data_3VDU # _entry.id 3VDU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3VDU pdb_00003vdu 10.2210/pdb3vdu/pdb RCSB RCSB069920 ? ? WWPDB D_1000069920 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3VDP 'The same protein, apo-form' unspecified PDB 3VDS 'The single point mutant tteRecR C55G of same protein' unspecified PDB 3VDT 'The double points mutant tteRecR C58G/C70G of same protein' unspecified PDB 3VE5 'The delete mutant of RecR protein' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3VDU _pdbx_database_status.recvd_initial_deposition_date 2012-01-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tang, Q.' 1 'Yan, X.X.' 2 'Liang, D.C.' 3 # _citation.id primary _citation.title 'RecOR complex including RecR N-N dimer and RecO monomer displays a high affinity for ssDNA' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 40 _citation.page_first 11115 _citation.page_last 11125 _citation.year 2012 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23019218 _citation.pdbx_database_id_DOI 10.1093/nar/gks889 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tang, Q.' 1 ? primary 'Gao, P.' 2 ? primary 'Liu, Y.P.' 3 ? primary 'Gao, A.' 4 ? primary 'An, X.M.' 5 ? primary 'Liu, S.' 6 ? primary 'Yan, X.X.' 7 ? primary 'Liang, D.C.' 8 ? # _cell.entry_id 3VDU _cell.length_a 66.848 _cell.length_b 123.729 _cell.length_c 135.203 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3VDU _symmetry.space_group_name_H-M 'F 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 22 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Recombination protein recR' 23563.145 1 ? K21G ? ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 water nat water 18.015 30 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RecR Recombinational DNA repair protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSHHHHHHSQDPMSYYSTSVAKLIEELSKLPGIGPGTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYCKICFNITDK EVCDICSDENRDHSTICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGPEDIRIKELLERVRDGSVKEVILATNPD IEGEATAMYIAKLLKPFGVKVTRIAHGIPVGGDLEYTDVVTLSKALEGRREV ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSHHHHHHSQDPMSYYSTSVAKLIEELSKLPGIGPGTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYCKICFNITDK EVCDICSDENRDHSTICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGPEDIRIKELLERVRDGSVKEVILATNPD IEGEATAMYIAKLLKPFGVKVTRIAHGIPVGGDLEYTDVVTLSKALEGRREV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 SER n 1 11 GLN n 1 12 ASP n 1 13 PRO n 1 14 MET n 1 15 SER n 1 16 TYR n 1 17 TYR n 1 18 SER n 1 19 THR n 1 20 SER n 1 21 VAL n 1 22 ALA n 1 23 LYS n 1 24 LEU n 1 25 ILE n 1 26 GLU n 1 27 GLU n 1 28 LEU n 1 29 SER n 1 30 LYS n 1 31 LEU n 1 32 PRO n 1 33 GLY n 1 34 ILE n 1 35 GLY n 1 36 PRO n 1 37 GLY n 1 38 THR n 1 39 ALA n 1 40 GLN n 1 41 ARG n 1 42 LEU n 1 43 ALA n 1 44 PHE n 1 45 PHE n 1 46 ILE n 1 47 ILE n 1 48 ASN n 1 49 MET n 1 50 PRO n 1 51 LEU n 1 52 ASP n 1 53 GLU n 1 54 VAL n 1 55 ARG n 1 56 SER n 1 57 LEU n 1 58 SER n 1 59 GLN n 1 60 ALA n 1 61 ILE n 1 62 ILE n 1 63 GLU n 1 64 ALA n 1 65 LYS n 1 66 GLU n 1 67 LYS n 1 68 LEU n 1 69 ARG n 1 70 TYR n 1 71 CYS n 1 72 LYS n 1 73 ILE n 1 74 CYS n 1 75 PHE n 1 76 ASN n 1 77 ILE n 1 78 THR n 1 79 ASP n 1 80 LYS n 1 81 GLU n 1 82 VAL n 1 83 CYS n 1 84 ASP n 1 85 ILE n 1 86 CYS n 1 87 SER n 1 88 ASP n 1 89 GLU n 1 90 ASN n 1 91 ARG n 1 92 ASP n 1 93 HIS n 1 94 SER n 1 95 THR n 1 96 ILE n 1 97 CYS n 1 98 VAL n 1 99 VAL n 1 100 SER n 1 101 HIS n 1 102 PRO n 1 103 MET n 1 104 ASP n 1 105 VAL n 1 106 VAL n 1 107 ALA n 1 108 MET n 1 109 GLU n 1 110 LYS n 1 111 VAL n 1 112 LYS n 1 113 GLU n 1 114 TYR n 1 115 LYS n 1 116 GLY n 1 117 VAL n 1 118 TYR n 1 119 HIS n 1 120 VAL n 1 121 LEU n 1 122 HIS n 1 123 GLY n 1 124 VAL n 1 125 ILE n 1 126 SER n 1 127 PRO n 1 128 ILE n 1 129 GLU n 1 130 GLY n 1 131 VAL n 1 132 GLY n 1 133 PRO n 1 134 GLU n 1 135 ASP n 1 136 ILE n 1 137 ARG n 1 138 ILE n 1 139 LYS n 1 140 GLU n 1 141 LEU n 1 142 LEU n 1 143 GLU n 1 144 ARG n 1 145 VAL n 1 146 ARG n 1 147 ASP n 1 148 GLY n 1 149 SER n 1 150 VAL n 1 151 LYS n 1 152 GLU n 1 153 VAL n 1 154 ILE n 1 155 LEU n 1 156 ALA n 1 157 THR n 1 158 ASN n 1 159 PRO n 1 160 ASP n 1 161 ILE n 1 162 GLU n 1 163 GLY n 1 164 GLU n 1 165 ALA n 1 166 THR n 1 167 ALA n 1 168 MET n 1 169 TYR n 1 170 ILE n 1 171 ALA n 1 172 LYS n 1 173 LEU n 1 174 LEU n 1 175 LYS n 1 176 PRO n 1 177 PHE n 1 178 GLY n 1 179 VAL n 1 180 LYS n 1 181 VAL n 1 182 THR n 1 183 ARG n 1 184 ILE n 1 185 ALA n 1 186 HIS n 1 187 GLY n 1 188 ILE n 1 189 PRO n 1 190 VAL n 1 191 GLY n 1 192 GLY n 1 193 ASP n 1 194 LEU n 1 195 GLU n 1 196 TYR n 1 197 THR n 1 198 ASP n 1 199 VAL n 1 200 VAL n 1 201 THR n 1 202 LEU n 1 203 SER n 1 204 LYS n 1 205 ALA n 1 206 LEU n 1 207 GLU n 1 208 GLY n 1 209 ARG n 1 210 ARG n 1 211 GLU n 1 212 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene recR _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain MB4 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermoanaerobacter tengcongensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 273068 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RECR_THETN _struct_ref.pdbx_db_accession Q8RDI4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSYYSTSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYCKICFNITDKEVCDICSDENRDH STICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGPEDIRIKELLERVRDGSVKEVILATNPDIEGEATAMYIAKL LKPFGVKVTRIAHGIPVGGDLEYTDVVTLSKALEGRREV ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3VDU _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 14 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 212 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8RDI4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 199 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -2 _struct_ref_seq.pdbx_auth_seq_align_end 196 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3VDU GLY A 1 ? UNP Q8RDI4 ? ? 'expression tag' -15 1 1 3VDU SER A 2 ? UNP Q8RDI4 ? ? 'expression tag' -14 2 1 3VDU SER A 3 ? UNP Q8RDI4 ? ? 'expression tag' -13 3 1 3VDU HIS A 4 ? UNP Q8RDI4 ? ? 'expression tag' -12 4 1 3VDU HIS A 5 ? UNP Q8RDI4 ? ? 'expression tag' -11 5 1 3VDU HIS A 6 ? UNP Q8RDI4 ? ? 'expression tag' -10 6 1 3VDU HIS A 7 ? UNP Q8RDI4 ? ? 'expression tag' -9 7 1 3VDU HIS A 8 ? UNP Q8RDI4 ? ? 'expression tag' -8 8 1 3VDU HIS A 9 ? UNP Q8RDI4 ? ? 'expression tag' -7 9 1 3VDU SER A 10 ? UNP Q8RDI4 ? ? 'expression tag' -6 10 1 3VDU GLN A 11 ? UNP Q8RDI4 ? ? 'expression tag' -5 11 1 3VDU ASP A 12 ? UNP Q8RDI4 ? ? 'expression tag' -4 12 1 3VDU PRO A 13 ? UNP Q8RDI4 ? ? 'expression tag' -3 13 1 3VDU GLY A 37 ? UNP Q8RDI4 LYS 24 'engineered mutation' 21 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 3VDU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.97 _exptl_crystal.density_percent_sol 58.53 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details ;8%(w/v) PEG4000, 200mM Ammonium Sulfate, 10%(v/v) 2-Propanol, 100mM HEPES Sodium Salt, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9875 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.pdbx_synchrotron_site SSRF _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9875 # _reflns.entry_id 3VDU _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20 _reflns.d_resolution_high 2.7 _reflns.number_obs 6949 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 68.930 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3VDU _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 2.8000 _refine.ls_d_res_low 19.7240 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 92.6700 _refine.ls_number_reflns_obs 6557 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2248 _refine.ls_R_factor_R_work 0.2230 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2598 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.7700 _refine.ls_number_reflns_R_free 313 _refine.ls_number_reflns_R_work 6244 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 86.2895 _refine.solvent_model_param_bsol 80.0000 _refine.solvent_model_param_ksol 0.3130 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 53.8245 _refine.aniso_B[2][2] -26.1432 _refine.aniso_B[3][3] -18.3896 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.3000 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.0000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.7200 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 3VDP _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.7004 _refine.B_iso_max 186.920 _refine.B_iso_min 46.720 _refine.pdbx_overall_phase_error 34.3100 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_diffrn_id 1 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1488 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 30 _refine_hist.number_atoms_total 1519 _refine_hist.d_res_high 2.8000 _refine_hist.d_res_low 19.7240 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 1510 0.012 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 2044 1.543 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 243 0.092 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 262 0.005 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 559 18.376 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 2.8000 3.5244 2 89.0000 2979 . 0.3005 0.3541 . 136 . 3115 . 'X-RAY DIFFRACTION' . 3.5244 19.7247 2 96.0000 3265 . 0.2002 0.2346 . 177 . 3442 . 'X-RAY DIFFRACTION' . # _struct.entry_id 3VDU _struct.title 'Structure of recombination mediator protein RecRK21G mutant' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3VDU _struct_keywords.pdbx_keywords RECOMBINATION _struct_keywords.text 'Zinc Finger, DNA repair, DNA binding, RECOMBINATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 18 ? LYS A 30 ? SER A 2 LYS A 14 1 ? 13 HELX_P HELX_P2 2 GLY A 35 ? MET A 49 ? GLY A 19 MET A 33 1 ? 15 HELX_P HELX_P3 3 PRO A 50 ? LEU A 68 ? PRO A 34 LEU A 52 1 ? 19 HELX_P HELX_P4 4 PRO A 102 ? LYS A 110 ? PRO A 86 LYS A 94 1 ? 9 HELX_P HELX_P5 5 ILE A 138 ? ASP A 147 ? ILE A 122 ASP A 131 1 ? 10 HELX_P HELX_P6 6 ALA A 165 ? LYS A 175 ? ALA A 149 LYS A 159 1 ? 11 HELX_P HELX_P7 7 ASP A 198 ? GLY A 208 ? ASP A 182 GLY A 192 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 71 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 55 A ZN 201 1_555 ? ? ? ? ? ? ? 2.384 ? ? metalc2 metalc ? ? A CYS 74 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 58 A ZN 201 1_555 ? ? ? ? ? ? ? 2.357 ? ? metalc3 metalc ? ? A CYS 83 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 67 A ZN 201 1_555 ? ? ? ? ? ? ? 2.465 ? ? metalc4 metalc ? ? A CYS 86 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 70 A ZN 201 1_555 ? ? ? ? ? ? ? 2.189 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 69 ? TYR A 70 ? ARG A 53 TYR A 54 A 2 ILE A 77 ? THR A 78 ? ILE A 61 THR A 62 B 1 GLY A 116 ? VAL A 120 ? GLY A 100 VAL A 104 B 2 ASP A 92 ? VAL A 99 ? ASP A 76 VAL A 83 B 3 GLU A 152 ? LEU A 155 ? GLU A 136 LEU A 139 B 4 LYS A 180 ? ARG A 183 ? LYS A 164 ARG A 167 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 69 ? N ARG A 53 O THR A 78 ? O THR A 62 B 1 2 O VAL A 117 ? O VAL A 101 N THR A 95 ? N THR A 79 B 2 3 N ILE A 96 ? N ILE A 80 O GLU A 152 ? O GLU A 136 B 3 4 N LEU A 155 ? N LEU A 139 O THR A 182 ? O THR A 166 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id ZN _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE ZN A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 71 ? CYS A 55 . ? 1_555 ? 2 AC1 4 CYS A 74 ? CYS A 58 . ? 1_555 ? 3 AC1 4 CYS A 83 ? CYS A 67 . ? 1_555 ? 4 AC1 4 CYS A 86 ? CYS A 70 . ? 1_555 ? # _database_PDB_matrix.entry_id 3VDU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3VDU _atom_sites.fract_transf_matrix[1][1] 0.014959 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008082 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007396 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -15 ? ? ? A . n A 1 2 SER 2 -14 ? ? ? A . n A 1 3 SER 3 -13 ? ? ? A . n A 1 4 HIS 4 -12 ? ? ? A . n A 1 5 HIS 5 -11 ? ? ? A . n A 1 6 HIS 6 -10 ? ? ? A . n A 1 7 HIS 7 -9 ? ? ? A . n A 1 8 HIS 8 -8 ? ? ? A . n A 1 9 HIS 9 -7 ? ? ? A . n A 1 10 SER 10 -6 ? ? ? A . n A 1 11 GLN 11 -5 ? ? ? A . n A 1 12 ASP 12 -4 ? ? ? A . n A 1 13 PRO 13 -3 ? ? ? A . n A 1 14 MET 14 -2 ? ? ? A . n A 1 15 SER 15 -1 ? ? ? A . n A 1 16 TYR 16 0 0 TYR TYR A . n A 1 17 TYR 17 1 1 TYR TYR A . n A 1 18 SER 18 2 2 SER SER A . n A 1 19 THR 19 3 3 THR THR A . n A 1 20 SER 20 4 4 SER SER A . n A 1 21 VAL 21 5 5 VAL VAL A . n A 1 22 ALA 22 6 6 ALA ALA A . n A 1 23 LYS 23 7 7 LYS LYS A . n A 1 24 LEU 24 8 8 LEU LEU A . n A 1 25 ILE 25 9 9 ILE ILE A . n A 1 26 GLU 26 10 10 GLU GLU A . n A 1 27 GLU 27 11 11 GLU GLU A . n A 1 28 LEU 28 12 12 LEU LEU A . n A 1 29 SER 29 13 13 SER SER A . n A 1 30 LYS 30 14 14 LYS LYS A . n A 1 31 LEU 31 15 15 LEU LEU A . n A 1 32 PRO 32 16 16 PRO PRO A . n A 1 33 GLY 33 17 17 GLY GLY A . n A 1 34 ILE 34 18 18 ILE ILE A . n A 1 35 GLY 35 19 19 GLY GLY A . n A 1 36 PRO 36 20 20 PRO PRO A . n A 1 37 GLY 37 21 21 GLY GLY A . n A 1 38 THR 38 22 22 THR THR A . n A 1 39 ALA 39 23 23 ALA ALA A . n A 1 40 GLN 40 24 24 GLN GLN A . n A 1 41 ARG 41 25 25 ARG ARG A . n A 1 42 LEU 42 26 26 LEU LEU A . n A 1 43 ALA 43 27 27 ALA ALA A . n A 1 44 PHE 44 28 28 PHE PHE A . n A 1 45 PHE 45 29 29 PHE PHE A . n A 1 46 ILE 46 30 30 ILE ILE A . n A 1 47 ILE 47 31 31 ILE ILE A . n A 1 48 ASN 48 32 32 ASN ASN A . n A 1 49 MET 49 33 33 MET MET A . n A 1 50 PRO 50 34 34 PRO PRO A . n A 1 51 LEU 51 35 35 LEU LEU A . n A 1 52 ASP 52 36 36 ASP ASP A . n A 1 53 GLU 53 37 37 GLU GLU A . n A 1 54 VAL 54 38 38 VAL VAL A . n A 1 55 ARG 55 39 39 ARG ARG A . n A 1 56 SER 56 40 40 SER SER A . n A 1 57 LEU 57 41 41 LEU LEU A . n A 1 58 SER 58 42 42 SER SER A . n A 1 59 GLN 59 43 43 GLN GLN A . n A 1 60 ALA 60 44 44 ALA ALA A . n A 1 61 ILE 61 45 45 ILE ILE A . n A 1 62 ILE 62 46 46 ILE ILE A . n A 1 63 GLU 63 47 47 GLU GLU A . n A 1 64 ALA 64 48 48 ALA ALA A . n A 1 65 LYS 65 49 49 LYS LYS A . n A 1 66 GLU 66 50 50 GLU GLU A . n A 1 67 LYS 67 51 51 LYS LYS A . n A 1 68 LEU 68 52 52 LEU LEU A . n A 1 69 ARG 69 53 53 ARG ARG A . n A 1 70 TYR 70 54 54 TYR TYR A . n A 1 71 CYS 71 55 55 CYS CYS A . n A 1 72 LYS 72 56 56 LYS LYS A . n A 1 73 ILE 73 57 57 ILE ILE A . n A 1 74 CYS 74 58 58 CYS CYS A . n A 1 75 PHE 75 59 59 PHE PHE A . n A 1 76 ASN 76 60 60 ASN ASN A . n A 1 77 ILE 77 61 61 ILE ILE A . n A 1 78 THR 78 62 62 THR THR A . n A 1 79 ASP 79 63 63 ASP ASP A . n A 1 80 LYS 80 64 64 LYS LYS A . n A 1 81 GLU 81 65 65 GLU GLU A . n A 1 82 VAL 82 66 66 VAL VAL A . n A 1 83 CYS 83 67 67 CYS CYS A . n A 1 84 ASP 84 68 68 ASP ASP A . n A 1 85 ILE 85 69 69 ILE ILE A . n A 1 86 CYS 86 70 70 CYS CYS A . n A 1 87 SER 87 71 71 SER SER A . n A 1 88 ASP 88 72 72 ASP ASP A . n A 1 89 GLU 89 73 73 GLU GLU A . n A 1 90 ASN 90 74 74 ASN ASN A . n A 1 91 ARG 91 75 75 ARG ARG A . n A 1 92 ASP 92 76 76 ASP ASP A . n A 1 93 HIS 93 77 77 HIS HIS A . n A 1 94 SER 94 78 78 SER SER A . n A 1 95 THR 95 79 79 THR THR A . n A 1 96 ILE 96 80 80 ILE ILE A . n A 1 97 CYS 97 81 81 CYS CYS A . n A 1 98 VAL 98 82 82 VAL VAL A . n A 1 99 VAL 99 83 83 VAL VAL A . n A 1 100 SER 100 84 84 SER SER A . n A 1 101 HIS 101 85 85 HIS HIS A . n A 1 102 PRO 102 86 86 PRO PRO A . n A 1 103 MET 103 87 87 MET MET A . n A 1 104 ASP 104 88 88 ASP ASP A . n A 1 105 VAL 105 89 89 VAL VAL A . n A 1 106 VAL 106 90 90 VAL VAL A . n A 1 107 ALA 107 91 91 ALA ALA A . n A 1 108 MET 108 92 92 MET MET A . n A 1 109 GLU 109 93 93 GLU GLU A . n A 1 110 LYS 110 94 94 LYS ALA A . n A 1 111 VAL 111 95 95 VAL VAL A . n A 1 112 LYS 112 96 96 LYS LYS A . n A 1 113 GLU 113 97 97 GLU GLU A . n A 1 114 TYR 114 98 98 TYR TYR A . n A 1 115 LYS 115 99 99 LYS LYS A . n A 1 116 GLY 116 100 100 GLY GLY A . n A 1 117 VAL 117 101 101 VAL VAL A . n A 1 118 TYR 118 102 102 TYR TYR A . n A 1 119 HIS 119 103 103 HIS HIS A . n A 1 120 VAL 120 104 104 VAL VAL A . n A 1 121 LEU 121 105 105 LEU LEU A . n A 1 122 HIS 122 106 106 HIS HIS A . n A 1 123 GLY 123 107 107 GLY GLY A . n A 1 124 VAL 124 108 108 VAL VAL A . n A 1 125 ILE 125 109 109 ILE ILE A . n A 1 126 SER 126 110 110 SER SER A . n A 1 127 PRO 127 111 111 PRO PRO A . n A 1 128 ILE 128 112 112 ILE ILE A . n A 1 129 GLU 129 113 113 GLU GLU A . n A 1 130 GLY 130 114 114 GLY GLY A . n A 1 131 VAL 131 115 115 VAL VAL A . n A 1 132 GLY 132 116 116 GLY GLY A . n A 1 133 PRO 133 117 117 PRO GLY A . n A 1 134 GLU 134 118 118 GLU GLU A . n A 1 135 ASP 135 119 119 ASP ASP A . n A 1 136 ILE 136 120 120 ILE ILE A . n A 1 137 ARG 137 121 121 ARG ARG A . n A 1 138 ILE 138 122 122 ILE ILE A . n A 1 139 LYS 139 123 123 LYS LYS A . n A 1 140 GLU 140 124 124 GLU GLU A . n A 1 141 LEU 141 125 125 LEU LEU A . n A 1 142 LEU 142 126 126 LEU LEU A . n A 1 143 GLU 143 127 127 GLU GLU A . n A 1 144 ARG 144 128 128 ARG ARG A . n A 1 145 VAL 145 129 129 VAL VAL A . n A 1 146 ARG 146 130 130 ARG ARG A . n A 1 147 ASP 147 131 131 ASP ASP A . n A 1 148 GLY 148 132 132 GLY GLY A . n A 1 149 SER 149 133 133 SER SER A . n A 1 150 VAL 150 134 134 VAL VAL A . n A 1 151 LYS 151 135 135 LYS LYS A . n A 1 152 GLU 152 136 136 GLU GLU A . n A 1 153 VAL 153 137 137 VAL VAL A . n A 1 154 ILE 154 138 138 ILE ILE A . n A 1 155 LEU 155 139 139 LEU LEU A . n A 1 156 ALA 156 140 140 ALA ALA A . n A 1 157 THR 157 141 141 THR THR A . n A 1 158 ASN 158 142 142 ASN ASN A . n A 1 159 PRO 159 143 143 PRO PRO A . n A 1 160 ASP 160 144 144 ASP ASP A . n A 1 161 ILE 161 145 145 ILE ILE A . n A 1 162 GLU 162 146 146 GLU GLU A . n A 1 163 GLY 163 147 147 GLY GLY A . n A 1 164 GLU 164 148 148 GLU GLU A . n A 1 165 ALA 165 149 149 ALA ALA A . n A 1 166 THR 166 150 150 THR THR A . n A 1 167 ALA 167 151 151 ALA ALA A . n A 1 168 MET 168 152 152 MET MET A . n A 1 169 TYR 169 153 153 TYR TYR A . n A 1 170 ILE 170 154 154 ILE ILE A . n A 1 171 ALA 171 155 155 ALA ALA A . n A 1 172 LYS 172 156 156 LYS LYS A . n A 1 173 LEU 173 157 157 LEU LEU A . n A 1 174 LEU 174 158 158 LEU LEU A . n A 1 175 LYS 175 159 159 LYS LYS A . n A 1 176 PRO 176 160 160 PRO PRO A . n A 1 177 PHE 177 161 161 PHE PHE A . n A 1 178 GLY 178 162 162 GLY GLY A . n A 1 179 VAL 179 163 163 VAL VAL A . n A 1 180 LYS 180 164 164 LYS LYS A . n A 1 181 VAL 181 165 165 VAL VAL A . n A 1 182 THR 182 166 166 THR THR A . n A 1 183 ARG 183 167 167 ARG ARG A . n A 1 184 ILE 184 168 168 ILE ILE A . n A 1 185 ALA 185 169 169 ALA ALA A . n A 1 186 HIS 186 170 170 HIS HIS A . n A 1 187 GLY 187 171 171 GLY GLY A . n A 1 188 ILE 188 172 172 ILE ILE A . n A 1 189 PRO 189 173 173 PRO PRO A . n A 1 190 VAL 190 174 174 VAL VAL A . n A 1 191 GLY 191 175 175 GLY GLY A . n A 1 192 GLY 192 176 176 GLY GLY A . n A 1 193 ASP 193 177 177 ASP ASP A . n A 1 194 LEU 194 178 178 LEU LEU A . n A 1 195 GLU 195 179 179 GLU GLU A . n A 1 196 TYR 196 180 180 TYR TYR A . n A 1 197 THR 197 181 181 THR THR A . n A 1 198 ASP 198 182 182 ASP ASP A . n A 1 199 VAL 199 183 183 VAL VAL A . n A 1 200 VAL 200 184 184 VAL VAL A . n A 1 201 THR 201 185 185 THR THR A . n A 1 202 LEU 202 186 186 LEU LEU A . n A 1 203 SER 203 187 187 SER SER A . n A 1 204 LYS 204 188 188 LYS LYS A . n A 1 205 ALA 205 189 189 ALA ALA A . n A 1 206 LEU 206 190 190 LEU LEU A . n A 1 207 GLU 207 191 191 GLU GLU A . n A 1 208 GLY 208 192 192 GLY GLY A . n A 1 209 ARG 209 193 193 ARG ARG A . n A 1 210 ARG 210 194 194 ARG ARG A . n A 1 211 GLU 211 195 195 GLU GLU A . n A 1 212 VAL 212 196 196 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 201 1 ZN ZN A . C 3 HOH 1 301 1 HOH HOH A . C 3 HOH 2 302 2 HOH HOH A . C 3 HOH 3 303 3 HOH HOH A . C 3 HOH 4 304 4 HOH HOH A . C 3 HOH 5 305 5 HOH HOH A . C 3 HOH 6 306 6 HOH HOH A . C 3 HOH 7 307 7 HOH HOH A . C 3 HOH 8 308 8 HOH HOH A . C 3 HOH 9 309 9 HOH HOH A . C 3 HOH 10 310 10 HOH HOH A . C 3 HOH 11 311 11 HOH HOH A . C 3 HOH 12 312 12 HOH HOH A . C 3 HOH 13 313 13 HOH HOH A . C 3 HOH 14 314 14 HOH HOH A . C 3 HOH 15 315 15 HOH HOH A . C 3 HOH 16 316 16 HOH HOH A . C 3 HOH 17 317 17 HOH HOH A . C 3 HOH 18 318 18 HOH HOH A . C 3 HOH 19 319 19 HOH HOH A . C 3 HOH 20 320 20 HOH HOH A . C 3 HOH 21 321 21 HOH HOH A . C 3 HOH 22 322 22 HOH HOH A . C 3 HOH 23 323 23 HOH HOH A . C 3 HOH 24 324 24 HOH HOH A . C 3 HOH 25 325 1 HOH HOH A . C 3 HOH 26 326 8 HOH HOH A . C 3 HOH 27 327 11 HOH HOH A . C 3 HOH 28 328 20 HOH HOH A . C 3 HOH 29 329 21 HOH HOH A . C 3 HOH 30 330 24 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4190 ? 1 MORE -27 ? 1 'SSA (A^2)' 22970 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 11_554 -x+1/2,y,-z-1/2 -1.0000000000 0.0000000000 0.0000000000 33.4240000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -67.6015000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 71 ? A CYS 55 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 74 ? A CYS 58 ? 1_555 96.5 ? 2 SG ? A CYS 71 ? A CYS 55 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 83 ? A CYS 67 ? 1_555 130.7 ? 3 SG ? A CYS 74 ? A CYS 58 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 83 ? A CYS 67 ? 1_555 117.3 ? 4 SG ? A CYS 71 ? A CYS 55 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 86 ? A CYS 70 ? 1_555 103.2 ? 5 SG ? A CYS 74 ? A CYS 58 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 86 ? A CYS 70 ? 1_555 116.5 ? 6 SG ? A CYS 83 ? A CYS 67 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 86 ? A CYS 70 ? 1_555 93.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-12-19 2 'Structure model' 1 1 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' pdbx_struct_conn_angle 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_ref_seq_dif 8 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.value' 8 2 'Structure model' '_struct_conn.pdbx_dist_value' 9 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 11 2 'Structure model' '_struct_ref_seq_dif.details' 12 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 13 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 14 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASES phasing . ? 2 PHENIX refinement '(phenix.refine: 1.6.4_486)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 312 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 312 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_555 _pdbx_validate_symm_contact.dist 2.19 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 SER _pdbx_validate_rmsd_angle.auth_seq_id_1 110 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 111 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 111 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 136.99 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 17.69 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 55 ? ? -39.31 128.05 2 1 ILE A 69 ? ? -58.14 -71.32 3 1 CYS A 70 ? ? -30.35 -85.38 4 1 SER A 71 ? ? -63.12 77.70 5 1 ASP A 72 ? ? -121.96 -55.02 6 1 GLU A 73 ? ? 97.47 -42.86 7 1 ASN A 74 ? ? -76.71 21.95 8 1 HIS A 106 ? ? -95.56 -80.73 9 1 SER A 110 ? ? -119.63 71.89 10 1 ILE A 112 ? ? -140.06 29.04 11 1 GLU A 113 ? ? -50.35 -176.15 12 1 VAL A 115 ? ? -69.37 84.70 13 1 PRO A 117 ? ? 120.45 50.84 14 1 LYS A 135 ? ? -78.47 -70.08 15 1 ALA A 140 ? ? -107.49 76.36 16 1 ASP A 144 ? ? -48.82 164.82 17 1 ALA A 149 ? ? 77.48 -29.24 18 1 THR A 181 ? ? -46.76 164.22 19 1 THR A 185 ? ? -25.72 -74.48 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 10 ? CD ? A GLU 26 CD 2 1 Y 1 A GLU 10 ? OE1 ? A GLU 26 OE1 3 1 Y 1 A GLU 10 ? OE2 ? A GLU 26 OE2 4 1 Y 1 A LYS 14 ? CG ? A LYS 30 CG 5 1 Y 1 A LYS 14 ? CD ? A LYS 30 CD 6 1 Y 1 A LYS 14 ? CE ? A LYS 30 CE 7 1 Y 1 A LYS 14 ? NZ ? A LYS 30 NZ 8 1 Y 1 A ARG 25 ? CG ? A ARG 41 CG 9 1 Y 1 A ARG 25 ? CD ? A ARG 41 CD 10 1 Y 1 A ARG 25 ? NE ? A ARG 41 NE 11 1 Y 1 A ARG 25 ? CZ ? A ARG 41 CZ 12 1 Y 1 A ARG 25 ? NH1 ? A ARG 41 NH1 13 1 Y 1 A ARG 25 ? NH2 ? A ARG 41 NH2 14 1 Y 1 A ASP 36 ? CG ? A ASP 52 CG 15 1 Y 1 A ASP 36 ? OD1 ? A ASP 52 OD1 16 1 Y 1 A ASP 36 ? OD2 ? A ASP 52 OD2 17 1 Y 1 A LYS 94 ? CG ? A LYS 110 CG 18 1 Y 1 A LYS 94 ? CD ? A LYS 110 CD 19 1 Y 1 A LYS 94 ? CE ? A LYS 110 CE 20 1 Y 1 A LYS 94 ? NZ ? A LYS 110 NZ 21 1 Y 1 A ILE 109 ? CG1 ? A ILE 125 CG1 22 1 Y 1 A ILE 109 ? CG2 ? A ILE 125 CG2 23 1 Y 1 A ILE 109 ? CD1 ? A ILE 125 CD1 24 1 Y 1 A PRO 111 ? CG ? A PRO 127 CG 25 1 Y 1 A PRO 111 ? CD ? A PRO 127 CD 26 1 Y 1 A ILE 112 ? CG1 ? A ILE 128 CG1 27 1 Y 1 A ILE 112 ? CG2 ? A ILE 128 CG2 28 1 Y 1 A ILE 112 ? CD1 ? A ILE 128 CD1 29 1 Y 1 A VAL 115 ? CG1 ? A VAL 131 CG1 30 1 Y 1 A VAL 115 ? CG2 ? A VAL 131 CG2 31 1 Y 1 A PRO 117 ? CB ? A PRO 133 CB 32 1 Y 1 A PRO 117 ? CG ? A PRO 133 CG 33 1 Y 1 A PRO 117 ? CD ? A PRO 133 CD 34 1 Y 1 A ASP 119 ? CG ? A ASP 135 CG 35 1 Y 1 A ASP 119 ? OD1 ? A ASP 135 OD1 36 1 Y 1 A ASP 119 ? OD2 ? A ASP 135 OD2 37 1 Y 1 A LYS 159 ? CG ? A LYS 175 CG 38 1 Y 1 A LYS 159 ? CD ? A LYS 175 CD 39 1 Y 1 A LYS 159 ? CE ? A LYS 175 CE 40 1 Y 1 A LYS 159 ? NZ ? A LYS 175 NZ 41 1 Y 1 A VAL 174 ? CG1 ? A VAL 190 CG1 42 1 Y 1 A VAL 174 ? CG2 ? A VAL 190 CG2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -15 ? A GLY 1 2 1 Y 1 A SER -14 ? A SER 2 3 1 Y 1 A SER -13 ? A SER 3 4 1 Y 1 A HIS -12 ? A HIS 4 5 1 Y 1 A HIS -11 ? A HIS 5 6 1 Y 1 A HIS -10 ? A HIS 6 7 1 Y 1 A HIS -9 ? A HIS 7 8 1 Y 1 A HIS -8 ? A HIS 8 9 1 Y 1 A HIS -7 ? A HIS 9 10 1 Y 1 A SER -6 ? A SER 10 11 1 Y 1 A GLN -5 ? A GLN 11 12 1 Y 1 A ASP -4 ? A ASP 12 13 1 Y 1 A PRO -3 ? A PRO 13 14 1 Y 1 A MET -2 ? A MET 14 15 1 Y 1 A SER -1 ? A SER 15 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TYR N N N N 321 TYR CA C N S 322 TYR C C N N 323 TYR O O N N 324 TYR CB C N N 325 TYR CG C Y N 326 TYR CD1 C Y N 327 TYR CD2 C Y N 328 TYR CE1 C Y N 329 TYR CE2 C Y N 330 TYR CZ C Y N 331 TYR OH O N N 332 TYR OXT O N N 333 TYR H H N N 334 TYR H2 H N N 335 TYR HA H N N 336 TYR HB2 H N N 337 TYR HB3 H N N 338 TYR HD1 H N N 339 TYR HD2 H N N 340 TYR HE1 H N N 341 TYR HE2 H N N 342 TYR HH H N N 343 TYR HXT H N N 344 VAL N N N N 345 VAL CA C N S 346 VAL C C N N 347 VAL O O N N 348 VAL CB C N N 349 VAL CG1 C N N 350 VAL CG2 C N N 351 VAL OXT O N N 352 VAL H H N N 353 VAL H2 H N N 354 VAL HA H N N 355 VAL HB H N N 356 VAL HG11 H N N 357 VAL HG12 H N N 358 VAL HG13 H N N 359 VAL HG21 H N N 360 VAL HG22 H N N 361 VAL HG23 H N N 362 VAL HXT H N N 363 ZN ZN ZN N N 364 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TYR N CA sing N N 306 TYR N H sing N N 307 TYR N H2 sing N N 308 TYR CA C sing N N 309 TYR CA CB sing N N 310 TYR CA HA sing N N 311 TYR C O doub N N 312 TYR C OXT sing N N 313 TYR CB CG sing N N 314 TYR CB HB2 sing N N 315 TYR CB HB3 sing N N 316 TYR CG CD1 doub Y N 317 TYR CG CD2 sing Y N 318 TYR CD1 CE1 sing Y N 319 TYR CD1 HD1 sing N N 320 TYR CD2 CE2 doub Y N 321 TYR CD2 HD2 sing N N 322 TYR CE1 CZ doub Y N 323 TYR CE1 HE1 sing N N 324 TYR CE2 CZ sing Y N 325 TYR CE2 HE2 sing N N 326 TYR CZ OH sing N N 327 TYR OH HH sing N N 328 TYR OXT HXT sing N N 329 VAL N CA sing N N 330 VAL N H sing N N 331 VAL N H2 sing N N 332 VAL CA C sing N N 333 VAL CA CB sing N N 334 VAL CA HA sing N N 335 VAL C O doub N N 336 VAL C OXT sing N N 337 VAL CB CG1 sing N N 338 VAL CB CG2 sing N N 339 VAL CB HB sing N N 340 VAL CG1 HG11 sing N N 341 VAL CG1 HG12 sing N N 342 VAL CG1 HG13 sing N N 343 VAL CG2 HG21 sing N N 344 VAL CG2 HG22 sing N N 345 VAL CG2 HG23 sing N N 346 VAL OXT HXT sing N N 347 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3VDP _pdbx_initial_refinement_model.details ? #