HEADER TRANSCRIPTION REGULATOR 30-DEC-11 3VB2 TITLE CRYSTAL STRUCTURE OF THE REDUCED FORM OF MARR FROM E.COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: MULTIPLE ANTIBIOTIC RESISTANCE PROTEIN MARR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: B1530, CFXB, INAR, JW5248, MARR, SOXQ; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS WINGED HELIX-TURN-HELIX DNA-BINDING MOTIF, TRANSCRIPTION REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR H.LOU,R.ZHU,Z.HAO REVDAT 2 20-MAR-24 3VB2 1 SEQADV REVDAT 1 30-JAN-13 3VB2 0 JRNL AUTH H.LOU,R.ZHU,Z.HAO JRNL TITL THE REDUCED FORM OF MARR STRUCTURE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 10739 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.245 REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 511 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 631 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.10 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE SET COUNT : 34 REMARK 3 BIN FREE R VALUE : 0.3210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2104 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 18 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 59.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.05000 REMARK 3 B22 (A**2) : 0.05000 REMARK 3 B33 (A**2) : -0.11000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.721 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.347 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.281 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 27.662 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.921 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.895 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2129 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2883 ; 0.681 ; 2.007 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 267 ; 6.869 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 81 ;40.638 ;24.938 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 416 ;17.896 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;16.054 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 360 ; 0.057 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1506 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 10 A 89 1 REMARK 3 1 B 10 B 89 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT THERMAL 1 A (A**2): 630 ; 6.980 ; 0.500 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 118 A 144 1 REMARK 3 1 B 118 B 144 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT THERMAL 2 A (A**2): 218 ; 3.330 ; 0.500 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 45 REMARK 3 ORIGIN FOR THE GROUP (A): 19.6590 8.1960 11.7760 REMARK 3 T TENSOR REMARK 3 T11: 0.3739 T22: 0.3530 REMARK 3 T33: 0.2252 T12: 0.0178 REMARK 3 T13: 0.0574 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 8.7129 L22: 4.5181 REMARK 3 L33: 6.6254 L12: 4.3607 REMARK 3 L13: -6.5035 L23: -3.7880 REMARK 3 S TENSOR REMARK 3 S11: -0.1050 S12: 0.8424 S13: -0.3176 REMARK 3 S21: -0.4255 S22: 0.2160 S23: -0.1742 REMARK 3 S31: 0.3039 S32: -0.5782 S33: -0.1109 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 46 A 82 REMARK 3 ORIGIN FOR THE GROUP (A): 34.3810 19.2120 12.4220 REMARK 3 T TENSOR REMARK 3 T11: 0.4583 T22: 0.3569 REMARK 3 T33: 0.2864 T12: 0.0102 REMARK 3 T13: 0.0352 T23: -0.0231 REMARK 3 L TENSOR REMARK 3 L11: 6.5069 L22: 8.5574 REMARK 3 L33: 8.9205 L12: -0.7370 REMARK 3 L13: -1.4767 L23: -0.7389 REMARK 3 S TENSOR REMARK 3 S11: -0.2307 S12: -0.6648 S13: -0.5646 REMARK 3 S21: 0.9321 S22: -0.0376 S23: -0.3165 REMARK 3 S31: 1.0898 S32: 0.6663 S33: 0.2683 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 83 A 99 REMARK 3 ORIGIN FOR THE GROUP (A): 40.7860 27.9360 11.6130 REMARK 3 T TENSOR REMARK 3 T11: 0.5304 T22: 0.5753 REMARK 3 T33: 0.5812 T12: -0.2027 REMARK 3 T13: -0.0054 T23: -0.1323 REMARK 3 L TENSOR REMARK 3 L11: 43.1874 L22: 12.1874 REMARK 3 L33: 19.7866 L12: 13.4836 REMARK 3 L13: 18.8514 L23: 3.5270 REMARK 3 S TENSOR REMARK 3 S11: -0.0408 S12: -0.1639 S13: 0.7468 REMARK 3 S21: 0.9936 S22: -0.0202 S23: -1.4313 REMARK 3 S31: -1.4052 S32: 1.3885 S33: 0.0610 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 100 A 112 REMARK 3 ORIGIN FOR THE GROUP (A): 22.5150 26.3290 7.5380 REMARK 3 T TENSOR REMARK 3 T11: 0.5785 T22: 0.3939 REMARK 3 T33: 0.2278 T12: 0.0142 REMARK 3 T13: 0.0828 T23: -0.0629 REMARK 3 L TENSOR REMARK 3 L11: 33.1886 L22: 21.4137 REMARK 3 L33: 2.0363 L12: 16.0228 REMARK 3 L13: -7.1730 L23: -4.0297 REMARK 3 S TENSOR REMARK 3 S11: 0.7053 S12: -1.1441 S13: -0.6343 REMARK 3 S21: 0.8035 S22: -0.6572 S23: 0.4326 REMARK 3 S31: -0.0893 S32: 0.3056 S33: -0.0481 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 113 A 144 REMARK 3 ORIGIN FOR THE GROUP (A): 8.9220 13.3840 19.8860 REMARK 3 T TENSOR REMARK 3 T11: 0.3513 T22: 0.2578 REMARK 3 T33: 0.3416 T12: -0.0197 REMARK 3 T13: 0.0708 T23: 0.0734 REMARK 3 L TENSOR REMARK 3 L11: 10.2914 L22: 5.8165 REMARK 3 L33: 14.2179 L12: 0.9742 REMARK 3 L13: 5.2774 L23: -0.3006 REMARK 3 S TENSOR REMARK 3 S11: -0.0332 S12: 0.7907 S13: 0.1491 REMARK 3 S21: -0.0888 S22: 0.3112 S23: 0.3503 REMARK 3 S31: -0.4368 S32: 0.4351 S33: -0.2780 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 6 B 58 REMARK 3 ORIGIN FOR THE GROUP (A): 25.4060 5.0320 21.6990 REMARK 3 T TENSOR REMARK 3 T11: 0.3041 T22: 0.3944 REMARK 3 T33: 0.2301 T12: -0.0966 REMARK 3 T13: 0.0266 T23: 0.0151 REMARK 3 L TENSOR REMARK 3 L11: 5.4306 L22: 6.8452 REMARK 3 L33: 4.2702 L12: -2.1039 REMARK 3 L13: -2.0209 L23: 1.5968 REMARK 3 S TENSOR REMARK 3 S11: 0.0713 S12: 0.0867 S13: 0.4655 REMARK 3 S21: -0.0479 S22: 0.2453 S23: -0.9249 REMARK 3 S31: -0.0967 S32: 0.1096 S33: -0.3166 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 59 B 89 REMARK 3 ORIGIN FOR THE GROUP (A): 34.9090 -3.5780 8.7450 REMARK 3 T TENSOR REMARK 3 T11: 0.9079 T22: 0.7429 REMARK 3 T33: 0.8516 T12: -0.2675 REMARK 3 T13: 0.5418 T23: -0.0921 REMARK 3 L TENSOR REMARK 3 L11: 18.5218 L22: 11.4308 REMARK 3 L33: 11.9504 L12: 6.5009 REMARK 3 L13: -2.0007 L23: -3.9509 REMARK 3 S TENSOR REMARK 3 S11: 0.1088 S12: 1.3527 S13: 1.3112 REMARK 3 S21: -1.6050 S22: 0.9720 S23: -0.6476 REMARK 3 S31: -0.9284 S32: 0.6348 S33: -1.0807 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 96 B 144 REMARK 3 ORIGIN FOR THE GROUP (A): 20.4750 -2.2560 26.0100 REMARK 3 T TENSOR REMARK 3 T11: 0.4383 T22: 0.3613 REMARK 3 T33: 0.4070 T12: -0.0249 REMARK 3 T13: 0.0367 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 4.5431 L22: 3.9696 REMARK 3 L33: 1.6615 L12: -3.4012 REMARK 3 L13: -2.2709 L23: 1.5362 REMARK 3 S TENSOR REMARK 3 S11: 0.0697 S12: 0.0324 S13: 0.0186 REMARK 3 S21: 0.1037 S22: 0.1967 S23: -0.2073 REMARK 3 S31: 0.0765 S32: 0.1811 S33: -0.2664 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 3VB2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000069820. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JAN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 130 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.16 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10837 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 59.033 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09900 REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.49300 REMARK 200 R SYM FOR SHELL (I) : 0.49300 REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% TACSIMATE,0.1M HEPES, 10% PEG REMARK 280 5000MME, 0.3M NACL, PH 7.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.53000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 31.40000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 31.40000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.26500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 31.40000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 31.40000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 129.79500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 31.40000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.40000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 43.26500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 31.40000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.40000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 129.79500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 86.53000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 SER A 3 REMARK 465 THR A 4 REMARK 465 SER A 5 REMARK 465 ASP A 6 REMARK 465 LEU A 7 REMARK 465 PHE A 8 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 SER B 3 REMARK 465 THR B 4 REMARK 465 PRO B 90 REMARK 465 ASN B 91 REMARK 465 ASP B 92 REMARK 465 LYS B 93 REMARK 465 ARG B 94 REMARK 465 GLY B 95 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O TYR A 32 CG PRO A 35 7555 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 53 -63.26 69.66 REMARK 500 ASP A 92 -63.96 -97.71 REMARK 500 LYS A 93 -45.81 83.12 REMARK 500 GLN A 117 -78.40 -112.41 REMARK 500 ASP B 37 37.42 36.97 REMARK 500 ALA B 53 -68.52 72.39 REMARK 500 GLN B 117 -62.31 77.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3VN8 RELATED DB: PDB DBREF 3VB2 A 1 144 UNP P27245 MARR_ECOLI 1 144 DBREF 3VB2 B 1 144 UNP P27245 MARR_ECOLI 1 144 SEQADV 3VB2 SER A 47 UNP P27245 CYS 47 ENGINEERED MUTATION SEQADV 3VB2 SER A 51 UNP P27245 CYS 51 ENGINEERED MUTATION SEQADV 3VB2 SER A 54 UNP P27245 CYS 54 ENGINEERED MUTATION SEQADV 3VB2 SER A 80 UNP P27245 CYS 80 ENGINEERED MUTATION SEQADV 3VB2 SER A 108 UNP P27245 CYS 108 ENGINEERED MUTATION SEQADV 3VB2 SER A 111 UNP P27245 CYS 111 ENGINEERED MUTATION SEQADV 3VB2 SER B 47 UNP P27245 CYS 47 ENGINEERED MUTATION SEQADV 3VB2 SER B 51 UNP P27245 CYS 51 ENGINEERED MUTATION SEQADV 3VB2 SER B 54 UNP P27245 CYS 54 ENGINEERED MUTATION SEQADV 3VB2 SER B 80 UNP P27245 CYS 80 ENGINEERED MUTATION SEQADV 3VB2 SER B 108 UNP P27245 CYS 108 ENGINEERED MUTATION SEQADV 3VB2 SER B 111 UNP P27245 CYS 111 ENGINEERED MUTATION SEQRES 1 A 144 MET LYS SER THR SER ASP LEU PHE ASN GLU ILE ILE PRO SEQRES 2 A 144 LEU GLY ARG LEU ILE HIS MET VAL ASN GLN LYS LYS ASP SEQRES 3 A 144 ARG LEU LEU ASN GLU TYR LEU SER PRO LEU ASP ILE THR SEQRES 4 A 144 ALA ALA GLN PHE LYS VAL LEU SER SER ILE ARG SER ALA SEQRES 5 A 144 ALA SER ILE THR PRO VAL GLU LEU LYS LYS VAL LEU SER SEQRES 6 A 144 VAL ASP LEU GLY ALA LEU THR ARG MET LEU ASP ARG LEU SEQRES 7 A 144 VAL SER LYS GLY TRP VAL GLU ARG LEU PRO ASN PRO ASN SEQRES 8 A 144 ASP LYS ARG GLY VAL LEU VAL LYS LEU THR THR GLY GLY SEQRES 9 A 144 ALA ALA ILE SER GLU GLN SER HIS GLN LEU VAL GLY GLN SEQRES 10 A 144 ASP LEU HIS GLN GLU LEU THR LYS ASN LEU THR ALA ASP SEQRES 11 A 144 GLU VAL ALA THR LEU GLU TYR LEU LEU LYS LYS VAL LEU SEQRES 12 A 144 PRO SEQRES 1 B 144 MET LYS SER THR SER ASP LEU PHE ASN GLU ILE ILE PRO SEQRES 2 B 144 LEU GLY ARG LEU ILE HIS MET VAL ASN GLN LYS LYS ASP SEQRES 3 B 144 ARG LEU LEU ASN GLU TYR LEU SER PRO LEU ASP ILE THR SEQRES 4 B 144 ALA ALA GLN PHE LYS VAL LEU SER SER ILE ARG SER ALA SEQRES 5 B 144 ALA SER ILE THR PRO VAL GLU LEU LYS LYS VAL LEU SER SEQRES 6 B 144 VAL ASP LEU GLY ALA LEU THR ARG MET LEU ASP ARG LEU SEQRES 7 B 144 VAL SER LYS GLY TRP VAL GLU ARG LEU PRO ASN PRO ASN SEQRES 8 B 144 ASP LYS ARG GLY VAL LEU VAL LYS LEU THR THR GLY GLY SEQRES 9 B 144 ALA ALA ILE SER GLU GLN SER HIS GLN LEU VAL GLY GLN SEQRES 10 B 144 ASP LEU HIS GLN GLU LEU THR LYS ASN LEU THR ALA ASP SEQRES 11 B 144 GLU VAL ALA THR LEU GLU TYR LEU LEU LYS LYS VAL LEU SEQRES 12 B 144 PRO FORMUL 3 HOH *18(H2 O) HELIX 1 1 PRO A 13 LEU A 33 1 21 HELIX 2 2 SER A 34 ASP A 37 5 4 HELIX 3 3 THR A 39 ALA A 53 1 15 HELIX 4 4 THR A 56 SER A 65 1 10 HELIX 5 5 ASP A 67 LYS A 81 1 15 HELIX 6 6 THR A 101 GLU A 109 1 9 HELIX 7 7 GLN A 110 GLN A 117 1 8 HELIX 8 8 GLN A 117 THR A 124 1 8 HELIX 9 9 THR A 128 LEU A 143 1 16 HELIX 10 10 PRO B 13 SER B 34 1 22 HELIX 11 11 PRO B 35 ASP B 37 5 3 HELIX 12 12 THR B 39 ALA B 53 1 15 HELIX 13 13 THR B 56 SER B 65 1 10 HELIX 14 14 ASP B 67 LYS B 81 1 15 HELIX 15 15 THR B 101 GLY B 116 1 16 HELIX 16 16 GLN B 117 THR B 124 1 8 HELIX 17 17 THR B 128 LEU B 143 1 16 SHEET 1 A 3 SER A 54 ILE A 55 0 SHEET 2 A 3 VAL A 96 LEU A 100 -1 O VAL A 98 N ILE A 55 SHEET 3 A 3 VAL A 84 PRO A 88 -1 N LEU A 87 O LEU A 97 SHEET 1 B 3 SER B 54 ILE B 55 0 SHEET 2 B 3 LEU B 97 LEU B 100 -1 O VAL B 98 N ILE B 55 SHEET 3 B 3 VAL B 84 LEU B 87 -1 N GLU B 85 O LYS B 99 CRYST1 62.800 62.800 173.060 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015924 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015924 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005778 0.00000