HEADER HYDROLASE/TRANSPORT PROTEIN 30-NOV-11 3VLC TITLE CRYSTAL STRUCTURE OF S. CEREVISIAE GET3 IN THE SEMI OPEN CONFORMATION TITLE 2 IN COMPLEX WITH GET1 CYTOSOLIC DOMAIN AT 4.5 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATPASE GET3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ARSENICAL PUMP-DRIVING ATPASE, ARSENITE-STIMULATED ATPASE, COMPND 5 GOLGI TO ER TRAFFIC PROTEIN 3, GUIDED ENTRY OF TAIL-ANCHORED PROTEINS COMPND 6 3; COMPND 7 EC: 3.6.-.-; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: GOLGI TO ER TRAFFIC PROTEIN 1; COMPND 11 CHAIN: E; COMPND 12 FRAGMENT: UNP RESIDUES 21-104; COMPND 13 SYNONYM: GUIDED ENTRY OF TAIL-ANCHORED PROTEINS 1, MITOCHONDRIAL COMPND 14 DISTRIBUTION AND MORPHOLOGY PROTEIN 39; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 STRAIN: NRRL Y-53; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETDUET-1; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 13 ORGANISM_COMMON: YEAST; SOURCE 14 ORGANISM_TAXID: 559292; SOURCE 15 STRAIN: ATCC 204508 / S288C; SOURCE 16 GENE: GET1, MDM39, YGL020C; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 19 EXPRESSION_SYSTEM_STRAIN: ROSETTA (DE3); SOURCE 20 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 21 EXPRESSION_SYSTEM_PLASMID: PETDUET-1 KEYWDS ATPASE, MEMBRANE PROTEIN INSERTION, ATP BINDING, MEMBRANE PROTEIN KEYWDS 2 BINDING, HYDROLASE-TRANSPORT PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.KUBOTA,A.YAMAGATA,S.FUKAI REVDAT 3 08-NOV-23 3VLC 1 REMARK SEQADV REVDAT 2 19-JUN-13 3VLC 1 JRNL REVDAT 1 20-JUN-12 3VLC 0 JRNL AUTH K.KUBOTA,A.YAMAGATA,Y.SATO,S.GOTO-ITO,S.FUKAI JRNL TITL GET1 STABILIZES AN OPEN DIMER CONFORMATION OF GET3 ATPASE BY JRNL TITL 2 BINDING TWO DISTINCT INTERFACES JRNL REF J.MOL.BIOL. V. 422 366 2012 JRNL REFN ISSN 0022-2836 JRNL PMID 22684149 JRNL DOI 10.1016/J.JMB.2012.05.045 REMARK 2 REMARK 2 RESOLUTION. 4.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 3843 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.346 REMARK 3 FREE R VALUE : 0.366 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 201 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2923 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 220.9 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 23.16400 REMARK 3 B22 (A**2) : 23.16400 REMARK 3 B33 (A**2) : -46.32800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.396 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.193 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.214 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.038 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 1.920 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 113.8 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 6 : ADP.PARAM REMARK 3 PARAMETER FILE 7 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 TOPOLOGY FILE 7 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3VLC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000095188. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 3862 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 12.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05000 REMARK 200 FOR THE DATA SET : 45.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.31300 REMARK 200 FOR SHELL : 4.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3B2E REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13.5% PEG 3350, 0.18M TRISODIUM REMARK 280 CITRATE, 9% MPD, 0.1M TRIS-HCL, PH 8.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 66.31700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 38.28814 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 61.71767 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 66.31700 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 38.28814 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 61.71767 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 66.31700 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 38.28814 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 61.71767 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 66.31700 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 38.28814 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 61.71767 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 66.31700 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 38.28814 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 61.71767 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 66.31700 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 38.28814 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 61.71767 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 76.57628 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 123.43533 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 76.57628 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 123.43533 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 76.57628 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 123.43533 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 76.57628 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 123.43533 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 76.57628 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 123.43533 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 76.57628 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 123.43533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 66.31700 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 38.28814 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 61.71767 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 MET A 100 REMARK 465 ALA A 101 REMARK 465 VAL A 102 REMARK 465 SER A 103 REMARK 465 ARG A 104 REMARK 465 ALA A 105 REMARK 465 ASN A 106 REMARK 465 ASN A 107 REMARK 465 ASN A 108 REMARK 465 GLY A 109 REMARK 465 SER A 110 REMARK 465 ASP A 111 REMARK 465 GLY A 112 REMARK 465 GLN A 113 REMARK 465 GLY A 114 REMARK 465 ASP A 115 REMARK 465 ASP A 116 REMARK 465 LEU A 117 REMARK 465 GLY A 118 REMARK 465 SER A 119 REMARK 465 LEU A 120 REMARK 465 LEU A 121 REMARK 465 GLN A 122 REMARK 465 GLY A 123 REMARK 465 GLY A 124 REMARK 465 ALA A 125 REMARK 465 GLU A 192 REMARK 465 ILE A 193 REMARK 465 THR A 194 REMARK 465 ASN A 195 REMARK 465 LYS A 196 REMARK 465 LEU A 197 REMARK 465 GLY A 198 REMARK 465 PRO A 199 REMARK 465 MET A 200 REMARK 465 LEU A 201 REMARK 465 ASN A 202 REMARK 465 SER A 203 REMARK 465 PHE A 204 REMARK 465 MET A 205 REMARK 465 GLY A 206 REMARK 465 ALA A 207 REMARK 465 ASN A 284 REMARK 465 CYS A 285 REMARK 465 LYS A 286 REMARK 465 ARG A 287 REMARK 465 CYS A 288 REMARK 465 ASP A 352 REMARK 465 LYS A 353 REMARK 465 GLU A 354 REMARK 465 MET E 11 REMARK 465 GLY E 12 REMARK 465 SER E 13 REMARK 465 SER E 14 REMARK 465 HIS E 15 REMARK 465 HIS E 16 REMARK 465 HIS E 17 REMARK 465 HIS E 18 REMARK 465 HIS E 19 REMARK 465 HIS E 20 REMARK 465 THR E 21 REMARK 465 ASN E 22 REMARK 465 LYS E 23 REMARK 465 TYR E 24 REMARK 465 HIS E 25 REMARK 465 GLU E 26 REMARK 465 LYS E 27 REMARK 465 TRP E 28 REMARK 465 ILE E 29 REMARK 465 SER E 30 REMARK 465 LYS E 31 REMARK 465 PHE E 32 REMARK 465 ALA E 33 REMARK 465 PRO E 34 REMARK 465 GLY E 35 REMARK 465 HIS E 101 REMARK 465 LYS E 102 REMARK 465 LEU E 103 REMARK 465 ARG E 104 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 190 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 60 75.73 46.03 REMARK 500 ALA A 74 95.40 -51.52 REMARK 500 MET A 97 35.48 -86.19 REMARK 500 ASN A 98 35.07 -153.67 REMARK 500 ALA A 127 5.90 -59.96 REMARK 500 THR A 167 135.17 -35.15 REMARK 500 HIS A 172 40.29 -84.54 REMARK 500 THR A 173 -57.58 -1.07 REMARK 500 LEU A 174 74.11 -111.70 REMARK 500 PHE A 176 -18.65 -47.95 REMARK 500 PRO A 180 -70.29 -55.11 REMARK 500 LEU A 186 36.23 -150.62 REMARK 500 LEU A 187 -51.04 -129.18 REMARK 500 SER A 213 6.49 -67.42 REMARK 500 LYS A 220 11.76 -57.20 REMARK 500 PRO A 233 -8.94 -44.83 REMARK 500 SER A 244 49.09 -84.83 REMARK 500 PHE A 246 -74.22 -47.33 REMARK 500 GLU A 282 146.12 -178.99 REMARK 500 GLU A 320 156.06 -39.98 REMARK 500 ASN A 335 -78.34 -86.08 REMARK 500 ILE A 341 -80.85 -68.41 REMARK 500 SER E 39 -66.49 -128.76 REMARK 500 TYR E 42 -8.52 -51.48 REMARK 500 LEU E 43 -60.42 -106.79 REMARK 500 ASN E 57 38.49 -89.33 REMARK 500 SER E 58 14.69 -142.55 REMARK 500 ALA E 66 -71.82 -48.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 401 REMARK 999 REMARK 999 SEQUENCE REMARK 999 A SEQUENCE DATABASE REFERENCE FOR ENTITY 1 (CHAIN A) WHICH DERIVES REMARK 999 FROM STRAIN NRRL Y-53 DOES NOT CURRENTLY EXIST. DBREF 3VLC A 1 354 PDB 3VLC 3VLC 1 354 DBREF 3VLC E 21 104 UNP P53192 GET1_YEAST 21 104 SEQADV 3VLC MET E 11 UNP P53192 EXPRESSION TAG SEQADV 3VLC GLY E 12 UNP P53192 EXPRESSION TAG SEQADV 3VLC SER E 13 UNP P53192 EXPRESSION TAG SEQADV 3VLC SER E 14 UNP P53192 EXPRESSION TAG SEQADV 3VLC HIS E 15 UNP P53192 EXPRESSION TAG SEQADV 3VLC HIS E 16 UNP P53192 EXPRESSION TAG SEQADV 3VLC HIS E 17 UNP P53192 EXPRESSION TAG SEQADV 3VLC HIS E 18 UNP P53192 EXPRESSION TAG SEQADV 3VLC HIS E 19 UNP P53192 EXPRESSION TAG SEQADV 3VLC HIS E 20 UNP P53192 EXPRESSION TAG SEQRES 1 A 354 MET ASP LEU THR VAL GLU PRO ASN LEU HIS SER LEU ILE SEQRES 2 A 354 THR SER THR THR HIS LYS TRP ILE PHE VAL GLY GLY LYS SEQRES 3 A 354 GLY GLY VAL GLY LYS THR THR SER SER CYS SER ILE ALA SEQRES 4 A 354 ILE GLN MET ALA LEU SER GLN PRO ASN LYS GLN PHE LEU SEQRES 5 A 354 LEU ILE SER THR ASP PRO ALA HIS ASN LEU SER ASP ALA SEQRES 6 A 354 PHE GLY GLU LYS PHE GLY LYS ASP ALA ARG LYS VAL THR SEQRES 7 A 354 GLY MET ASN ASN LEU SER CYS MET GLU ILE ASP PRO SER SEQRES 8 A 354 ALA ALA LEU LYS ASP MET ASN ASP MET ALA VAL SER ARG SEQRES 9 A 354 ALA ASN ASN ASN GLY SER ASP GLY GLN GLY ASP ASP LEU SEQRES 10 A 354 GLY SER LEU LEU GLN GLY GLY ALA LEU ALA ASP LEU THR SEQRES 11 A 354 GLY SER ILE PRO GLY ILE ASP GLU ALA LEU SER PHE MET SEQRES 12 A 354 GLU VAL MET LYS HIS ILE LYS ARG GLN GLU GLN ASP GLU SEQRES 13 A 354 GLY GLU THR PHE ASP THR VAL ILE PHE ASP THR ALA PRO SEQRES 14 A 354 THR GLY HIS THR LEU ARG PHE LEU GLN LEU PRO ASN THR SEQRES 15 A 354 LEU SER LYS LEU LEU GLU LYS PHE GLY GLU ILE THR ASN SEQRES 16 A 354 LYS LEU GLY PRO MET LEU ASN SER PHE MET GLY ALA GLY SEQRES 17 A 354 ASN VAL ASP ILE SER GLY LYS LEU ASN GLU LEU LYS ALA SEQRES 18 A 354 ASN VAL GLU THR ILE ARG GLN GLN PHE THR ASP PRO ASP SEQRES 19 A 354 LEU THR THR PHE VAL CYS VAL CYS ILE SER GLU PHE LEU SEQRES 20 A 354 SER LEU TYR GLU THR GLU ARG LEU ILE GLN GLU LEU ILE SEQRES 21 A 354 SER TYR ASP MET ASP VAL ASN SER ILE ILE VAL ASN GLN SEQRES 22 A 354 LEU LEU PHE ALA GLU ASN ASP GLN GLU HIS ASN CYS LYS SEQRES 23 A 354 ARG CYS GLN ALA ARG TRP LYS MET GLN LYS LYS TYR LEU SEQRES 24 A 354 ASP GLN ILE ASP GLU LEU TYR GLU ASP PHE HIS VAL VAL SEQRES 25 A 354 LYS MET PRO LEU CYS ALA GLY GLU ILE ARG GLY LEU ASN SEQRES 26 A 354 ASN LEU THR LYS PHE SER GLN PHE LEU ASN LYS GLU TYR SEQRES 27 A 354 ASN PRO ILE THR ASP GLY LYS VAL ILE TYR GLU LEU GLU SEQRES 28 A 354 ASP LYS GLU SEQRES 1 E 94 MET GLY SER SER HIS HIS HIS HIS HIS HIS THR ASN LYS SEQRES 2 E 94 TYR HIS GLU LYS TRP ILE SER LYS PHE ALA PRO GLY ASN SEQRES 3 E 94 GLU LEU SER LYS LYS TYR LEU ALA LYS VAL LYS GLU ARG SEQRES 4 E 94 HIS GLU LEU LYS GLU PHE ASN ASN SER ILE SER ALA GLN SEQRES 5 E 94 ASP ASN TYR ALA LYS TRP THR LYS ASN ASN ARG LYS LEU SEQRES 6 E 94 ASP SER LEU ASP LYS GLU ILE ASN ASN LEU LYS ASP GLU SEQRES 7 E 94 ILE GLN SER GLU ASN LYS ALA PHE GLN ALA HIS LEU HIS SEQRES 8 E 94 LYS LEU ARG HET ADP A 401 27 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 3 ADP C10 H15 N5 O10 P2 HELIX 1 1 LEU A 9 SER A 15 1 7 HELIX 2 2 GLY A 30 SER A 45 1 16 HELIX 3 3 HIS A 60 GLY A 67 1 8 HELIX 4 4 ASP A 89 LEU A 94 1 6 HELIX 5 5 ALA A 127 ILE A 133 1 7 HELIX 6 6 GLY A 135 GLU A 156 1 22 HELIX 7 7 ARG A 175 LEU A 177 5 3 HELIX 8 8 GLN A 178 LYS A 185 1 8 HELIX 9 9 GLU A 218 THR A 231 1 14 HELIX 10 10 GLU A 245 ASP A 263 1 19 HELIX 11 11 PHE A 276 ASP A 280 5 5 HELIX 12 12 ALA A 290 TYR A 306 1 17 HELIX 13 13 ARG A 322 GLN A 332 1 11 HELIX 14 14 PHE A 333 ASN A 335 5 3 HELIX 15 15 ILE A 341 GLU A 349 5 9 HELIX 16 16 SER E 39 ASN E 57 1 19 HELIX 17 17 ASN E 64 ILE E 82 1 19 HELIX 18 18 ASN E 84 ILE E 89 1 6 HELIX 19 19 GLU E 92 GLN E 97 1 6 SHEET 1 A 8 ARG A 75 LYS A 76 0 SHEET 2 A 8 LEU A 83 GLU A 87 -1 O CYS A 85 N ARG A 75 SHEET 3 A 8 PHE A 51 SER A 55 1 N LEU A 53 O SER A 84 SHEET 4 A 8 THR A 162 ASP A 166 1 O ILE A 164 N LEU A 52 SHEET 5 A 8 TRP A 20 GLY A 24 1 N VAL A 23 O PHE A 165 SHEET 6 A 8 THR A 236 ILE A 243 1 O THR A 237 N PHE A 22 SHEET 7 A 8 VAL A 266 LEU A 274 1 O ILE A 270 N CYS A 240 SHEET 8 A 8 HIS A 310 PRO A 315 1 O VAL A 312 N VAL A 271 SITE 1 AC1 17 GLY A 27 GLY A 28 VAL A 29 GLY A 30 SITE 2 AC1 17 LYS A 31 THR A 32 THR A 33 LEU A 247 SITE 3 AC1 17 ASN A 272 PRO A 315 LEU A 316 CYS A 317 SITE 4 AC1 17 GLU A 320 ILE A 321 ARG A 322 PHE A 330 SITE 5 AC1 17 GLN E 62 CRYST1 132.634 132.634 185.153 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007540 0.004353 0.000000 0.00000 SCALE2 0.000000 0.008706 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005401 0.00000