data_3VIE # _entry.id 3VIE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3VIE pdb_00003vie 10.2210/pdb3vie/pdb RCSB RCSB095082 ? ? WWPDB D_1000095082 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-01-18 2 'Structure model' 1 1 2012-02-29 3 'Structure model' 1 2 2013-07-24 4 'Structure model' 1 3 2023-11-08 5 'Structure model' 1 4 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref_seq_dif 7 5 'Structure model' pdbx_entry_details 8 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3VIE _pdbx_database_status.recvd_initial_deposition_date 2011-09-29 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yao, X.' 1 'Waltersperger, S.' 2 'Wang, M.T.' 3 'Cui, S.' 4 # _citation.id primary _citation.title 'Broad antiviral activity and crystal structure of HIV-1 fusion inhibitor sifuvirtide' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 287 _citation.page_first 6788 _citation.page_last 6796 _citation.year 2012 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22228771 _citation.pdbx_database_id_DOI 10.1074/jbc.M111.317883 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yao, X.' 1 ? primary 'Chong, H.' 2 ? primary 'Zhang, C.' 3 ? primary 'Waltersperger, S.' 4 ? primary 'Wang, M.' 5 ? primary 'Cui, S.' 6 ? primary 'He, Y.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Envelope glycoprotein gp160' 4152.843 3 ? ? 'NHR domain, UNP residues 554-589' ? 2 polymer syn Sifuvirtide 4717.020 3 ? ? ? ? 3 water nat water 18.015 93 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes '(ACE)SGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARIL' XSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARIL A,C,E ? 2 'polypeptide(L)' no yes '(ACE)SWETWEREIENYTRQIYRILEESQEQQDRNERDLLE' XSWETWEREIENYTRQIYRILEESQEQQDRNERDLLE B,D,F ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 SER n 1 3 GLY n 1 4 ILE n 1 5 VAL n 1 6 GLN n 1 7 GLN n 1 8 GLN n 1 9 ASN n 1 10 ASN n 1 11 LEU n 1 12 LEU n 1 13 ARG n 1 14 ALA n 1 15 ILE n 1 16 GLU n 1 17 ALA n 1 18 GLN n 1 19 GLN n 1 20 HIS n 1 21 LEU n 1 22 LEU n 1 23 GLN n 1 24 LEU n 1 25 THR n 1 26 VAL n 1 27 TRP n 1 28 GLY n 1 29 ILE n 1 30 LYS n 1 31 GLN n 1 32 LEU n 1 33 GLN n 1 34 ALA n 1 35 ARG n 1 36 ILE n 1 37 LEU n 2 1 ACE n 2 2 SER n 2 3 TRP n 2 4 GLU n 2 5 THR n 2 6 TRP n 2 7 GLU n 2 8 ARG n 2 9 GLU n 2 10 ILE n 2 11 GLU n 2 12 ASN n 2 13 TYR n 2 14 THR n 2 15 ARG n 2 16 GLN n 2 17 ILE n 2 18 TYR n 2 19 ARG n 2 20 ILE n 2 21 LEU n 2 22 GLU n 2 23 GLU n 2 24 SER n 2 25 GLN n 2 26 GLU n 2 27 GLN n 2 28 GLN n 2 29 ASP n 2 30 ARG n 2 31 ASN n 2 32 GLU n 2 33 ARG n 2 34 ASP n 2 35 LEU n 2 36 LEU n 2 37 GLU n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? 'Human immunodeficiency virus 1' ? 11676 'NHR 35-70 sequence occurs naturally in HIV-1' 2 1 sample ? ? ? ? ? 'Sequence of Sifuvirtide has been designed based on sequence of HIV-1 gp41 CHR' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 34 34 ACE ACE A . n A 1 2 SER 2 35 35 SER SER A . n A 1 3 GLY 3 36 36 GLY GLY A . n A 1 4 ILE 4 37 37 ILE ILE A . n A 1 5 VAL 5 38 38 VAL VAL A . n A 1 6 GLN 6 39 39 GLN GLN A . n A 1 7 GLN 7 40 40 GLN GLN A . n A 1 8 GLN 8 41 41 GLN GLN A . n A 1 9 ASN 9 42 42 ASN ASN A . n A 1 10 ASN 10 43 43 ASN ASN A . n A 1 11 LEU 11 44 44 LEU LEU A . n A 1 12 LEU 12 45 45 LEU LEU A . n A 1 13 ARG 13 46 46 ARG ARG A . n A 1 14 ALA 14 47 47 ALA ALA A . n A 1 15 ILE 15 48 48 ILE ILE A . n A 1 16 GLU 16 49 49 GLU GLU A . n A 1 17 ALA 17 50 50 ALA ALA A . n A 1 18 GLN 18 51 51 GLN GLN A . n A 1 19 GLN 19 52 52 GLN GLN A . n A 1 20 HIS 20 53 53 HIS HIS A . n A 1 21 LEU 21 54 54 LEU LEU A . n A 1 22 LEU 22 55 55 LEU LEU A . n A 1 23 GLN 23 56 56 GLN GLN A . n A 1 24 LEU 24 57 57 LEU LEU A . n A 1 25 THR 25 58 58 THR THR A . n A 1 26 VAL 26 59 59 VAL VAL A . n A 1 27 TRP 27 60 60 TRP TRP A . n A 1 28 GLY 28 61 61 GLY GLY A . n A 1 29 ILE 29 62 62 ILE ILE A . n A 1 30 LYS 30 63 63 LYS LYS A . n A 1 31 GLN 31 64 64 GLN GLN A . n A 1 32 LEU 32 65 65 LEU LEU A . n A 1 33 GLN 33 66 66 GLN GLN A . n A 1 34 ALA 34 67 67 ALA ALA A . n A 1 35 ARG 35 68 68 ARG ARG A . n A 1 36 ILE 36 69 69 ILE ILE A . n A 1 37 LEU 37 70 ? ? ? A . n B 1 1 ACE 1 34 34 ACE ACE C . n B 1 2 SER 2 35 35 SER SER C . n B 1 3 GLY 3 36 36 GLY GLY C . n B 1 4 ILE 4 37 37 ILE ILE C . n B 1 5 VAL 5 38 38 VAL VAL C . n B 1 6 GLN 6 39 39 GLN GLN C . n B 1 7 GLN 7 40 40 GLN GLN C . n B 1 8 GLN 8 41 41 GLN GLN C . n B 1 9 ASN 9 42 42 ASN ASN C . n B 1 10 ASN 10 43 43 ASN ASN C . n B 1 11 LEU 11 44 44 LEU LEU C . n B 1 12 LEU 12 45 45 LEU LEU C . n B 1 13 ARG 13 46 46 ARG ARG C . n B 1 14 ALA 14 47 47 ALA ALA C . n B 1 15 ILE 15 48 48 ILE ILE C . n B 1 16 GLU 16 49 49 GLU GLU C . n B 1 17 ALA 17 50 50 ALA ALA C . n B 1 18 GLN 18 51 51 GLN GLN C . n B 1 19 GLN 19 52 52 GLN GLN C . n B 1 20 HIS 20 53 53 HIS HIS C . n B 1 21 LEU 21 54 54 LEU LEU C . n B 1 22 LEU 22 55 55 LEU LEU C . n B 1 23 GLN 23 56 56 GLN GLN C . n B 1 24 LEU 24 57 57 LEU LEU C . n B 1 25 THR 25 58 58 THR THR C . n B 1 26 VAL 26 59 59 VAL VAL C . n B 1 27 TRP 27 60 60 TRP TRP C . n B 1 28 GLY 28 61 61 GLY GLY C . n B 1 29 ILE 29 62 62 ILE ILE C . n B 1 30 LYS 30 63 63 LYS LYS C . n B 1 31 GLN 31 64 64 GLN GLN C . n B 1 32 LEU 32 65 65 LEU LEU C . n B 1 33 GLN 33 66 66 GLN GLN C . n B 1 34 ALA 34 67 67 ALA ALA C . n B 1 35 ARG 35 68 68 ARG ARG C . n B 1 36 ILE 36 69 69 ILE ILE C . n B 1 37 LEU 37 70 70 LEU LEU C . n C 1 1 ACE 1 34 34 ACE ACE E . n C 1 2 SER 2 35 35 SER SER E . n C 1 3 GLY 3 36 36 GLY GLY E . n C 1 4 ILE 4 37 37 ILE ILE E . n C 1 5 VAL 5 38 38 VAL VAL E . n C 1 6 GLN 6 39 39 GLN GLN E . n C 1 7 GLN 7 40 40 GLN GLN E . n C 1 8 GLN 8 41 41 GLN GLN E . n C 1 9 ASN 9 42 42 ASN ASN E . n C 1 10 ASN 10 43 43 ASN ASN E . n C 1 11 LEU 11 44 44 LEU LEU E . n C 1 12 LEU 12 45 45 LEU LEU E . n C 1 13 ARG 13 46 46 ARG ARG E . n C 1 14 ALA 14 47 47 ALA ALA E . n C 1 15 ILE 15 48 48 ILE ILE E . n C 1 16 GLU 16 49 49 GLU GLU E . n C 1 17 ALA 17 50 50 ALA ALA E . n C 1 18 GLN 18 51 51 GLN GLN E . n C 1 19 GLN 19 52 52 GLN GLN E . n C 1 20 HIS 20 53 53 HIS HIS E . n C 1 21 LEU 21 54 54 LEU LEU E . n C 1 22 LEU 22 55 55 LEU LEU E . n C 1 23 GLN 23 56 56 GLN GLN E . n C 1 24 LEU 24 57 57 LEU LEU E . n C 1 25 THR 25 58 58 THR THR E . n C 1 26 VAL 26 59 59 VAL VAL E . n C 1 27 TRP 27 60 60 TRP TRP E . n C 1 28 GLY 28 61 61 GLY GLY E . n C 1 29 ILE 29 62 62 ILE ILE E . n C 1 30 LYS 30 63 63 LYS LYS E . n C 1 31 GLN 31 64 64 GLN GLN E . n C 1 32 LEU 32 65 65 LEU LEU E . n C 1 33 GLN 33 66 66 GLN GLN E . n C 1 34 ALA 34 67 67 ALA ALA E . n C 1 35 ARG 35 68 68 ARG ARG E . n C 1 36 ILE 36 69 69 ILE ILE E . n C 1 37 LEU 37 70 70 LEU LEU E . n D 2 1 ACE 1 115 115 ACE ACE B . n D 2 2 SER 2 116 116 SER SER B . n D 2 3 TRP 3 117 117 TRP TRP B . n D 2 4 GLU 4 118 118 GLU GLU B . n D 2 5 THR 5 119 119 THR THR B . n D 2 6 TRP 6 120 120 TRP TRP B . n D 2 7 GLU 7 121 121 GLU GLU B . n D 2 8 ARG 8 122 122 ARG ARG B . n D 2 9 GLU 9 123 123 GLU GLU B . n D 2 10 ILE 10 124 124 ILE ILE B . n D 2 11 GLU 11 125 125 GLU GLU B . n D 2 12 ASN 12 126 126 ASN ASN B . n D 2 13 TYR 13 127 127 TYR TYR B . n D 2 14 THR 14 128 128 THR THR B . n D 2 15 ARG 15 129 129 ARG ARG B . n D 2 16 GLN 16 130 130 GLN GLN B . n D 2 17 ILE 17 131 131 ILE ILE B . n D 2 18 TYR 18 132 132 TYR TYR B . n D 2 19 ARG 19 133 133 ARG ARG B . n D 2 20 ILE 20 134 134 ILE ILE B . n D 2 21 LEU 21 135 135 LEU LEU B . n D 2 22 GLU 22 136 136 GLU GLU B . n D 2 23 GLU 23 137 137 GLU GLU B . n D 2 24 SER 24 138 138 SER SER B . n D 2 25 GLN 25 139 139 GLN GLN B . n D 2 26 GLU 26 140 140 GLU GLU B . n D 2 27 GLN 27 141 141 GLN GLN B . n D 2 28 GLN 28 142 142 GLN GLN B . n D 2 29 ASP 29 143 143 ASP ASP B . n D 2 30 ARG 30 144 144 ARG ARG B . n D 2 31 ASN 31 145 145 ASN ASN B . n D 2 32 GLU 32 146 146 GLU GLU B . n D 2 33 ARG 33 147 147 ARG ARG B . n D 2 34 ASP 34 148 148 ASP ASP B . n D 2 35 LEU 35 149 149 LEU LEU B . n D 2 36 LEU 36 150 150 LEU LEU B . n D 2 37 GLU 37 151 151 GLU GLU B . n E 2 1 ACE 1 115 115 ACE ACE D . n E 2 2 SER 2 116 116 SER SER D . n E 2 3 TRP 3 117 117 TRP TRP D . n E 2 4 GLU 4 118 118 GLU GLU D . n E 2 5 THR 5 119 119 THR THR D . n E 2 6 TRP 6 120 120 TRP TRP D . n E 2 7 GLU 7 121 121 GLU GLU D . n E 2 8 ARG 8 122 122 ARG ARG D . n E 2 9 GLU 9 123 123 GLU GLU D . n E 2 10 ILE 10 124 124 ILE ILE D . n E 2 11 GLU 11 125 125 GLU GLU D . n E 2 12 ASN 12 126 126 ASN ASN D . n E 2 13 TYR 13 127 127 TYR TYR D . n E 2 14 THR 14 128 128 THR THR D . n E 2 15 ARG 15 129 129 ARG ARG D . n E 2 16 GLN 16 130 130 GLN GLN D . n E 2 17 ILE 17 131 131 ILE ILE D . n E 2 18 TYR 18 132 132 TYR TYR D . n E 2 19 ARG 19 133 133 ARG ARG D . n E 2 20 ILE 20 134 134 ILE ILE D . n E 2 21 LEU 21 135 135 LEU LEU D . n E 2 22 GLU 22 136 136 GLU GLU D . n E 2 23 GLU 23 137 137 GLU GLU D . n E 2 24 SER 24 138 138 SER SER D . n E 2 25 GLN 25 139 139 GLN GLN D . n E 2 26 GLU 26 140 140 GLU GLU D . n E 2 27 GLN 27 141 141 GLN GLN D . n E 2 28 GLN 28 142 142 GLN GLN D . n E 2 29 ASP 29 143 143 ASP ASP D . n E 2 30 ARG 30 144 144 ARG ARG D . n E 2 31 ASN 31 145 145 ASN ASN D . n E 2 32 GLU 32 146 146 GLU GLU D . n E 2 33 ARG 33 147 147 ARG ARG D . n E 2 34 ASP 34 148 148 ASP ASP D . n E 2 35 LEU 35 149 149 LEU LEU D . n E 2 36 LEU 36 150 150 LEU LEU D . n E 2 37 GLU 37 151 151 GLU GLU D . n F 2 1 ACE 1 115 115 ACE ACE F . n F 2 2 SER 2 116 116 SER SER F . n F 2 3 TRP 3 117 117 TRP TRP F . n F 2 4 GLU 4 118 118 GLU GLU F . n F 2 5 THR 5 119 119 THR THR F . n F 2 6 TRP 6 120 120 TRP TRP F . n F 2 7 GLU 7 121 121 GLU GLU F . n F 2 8 ARG 8 122 122 ARG ARG F . n F 2 9 GLU 9 123 123 GLU GLU F . n F 2 10 ILE 10 124 124 ILE ILE F . n F 2 11 GLU 11 125 125 GLU GLU F . n F 2 12 ASN 12 126 126 ASN ASN F . n F 2 13 TYR 13 127 127 TYR TYR F . n F 2 14 THR 14 128 128 THR THR F . n F 2 15 ARG 15 129 129 ARG ARG F . n F 2 16 GLN 16 130 130 GLN GLN F . n F 2 17 ILE 17 131 131 ILE ILE F . n F 2 18 TYR 18 132 132 TYR TYR F . n F 2 19 ARG 19 133 133 ARG ARG F . n F 2 20 ILE 20 134 134 ILE ILE F . n F 2 21 LEU 21 135 135 LEU LEU F . n F 2 22 GLU 22 136 136 GLU GLU F . n F 2 23 GLU 23 137 137 GLU GLU F . n F 2 24 SER 24 138 138 SER SER F . n F 2 25 GLN 25 139 139 GLN GLN F . n F 2 26 GLU 26 140 140 GLU GLU F . n F 2 27 GLN 27 141 141 GLN GLN F . n F 2 28 GLN 28 142 142 GLN GLN F . n F 2 29 ASP 29 143 143 ASP ASP F . n F 2 30 ARG 30 144 144 ARG ARG F . n F 2 31 ASN 31 145 145 ASN ASN F . n F 2 32 GLU 32 146 146 GLU GLU F . n F 2 33 ARG 33 147 147 ARG ARG F . n F 2 34 ASP 34 148 148 ASP ASP F . n F 2 35 LEU 35 149 149 LEU LEU F . n F 2 36 LEU 36 150 150 LEU LEU F . n F 2 37 GLU 37 151 151 GLU GLU F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 HOH 1 1 1 HOH HOH A . G 3 HOH 2 2 2 HOH HOH A . G 3 HOH 3 3 3 HOH HOH A . G 3 HOH 4 4 4 HOH HOH A . G 3 HOH 5 5 5 HOH HOH A . G 3 HOH 6 6 6 HOH HOH A . G 3 HOH 7 7 7 HOH HOH A . G 3 HOH 8 8 8 HOH HOH A . G 3 HOH 9 9 9 HOH HOH A . G 3 HOH 10 10 10 HOH HOH A . G 3 HOH 11 11 11 HOH HOH A . G 3 HOH 12 12 12 HOH HOH A . G 3 HOH 13 13 13 HOH HOH A . G 3 HOH 14 14 14 HOH HOH A . G 3 HOH 15 15 15 HOH HOH A . G 3 HOH 16 16 16 HOH HOH A . G 3 HOH 17 17 17 HOH HOH A . G 3 HOH 18 19 19 HOH HOH A . G 3 HOH 19 22 22 HOH HOH A . G 3 HOH 20 71 38 HOH HOH A . G 3 HOH 21 89 89 HOH HOH A . G 3 HOH 22 90 90 HOH HOH A . G 3 HOH 23 93 93 HOH HOH A . H 3 HOH 1 23 23 HOH HOH C . H 3 HOH 2 24 24 HOH HOH C . H 3 HOH 3 25 25 HOH HOH C . H 3 HOH 4 26 26 HOH HOH C . H 3 HOH 5 27 27 HOH HOH C . H 3 HOH 6 28 28 HOH HOH C . H 3 HOH 7 29 29 HOH HOH C . H 3 HOH 8 30 30 HOH HOH C . H 3 HOH 9 31 31 HOH HOH C . H 3 HOH 10 32 32 HOH HOH C . H 3 HOH 11 33 33 HOH HOH C . H 3 HOH 12 71 34 HOH HOH C . H 3 HOH 13 72 35 HOH HOH C . H 3 HOH 14 73 36 HOH HOH C . H 3 HOH 15 77 44 HOH HOH C . H 3 HOH 16 81 81 HOH HOH C . H 3 HOH 17 83 83 HOH HOH C . H 3 HOH 18 84 84 HOH HOH C . H 3 HOH 19 91 91 HOH HOH C . I 3 HOH 1 71 37 HOH HOH E . I 3 HOH 2 72 39 HOH HOH E . I 3 HOH 3 73 40 HOH HOH E . I 3 HOH 4 74 41 HOH HOH E . I 3 HOH 5 75 42 HOH HOH E . I 3 HOH 6 76 43 HOH HOH E . I 3 HOH 7 78 45 HOH HOH E . I 3 HOH 8 79 46 HOH HOH E . I 3 HOH 9 80 80 HOH HOH E . I 3 HOH 10 81 47 HOH HOH E . I 3 HOH 11 82 48 HOH HOH E . I 3 HOH 12 86 86 HOH HOH E . I 3 HOH 13 87 87 HOH HOH E . J 3 HOH 1 18 18 HOH HOH B . J 3 HOH 2 49 49 HOH HOH B . J 3 HOH 3 50 50 HOH HOH B . J 3 HOH 4 51 51 HOH HOH B . J 3 HOH 5 52 52 HOH HOH B . J 3 HOH 6 53 53 HOH HOH B . J 3 HOH 7 54 54 HOH HOH B . J 3 HOH 8 55 55 HOH HOH B . J 3 HOH 9 56 56 HOH HOH B . J 3 HOH 10 57 57 HOH HOH B . J 3 HOH 11 58 58 HOH HOH B . J 3 HOH 12 78 78 HOH HOH B . J 3 HOH 13 92 92 HOH HOH B . K 3 HOH 1 59 59 HOH HOH D . K 3 HOH 2 60 60 HOH HOH D . K 3 HOH 3 61 61 HOH HOH D . K 3 HOH 4 62 62 HOH HOH D . K 3 HOH 5 63 63 HOH HOH D . K 3 HOH 6 64 64 HOH HOH D . K 3 HOH 7 65 65 HOH HOH D . K 3 HOH 8 66 66 HOH HOH D . K 3 HOH 9 79 79 HOH HOH D . K 3 HOH 10 85 85 HOH HOH D . L 3 HOH 1 20 20 HOH HOH F . L 3 HOH 2 21 21 HOH HOH F . L 3 HOH 3 67 67 HOH HOH F . L 3 HOH 4 68 68 HOH HOH F . L 3 HOH 5 69 69 HOH HOH F . L 3 HOH 6 70 70 HOH HOH F . L 3 HOH 7 71 71 HOH HOH F . L 3 HOH 8 72 72 HOH HOH F . L 3 HOH 9 73 73 HOH HOH F . L 3 HOH 10 74 74 HOH HOH F . L 3 HOH 11 75 75 HOH HOH F . L 3 HOH 12 76 76 HOH HOH F . L 3 HOH 13 77 77 HOH HOH F . L 3 HOH 14 82 82 HOH HOH F . L 3 HOH 15 88 88 HOH HOH F . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 D TRP 117 ? CA A E TRP 3 CA 2 1 Y 0 D TRP 117 ? CB A E TRP 3 CB 3 1 Y 0 D TRP 117 ? CG A E TRP 3 CG 4 1 Y 0 D TRP 117 ? CD1 A E TRP 3 CD1 5 1 Y 0 D TRP 117 ? CD2 A E TRP 3 CD2 6 1 Y 0 D TRP 117 ? NE1 A E TRP 3 NE1 7 1 Y 0 D TRP 117 ? CE2 A E TRP 3 CE2 8 1 Y 0 D TRP 117 ? CE3 A E TRP 3 CE3 9 1 Y 0 D TRP 117 ? CZ2 A E TRP 3 CZ2 10 1 Y 0 D TRP 117 ? CZ3 A E TRP 3 CZ3 11 1 Y 0 D TRP 117 ? CH2 A E TRP 3 CH2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal RemDAq 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.6.1_357)' ? 3 XDS 'data reduction' package ? 4 XDS 'data scaling' package ? 5 # _cell.entry_id 3VIE _cell.length_a 88.787 _cell.length_b 49.179 _cell.length_c 55.818 _cell.angle_alpha 90.00 _cell.angle_beta 90.65 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3VIE _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3VIE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.29 _exptl_crystal.density_percent_sol 46.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1M Tris HCl, 10% w/v PEG 4000, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2011-08-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Bartels Monochromator Crystal Type Si (111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3VIE _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F -3.0 _reflns.d_resolution_low 44.391 _reflns.d_resolution_high 1.701 _reflns.number_obs 24817 _reflns.number_all ? _reflns.percent_possible_obs 93.1 _reflns.pdbx_Rmerge_I_obs 0.034 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.53 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.18 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.701 _reflns_shell.d_res_low 1.80 _reflns_shell.percent_possible_all 63.3 _reflns_shell.Rmerge_I_obs 0.245 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.51 _reflns_shell.pdbx_redundancy 1.24 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3VIE _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 22201 _refine.ls_number_reflns_all 24817 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.81 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.936 _refine.ls_d_res_high 1.800 _refine.ls_percent_reflns_obs 98.81 _refine.ls_R_factor_obs 0.1837 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1818 _refine.ls_R_factor_R_free 0.2187 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.00 _refine.ls_number_reflns_R_free 1109 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 31.7329 _refine.aniso_B[1][1] 0.7408 _refine.aniso_B[2][2] 6.6726 _refine.aniso_B[3][3] -7.4134 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -2.8535 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.463 _refine.solvent_model_param_bsol 64.439 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1ENV' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.25 _refine.B_iso_max 113.700 _refine.B_iso_min 12.280 _refine.pdbx_overall_phase_error 22.2200 _refine.occupancy_max 1.000 _refine.occupancy_min 0.000 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1870 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 93 _refine_hist.number_atoms_total 1963 _refine_hist.d_res_high 1.800 _refine_hist.d_res_low 34.936 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.018 ? ? 2210 'X-RAY DIFFRACTION' ? f_angle_d 1.490 ? ? 3016 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 16.919 ? ? 926 'X-RAY DIFFRACTION' ? f_chiral_restr 0.117 ? ? 312 'X-RAY DIFFRACTION' ? f_plane_restr 0.006 ? ? 410 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 1.8000 1.8820 8 92.0000 2435 . 0.2010 0.2576 . 129 . 2564 . 'X-RAY DIFFRACTION' . 1.8820 1.9812 8 100.0000 2633 . 0.1846 0.2250 . 138 . 2771 . 'X-RAY DIFFRACTION' . 1.9812 2.1053 8 100.0000 2662 . 0.1675 0.2434 . 141 . 2803 . 'X-RAY DIFFRACTION' . 2.1053 2.2678 8 100.0000 2637 . 0.1571 0.2170 . 138 . 2775 . 'X-RAY DIFFRACTION' . 2.2678 2.4960 8 100.0000 2667 . 0.1560 0.2398 . 141 . 2808 . 'X-RAY DIFFRACTION' . 2.4960 2.8570 8 100.0000 2671 . 0.1687 0.2062 . 140 . 2811 . 'X-RAY DIFFRACTION' . 2.8570 3.5989 8 100.0000 2685 . 0.1585 0.2025 . 142 . 2827 . 'X-RAY DIFFRACTION' . 3.5989 34.9425 8 99.0000 2702 . 0.2122 0.2139 . 140 . 2842 . 'X-RAY DIFFRACTION' . # _database_PDB_matrix.entry_id 3VIE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3VIE _struct.title 'HIV-gp41 fusion inhibitor Sifuvirtide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3VIE _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/ANTIVIRAL PROTEIN' _struct_keywords.text '6-helix bundle, membrane fusion inhibition, HIV, VIRAL PROTEIN-ANTIVIRAL PROTEIN complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q9YP39_9HIV1 Q9YP39 1 SGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARIL 554 ? 2 PDB 3VIE 3VIE 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3VIE A 2 ? 37 ? Q9YP39 554 ? 589 ? 35 70 2 1 3VIE C 2 ? 37 ? Q9YP39 554 ? 589 ? 35 70 3 1 3VIE E 2 ? 37 ? Q9YP39 554 ? 589 ? 35 70 4 2 3VIE B 1 ? 37 ? 3VIE 115 ? 151 ? 115 151 5 2 3VIE D 1 ? 37 ? 3VIE 115 ? 151 ? 115 151 6 2 3VIE F 1 ? 37 ? 3VIE 115 ? 151 ? 115 151 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3VIE ACE A 1 ? UNP Q9YP39 ? ? acetylation 34 1 2 3VIE ACE C 1 ? UNP Q9YP39 ? ? acetylation 34 2 3 3VIE ACE E 1 ? UNP Q9YP39 ? ? acetylation 34 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 12010 ? 1 MORE -96 ? 1 'SSA (A^2)' 11480 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 2 ? ILE A 36 ? SER A 35 ILE A 69 1 ? 35 HELX_P HELX_P2 2 SER B 2 ? LEU B 37 ? SER C 35 LEU C 70 1 ? 36 HELX_P HELX_P3 3 SER C 2 ? LEU C 37 ? SER E 35 LEU E 70 1 ? 36 HELX_P HELX_P4 4 SER D 2 ? GLU D 37 ? SER B 116 GLU B 151 1 ? 36 HELX_P HELX_P5 5 SER E 2 ? GLU E 37 ? SER D 116 GLU D 151 1 ? 36 HELX_P HELX_P6 6 SER F 2 ? LEU F 36 ? SER F 116 LEU F 150 1 ? 35 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A SER 2 N ? ? A ACE 34 A SER 35 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale2 covale both ? B ACE 1 C ? ? ? 1_555 B SER 2 N ? ? C ACE 34 C SER 35 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale3 covale both ? C ACE 1 C ? ? ? 1_555 C SER 2 N ? ? E ACE 34 E SER 35 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale4 covale both ? D ACE 1 C ? ? ? 1_555 D SER 2 N ? ? B ACE 115 B SER 116 1_555 ? ? ? ? ? ? ? 1.360 ? ? covale5 covale both ? E ACE 1 C ? ? ? 1_555 E SER 2 N ? ? D ACE 115 D SER 116 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale6 covale both ? F ACE 1 C ? ? ? 1_555 F SER 2 N ? ? F ACE 115 F SER 116 1_555 ? ? ? ? ? ? ? 1.203 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 ACE A 1 ? SER A 2 ? ACE A 34 ? 1_555 SER A 35 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' 2 ACE B 1 ? SER B 2 ? ACE C 34 ? 1_555 SER C 35 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' 3 ACE C 1 ? SER C 2 ? ACE E 34 ? 1_555 SER E 35 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' 4 ACE D 1 ? SER D 2 ? ACE B 115 ? 1_555 SER B 116 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' 5 ACE E 1 ? SER E 2 ? ACE D 115 ? 1_555 SER D 116 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' 6 ACE F 1 ? SER F 2 ? ACE F 115 ? 1_555 SER F 116 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' # _pdbx_entry_details.entry_id 3VIE _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B ACE 115 ? ? HA B SER 116 ? ? 1.47 2 1 CH3 F ACE 115 ? ? N F SER 116 ? ? 1.67 3 1 O A HOH 12 ? ? O A HOH 13 ? ? 2.01 4 1 OE1 B GLU 123 ? ? O B HOH 53 ? ? 2.05 5 1 OE1 C GLN 56 ? ? O C HOH 91 ? ? 2.06 6 1 O C HOH 83 ? ? O C HOH 84 ? ? 2.15 7 1 O C HOH 72 ? ? O B HOH 78 ? ? 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C B ACE 115 ? ? N B SER 116 ? ? CA B SER 116 ? ? 86.77 121.70 -34.93 2.50 Y 2 1 O D ACE 115 ? ? C D ACE 115 ? ? N D SER 116 ? ? 138.58 122.70 15.88 1.60 Y # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id LEU _pdbx_unobs_or_zero_occ_residues.auth_seq_id 70 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id LEU _pdbx_unobs_or_zero_occ_residues.label_seq_id 37 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 GLN N N N N 81 GLN CA C N S 82 GLN C C N N 83 GLN O O N N 84 GLN CB C N N 85 GLN CG C N N 86 GLN CD C N N 87 GLN OE1 O N N 88 GLN NE2 N N N 89 GLN OXT O N N 90 GLN H H N N 91 GLN H2 H N N 92 GLN HA H N N 93 GLN HB2 H N N 94 GLN HB3 H N N 95 GLN HG2 H N N 96 GLN HG3 H N N 97 GLN HE21 H N N 98 GLN HE22 H N N 99 GLN HXT H N N 100 GLU N N N N 101 GLU CA C N S 102 GLU C C N N 103 GLU O O N N 104 GLU CB C N N 105 GLU CG C N N 106 GLU CD C N N 107 GLU OE1 O N N 108 GLU OE2 O N N 109 GLU OXT O N N 110 GLU H H N N 111 GLU H2 H N N 112 GLU HA H N N 113 GLU HB2 H N N 114 GLU HB3 H N N 115 GLU HG2 H N N 116 GLU HG3 H N N 117 GLU HE2 H N N 118 GLU HXT H N N 119 GLY N N N N 120 GLY CA C N N 121 GLY C C N N 122 GLY O O N N 123 GLY OXT O N N 124 GLY H H N N 125 GLY H2 H N N 126 GLY HA2 H N N 127 GLY HA3 H N N 128 GLY HXT H N N 129 HIS N N N N 130 HIS CA C N S 131 HIS C C N N 132 HIS O O N N 133 HIS CB C N N 134 HIS CG C Y N 135 HIS ND1 N Y N 136 HIS CD2 C Y N 137 HIS CE1 C Y N 138 HIS NE2 N Y N 139 HIS OXT O N N 140 HIS H H N N 141 HIS H2 H N N 142 HIS HA H N N 143 HIS HB2 H N N 144 HIS HB3 H N N 145 HIS HD1 H N N 146 HIS HD2 H N N 147 HIS HE1 H N N 148 HIS HE2 H N N 149 HIS HXT H N N 150 HOH O O N N 151 HOH H1 H N N 152 HOH H2 H N N 153 ILE N N N N 154 ILE CA C N S 155 ILE C C N N 156 ILE O O N N 157 ILE CB C N S 158 ILE CG1 C N N 159 ILE CG2 C N N 160 ILE CD1 C N N 161 ILE OXT O N N 162 ILE H H N N 163 ILE H2 H N N 164 ILE HA H N N 165 ILE HB H N N 166 ILE HG12 H N N 167 ILE HG13 H N N 168 ILE HG21 H N N 169 ILE HG22 H N N 170 ILE HG23 H N N 171 ILE HD11 H N N 172 ILE HD12 H N N 173 ILE HD13 H N N 174 ILE HXT H N N 175 LEU N N N N 176 LEU CA C N S 177 LEU C C N N 178 LEU O O N N 179 LEU CB C N N 180 LEU CG C N N 181 LEU CD1 C N N 182 LEU CD2 C N N 183 LEU OXT O N N 184 LEU H H N N 185 LEU H2 H N N 186 LEU HA H N N 187 LEU HB2 H N N 188 LEU HB3 H N N 189 LEU HG H N N 190 LEU HD11 H N N 191 LEU HD12 H N N 192 LEU HD13 H N N 193 LEU HD21 H N N 194 LEU HD22 H N N 195 LEU HD23 H N N 196 LEU HXT H N N 197 LYS N N N N 198 LYS CA C N S 199 LYS C C N N 200 LYS O O N N 201 LYS CB C N N 202 LYS CG C N N 203 LYS CD C N N 204 LYS CE C N N 205 LYS NZ N N N 206 LYS OXT O N N 207 LYS H H N N 208 LYS H2 H N N 209 LYS HA H N N 210 LYS HB2 H N N 211 LYS HB3 H N N 212 LYS HG2 H N N 213 LYS HG3 H N N 214 LYS HD2 H N N 215 LYS HD3 H N N 216 LYS HE2 H N N 217 LYS HE3 H N N 218 LYS HZ1 H N N 219 LYS HZ2 H N N 220 LYS HZ3 H N N 221 LYS HXT H N N 222 SER N N N N 223 SER CA C N S 224 SER C C N N 225 SER O O N N 226 SER CB C N N 227 SER OG O N N 228 SER OXT O N N 229 SER H H N N 230 SER H2 H N N 231 SER HA H N N 232 SER HB2 H N N 233 SER HB3 H N N 234 SER HG H N N 235 SER HXT H N N 236 THR N N N N 237 THR CA C N S 238 THR C C N N 239 THR O O N N 240 THR CB C N R 241 THR OG1 O N N 242 THR CG2 C N N 243 THR OXT O N N 244 THR H H N N 245 THR H2 H N N 246 THR HA H N N 247 THR HB H N N 248 THR HG1 H N N 249 THR HG21 H N N 250 THR HG22 H N N 251 THR HG23 H N N 252 THR HXT H N N 253 TRP N N N N 254 TRP CA C N S 255 TRP C C N N 256 TRP O O N N 257 TRP CB C N N 258 TRP CG C Y N 259 TRP CD1 C Y N 260 TRP CD2 C Y N 261 TRP NE1 N Y N 262 TRP CE2 C Y N 263 TRP CE3 C Y N 264 TRP CZ2 C Y N 265 TRP CZ3 C Y N 266 TRP CH2 C Y N 267 TRP OXT O N N 268 TRP H H N N 269 TRP H2 H N N 270 TRP HA H N N 271 TRP HB2 H N N 272 TRP HB3 H N N 273 TRP HD1 H N N 274 TRP HE1 H N N 275 TRP HE3 H N N 276 TRP HZ2 H N N 277 TRP HZ3 H N N 278 TRP HH2 H N N 279 TRP HXT H N N 280 TYR N N N N 281 TYR CA C N S 282 TYR C C N N 283 TYR O O N N 284 TYR CB C N N 285 TYR CG C Y N 286 TYR CD1 C Y N 287 TYR CD2 C Y N 288 TYR CE1 C Y N 289 TYR CE2 C Y N 290 TYR CZ C Y N 291 TYR OH O N N 292 TYR OXT O N N 293 TYR H H N N 294 TYR H2 H N N 295 TYR HA H N N 296 TYR HB2 H N N 297 TYR HB3 H N N 298 TYR HD1 H N N 299 TYR HD2 H N N 300 TYR HE1 H N N 301 TYR HE2 H N N 302 TYR HH H N N 303 TYR HXT H N N 304 VAL N N N N 305 VAL CA C N S 306 VAL C C N N 307 VAL O O N N 308 VAL CB C N N 309 VAL CG1 C N N 310 VAL CG2 C N N 311 VAL OXT O N N 312 VAL H H N N 313 VAL H2 H N N 314 VAL HA H N N 315 VAL HB H N N 316 VAL HG11 H N N 317 VAL HG12 H N N 318 VAL HG13 H N N 319 VAL HG21 H N N 320 VAL HG22 H N N 321 VAL HG23 H N N 322 VAL HXT H N N 323 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 GLN N CA sing N N 76 GLN N H sing N N 77 GLN N H2 sing N N 78 GLN CA C sing N N 79 GLN CA CB sing N N 80 GLN CA HA sing N N 81 GLN C O doub N N 82 GLN C OXT sing N N 83 GLN CB CG sing N N 84 GLN CB HB2 sing N N 85 GLN CB HB3 sing N N 86 GLN CG CD sing N N 87 GLN CG HG2 sing N N 88 GLN CG HG3 sing N N 89 GLN CD OE1 doub N N 90 GLN CD NE2 sing N N 91 GLN NE2 HE21 sing N N 92 GLN NE2 HE22 sing N N 93 GLN OXT HXT sing N N 94 GLU N CA sing N N 95 GLU N H sing N N 96 GLU N H2 sing N N 97 GLU CA C sing N N 98 GLU CA CB sing N N 99 GLU CA HA sing N N 100 GLU C O doub N N 101 GLU C OXT sing N N 102 GLU CB CG sing N N 103 GLU CB HB2 sing N N 104 GLU CB HB3 sing N N 105 GLU CG CD sing N N 106 GLU CG HG2 sing N N 107 GLU CG HG3 sing N N 108 GLU CD OE1 doub N N 109 GLU CD OE2 sing N N 110 GLU OE2 HE2 sing N N 111 GLU OXT HXT sing N N 112 GLY N CA sing N N 113 GLY N H sing N N 114 GLY N H2 sing N N 115 GLY CA C sing N N 116 GLY CA HA2 sing N N 117 GLY CA HA3 sing N N 118 GLY C O doub N N 119 GLY C OXT sing N N 120 GLY OXT HXT sing N N 121 HIS N CA sing N N 122 HIS N H sing N N 123 HIS N H2 sing N N 124 HIS CA C sing N N 125 HIS CA CB sing N N 126 HIS CA HA sing N N 127 HIS C O doub N N 128 HIS C OXT sing N N 129 HIS CB CG sing N N 130 HIS CB HB2 sing N N 131 HIS CB HB3 sing N N 132 HIS CG ND1 sing Y N 133 HIS CG CD2 doub Y N 134 HIS ND1 CE1 doub Y N 135 HIS ND1 HD1 sing N N 136 HIS CD2 NE2 sing Y N 137 HIS CD2 HD2 sing N N 138 HIS CE1 NE2 sing Y N 139 HIS CE1 HE1 sing N N 140 HIS NE2 HE2 sing N N 141 HIS OXT HXT sing N N 142 HOH O H1 sing N N 143 HOH O H2 sing N N 144 ILE N CA sing N N 145 ILE N H sing N N 146 ILE N H2 sing N N 147 ILE CA C sing N N 148 ILE CA CB sing N N 149 ILE CA HA sing N N 150 ILE C O doub N N 151 ILE C OXT sing N N 152 ILE CB CG1 sing N N 153 ILE CB CG2 sing N N 154 ILE CB HB sing N N 155 ILE CG1 CD1 sing N N 156 ILE CG1 HG12 sing N N 157 ILE CG1 HG13 sing N N 158 ILE CG2 HG21 sing N N 159 ILE CG2 HG22 sing N N 160 ILE CG2 HG23 sing N N 161 ILE CD1 HD11 sing N N 162 ILE CD1 HD12 sing N N 163 ILE CD1 HD13 sing N N 164 ILE OXT HXT sing N N 165 LEU N CA sing N N 166 LEU N H sing N N 167 LEU N H2 sing N N 168 LEU CA C sing N N 169 LEU CA CB sing N N 170 LEU CA HA sing N N 171 LEU C O doub N N 172 LEU C OXT sing N N 173 LEU CB CG sing N N 174 LEU CB HB2 sing N N 175 LEU CB HB3 sing N N 176 LEU CG CD1 sing N N 177 LEU CG CD2 sing N N 178 LEU CG HG sing N N 179 LEU CD1 HD11 sing N N 180 LEU CD1 HD12 sing N N 181 LEU CD1 HD13 sing N N 182 LEU CD2 HD21 sing N N 183 LEU CD2 HD22 sing N N 184 LEU CD2 HD23 sing N N 185 LEU OXT HXT sing N N 186 LYS N CA sing N N 187 LYS N H sing N N 188 LYS N H2 sing N N 189 LYS CA C sing N N 190 LYS CA CB sing N N 191 LYS CA HA sing N N 192 LYS C O doub N N 193 LYS C OXT sing N N 194 LYS CB CG sing N N 195 LYS CB HB2 sing N N 196 LYS CB HB3 sing N N 197 LYS CG CD sing N N 198 LYS CG HG2 sing N N 199 LYS CG HG3 sing N N 200 LYS CD CE sing N N 201 LYS CD HD2 sing N N 202 LYS CD HD3 sing N N 203 LYS CE NZ sing N N 204 LYS CE HE2 sing N N 205 LYS CE HE3 sing N N 206 LYS NZ HZ1 sing N N 207 LYS NZ HZ2 sing N N 208 LYS NZ HZ3 sing N N 209 LYS OXT HXT sing N N 210 SER N CA sing N N 211 SER N H sing N N 212 SER N H2 sing N N 213 SER CA C sing N N 214 SER CA CB sing N N 215 SER CA HA sing N N 216 SER C O doub N N 217 SER C OXT sing N N 218 SER CB OG sing N N 219 SER CB HB2 sing N N 220 SER CB HB3 sing N N 221 SER OG HG sing N N 222 SER OXT HXT sing N N 223 THR N CA sing N N 224 THR N H sing N N 225 THR N H2 sing N N 226 THR CA C sing N N 227 THR CA CB sing N N 228 THR CA HA sing N N 229 THR C O doub N N 230 THR C OXT sing N N 231 THR CB OG1 sing N N 232 THR CB CG2 sing N N 233 THR CB HB sing N N 234 THR OG1 HG1 sing N N 235 THR CG2 HG21 sing N N 236 THR CG2 HG22 sing N N 237 THR CG2 HG23 sing N N 238 THR OXT HXT sing N N 239 TRP N CA sing N N 240 TRP N H sing N N 241 TRP N H2 sing N N 242 TRP CA C sing N N 243 TRP CA CB sing N N 244 TRP CA HA sing N N 245 TRP C O doub N N 246 TRP C OXT sing N N 247 TRP CB CG sing N N 248 TRP CB HB2 sing N N 249 TRP CB HB3 sing N N 250 TRP CG CD1 doub Y N 251 TRP CG CD2 sing Y N 252 TRP CD1 NE1 sing Y N 253 TRP CD1 HD1 sing N N 254 TRP CD2 CE2 doub Y N 255 TRP CD2 CE3 sing Y N 256 TRP NE1 CE2 sing Y N 257 TRP NE1 HE1 sing N N 258 TRP CE2 CZ2 sing Y N 259 TRP CE3 CZ3 doub Y N 260 TRP CE3 HE3 sing N N 261 TRP CZ2 CH2 doub Y N 262 TRP CZ2 HZ2 sing N N 263 TRP CZ3 CH2 sing Y N 264 TRP CZ3 HZ3 sing N N 265 TRP CH2 HH2 sing N N 266 TRP OXT HXT sing N N 267 TYR N CA sing N N 268 TYR N H sing N N 269 TYR N H2 sing N N 270 TYR CA C sing N N 271 TYR CA CB sing N N 272 TYR CA HA sing N N 273 TYR C O doub N N 274 TYR C OXT sing N N 275 TYR CB CG sing N N 276 TYR CB HB2 sing N N 277 TYR CB HB3 sing N N 278 TYR CG CD1 doub Y N 279 TYR CG CD2 sing Y N 280 TYR CD1 CE1 sing Y N 281 TYR CD1 HD1 sing N N 282 TYR CD2 CE2 doub Y N 283 TYR CD2 HD2 sing N N 284 TYR CE1 CZ doub Y N 285 TYR CE1 HE1 sing N N 286 TYR CE2 CZ sing Y N 287 TYR CE2 HE2 sing N N 288 TYR CZ OH sing N N 289 TYR OH HH sing N N 290 TYR OXT HXT sing N N 291 VAL N CA sing N N 292 VAL N H sing N N 293 VAL N H2 sing N N 294 VAL CA C sing N N 295 VAL CA CB sing N N 296 VAL CA HA sing N N 297 VAL C O doub N N 298 VAL C OXT sing N N 299 VAL CB CG1 sing N N 300 VAL CB CG2 sing N N 301 VAL CB HB sing N N 302 VAL CG1 HG11 sing N N 303 VAL CG1 HG12 sing N N 304 VAL CG1 HG13 sing N N 305 VAL CG2 HG21 sing N N 306 VAL CG2 HG22 sing N N 307 VAL CG2 HG23 sing N N 308 VAL OXT HXT sing N N 309 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1ENV _pdbx_initial_refinement_model.details 'PDB ENTRY 1ENV' # _atom_sites.entry_id 3VIE _atom_sites.fract_transf_matrix[1][1] 0.011263 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000128 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020334 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017917 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_