOH 26 226 82 HOH HOH A . D 3 HOH 27 227 84 HOH HOH A . D 3 HOH 28 228 88 HOH HOH A . D 3 HOH 29 229 89 HOH HOH A . D 3 HOH 30 230 90 HOH HOH A . D 3 HOH 31 231 91 HOH HOH A . D 3 HOH 32 232 94 HOH HOH A . D 3 HOH 33 233 98 HOH HOH A . D 3 HOH 34 234 99 HOH HOH A . D 3 HOH 35 235 101 HOH HOH A . D 3 HOH 36 236 103 HOH HOH A . D 3 HOH 37 237 107 HOH HOH A . D 3 HOH 38 238 108 HOH HOH A . D 3 HOH 39 239 109 HOH HOH A . D 3 HOH 40 240 112 HOH HOH A . D 3 HOH 41 241 113 HOH HOH A . D 3 HOH 42 242 117 HOH HOH A . D 3 HOH 43 243 118 HOH HOH A . D 3 HOH 44 244 119 HOH HOH A . D 3 HOH 45 245 121 HOH HOH A . D 3 HOH 46 246 122 HOH HOH A . D 3 HOH 47 247 124 HOH HOH A . D 3 HOH 48 248 126 HOH HOH A . D 3 HOH 49 249 128 HOH HOH A . D 3 HOH 50 250 130 HOH HOH A . D 3 HOH 51 251 138 HOH HOH A . D 3 HOH 52 252 139 HOH HOH A . D 3 HOH 53 253 140 HOH HOH A . D 3 HOH 54 254 142 HOH HOH A . D 3 HOH 55 255 144 HOH HOH A . D 3 HOH 56 256 150 HOH HOH A . D 3 HOH 57 257 152 HOH HOH A . D 3 HOH 58 258 165 HOH HOH A . D 3 HOH 59 259 168 HOH HOH A . D 3 HOH 60 260 169 HOH HOH A . D 3 HOH 61 261 172 HOH HOH A . D 3 HOH 62 262 176 HOH HOH A . D 3 HOH 63 263 178 HOH HOH A . E 3 HOH 1 101 9 HOH HOH C . E 3 HOH 2 102 20 HOH HOH C . E 3 HOH 3 103 40 HOH HOH C . E 3 HOH 4 104 75 HOH HOH C . E 3 HOH 5 105 80 HOH HOH C . E 3 HOH 6 106 92 HOH HOH C . E 3 HOH 7 107 102 HOH HOH C . E 3 HOH 8 108 114 HOH HOH C . E 3 HOH 9 109 116 HOH HOH C . E 3 HOH 10 110 127 HOH HOH C . E 3 HOH 11 111 134 HOH HOH C . F 3 HOH 1 201 2 HOH HOH B . F 3 HOH 2 202 4 HOH HOH B . F 3 HOH 3 203 5 HOH HOH B . F 3 HOH 4 204 6 HOH HOH B . F 3 HOH 5 205 8 HOH HOH B . F 3 HOH 6 206 10 HOH HOH B . F 3 HOH 7 207 11 HOH HOH B . F 3 HOH 8 208 12 HOH HOH B . F 3 HOH 9 209 13 HOH HOH B . F 3 HOH 10 210 14 HOH HOH B . F 3 HOH 11 211 16 HOH HOH B . F 3 HOH 12 212 17 HOH HOH B . F 3 HOH 13 213 18 HOH HOH B . F 3 HOH 14 214 19 HOH HOH B . F 3 HOH 15 215 21 HOH HOH B . F 3 HOH 16 216 22 HOH HOH B . F 3 HOH 17 217 23 HOH HOH B . F 3 HOH 18 218 28 HOH HOH B . F 3 HOH 19 219 29 HOH HOH B . F 3 HOH 20 220 30 HOH HOH B . F 3 HOH 21 221 31 HOH HOH B . F 3 HOH 22 222 35 HOH HOH B . F 3 HOH 23 223 41 HOH HOH B . F 3 HOH 24 224 42 HOH HOH B . F 3 HOH 25 225 45 HOH HOH B . F 3 HOH 26 226 46 HOH HOH B . F 3 HOH 27 227 47 HOH HOH B . F 3 HOH 28 228 48 HOH HOH B . F 3 HOH 29 229 50 HOH HOH B . F 3 HOH 30 230 51 HOH HOH B . F 3 HOH 31 231 52 HOH HOH B . F 3 HOH 32 232 53 HOH HOH B . F 3 HOH 33 233 55 HOH HOH B . F 3 HOH 34 234 56 HOH HOH B . F 3 HOH 35 235 57 HOH HOH B . F 3 HOH 36 236 59 HOH HOH B . F 3 HOH 37 237 60 HOH HOH B . F 3 HOH 38 238 62 HOH HOH B . F 3 HOH 39 239 66 HOH HOH B . F 3 HOH 40 240 74 HOH HOH B . F 3 HOH 41 241 76 HOH HOH B . F 3 HOH 42 242 78 HOH HOH B . F 3 HOH 43 243 81 HOH HOH B . F 3 HOH 44 244 83 HOH HOH B . F 3 HOH 45 245 85 HOH HOH B . F 3 HOH 46 246 86 HOH HOH B . F 3 HOH 47 247 87 HOH HOH B . F 3 HOH 48 248 95 HOH HOH B . F 3 HOH 49 249 96 HOH HOH B . F 3 HOH 50 250 97 HOH HOH B . F 3 HOH 51 251 100 HOH HOH B . F 3 HOH 52 252 104 HOH HOH B . F 3 HOH 53 253 106 HOH HOH B . F 3 HOH 54 254 115 HOH HOH B . F 3 HOH 55 255 120 HOH HOH B . F 3 HOH 56 256 123 HOH HOH B . F 3 HOH 57 257 129 HOH HOH B . F 3 HOH 58 258 131 HOH HOH B . F 3 HOH 59 259 132 HOH HOH B . F 3 HOH 60 260 135 HOH HOH B . F 3 HOH 61 261 136 HOH HOH B . F 3 HOH 62 262 137 HOH HOH B . F 3 HOH 63 263 141 HOH HOH B . F 3 HOH 64 264 146 HOH HOH B . F 3 HOH 65 265 147 HOH HOH B . F 3 HOH 66 266 148 HOH HOH B . F 3 HOH 67 267 149 HOH HOH B . F 3 HOH 68 268 151 HOH HOH B . F 3 HOH 69 269 154 HOH HOH B . F 3 HOH 70 270 155 HOH HOH B . F 3 HOH 71 271 156 HOH HOH B . F 3 HOH 72 272 158 HOH HOH B . F 3 HOH 73 273 159 HOH HOH B . F 3 HOH 74 274 160 HOH HOH B . F 3 HOH 75 275 161 HOH HOH B . F 3 HOH 76 276 166 HOH HOH B . F 3 HOH 77 277 167 HOH HOH B . F 3 HOH 78 278 177 HOH HOH B . F 3 HOH 79 279 179 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SHELXS phasing . ? 2 REFMAC refinement 5.6.0117 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 3VA4 _cell.length_a 28.508 _cell.length_b 70.224 _cell.length_c 101.335 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3VA4 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3VA4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol 25.96 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 9.5 _exptl_crystal_grow.pdbx_details '1.26M (NH4)2SO4, 0.2M NaCl, 0.1M CHES, pH 9.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2011-03-05 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9762 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSRRC BEAMLINE BL13B1' _diffrn_source.pdbx_synchrotron_site NSRRC _diffrn_source.pdbx_synchrotron_beamline BL13B1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9762 # _reflns.entry_id 3VA4 _reflns.observed_criterion_sigma_I 3 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 57.72 _reflns.d_resolution_high 1.54 _reflns.number_obs 30878 _reflns.number_all 31096 _reflns.percent_possible_obs 99.3 _reflns.pdbx_Rmerge_I_obs 0.037 _reflns.pdbx_Rsym_value 0.037 _reflns.pdbx_netI_over_sigmaI 31.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.54 _reflns_shell.d_res_low 1.60 _reflns_shell.percent_possible_all 99.3 _reflns_shell.Rmerge_I_obs 0.508 _reflns_shell.pdbx_Rsym_value 0.508 _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.pdbx_redundancy 4.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3039 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3VA4 _refine.ls_number_reflns_obs 29179 _refine.ls_number_reflns_all 31042 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 1.54 _refine.ls_percent_reflns_obs 98.98 _refine.ls_R_factor_obs 0.16160 _refine.ls_R_factor_all 0.16160 _refine.ls_R_factor_R_work 0.15925 _refine.ls_R_factor_R_free 0.20465 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1546 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.969 _refine.correlation_coeff_Fo_to_Fc_free 0.958 _refine.B_iso_mean 23.648 _refine.aniso_B[1][1] -0.91 _refine.aniso_B[2][2] -0.01 _refine.aniso_B[3][3] 0.92 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.102 _refine.pdbx_overall_ESU_R_Free 0.083 _refine.overall_SU_ML 0.051 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.104 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1782 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 153 _refine_hist.number_atoms_total 1935 _refine_hist.d_res_high 1.54 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.022 0.019 ? 1833 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2.293 1.987 ? 2498 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.665 5.000 ? 224 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 39.372 23.250 ? 80 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 16.827 15.000 ? 291 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 23.767 15.000 ? 14 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.171 0.200 ? 272 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.015 0.022 ? 1414 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 7.855 3.000 ? 1833 ? 'X-RAY DIFFRACTION' r_sphericity_free 20.219 5.000 ? 62 ? 'X-RAY DIFFRACTION' r_sphericity_bonded 13.584 5.000 ? 1873 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.540 _refine_ls_shell.d_res_low 1.580 _refine_ls_shell.number_reflns_R_work 1951 _refine_ls_shell.R_factor_R_work 0.180 _refine_ls_shell.percent_reflns_obs 98.71 _refine_ls_shell.R_factor_R_free 0.261 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 109 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _database_PDB_matrix.entry_id 3VA4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3VA4 _struct.title 'Crystal structure of the mammalian MDC1 FHA domain complexed with CHK2 pThr68 peptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3VA4 _struct_keywords.pdbx_keywords 'CELL CYCLE' _struct_keywords.text 'CELL CYCLE, FHA domain, DNA-damage, CHK2 and MDC1 dimerization' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 3 ? E N N 3 ? F N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP MDC1_MOUSE Q5PSV9 1 ;EPIGQLRLFSGTHGPERDFPLYLGKNVVGRSPDCSVALPFPSISKQHAVIEISAWNKAPILQDCGSLNGTQIVKPPRVLP PGVSHRLRDQELILFADFPCQYHRLDVPPPL ; 29 ? 2 UNP CHK2_HUMAN O96017 2 LETVSTQELYS 63 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3VA4 A 22 ? 132 ? Q5PSV9 29 ? 139 ? 29 139 2 2 3VA4 C 1 ? 11 ? O96017 63 ? 73 ? -4 6 3 1 3VA4 B 22 ? 132 ? Q5PSV9 29 ? 139 ? 29 139 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3VA4 MET A 1 ? UNP Q5PSV9 ? ? 'expression tag' 8 1 1 3VA4 GLY A 2 ? UNP Q5PSV9 ? ? 'expression tag' 9 2 1 3VA4 SER A 3 ? UNP Q5PSV9 ? ? 'expression tag' 10 3 1 3VA4 SER A 4 ? UNP Q5PSV9 ? ? 'expression tag' 11 4 1 3VA4 HIS A 5 ? UNP Q5PSV9 ? ? 'expression tag' 12 5 1 3VA4 HIS A 6 ? UNP Q5PSV9 ? ? 'expression tag' 13 6 1 3VA4 HIS A 7 ? UNP Q5PSV9 ? ? 'expression tag' 14 7 1 3VA4 HIS A 8 ? UNP Q5PSV9 ? ? 'expression tag' 15 8 1 3VA4 HIS A 9 ? UNP Q5PSV9 ? ? 'expression tag' 16 9 1 3VA4 HIS A 10 ? UNP Q5PSV9 ? ? 'expression tag' 17 10 1 3VA4 SER A 11 ? UNP Q5PSV9 ? ? 'expression tag' 18 11 1 3VA4 SER A 12 ? UNP Q5PSV9 ? ? 'expression tag' 19 12 1 3VA4 GLY A 13 ? UNP Q5PSV9 ? ? 'expression tag' 20 13 1 3VA4 LEU A 14 ? UNP Q5PSV9 ? ? 'expression tag' 21 14 1 3VA4 VAL A 15 ? UNP Q5PSV9 ? ? 'expression tag' 22 15 1 3VA4 PRO A 16 ? UNP Q5PSV9 ? ? 'expression tag' 23 16 1 3VA4 ARG A 17 ? UNP Q5PSV9 ? ? 'expression tag' 24 17 1 3VA4 GLY A 18 ? UNP Q5PSV9 ? ? 'expression tag' 25 18 1 3VA4 SER A 19 ? UNP Q5PSV9 ? ? 'expression tag' 26 19 1 3VA4 HIS A 20 ? UNP Q5PSV9 ? ? 'expression tag' 27 20 1 3VA4 MET A 21 ? UNP Q5PSV9 ? ? 'expression tag' 28 21 3 3VA4 MET B 1 ? UNP Q5PSV9 ? ? 'expression tag' 8 22 3 3VA4 GLY B 2 ? UNP Q5PSV9 ? ? 'expression tag' 9 23 3 3VA4 SER B 3 ? UNP Q5PSV9 ? ? 'expression tag' 10 24 3 3VA4 SER B 4 ? UNP Q5PSV9 ? ? 'expression tag' 11 25 3 3VA4 HIS B 5 ? UNP Q5PSV9 ? ? 'expression tag' 12 26 3 3VA4 HIS B 6 ? UNP Q5PSV9 ? ? 'expression tag' 13 27 3 3VA4 HIS B 7 ? UNP Q5PSV9 ? ? 'expression tag' 14 28 3 3VA4 HIS B 8 ? UNP Q5PSV9 ? ? 'expression tag' 15 29 3 3VA4 HIS B 9 ? UNP Q5PSV9 ? ? 'expression tag' 16 30 3 3VA4 HIS B 10 ? UNP Q5PSV9 ? ? 'expression tag' 17 31 3 3VA4 SER B 11 ? UNP Q5PSV9 ? ? 'expression tag' 18 32 3 3VA4 SER B 12 ? UNP Q5PSV9 ? ? 'expression tag' 19 33 3 3VA4 GLY B 13 ? UNP Q5PSV9 ? ? 'expression tag' 20 34 3 3VA4 LEU B 14 ? UNP Q5PSV9 ? ? 'expression tag' 21 35 3 3VA4 VAL B 15 ? UNP Q5PSV9 ? ? 'expression tag' 22 36 3 3VA4 PRO B 16 ? UNP Q5PSV9 ? ? 'expression tag' 23 37 3 3VA4 ARG B 17 ? UNP Q5PSV9 ? ? 'expression tag' 24 38 3 3VA4 GLY B 18 ? UNP Q5PSV9 ? ? 'expression tag' 25 39 3 3VA4 SER B 19 ? UNP Q5PSV9 ? ? 'expression tag' 26 40 3 3VA4 HIS B 20 ? UNP Q5PSV9 ? ? 'expression tag' 27 41 3 3VA4 MET B 21 ? UNP Q5PSV9 ? ? 'expression tag' 28 42 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1970 ? 1 MORE -14 ? 1 'SSA (A^2)' 11710 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B SER 5 C ? ? ? 1_555 B TPO 6 N ? ? C SER 0 C TPO 1 1_555 ? ? ? ? ? ? ? 1.350 ? ? covale2 covale both ? B TPO 6 C ? ? ? 1_555 B GLN 7 N ? ? C TPO 1 C GLN 2 1_555 ? ? ? ? ? ? ? 1.359 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id TPO _pdbx_modification_feature.label_asym_id B _pdbx_modification_feature.label_seq_id 6 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id . _pdbx_modification_feature.modified_residue_label_asym_id . _pdbx_modification_feature.modified_residue_label_seq_id . _pdbx_modification_feature.modified_residue_label_alt_id . _pdbx_modification_feature.auth_comp_id TPO _pdbx_modification_feature.auth_asym_id C _pdbx_modification_feature.auth_seq_id 1 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id . _pdbx_modification_feature.modified_residue_auth_asym_id . _pdbx_modification_feature.modified_residue_auth_seq_id . _pdbx_modification_feature.modified_residue_PDB_ins_code . _pdbx_modification_feature.modified_residue_symmetry . _pdbx_modification_feature.comp_id_linking_atom . _pdbx_modification_feature.modified_residue_id_linking_atom . _pdbx_modification_feature.modified_residue_id THR _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id TPO _pdbx_modification_feature.type Phosphorylation _pdbx_modification_feature.category 'Named protein modification' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 95 A . ? LYS 102 A PRO 96 A ? PRO 103 A 1 -6.41 2 LYS 95 C . ? LYS 102 B PRO 96 C ? PRO 103 B 1 -9.62 3 ASP 127 C . ? ASP 134 B VAL 128 C ? VAL 135 B 1 14.34 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 5 ? C ? 6 ? D ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel D 1 2 ? parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 38 ? LEU A 42 ? ARG A 45 LEU A 49 A 2 GLY A 25 ? LEU A 29 ? GLY A 32 LEU A 36 A 3 PHE A 119 ? ARG A 125 ? PHE A 126 ARG A 132 A 4 LEU A 113 ? PHE A 116 ? LEU A 120 PHE A 123 A 5 THR A 91 ? ILE A 93 ? THR A 98 ILE A 100 A 6 ARG A 98 ? LEU A 100 ? ARG A 105 LEU A 107 B 1 VAL A 57 ? ALA A 58 ? VAL A 64 ALA A 65 B 2 GLY A 45 ? GLY A 50 ? GLY A 52 GLY A 57 B 3 ALA A 69 ? ILE A 73 ? ALA A 76 ILE A 80 B 4 ILE A 81 ? ASP A 84 ? ILE A 88 ASP A 91 B 5 HIS A 106 ? ARG A 107 ? HIS A 113 ARG A 114 C 1 ARG C 38 ? LEU C 42 ? ARG B 45 LEU B 49 C 2 GLY C 25 ? LEU C 29 ? GLY B 32 LEU B 36 C 3 PHE C 119 ? ARG C 125 ? PHE B 126 ARG B 132 C 4 LEU C 113 ? PHE C 116 ? LEU B 120 PHE B 123 C 5 THR C 91 ? ILE C 93 ? THR B 98 ILE B 100 C 6 ARG C 98 ? VAL C 99 ? ARG B 105 VAL B 106 D 1 VAL C 57 ? ALA C 58 ? VAL B 64 ALA B 65 D 2 GLY C 45 ? GLY C 50 ? GLY B 52 GLY B 57 D 3 ALA C 69 ? ILE C 73 ? ALA B 76 ILE B 80 D 4 ILE C 81 ? ASP C 84 ? ILE B 88 ASP B 91 D 5 HIS C 106 ? ARG C 107 ? HIS B 113 ARG B 114 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ARG A 38 ? O ARG A 45 N LEU A 29 ? N LEU A 36 A 2 3 N ARG A 28 ? N ARG A 35 O GLN A 122 ? O GLN A 129 A 3 4 O CYS A 121 ? O CYS A 128 N ILE A 114 ? N ILE A 121 A 4 5 O LEU A 115 ? O LEU A 122 N GLN A 92 ? N GLN A 99 A 5 6 N ILE A 93 ? N ILE A 100 O ARG A 98 ? O ARG A 105 B 1 2 O VAL A 57 ? O VAL A 64 N VAL A 48 ? N VAL A 55 B 2 3 N GLY A 45 ? N GLY A 52 O ILE A 73 ? O ILE A 80 B 3 4 N GLU A 72 ? N GLU A 79 O ILE A 81 ? O ILE A 88 B 4 5 N LEU A 82 ? N LEU A 89 O HIS A 106 ? O HIS A 113 C 1 2 O ARG C 38 ? O ARG B 45 N LEU C 29 ? N LEU B 36 C 2 3 N ARG C 28 ? N ARG B 35 O GLN C 122 ? O GLN B 129 C 3 4 O CYS C 121 ? O CYS B 128 N ILE C 114 ? N ILE B 121 C 4 5 O LEU C 115 ? O LEU B 122 N GLN C 92 ? N GLN B 99 C 5 6 N ILE C 93 ? N ILE B 100 O ARG C 98 ? O ARG B 105 D 1 2 O VAL C 57 ? O VAL B 64 N VAL C 48 ? N VAL B 55 D 2 3 N VAL C 49 ? N VAL B 56 O ALA C 69 ? O ALA B 76 D 3 4 N GLU C 72 ? N GLU B 79 O ILE C 81 ? O ILE B 88 D 4 5 N LEU C 82 ? N LEU B 89 O HIS C 106 ? O HIS B 113 # _pdbx_entry_details.entry_id 3VA4 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 N _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 MET _pdbx_validate_symm_contact.auth_seq_id_1 28 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 254 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_664 _pdbx_validate_symm_contact.dist 1.99 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CE2 A TRP 83 ? ? CD2 A TRP 83 ? ? 1.483 1.409 0.074 0.012 N 2 1 CE2 B TRP 83 ? ? CD2 B TRP 83 ? ? 1.490 1.409 0.081 0.012 N 3 1 CB B LYS 102 ? ? CG B LYS 102 ? ? 1.351 1.521 -0.170 0.027 N 4 1 CD B GLU 119 ? ? OE1 B GLU 119 ? ? 1.167 1.252 -0.085 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A LEU 34 ? ? CB A LEU 34 ? ? CG A LEU 34 ? ? 98.94 115.30 -16.36 2.30 N 2 1 NE B ARG 58 ? ? CZ B ARG 58 ? ? NH2 B ARG 58 ? ? 117.18 120.30 -3.12 0.50 N 3 1 NE B ARG 105 ? ? CZ B ARG 105 ? ? NH1 B ARG 105 ? ? 123.33 120.30 3.03 0.50 N 4 1 NE B ARG 105 ? ? CZ B ARG 105 ? ? NH2 B ARG 105 ? ? 117.07 120.30 -3.23 0.50 N 5 1 NE B ARG 116 ? ? CZ B ARG 116 ? ? NH1 B ARG 116 ? ? 125.86 120.30 5.56 0.50 N 6 1 NE B ARG 116 ? ? CZ B ARG 116 ? ? NH2 B ARG 116 ? ? 112.99 120.30 -7.31 0.50 N 7 1 CB B ASP 125 ? ? CG B ASP 125 ? ? OD1 B ASP 125 ? ? 125.39 118.30 7.09 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 124 ? ? 55.94 -126.83 2 1 TYR C 5 ? ? -126.31 -112.63 3 1 CYS B 92 ? ? -98.70 34.22 4 1 ALA B 124 ? ? 53.16 -123.43 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id TPO _pdbx_struct_mod_residue.label_seq_id 6 _pdbx_struct_mod_residue.auth_asym_id C _pdbx_struct_mod_residue.auth_comp_id TPO _pdbx_struct_mod_residue.auth_seq_id 1 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id THR _pdbx_struct_mod_residue.details PHOSPHOTHREONINE # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 19.3651 33.6512 26.1557 0.0307 0.0315 0.0114 -0.0124 -0.0080 -0.0016 1.0035 0.0132 1.1976 0.0097 0.3494 -0.0939 -0.0627 -0.0157 0.0784 -0.0259 0.0818 -0.0041 0.0007 0.0369 0.0101 'X-RAY DIFFRACTION' 2 ? refined 17.3051 36.3626 1.0532 0.0119 0.0099 0.0273 0.0054 0.0077 0.0017 0.9025 0.4103 0.5273 0.1643 0.0262 0.0129 0.0005 -0.0063 0.0058 -0.0240 0.0076 -0.0373 -0.0565 -0.0255 -0.0169 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 27 A 137 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 201 A 263 ? . . . . ? 'X-RAY DIFFRACTION' 3 2 B 28 B 135 ? . . . . ? 'X-RAY DIFFRACTION' 4 2 B 201 B 279 ? . . . . ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 8 ? A MET 1 2 1 Y 1 A GLY 9 ? A GLY 2 3 1 Y 1 A SER 10 ? A SER 3 4 1 Y 1 A SER 11 ? A SER 4 5 1 Y 1 A HIS 12 ? A HIS 5 6 1 Y 1 A HIS 13 ? A HIS 6 7 1 Y 1 A HIS 14 ? A HIS 7 8 1 Y 1 A HIS 15 ? A HIS 8 9 1 Y 1 A HIS 16 ? A HIS 9 10 1 Y 1 A HIS 17 ? A HIS 10 11 1 Y 1 A SER 18 ? A SER 11 12 1 Y 1 A SER 19 ? A SER 12 13 1 Y 1 A GLY 20 ? A GLY 13 14 1 Y 1 A LEU 21 ? A LEU 14 15 1 Y 1 A VAL 22 ? A VAL 15 16 1 Y 1 A PRO 23 ? A PRO 16 17 1 Y 1 A ARG 24 ? A ARG 17 18 1 Y 1 A GLY 25 ? A GLY 18 19 1 Y 1 A SER 26 ? A SER 19 20 1 Y 1 A PRO 138 ? A PRO 131 21 1 Y 1 A LEU 139 ? A LEU 132 22 1 Y 1 C LEU -4 ? B LEU 1 23 1 Y 1 C GLU -3 ? B GLU 2 24 1 Y 1 C THR -2 ? B THR 3 25 1 Y 1 B MET 8 ? C MET 1 26 1 Y 1 B GLY 9 ? C GLY 2 27 1 Y 1 B SER 10 ? C SER 3 28 1 Y 1 B SER 11 ? C SER 4 29 1 Y 1 B HIS 12 ? C HIS 5 30 1 Y 1 B HIS 13 ? C HIS 6 31 1 Y 1 B HIS 14 ? C HIS 7 32 1 Y 1 B HIS 15 ? C HIS 8 33 1 Y 1 B HIS 16 ? C HIS 9 34 1 Y 1 B HIS 17 ? C HIS 10 35 1 Y 1 B SER 18 ? C SER 11 36 1 Y 1 B SER 19 ? C SER 12 37 1 Y 1 B GLY 20 ? C GLY 13 38 1 Y 1 B LEU 21 ? C LEU 14 39 1 Y 1 B VAL 22 ? C VAL 15 40 1 Y 1 B PRO 23 ? C PRO 16 41 1 Y 1 B ARG 24 ? C ARG 17 42 1 Y 1 B GLY 25 ? C GLY 18 43 1 Y 1 B SER 26 ? C SER 19 44 1 Y 1 B HIS 27 ? C HIS 20 45 1 Y 1 B PRO 136 ? C PRO 129 46 1 Y 1 B PRO 137 ? C PRO 130 47 1 Y 1 B PRO 138 ? C PRO 131 48 1 Y 1 B LEU 139 ? C LEU 132 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TPO N N N N 321 TPO CA C N S 322 TPO CB C N R 323 TPO CG2 C N N 324 TPO OG1 O N N 325 TPO P P N N 326 TPO O1P O N N 327 TPO O2P O N N 328 TPO O3P O N N 329 TPO C C N N 330 TPO O O N N 331 TPO OXT O N N 332 TPO H H N N 333 TPO H2 H N N 334 TPO HA H N N 335 TPO HB H N N 336 TPO HG21 H N N 337 TPO HG22 H N N 338 TPO HG23 H N N 339 TPO HOP2 H N N 340 TPO HOP3 H N N 341 TPO HXT H N N 342 TRP N N N N 343 TRP CA C N S 344 TRP C C N N 345 TRP O O N N 346 TRP CB C N N 347 TRP CG C Y N 348 TRP CD1 C Y N 349 TRP CD2 C Y N 350 TRP NE1 N Y N 351 TRP CE2 C Y N 352 TRP CE3 C Y N 353 TRP CZ2 C Y N 354 TRP CZ3 C Y N 355 TRP CH2 C Y N 356 TRP OXT O N N 357 TRP H H N N 358 TRP H2 H N N 359 TRP HA H N N 360 TRP HB2 H N N 361 TRP HB3 H N N 362 TRP HD1 H N N 363 TRP HE1 H N N 364 TRP HE3 H N N 365 TRP HZ2 H N N 366 TRP HZ3 H N N 367 TRP HH2 H N N 368 TRP HXT H N N 369 TYR N N N N 370 TYR CA C N S 371 TYR C C N N 372 TYR O O N N 373 TYR CB C N N 374 TYR CG C Y N 375 TYR CD1 C Y N 376 TYR CD2 C Y N 377 TYR CE1 C Y N 378 TYR CE2 C Y N 379 TYR CZ C Y N 380 TYR OH O N N 381 TYR OXT O N N 382 TYR H H N N 383 TYR H2 H N N 384 TYR HA H N N 385 TYR HB2 H N N 386 TYR HB3 H N N 387 TYR HD1 H N N 388 TYR HD2 H N N 389 TYR HE1 H N N 390 TYR HE2 H N N 391 TYR HH H N N 392 TYR HXT H N N 393 VAL N N N N 394 VAL CA C N S 395 VAL C C N N 396 VAL O O N N 397 VAL CB C N N 398 VAL CG1 C N N 399 VAL CG2 C N N 400 VAL OXT O N N 401 VAL H H N N 402 VAL H2 H N N 403 VAL HA H N N 404 VAL HB H N N 405 VAL HG11 H N N 406 VAL HG12 H N N 407 VAL HG13 H N N 408 VAL HG21 H N N 409 VAL HG22 H N N 410 VAL HG23 H N N 411 VAL HXT H N N 412 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TPO N CA sing N N 306 TPO N H sing N N 307 TPO N H2 sing N N 308 TPO CA CB sing N N 309 TPO CA C sing N N 310 TPO CA HA sing N N 311 TPO CB CG2 sing N N 312 TPO CB OG1 sing N N 313 TPO CB HB sing N N 314 TPO CG2 HG21 sing N N 315 TPO CG2 HG22 sing N N 316 TPO CG2 HG23 sing N N 317 TPO OG1 P sing N N 318 TPO P O1P doub N N 319 TPO P O2P sing N N 320 TPO P O3P sing N N 321 TPO O2P HOP2 sing N N 322 TPO O3P HOP3 sing N N 323 TPO C O doub N N 324 TPO C OXT sing N N 325 TPO OXT HXT sing N N 326 TRP N CA sing N N 327 TRP N H sing N N 328 TRP N H2 sing N N 329 TRP CA C sing N N 330 TRP CA CB sing N N 331 TRP CA HA sing N N 332 TRP C O doub N N 333 TRP C OXT sing N N 334 TRP CB CG sing N N 335 TRP CB HB2 sing N N 336 TRP CB HB3 sing N N 337 TRP CG CD1 doub Y N 338 TRP CG CD2 sing Y N 339 TRP CD1 NE1 sing Y N 340 TRP CD1 HD1 sing N N 341 TRP CD2 CE2 doub Y N 342 TRP CD2 CE3 sing Y N 343 TRP NE1 CE2 sing Y N 344 TRP NE1 HE1 sing N N 345 TRP CE2 CZ2 sing Y N 346 TRP CE3 CZ3 doub Y N 347 TRP CE3 HE3 sing N N 348 TRP CZ2 CH2 doub Y N 349 TRP CZ2 HZ2 sing N N 350 TRP CZ3 CH2 sing Y N 351 TRP CZ3 HZ3 sing N N 352 TRP CH2 HH2 sing N N 353 TRP OXT HXT sing N N 354 TYR N CA sing N N 355 TYR N H sing N N 356 TYR N H2 sing N N 357 TYR CA C sing N N 358 TYR CA CB sing N N 359 TYR CA HA sing N N 360 TYR C O doub N N 361 TYR C OXT sing N N 362 TYR CB CG sing N N 363 TYR CB HB2 sing N N 364 TYR CB HB3 sing N N 365 TYR CG CD1 doub Y N 366 TYR CG CD2 sing Y N 367 TYR CD1 CE1 sing Y N 368 TYR CD1 HD1 sing N N 369 TYR CD2 CE2 doub Y N 370 TYR CD2 HD2 sing N N 371 TYR CE1 CZ doub Y N 372 TYR CE1 HE1 sing N N 373 TYR CE2 CZ sing Y N 374 TYR CE2 HE2 sing N N 375 TYR CZ OH sing N N 376 TYR OH HH sing N N 377 TYR OXT HXT sing N N 378 VAL N CA sing N N 379 VAL N H sing N N 380 VAL N H2 sing N N 381 VAL CA C sing N N 382 VAL CA CB sing N N 383 VAL CA HA sing N N 384 VAL C O doub N N 385 VAL C OXT sing N N 386 VAL CB CG1 sing N N 387 VAL CB CG2 sing N N 388 VAL CB HB sing N N 389 VAL CG1 HG11 sing N N 390 VAL CG1 HG12 sing N N 391 VAL CG1 HG13 sing N N 392 VAL CG2 HG21 sing N N 393 VAL CG2 HG22 sing N N 394 VAL CG2 HG23 sing N N 395 VAL OXT HXT sing N N 396 # _atom_sites.entry_id 3VA4 _atom_sites.fract_transf_matrix[1][1] 0.035078 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014240 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009868 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_