data_3VEM # _entry.id 3VEM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3VEM pdb_00003vem 10.2210/pdb3vem/pdb RCSB RCSB069948 ? ? WWPDB D_1000069948 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-03-07 2 'Structure model' 1 1 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3VEM _pdbx_database_status.recvd_initial_deposition_date 2012-01-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nishikura, T.' 1 'Petty, T.J.' 2 'Halazonetis, T.' 3 'Paszkowski, J.' 4 'Thore, S.' 5 # _citation.id primary _citation.title 'Structural Basis of Transcriptional Gene Silencing Mediated by Arabidopsis MOM1.' _citation.journal_abbrev 'PLOS GENET.' _citation.journal_volume 8 _citation.page_first e1002484 _citation.page_last e1002484 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1553-7390 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22346760 _citation.pdbx_database_id_DOI 10.1371/journal.pgen.1002484 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nishimura, T.' 1 ? primary 'Molinard, G.' 2 ? primary 'Petty, T.J.' 3 ? primary 'Broger, L.' 4 ? primary 'Gabus, C.' 5 ? primary 'Halazonetis, T.D.' 6 ? primary 'Thore, S.' 7 ? primary 'Paszkowski, J.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Helicase protein MOM1' _entity.formula_weight 13260.241 _entity.pdbx_number_of_molecules 4 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Conserved MOM1 Motif 2 (CMM2)' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protein MAINTENANCE OF METHYLATION, Protein MORPHEUS MOLECULE 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;HSAGVTALVPSLLNNGTEQIAVQPVPQIPFPVFNDPFLHELEKLRRESENSKKTFEEKKSILKAELERKMAEVQAEFRRK FHEVEAEHNTRTTKIEKDKNLVIMNKLLANAFLSK ; _entity_poly.pdbx_seq_one_letter_code_can ;HSAGVTALVPSLLNNGTEQIAVQPVPQIPFPVFNDPFLHELEKLRRESENSKKTFEEKKSILKAELERKMAEVQAEFRRK FHEVEAEHNTRTTKIEKDKNLVIMNKLLANAFLSK ; _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 SER n 1 3 ALA n 1 4 GLY n 1 5 VAL n 1 6 THR n 1 7 ALA n 1 8 LEU n 1 9 VAL n 1 10 PRO n 1 11 SER n 1 12 LEU n 1 13 LEU n 1 14 ASN n 1 15 ASN n 1 16 GLY n 1 17 THR n 1 18 GLU n 1 19 GLN n 1 20 ILE n 1 21 ALA n 1 22 VAL n 1 23 GLN n 1 24 PRO n 1 25 VAL n 1 26 PRO n 1 27 GLN n 1 28 ILE n 1 29 PRO n 1 30 PHE n 1 31 PRO n 1 32 VAL n 1 33 PHE n 1 34 ASN n 1 35 ASP n 1 36 PRO n 1 37 PHE n 1 38 LEU n 1 39 HIS n 1 40 GLU n 1 41 LEU n 1 42 GLU n 1 43 LYS n 1 44 LEU n 1 45 ARG n 1 46 ARG n 1 47 GLU n 1 48 SER n 1 49 GLU n 1 50 ASN n 1 51 SER n 1 52 LYS n 1 53 LYS n 1 54 THR n 1 55 PHE n 1 56 GLU n 1 57 GLU n 1 58 LYS n 1 59 LYS n 1 60 SER n 1 61 ILE n 1 62 LEU n 1 63 LYS n 1 64 ALA n 1 65 GLU n 1 66 LEU n 1 67 GLU n 1 68 ARG n 1 69 LYS n 1 70 MET n 1 71 ALA n 1 72 GLU n 1 73 VAL n 1 74 GLN n 1 75 ALA n 1 76 GLU n 1 77 PHE n 1 78 ARG n 1 79 ARG n 1 80 LYS n 1 81 PHE n 1 82 HIS n 1 83 GLU n 1 84 VAL n 1 85 GLU n 1 86 ALA n 1 87 GLU n 1 88 HIS n 1 89 ASN n 1 90 THR n 1 91 ARG n 1 92 THR n 1 93 THR n 1 94 LYS n 1 95 ILE n 1 96 GLU n 1 97 LYS n 1 98 ASP n 1 99 LYS n 1 100 ASN n 1 101 LEU n 1 102 VAL n 1 103 ILE n 1 104 MET n 1 105 ASN n 1 106 LYS n 1 107 LEU n 1 108 LEU n 1 109 ALA n 1 110 ASN n 1 111 ALA n 1 112 PHE n 1 113 LEU n 1 114 SER n 1 115 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'mouse-ear cress,thale-cress' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MOM1, MOM, At1g08060, T6D22.14' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 1700 ? ? ? A . n A 1 2 SER 2 1701 ? ? ? A . n A 1 3 ALA 3 1702 ? ? ? A . n A 1 4 GLY 4 1703 ? ? ? A . n A 1 5 VAL 5 1704 ? ? ? A . n A 1 6 THR 6 1705 ? ? ? A . n A 1 7 ALA 7 1706 ? ? ? A . n A 1 8 LEU 8 1707 ? ? ? A . n A 1 9 VAL 9 1708 ? ? ? A . n A 1 10 PRO 10 1709 ? ? ? A . n A 1 11 SER 11 1710 ? ? ? A . n A 1 12 LEU 12 1711 ? ? ? A . n A 1 13 LEU 13 1712 ? ? ? A . n A 1 14 ASN 14 1713 ? ? ? A . n A 1 15 ASN 15 1714 ? ? ? A . n A 1 16 GLY 16 1715 ? ? ? A . n A 1 17 THR 17 1716 ? ? ? A . n A 1 18 GLU 18 1717 ? ? ? A . n A 1 19 GLN 19 1718 ? ? ? A . n A 1 20 ILE 20 1719 ? ? ? A . n A 1 21 ALA 21 1720 ? ? ? A . n A 1 22 VAL 22 1721 ? ? ? A . n A 1 23 GLN 23 1722 ? ? ? A . n A 1 24 PRO 24 1723 ? ? ? A . n A 1 25 VAL 25 1724 ? ? ? A . n A 1 26 PRO 26 1725 ? ? ? A . n A 1 27 GLN 27 1726 ? ? ? A . n A 1 28 ILE 28 1727 ? ? ? A . n A 1 29 PRO 29 1728 ? ? ? A . n A 1 30 PHE 30 1729 ? ? ? A . n A 1 31 PRO 31 1730 ? ? ? A . n A 1 32 VAL 32 1731 ? ? ? A . n A 1 33 PHE 33 1732 32 PHE PHE A . n A 1 34 ASN 34 1733 33 ASN ASN A . n A 1 35 ASP 35 1734 34 ASP ASP A . n A 1 36 PRO 36 1735 35 PRO PRO A . n A 1 37 PHE 37 1736 36 PHE PHE A . n A 1 38 LEU 38 1737 37 LEU LEU A . n A 1 39 HIS 39 1738 38 HIS HIS A . n A 1 40 GLU 40 1739 39 GLU GLU A . n A 1 41 LEU 41 1740 40 LEU LEU A . n A 1 42 GLU 42 1741 41 GLU GLU A . n A 1 43 LYS 43 1742 42 LYS LYS A . n A 1 44 LEU 44 1743 43 LEU LEU A . n A 1 45 ARG 45 1744 44 ARG ARG A . n A 1 46 ARG 46 1745 45 ARG ARG A . n A 1 47 GLU 47 1746 46 GLU GLU A . n A 1 48 SER 48 1747 47 SER SER A . n A 1 49 GLU 49 1748 48 GLU GLU A . n A 1 50 ASN 50 1749 49 ASN ASN A . n A 1 51 SER 51 1750 50 SER SER A . n A 1 52 LYS 52 1751 51 LYS LYS A . n A 1 53 LYS 53 1752 52 LYS LYS A . n A 1 54 THR 54 1753 53 THR THR A . n A 1 55 PHE 55 1754 54 PHE PHE A . n A 1 56 GLU 56 1755 55 GLU GLU A . n A 1 57 GLU 57 1756 56 GLU GLU A . n A 1 58 LYS 58 1757 57 LYS LYS A . n A 1 59 LYS 59 1758 58 LYS LYS A . n A 1 60 SER 60 1759 59 SER SER A . n A 1 61 ILE 61 1760 60 ILE ILE A . n A 1 62 LEU 62 1761 61 LEU LEU A . n A 1 63 LYS 63 1762 62 LYS LYS A . n A 1 64 ALA 64 1763 63 ALA ALA A . n A 1 65 GLU 65 1764 64 GLU GLU A . n A 1 66 LEU 66 1765 65 LEU LEU A . n A 1 67 GLU 67 1766 66 GLU GLU A . n A 1 68 ARG 68 1767 67 ARG ARG A . n A 1 69 LYS 69 1768 68 LYS LYS A . n A 1 70 MET 70 1769 69 MET MET A . n A 1 71 ALA 71 1770 70 ALA ALA A . n A 1 72 GLU 72 1771 71 GLU GLU A . n A 1 73 VAL 73 1772 72 VAL VAL A . n A 1 74 GLN 74 1773 73 GLN GLN A . n A 1 75 ALA 75 1774 74 ALA ALA A . n A 1 76 GLU 76 1775 75 GLU GLU A . n A 1 77 PHE 77 1776 76 PHE PHE A . n A 1 78 ARG 78 1777 77 ARG ARG A . n A 1 79 ARG 79 1778 78 ARG ARG A . n A 1 80 LYS 80 1779 79 LYS LYS A . n A 1 81 PHE 81 1780 80 PHE PHE A . n A 1 82 HIS 82 1781 81 HIS HIS A . n A 1 83 GLU 83 1782 82 GLU GLU A . n A 1 84 VAL 84 1783 83 VAL VAL A . n A 1 85 GLU 85 1784 84 GLU GLU A . n A 1 86 ALA 86 1785 85 ALA ALA A . n A 1 87 GLU 87 1786 86 GLU GLU A . n A 1 88 HIS 88 1787 87 HIS HIS A . n A 1 89 ASN 89 1788 88 ASN ASN A . n A 1 90 THR 90 1789 89 THR THR A . n A 1 91 ARG 91 1790 90 ARG ARG A . n A 1 92 THR 92 1791 91 THR THR A . n A 1 93 THR 93 1792 92 THR THR A . n A 1 94 LYS 94 1793 93 LYS LYS A . n A 1 95 ILE 95 1794 94 ILE ILE A . n A 1 96 GLU 96 1795 95 GLU GLU A . n A 1 97 LYS 97 1796 96 LYS LYS A . n A 1 98 ASP 98 1797 97 ASP ASP A . n A 1 99 LYS 99 1798 98 LYS LYS A . n A 1 100 ASN 100 1799 99 ASN ASN A . n A 1 101 LEU 101 1800 100 LEU LEU A . n A 1 102 VAL 102 1801 101 VAL VAL A . n A 1 103 ILE 103 1802 102 ILE ILE A . n A 1 104 MET 104 1803 103 MET MET A . n A 1 105 ASN 105 1804 104 ASN ASN A . n A 1 106 LYS 106 1805 105 LYS LYS A . n A 1 107 LEU 107 1806 106 LEU LEU A . n A 1 108 LEU 108 1807 107 LEU LEU A . n A 1 109 ALA 109 1808 108 ALA ALA A . n A 1 110 ASN 110 1809 109 ASN ASN A . n A 1 111 ALA 111 1810 110 ALA ALA A . n A 1 112 PHE 112 1811 111 PHE PHE A . n A 1 113 LEU 113 1812 112 LEU LEU A . n A 1 114 SER 114 1813 113 SER SER A . n A 1 115 LYS 115 1814 ? ? ? A . n B 1 1 HIS 1 1700 ? ? ? B . n B 1 2 SER 2 1701 ? ? ? B . n B 1 3 ALA 3 1702 ? ? ? B . n B 1 4 GLY 4 1703 ? ? ? B . n B 1 5 VAL 5 1704 ? ? ? B . n B 1 6 THR 6 1705 ? ? ? B . n B 1 7 ALA 7 1706 ? ? ? B . n B 1 8 LEU 8 1707 ? ? ? B . n B 1 9 VAL 9 1708 ? ? ? B . n B 1 10 PRO 10 1709 ? ? ? B . n B 1 11 SER 11 1710 ? ? ? B . n B 1 12 LEU 12 1711 ? ? ? B . n B 1 13 LEU 13 1712 ? ? ? B . n B 1 14 ASN 14 1713 ? ? ? B . n B 1 15 ASN 15 1714 ? ? ? B . n B 1 16 GLY 16 1715 ? ? ? B . n B 1 17 THR 17 1716 ? ? ? B . n B 1 18 GLU 18 1717 ? ? ? B . n B 1 19 GLN 19 1718 ? ? ? B . n B 1 20 ILE 20 1719 ? ? ? B . n B 1 21 ALA 21 1720 ? ? ? B . n B 1 22 VAL 22 1721 ? ? ? B . n B 1 23 GLN 23 1722 ? ? ? B . n B 1 24 PRO 24 1723 ? ? ? B . n B 1 25 VAL 25 1724 ? ? ? B . n B 1 26 PRO 26 1725 ? ? ? B . n B 1 27 GLN 27 1726 ? ? ? B . n B 1 28 ILE 28 1727 ? ? ? B . n B 1 29 PRO 29 1728 ? ? ? B . n B 1 30 PHE 30 1729 ? ? ? B . n B 1 31 PRO 31 1730 ? ? ? B . n B 1 32 VAL 32 1731 ? ? ? B . n B 1 33 PHE 33 1732 32 PHE PHE B . n B 1 34 ASN 34 1733 33 ASN ASN B . n B 1 35 ASP 35 1734 34 ASP ASP B . n B 1 36 PRO 36 1735 35 PRO PRO B . n B 1 37 PHE 37 1736 36 PHE PHE B . n B 1 38 LEU 38 1737 37 LEU LEU B . n B 1 39 HIS 39 1738 38 HIS HIS B . n B 1 40 GLU 40 1739 39 GLU GLU B . n B 1 41 LEU 41 1740 40 LEU LEU B . n B 1 42 GLU 42 1741 41 GLU GLU B . n B 1 43 LYS 43 1742 42 LYS LYS B . n B 1 44 LEU 44 1743 43 LEU LEU B . n B 1 45 ARG 45 1744 44 ARG ARG B . n B 1 46 ARG 46 1745 45 ARG ARG B . n B 1 47 GLU 47 1746 46 GLU GLU B . n B 1 48 SER 48 1747 47 SER SER B . n B 1 49 GLU 49 1748 48 GLU GLU B . n B 1 50 ASN 50 1749 49 ASN ASN B . n B 1 51 SER 51 1750 50 SER SER B . n B 1 52 LYS 52 1751 51 LYS LYS B . n B 1 53 LYS 53 1752 52 LYS LYS B . n B 1 54 THR 54 1753 53 THR THR B . n B 1 55 PHE 55 1754 54 PHE PHE B . n B 1 56 GLU 56 1755 55 GLU GLU B . n B 1 57 GLU 57 1756 56 GLU GLU B . n B 1 58 LYS 58 1757 57 LYS LYS B . n B 1 59 LYS 59 1758 58 LYS LYS B . n B 1 60 SER 60 1759 59 SER SER B . n B 1 61 ILE 61 1760 60 ILE ILE B . n B 1 62 LEU 62 1761 61 LEU LEU B . n B 1 63 LYS 63 1762 62 LYS LYS B . n B 1 64 ALA 64 1763 63 ALA ALA B . n B 1 65 GLU 65 1764 64 GLU GLU B . n B 1 66 LEU 66 1765 65 LEU LEU B . n B 1 67 GLU 67 1766 66 GLU GLU B . n B 1 68 ARG 68 1767 67 ARG ARG B . n B 1 69 LYS 69 1768 68 LYS LYS B . n B 1 70 MET 70 1769 69 MET MET B . n B 1 71 ALA 71 1770 70 ALA ALA B . n B 1 72 GLU 72 1771 71 GLU GLU B . n B 1 73 VAL 73 1772 72 VAL VAL B . n B 1 74 GLN 74 1773 73 GLN GLN B . n B 1 75 ALA 75 1774 74 ALA ALA B . n B 1 76 GLU 76 1775 75 GLU GLU B . n B 1 77 PHE 77 1776 76 PHE PHE B . n B 1 78 ARG 78 1777 77 ARG ARG B . n B 1 79 ARG 79 1778 78 ARG ARG B . n B 1 80 LYS 80 1779 79 LYS LYS B . n B 1 81 PHE 81 1780 80 PHE PHE B . n B 1 82 HIS 82 1781 81 HIS HIS B . n B 1 83 GLU 83 1782 82 GLU GLU B . n B 1 84 VAL 84 1783 83 VAL VAL B . n B 1 85 GLU 85 1784 84 GLU GLU B . n B 1 86 ALA 86 1785 85 ALA ALA B . n B 1 87 GLU 87 1786 86 GLU GLU B . n B 1 88 HIS 88 1787 87 HIS HIS B . n B 1 89 ASN 89 1788 88 ASN ASN B . n B 1 90 THR 90 1789 89 THR THR B . n B 1 91 ARG 91 1790 90 ARG ARG B . n B 1 92 THR 92 1791 91 THR THR B . n B 1 93 THR 93 1792 92 THR THR B . n B 1 94 LYS 94 1793 93 LYS LYS B . n B 1 95 ILE 95 1794 94 ILE ILE B . n B 1 96 GLU 96 1795 95 GLU GLU B . n B 1 97 LYS 97 1796 96 LYS LYS B . n B 1 98 ASP 98 1797 97 ASP ASP B . n B 1 99 LYS 99 1798 98 LYS LYS B . n B 1 100 ASN 100 1799 99 ASN ASN B . n B 1 101 LEU 101 1800 100 LEU LEU B . n B 1 102 VAL 102 1801 101 VAL VAL B . n B 1 103 ILE 103 1802 102 ILE ILE B . n B 1 104 MET 104 1803 103 MET MET B . n B 1 105 ASN 105 1804 104 ASN ASN B . n B 1 106 LYS 106 1805 105 LYS LYS B . n B 1 107 LEU 107 1806 106 LEU LEU B . n B 1 108 LEU 108 1807 107 LEU LEU B . n B 1 109 ALA 109 1808 108 ALA ALA B . n B 1 110 ASN 110 1809 109 ASN ASN B . n B 1 111 ALA 111 1810 110 ALA ALA B . n B 1 112 PHE 112 1811 111 PHE PHE B . n B 1 113 LEU 113 1812 112 LEU LEU B . n B 1 114 SER 114 1813 113 SER SER B . n B 1 115 LYS 115 1814 ? ? ? B . n C 1 1 HIS 1 1700 ? ? ? C . n C 1 2 SER 2 1701 ? ? ? C . n C 1 3 ALA 3 1702 ? ? ? C . n C 1 4 GLY 4 1703 ? ? ? C . n C 1 5 VAL 5 1704 ? ? ? C . n C 1 6 THR 6 1705 ? ? ? C . n C 1 7 ALA 7 1706 ? ? ? C . n C 1 8 LEU 8 1707 ? ? ? C . n C 1 9 VAL 9 1708 ? ? ? C . n C 1 10 PRO 10 1709 ? ? ? C . n C 1 11 SER 11 1710 ? ? ? C . n C 1 12 LEU 12 1711 ? ? ? C . n C 1 13 LEU 13 1712 ? ? ? C . n C 1 14 ASN 14 1713 ? ? ? C . n C 1 15 ASN 15 1714 ? ? ? C . n C 1 16 GLY 16 1715 ? ? ? C . n C 1 17 THR 17 1716 ? ? ? C . n C 1 18 GLU 18 1717 ? ? ? C . n C 1 19 GLN 19 1718 ? ? ? C . n C 1 20 ILE 20 1719 ? ? ? C . n C 1 21 ALA 21 1720 ? ? ? C . n C 1 22 VAL 22 1721 ? ? ? C . n C 1 23 GLN 23 1722 ? ? ? C . n C 1 24 PRO 24 1723 ? ? ? C . n C 1 25 VAL 25 1724 ? ? ? C . n C 1 26 PRO 26 1725 ? ? ? C . n C 1 27 GLN 27 1726 ? ? ? C . n C 1 28 ILE 28 1727 ? ? ? C . n C 1 29 PRO 29 1728 ? ? ? C . n C 1 30 PHE 30 1729 29 PHE PHE C . n C 1 31 PRO 31 1730 30 PRO PRO C . n C 1 32 VAL 32 1731 31 VAL VAL C . n C 1 33 PHE 33 1732 32 PHE PHE C . n C 1 34 ASN 34 1733 33 ASN ASN C . n C 1 35 ASP 35 1734 34 ASP ASP C . n C 1 36 PRO 36 1735 35 PRO PRO C . n C 1 37 PHE 37 1736 36 PHE PHE C . n C 1 38 LEU 38 1737 37 LEU LEU C . n C 1 39 HIS 39 1738 38 HIS HIS C . n C 1 40 GLU 40 1739 39 GLU GLU C . n C 1 41 LEU 41 1740 40 LEU LEU C . n C 1 42 GLU 42 1741 41 GLU GLU C . n C 1 43 LYS 43 1742 42 LYS LYS C . n C 1 44 LEU 44 1743 43 LEU LEU C . n C 1 45 ARG 45 1744 44 ARG ARG C . n C 1 46 ARG 46 1745 45 ARG ARG C . n C 1 47 GLU 47 1746 46 GLU GLU C . n C 1 48 SER 48 1747 47 SER SER C . n C 1 49 GLU 49 1748 48 GLU GLU C . n C 1 50 ASN 50 1749 49 ASN ASN C . n C 1 51 SER 51 1750 50 SER SER C . n C 1 52 LYS 52 1751 51 LYS LYS C . n C 1 53 LYS 53 1752 52 LYS LYS C . n C 1 54 THR 54 1753 53 THR THR C . n C 1 55 PHE 55 1754 54 PHE PHE C . n C 1 56 GLU 56 1755 55 GLU GLU C . n C 1 57 GLU 57 1756 56 GLU GLU C . n C 1 58 LYS 58 1757 57 LYS LYS C . n C 1 59 LYS 59 1758 58 LYS LYS C . n C 1 60 SER 60 1759 59 SER SER C . n C 1 61 ILE 61 1760 60 ILE ILE C . n C 1 62 LEU 62 1761 61 LEU LEU C . n C 1 63 LYS 63 1762 62 LYS LYS C . n C 1 64 ALA 64 1763 63 ALA ALA C . n C 1 65 GLU 65 1764 64 GLU GLU C . n C 1 66 LEU 66 1765 65 LEU LEU C . n C 1 67 GLU 67 1766 66 GLU GLU C . n C 1 68 ARG 68 1767 67 ARG ARG C . n C 1 69 LYS 69 1768 68 LYS LYS C . n C 1 70 MET 70 1769 69 MET MET C . n C 1 71 ALA 71 1770 70 ALA ALA C . n C 1 72 GLU 72 1771 71 GLU GLU C . n C 1 73 VAL 73 1772 72 VAL VAL C . n C 1 74 GLN 74 1773 73 GLN GLN C . n C 1 75 ALA 75 1774 74 ALA ALA C . n C 1 76 GLU 76 1775 75 GLU GLU C . n C 1 77 PHE 77 1776 76 PHE PHE C . n C 1 78 ARG 78 1777 77 ARG ARG C . n C 1 79 ARG 79 1778 78 ARG ARG C . n C 1 80 LYS 80 1779 79 LYS LYS C . n C 1 81 PHE 81 1780 80 PHE PHE C . n C 1 82 HIS 82 1781 81 HIS HIS C . n C 1 83 GLU 83 1782 82 GLU GLU C . n C 1 84 VAL 84 1783 83 VAL VAL C . n C 1 85 GLU 85 1784 84 GLU GLU C . n C 1 86 ALA 86 1785 85 ALA ALA C . n C 1 87 GLU 87 1786 86 GLU GLU C . n C 1 88 HIS 88 1787 87 HIS HIS C . n C 1 89 ASN 89 1788 88 ASN ASN C . n C 1 90 THR 90 1789 89 THR THR C . n C 1 91 ARG 91 1790 90 ARG ARG C . n C 1 92 THR 92 1791 91 THR THR C . n C 1 93 THR 93 1792 92 THR THR C . n C 1 94 LYS 94 1793 93 LYS LYS C . n C 1 95 ILE 95 1794 94 ILE ILE C . n C 1 96 GLU 96 1795 95 GLU GLU C . n C 1 97 LYS 97 1796 96 LYS LYS C . n C 1 98 ASP 98 1797 97 ASP ASP C . n C 1 99 LYS 99 1798 98 LYS LYS C . n C 1 100 ASN 100 1799 99 ASN ASN C . n C 1 101 LEU 101 1800 100 LEU LEU C . n C 1 102 VAL 102 1801 101 VAL VAL C . n C 1 103 ILE 103 1802 102 ILE ILE C . n C 1 104 MET 104 1803 103 MET MET C . n C 1 105 ASN 105 1804 104 ASN ASN C . n C 1 106 LYS 106 1805 105 LYS LYS C . n C 1 107 LEU 107 1806 106 LEU LEU C . n C 1 108 LEU 108 1807 107 LEU LEU C . n C 1 109 ALA 109 1808 108 ALA ALA C . n C 1 110 ASN 110 1809 109 ASN ASN C . n C 1 111 ALA 111 1810 110 ALA ALA C . n C 1 112 PHE 112 1811 111 PHE PHE C . n C 1 113 LEU 113 1812 ? ? ? C . n C 1 114 SER 114 1813 ? ? ? C . n C 1 115 LYS 115 1814 ? ? ? C . n D 1 1 HIS 1 1700 ? ? ? D . n D 1 2 SER 2 1701 ? ? ? D . n D 1 3 ALA 3 1702 ? ? ? D . n D 1 4 GLY 4 1703 ? ? ? D . n D 1 5 VAL 5 1704 ? ? ? D . n D 1 6 THR 6 1705 ? ? ? D . n D 1 7 ALA 7 1706 ? ? ? D . n D 1 8 LEU 8 1707 ? ? ? D . n D 1 9 VAL 9 1708 ? ? ? D . n D 1 10 PRO 10 1709 ? ? ? D . n D 1 11 SER 11 1710 ? ? ? D . n D 1 12 LEU 12 1711 ? ? ? D . n D 1 13 LEU 13 1712 ? ? ? D . n D 1 14 ASN 14 1713 ? ? ? D . n D 1 15 ASN 15 1714 ? ? ? D . n D 1 16 GLY 16 1715 ? ? ? D . n D 1 17 THR 17 1716 ? ? ? D . n D 1 18 GLU 18 1717 ? ? ? D . n D 1 19 GLN 19 1718 ? ? ? D . n D 1 20 ILE 20 1719 ? ? ? D . n D 1 21 ALA 21 1720 ? ? ? D . n D 1 22 VAL 22 1721 ? ? ? D . n D 1 23 GLN 23 1722 ? ? ? D . n D 1 24 PRO 24 1723 ? ? ? D . n D 1 25 VAL 25 1724 ? ? ? D . n D 1 26 PRO 26 1725 ? ? ? D . n D 1 27 GLN 27 1726 ? ? ? D . n D 1 28 ILE 28 1727 ? ? ? D . n D 1 29 PRO 29 1728 ? ? ? D . n D 1 30 PHE 30 1729 ? ? ? D . n D 1 31 PRO 31 1730 ? ? ? D . n D 1 32 VAL 32 1731 ? ? ? D . n D 1 33 PHE 33 1732 32 PHE PHE D . n D 1 34 ASN 34 1733 33 ASN ASN D . n D 1 35 ASP 35 1734 34 ASP ASP D . n D 1 36 PRO 36 1735 35 PRO PRO D . n D 1 37 PHE 37 1736 36 PHE PHE D . n D 1 38 LEU 38 1737 37 LEU LEU D . n D 1 39 HIS 39 1738 38 HIS HIS D . n D 1 40 GLU 40 1739 39 GLU GLU D . n D 1 41 LEU 41 1740 40 LEU LEU D . n D 1 42 GLU 42 1741 41 GLU GLU D . n D 1 43 LYS 43 1742 42 LYS LYS D . n D 1 44 LEU 44 1743 43 LEU LEU D . n D 1 45 ARG 45 1744 44 ARG ARG D . n D 1 46 ARG 46 1745 45 ARG ARG D . n D 1 47 GLU 47 1746 46 GLU GLU D . n D 1 48 SER 48 1747 47 SER SER D . n D 1 49 GLU 49 1748 48 GLU GLU D . n D 1 50 ASN 50 1749 49 ASN ASN D . n D 1 51 SER 51 1750 50 SER SER D . n D 1 52 LYS 52 1751 51 LYS LYS D . n D 1 53 LYS 53 1752 52 LYS LYS D . n D 1 54 THR 54 1753 53 THR THR D . n D 1 55 PHE 55 1754 54 PHE PHE D . n D 1 56 GLU 56 1755 55 GLU GLU D . n D 1 57 GLU 57 1756 56 GLU GLU D . n D 1 58 LYS 58 1757 57 LYS LYS D . n D 1 59 LYS 59 1758 58 LYS LYS D . n D 1 60 SER 60 1759 59 SER SER D . n D 1 61 ILE 61 1760 60 ILE ILE D . n D 1 62 LEU 62 1761 61 LEU LEU D . n D 1 63 LYS 63 1762 62 LYS LYS D . n D 1 64 ALA 64 1763 63 ALA ALA D . n D 1 65 GLU 65 1764 64 GLU GLU D . n D 1 66 LEU 66 1765 65 LEU LEU D . n D 1 67 GLU 67 1766 66 GLU GLU D . n D 1 68 ARG 68 1767 67 ARG ARG D . n D 1 69 LYS 69 1768 68 LYS LYS D . n D 1 70 MET 70 1769 69 MET MET D . n D 1 71 ALA 71 1770 70 ALA ALA D . n D 1 72 GLU 72 1771 71 GLU GLU D . n D 1 73 VAL 73 1772 72 VAL VAL D . n D 1 74 GLN 74 1773 73 GLN GLN D . n D 1 75 ALA 75 1774 74 ALA ALA D . n D 1 76 GLU 76 1775 75 GLU GLU D . n D 1 77 PHE 77 1776 76 PHE PHE D . n D 1 78 ARG 78 1777 77 ARG ARG D . n D 1 79 ARG 79 1778 78 ARG ARG D . n D 1 80 LYS 80 1779 79 LYS LYS D . n D 1 81 PHE 81 1780 80 PHE PHE D . n D 1 82 HIS 82 1781 81 HIS HIS D . n D 1 83 GLU 83 1782 82 GLU GLU D . n D 1 84 VAL 84 1783 83 VAL VAL D . n D 1 85 GLU 85 1784 84 GLU GLU D . n D 1 86 ALA 86 1785 85 ALA ALA D . n D 1 87 GLU 87 1786 86 GLU GLU D . n D 1 88 HIS 88 1787 87 HIS HIS D . n D 1 89 ASN 89 1788 88 ASN ASN D . n D 1 90 THR 90 1789 89 THR THR D . n D 1 91 ARG 91 1790 90 ARG ARG D . n D 1 92 THR 92 1791 91 THR THR D . n D 1 93 THR 93 1792 92 THR THR D . n D 1 94 LYS 94 1793 93 LYS LYS D . n D 1 95 ILE 95 1794 94 ILE ILE D . n D 1 96 GLU 96 1795 95 GLU GLU D . n D 1 97 LYS 97 1796 96 LYS LYS D . n D 1 98 ASP 98 1797 97 ASP ASP D . n D 1 99 LYS 99 1798 98 LYS LYS D . n D 1 100 ASN 100 1799 99 ASN ASN D . n D 1 101 LEU 101 1800 100 LEU LEU D . n D 1 102 VAL 102 1801 101 VAL VAL D . n D 1 103 ILE 103 1802 102 ILE ILE D . n D 1 104 MET 104 1803 103 MET MET D . n D 1 105 ASN 105 1804 104 ASN ASN D . n D 1 106 LYS 106 1805 105 LYS LYS D . n D 1 107 LEU 107 1806 106 LEU LEU D . n D 1 108 LEU 108 1807 107 LEU LEU D . n D 1 109 ALA 109 1808 108 ALA ALA D . n D 1 110 ASN 110 1809 109 ASN ASN D . n D 1 111 ALA 111 1810 110 ALA ALA D . n D 1 112 PHE 112 1811 111 PHE PHE D . n D 1 113 LEU 113 1812 ? ? ? D . n D 1 114 SER 114 1813 ? ? ? D . n D 1 115 LYS 115 1814 ? ? ? D . n # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 SHARP phasing . ? 2 PHENIX refinement '(phenix.refine: 1.6.1_353)' ? 3 XDS 'data reduction' . ? 4 XSCALE 'data scaling' . ? 5 # _cell.entry_id 3VEM _cell.length_a 85.640 _cell.length_b 85.640 _cell.length_c 292.740 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3VEM _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3VEM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 5.84 _exptl_crystal.density_percent_sol 78.95 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.1 M Tris, 0.3 M magnesium formate dihydrate, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-4 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3VEM _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 15.0 _reflns.d_resolution_high 3.2 _reflns.number_obs 21107 _reflns.number_all ? _reflns.percent_possible_obs 99.58 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3VEM _refine.ls_number_reflns_obs 21107 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 14.959 _refine.ls_d_res_high 3.200 _refine.ls_percent_reflns_obs 99.58 _refine.ls_R_factor_obs 0.2601 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2584 _refine.ls_R_factor_R_free 0.2932 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.00 _refine.ls_number_reflns_R_free 1055 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -15.0553 _refine.aniso_B[2][2] -15.0553 _refine.aniso_B[3][3] 30.1106 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.305 _refine.solvent_model_param_bsol 81.944 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.47 _refine.pdbx_overall_phase_error 32.92 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2761 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2761 _refine_hist.d_res_high 3.200 _refine_hist.d_res_low 14.959 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.010 ? ? 2799 ? 'X-RAY DIFFRACTION' f_angle_d 1.263 ? ? 3720 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 20.408 ? ? 1127 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.088 ? ? 402 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 481 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 3.2 3.3440 2391 0.3680 98.00 0.3744 . . 126 . . . . 'X-RAY DIFFRACTION' . 3.3440 3.5181 2489 0.3053 100.00 0.3570 . . 131 . . . . 'X-RAY DIFFRACTION' . 3.5181 3.7353 2503 0.2798 100.00 0.3050 . . 132 . . . . 'X-RAY DIFFRACTION' . 3.7353 4.0186 2472 0.2636 100.00 0.3442 . . 129 . . . . 'X-RAY DIFFRACTION' . 4.0186 4.4135 2486 0.2402 100.00 0.3310 . . 131 . . . . 'X-RAY DIFFRACTION' . 4.4135 5.0308 2524 0.2127 100.00 0.2703 . . 132 . . . . 'X-RAY DIFFRACTION' . 5.0308 6.2600 2543 0.3096 100.00 0.3646 . . 134 . . . . 'X-RAY DIFFRACTION' . 6.2600 14.9594 2644 0.2189 99.00 0.2218 . . 140 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3VEM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3VEM _struct.title 'Structural basis of transcriptional gene silencing mediated by Arabidopsis MOM1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3VEM _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'Coiled-coil, hendecad, transcriptional gene silencing, siRNA, nucleus, chromatin, TRANSCRIPTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MOM1_ARATH _struct_ref.pdbx_db_accession Q9M658 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;HSAGVTALVPSLLNNGTEQIAVQPVPQIPFPVFNDPFLHELEKLRRESENSKKTFEEKKSILKAELERKMAEVQAEFRRK FHEVEAEHNTRTTKIEKDKNLVIMNKLLANAFLSK ; _struct_ref.pdbx_align_begin 1700 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3VEM A 1 ? 115 ? Q9M658 1700 ? 1814 ? 1700 1814 2 1 3VEM B 1 ? 115 ? Q9M658 1700 ? 1814 ? 1700 1814 3 1 3VEM C 1 ? 115 ? Q9M658 1700 ? 1814 ? 1700 1814 4 1 3VEM D 1 ? 115 ? Q9M658 1700 ? 1814 ? 1700 1814 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3390 ? 1 MORE -38 ? 1 'SSA (A^2)' 12630 ? 2 'ABSA (A^2)' 3350 ? 2 MORE -38 ? 2 'SSA (A^2)' 12530 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B 2 1 C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 35 ? ALA A 109 ? ASP A 1734 ALA A 1808 1 ? 75 HELX_P HELX_P2 2 ASP B 35 ? ALA B 109 ? ASP B 1734 ALA B 1808 1 ? 75 HELX_P HELX_P3 3 ASP C 35 ? ASN C 110 ? ASP C 1734 ASN C 1809 1 ? 76 HELX_P HELX_P4 4 ASP D 35 ? ALA D 71 ? ASP D 1734 ALA D 1770 1 ? 37 HELX_P HELX_P5 5 ALA D 71 ? ASN D 110 ? ALA D 1770 ASN D 1809 1 ? 40 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 1735 ? ? -69.56 3.49 2 1 PHE A 1736 ? ? -97.68 -62.05 3 1 SER A 1750 ? ? -46.87 -70.46 4 1 LYS A 1758 ? ? -34.89 -35.11 5 1 ILE A 1794 ? ? -36.72 -29.43 6 1 MET A 1803 ? ? -93.96 -60.99 7 1 ALA A 1808 ? ? -67.48 12.07 8 1 LEU A 1812 ? ? -99.88 -60.21 9 1 GLU B 1795 ? ? -33.10 -38.42 10 1 ASN B 1809 ? ? -144.65 28.41 11 1 ALA B 1810 ? ? -106.89 67.95 12 1 LEU B 1812 ? ? -126.38 -163.72 13 1 PRO C 1730 ? ? -35.81 -33.97 14 1 VAL C 1731 ? ? -66.93 71.80 15 1 LYS D 1779 ? ? -39.55 -33.04 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 1700 ? A HIS 1 2 1 Y 1 A SER 1701 ? A SER 2 3 1 Y 1 A ALA 1702 ? A ALA 3 4 1 Y 1 A GLY 1703 ? A GLY 4 5 1 Y 1 A VAL 1704 ? A VAL 5 6 1 Y 1 A THR 1705 ? A THR 6 7 1 Y 1 A ALA 1706 ? A ALA 7 8 1 Y 1 A LEU 1707 ? A LEU 8 9 1 Y 1 A VAL 1708 ? A VAL 9 10 1 Y 1 A PRO 1709 ? A PRO 10 11 1 Y 1 A SER 1710 ? A SER 11 12 1 Y 1 A LEU 1711 ? A LEU 12 13 1 Y 1 A LEU 1712 ? A LEU 13 14 1 Y 1 A ASN 1713 ? A ASN 14 15 1 Y 1 A ASN 1714 ? A ASN 15 16 1 Y 1 A GLY 1715 ? A GLY 16 17 1 Y 1 A THR 1716 ? A THR 17 18 1 Y 1 A GLU 1717 ? A GLU 18 19 1 Y 1 A GLN 1718 ? A GLN 19 20 1 Y 1 A ILE 1719 ? A ILE 20 21 1 Y 1 A ALA 1720 ? A ALA 21 22 1 Y 1 A VAL 1721 ? A VAL 22 23 1 Y 1 A GLN 1722 ? A GLN 23 24 1 Y 1 A PRO 1723 ? A PRO 24 25 1 Y 1 A VAL 1724 ? A VAL 25 26 1 Y 1 A PRO 1725 ? A PRO 26 27 1 Y 1 A GLN 1726 ? A GLN 27 28 1 Y 1 A ILE 1727 ? A ILE 28 29 1 Y 1 A PRO 1728 ? A PRO 29 30 1 Y 1 A PHE 1729 ? A PHE 30 31 1 Y 1 A PRO 1730 ? A PRO 31 32 1 Y 1 A VAL 1731 ? A VAL 32 33 1 Y 1 A LYS 1814 ? A LYS 115 34 1 Y 1 B HIS 1700 ? B HIS 1 35 1 Y 1 B SER 1701 ? B SER 2 36 1 Y 1 B ALA 1702 ? B ALA 3 37 1 Y 1 B GLY 1703 ? B GLY 4 38 1 Y 1 B VAL 1704 ? B VAL 5 39 1 Y 1 B THR 1705 ? B THR 6 40 1 Y 1 B ALA 1706 ? B ALA 7 41 1 Y 1 B LEU 1707 ? B LEU 8 42 1 Y 1 B VAL 1708 ? B VAL 9 43 1 Y 1 B PRO 1709 ? B PRO 10 44 1 Y 1 B SER 1710 ? B SER 11 45 1 Y 1 B LEU 1711 ? B LEU 12 46 1 Y 1 B LEU 1712 ? B LEU 13 47 1 Y 1 B ASN 1713 ? B ASN 14 48 1 Y 1 B ASN 1714 ? B ASN 15 49 1 Y 1 B GLY 1715 ? B GLY 16 50 1 Y 1 B THR 1716 ? B THR 17 51 1 Y 1 B GLU 1717 ? B GLU 18 52 1 Y 1 B GLN 1718 ? B GLN 19 53 1 Y 1 B ILE 1719 ? B ILE 20 54 1 Y 1 B ALA 1720 ? B ALA 21 55 1 Y 1 B VAL 1721 ? B VAL 22 56 1 Y 1 B GLN 1722 ? B GLN 23 57 1 Y 1 B PRO 1723 ? B PRO 24 58 1 Y 1 B VAL 1724 ? B VAL 25 59 1 Y 1 B PRO 1725 ? B PRO 26 60 1 Y 1 B GLN 1726 ? B GLN 27 61 1 Y 1 B ILE 1727 ? B ILE 28 62 1 Y 1 B PRO 1728 ? B PRO 29 63 1 Y 1 B PHE 1729 ? B PHE 30 64 1 Y 1 B PRO 1730 ? B PRO 31 65 1 Y 1 B VAL 1731 ? B VAL 32 66 1 Y 1 B LYS 1814 ? B LYS 115 67 1 Y 1 C HIS 1700 ? C HIS 1 68 1 Y 1 C SER 1701 ? C SER 2 69 1 Y 1 C ALA 1702 ? C ALA 3 70 1 Y 1 C GLY 1703 ? C GLY 4 71 1 Y 1 C VAL 1704 ? C VAL 5 72 1 Y 1 C THR 1705 ? C THR 6 73 1 Y 1 C ALA 1706 ? C ALA 7 74 1 Y 1 C LEU 1707 ? C LEU 8 75 1 Y 1 C VAL 1708 ? C VAL 9 76 1 Y 1 C PRO 1709 ? C PRO 10 77 1 Y 1 C SER 1710 ? C SER 11 78 1 Y 1 C LEU 1711 ? C LEU 12 79 1 Y 1 C LEU 1712 ? C LEU 13 80 1 Y 1 C ASN 1713 ? C ASN 14 81 1 Y 1 C ASN 1714 ? C ASN 15 82 1 Y 1 C GLY 1715 ? C GLY 16 83 1 Y 1 C THR 1716 ? C THR 17 84 1 Y 1 C GLU 1717 ? C GLU 18 85 1 Y 1 C GLN 1718 ? C GLN 19 86 1 Y 1 C ILE 1719 ? C ILE 20 87 1 Y 1 C ALA 1720 ? C ALA 21 88 1 Y 1 C VAL 1721 ? C VAL 22 89 1 Y 1 C GLN 1722 ? C GLN 23 90 1 Y 1 C PRO 1723 ? C PRO 24 91 1 Y 1 C VAL 1724 ? C VAL 25 92 1 Y 1 C PRO 1725 ? C PRO 26 93 1 Y 1 C GLN 1726 ? C GLN 27 94 1 Y 1 C ILE 1727 ? C ILE 28 95 1 Y 1 C PRO 1728 ? C PRO 29 96 1 Y 1 C LEU 1812 ? C LEU 113 97 1 Y 1 C SER 1813 ? C SER 114 98 1 Y 1 C LYS 1814 ? C LYS 115 99 1 Y 1 D HIS 1700 ? D HIS 1 100 1 Y 1 D SER 1701 ? D SER 2 101 1 Y 1 D ALA 1702 ? D ALA 3 102 1 Y 1 D GLY 1703 ? D GLY 4 103 1 Y 1 D VAL 1704 ? D VAL 5 104 1 Y 1 D THR 1705 ? D THR 6 105 1 Y 1 D ALA 1706 ? D ALA 7 106 1 Y 1 D LEU 1707 ? D LEU 8 107 1 Y 1 D VAL 1708 ? D VAL 9 108 1 Y 1 D PRO 1709 ? D PRO 10 109 1 Y 1 D SER 1710 ? D SER 11 110 1 Y 1 D LEU 1711 ? D LEU 12 111 1 Y 1 D LEU 1712 ? D LEU 13 112 1 Y 1 D ASN 1713 ? D ASN 14 113 1 Y 1 D ASN 1714 ? D ASN 15 114 1 Y 1 D GLY 1715 ? D GLY 16 115 1 Y 1 D THR 1716 ? D THR 17 116 1 Y 1 D GLU 1717 ? D GLU 18 117 1 Y 1 D GLN 1718 ? D GLN 19 118 1 Y 1 D ILE 1719 ? D ILE 20 119 1 Y 1 D ALA 1720 ? D ALA 21 120 1 Y 1 D VAL 1721 ? D VAL 22 121 1 Y 1 D GLN 1722 ? D GLN 23 122 1 Y 1 D PRO 1723 ? D PRO 24 123 1 Y 1 D VAL 1724 ? D VAL 25 124 1 Y 1 D PRO 1725 ? D PRO 26 125 1 Y 1 D GLN 1726 ? D GLN 27 126 1 Y 1 D ILE 1727 ? D ILE 28 127 1 Y 1 D PRO 1728 ? D PRO 29 128 1 Y 1 D PHE 1729 ? D PHE 30 129 1 Y 1 D PRO 1730 ? D PRO 31 130 1 Y 1 D VAL 1731 ? D VAL 32 131 1 Y 1 D LEU 1812 ? D LEU 113 132 1 Y 1 D SER 1813 ? D SER 114 133 1 Y 1 D LYS 1814 ? D LYS 115 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 PHE N N N N 233 PHE CA C N S 234 PHE C C N N 235 PHE O O N N 236 PHE CB C N N 237 PHE CG C Y N 238 PHE CD1 C Y N 239 PHE CD2 C Y N 240 PHE CE1 C Y N 241 PHE CE2 C Y N 242 PHE CZ C Y N 243 PHE OXT O N N 244 PHE H H N N 245 PHE H2 H N N 246 PHE HA H N N 247 PHE HB2 H N N 248 PHE HB3 H N N 249 PHE HD1 H N N 250 PHE HD2 H N N 251 PHE HE1 H N N 252 PHE HE2 H N N 253 PHE HZ H N N 254 PHE HXT H N N 255 PRO N N N N 256 PRO CA C N S 257 PRO C C N N 258 PRO O O N N 259 PRO CB C N N 260 PRO CG C N N 261 PRO CD C N N 262 PRO OXT O N N 263 PRO H H N N 264 PRO HA H N N 265 PRO HB2 H N N 266 PRO HB3 H N N 267 PRO HG2 H N N 268 PRO HG3 H N N 269 PRO HD2 H N N 270 PRO HD3 H N N 271 PRO HXT H N N 272 SER N N N N 273 SER CA C N S 274 SER C C N N 275 SER O O N N 276 SER CB C N N 277 SER OG O N N 278 SER OXT O N N 279 SER H H N N 280 SER H2 H N N 281 SER HA H N N 282 SER HB2 H N N 283 SER HB3 H N N 284 SER HG H N N 285 SER HXT H N N 286 THR N N N N 287 THR CA C N S 288 THR C C N N 289 THR O O N N 290 THR CB C N R 291 THR OG1 O N N 292 THR CG2 C N N 293 THR OXT O N N 294 THR H H N N 295 THR H2 H N N 296 THR HA H N N 297 THR HB H N N 298 THR HG1 H N N 299 THR HG21 H N N 300 THR HG22 H N N 301 THR HG23 H N N 302 THR HXT H N N 303 VAL N N N N 304 VAL CA C N S 305 VAL C C N N 306 VAL O O N N 307 VAL CB C N N 308 VAL CG1 C N N 309 VAL CG2 C N N 310 VAL OXT O N N 311 VAL H H N N 312 VAL H2 H N N 313 VAL HA H N N 314 VAL HB H N N 315 VAL HG11 H N N 316 VAL HG12 H N N 317 VAL HG13 H N N 318 VAL HG21 H N N 319 VAL HG22 H N N 320 VAL HG23 H N N 321 VAL HXT H N N 322 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 PRO N CA sing N N 245 PRO N CD sing N N 246 PRO N H sing N N 247 PRO CA C sing N N 248 PRO CA CB sing N N 249 PRO CA HA sing N N 250 PRO C O doub N N 251 PRO C OXT sing N N 252 PRO CB CG sing N N 253 PRO CB HB2 sing N N 254 PRO CB HB3 sing N N 255 PRO CG CD sing N N 256 PRO CG HG2 sing N N 257 PRO CG HG3 sing N N 258 PRO CD HD2 sing N N 259 PRO CD HD3 sing N N 260 PRO OXT HXT sing N N 261 SER N CA sing N N 262 SER N H sing N N 263 SER N H2 sing N N 264 SER CA C sing N N 265 SER CA CB sing N N 266 SER CA HA sing N N 267 SER C O doub N N 268 SER C OXT sing N N 269 SER CB OG sing N N 270 SER CB HB2 sing N N 271 SER CB HB3 sing N N 272 SER OG HG sing N N 273 SER OXT HXT sing N N 274 THR N CA sing N N 275 THR N H sing N N 276 THR N H2 sing N N 277 THR CA C sing N N 278 THR CA CB sing N N 279 THR CA HA sing N N 280 THR C O doub N N 281 THR C OXT sing N N 282 THR CB OG1 sing N N 283 THR CB CG2 sing N N 284 THR CB HB sing N N 285 THR OG1 HG1 sing N N 286 THR CG2 HG21 sing N N 287 THR CG2 HG22 sing N N 288 THR CG2 HG23 sing N N 289 THR OXT HXT sing N N 290 VAL N CA sing N N 291 VAL N H sing N N 292 VAL N H2 sing N N 293 VAL CA C sing N N 294 VAL CA CB sing N N 295 VAL CA HA sing N N 296 VAL C O doub N N 297 VAL C OXT sing N N 298 VAL CB CG1 sing N N 299 VAL CB CG2 sing N N 300 VAL CB HB sing N N 301 VAL CG1 HG11 sing N N 302 VAL CG1 HG12 sing N N 303 VAL CG1 HG13 sing N N 304 VAL CG2 HG21 sing N N 305 VAL CG2 HG22 sing N N 306 VAL CG2 HG23 sing N N 307 VAL OXT HXT sing N N 308 # _atom_sites.entry_id 3VEM _atom_sites.fract_transf_matrix[1][1] 0.011677 _atom_sites.fract_transf_matrix[1][2] 0.006742 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013483 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003416 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_