HEADER IMMUNE SYSTEM 07-MAR-12 3VPP TITLE CRYSTAL STRUCTURE OF THE HUMAN CLEC9A C-TYPE LECTIN-LIKE DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: C-TYPE LECTIN DOMAIN FAMILY 9 MEMBER A; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: C-TYPE LECTIN-LIKE DOMAIN, UNP RESIDUES 110-241; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CLEC9A, UNQ9341/PRO34046; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK293F KEYWDS DENDRITIC CELL, C-TYPE LECTIN-LIKE DOMAIN, MEMBRANE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR P.E.CZABOTAR,J.G.ZHANG,A.N.POLICHENI,K.SHORTMAN,M.H.LAHOUD,P.M.COLMAN REVDAT 5 08-NOV-23 3VPP 1 REMARK REVDAT 4 28-APR-21 3VPP 1 SOURCE REMARK SEQADV LINK REVDAT 3 16-APR-14 3VPP 1 REMARK REVDAT 2 31-JUL-13 3VPP 1 JRNL REVDAT 1 25-APR-12 3VPP 0 JRNL AUTH J.G.ZHANG,P.E.CZABOTAR,A.N.POLICHENI,I.CAMINSCHI,S.S.WAN, JRNL AUTH 2 S.KITSOULIS,K.M.TULLETT,A.Y.ROBIN,R.BRAMMANANTH, JRNL AUTH 3 M.F.VAN DELFT,J.LU,L.A.O'REILLY,E.C.JOSEFSSON,B.T.KILE, JRNL AUTH 4 W.J.CHIN,J.D.MINTERN,M.A.OLSHINA,W.WONG,J.BAUM,M.D.WRIGHT, JRNL AUTH 5 D.C.HUANG,N.MOHANDAS,R.L.COPPEL,P.M.COLMAN,N.A.NICOLA, JRNL AUTH 6 K.SHORTMAN,M.H.LAHOUD JRNL TITL THE DENDRITIC CELL RECEPTOR CLEC9A BINDS DAMAGED CELLS VIA JRNL TITL 2 EXPOSED ACTIN FILAMENTS. JRNL REF IMMUNITY V. 36 646 2012 JRNL REFN ISSN 1074-7613 JRNL PMID 22483802 JRNL DOI 10.1016/J.IMMUNI.2012.03.009 REMARK 2 REMARK 2 RESOLUTION. 1.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.240 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 56633 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2843 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.8952 - 4.4421 1.00 2752 146 0.2040 0.2127 REMARK 3 2 4.4421 - 3.5323 1.00 2749 148 0.1502 0.1987 REMARK 3 3 3.5323 - 3.0877 0.99 2745 146 0.1655 0.2019 REMARK 3 4 3.0877 - 2.8062 0.99 2706 145 0.1831 0.1924 REMARK 3 5 2.8062 - 2.6055 0.99 2760 147 0.1884 0.2382 REMARK 3 6 2.6055 - 2.4522 0.99 2721 142 0.1824 0.2265 REMARK 3 7 2.4522 - 2.3296 0.98 2733 147 0.1819 0.2129 REMARK 3 8 2.3296 - 2.2283 0.98 2690 141 0.1763 0.2164 REMARK 3 9 2.2283 - 2.1426 0.98 2715 139 0.1746 0.2498 REMARK 3 10 2.1426 - 2.0688 0.98 2727 143 0.1935 0.2338 REMARK 3 11 2.0688 - 2.0042 0.97 2670 141 0.1870 0.2490 REMARK 3 12 2.0042 - 1.9469 0.97 2711 144 0.1744 0.2233 REMARK 3 13 1.9469 - 1.8957 0.97 2661 141 0.1878 0.2497 REMARK 3 14 1.8957 - 1.8495 0.98 2685 143 0.1950 0.2318 REMARK 3 15 1.8495 - 1.8075 0.97 2677 140 0.2070 0.2530 REMARK 3 16 1.8075 - 1.7690 0.97 2683 140 0.2179 0.2525 REMARK 3 17 1.7690 - 1.7337 0.97 2628 140 0.2428 0.2665 REMARK 3 18 1.7337 - 1.7010 0.96 2695 140 0.2774 0.3410 REMARK 3 19 1.7010 - 1.6706 0.96 2636 141 0.3025 0.3348 REMARK 3 20 1.6706 - 1.6423 0.88 2446 129 0.3144 0.3264 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.60 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 51.24 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.61890 REMARK 3 B22 (A**2) : -0.61710 REMARK 3 B33 (A**2) : -5.00170 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -5.63790 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2046 REMARK 3 ANGLE : 1.122 2775 REMARK 3 CHIRALITY : 0.074 283 REMARK 3 PLANARITY : 0.006 350 REMARK 3 DIHEDRAL : 13.523 735 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 111:133) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1126 6.4084 6.4593 REMARK 3 T TENSOR REMARK 3 T11: 0.1723 T22: 0.1990 REMARK 3 T33: 0.1065 T12: -0.0666 REMARK 3 T13: 0.0301 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 3.0010 L22: 2.0604 REMARK 3 L33: 1.2831 L12: 0.9610 REMARK 3 L13: 0.7307 L23: 0.3806 REMARK 3 S TENSOR REMARK 3 S11: 0.0178 S12: -0.0958 S13: -0.1479 REMARK 3 S21: 0.1088 S22: 0.0043 S23: 0.2238 REMARK 3 S31: 0.2835 S32: -0.4143 S33: -0.0159 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 134:153) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3897 3.6494 3.4783 REMARK 3 T TENSOR REMARK 3 T11: 0.1670 T22: 0.0762 REMARK 3 T33: 0.1288 T12: 0.0208 REMARK 3 T13: -0.0239 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 2.3618 L22: 1.8008 REMARK 3 L33: 2.3322 L12: 0.5556 REMARK 3 L13: 0.9609 L23: 0.0241 REMARK 3 S TENSOR REMARK 3 S11: 0.1686 S12: 0.0106 S13: -0.2424 REMARK 3 S21: 0.2394 S22: 0.0546 S23: -0.1090 REMARK 3 S31: 0.4140 S32: 0.0707 S33: -0.1821 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 154:166) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5097 12.1992 -4.3643 REMARK 3 T TENSOR REMARK 3 T11: 0.1068 T22: 0.1664 REMARK 3 T33: 0.2106 T12: 0.0062 REMARK 3 T13: -0.0015 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 2.9671 L22: 2.5325 REMARK 3 L33: 6.3656 L12: -0.3854 REMARK 3 L13: -0.3539 L23: 1.4736 REMARK 3 S TENSOR REMARK 3 S11: -0.0193 S12: -0.2331 S13: 0.5168 REMARK 3 S21: 0.0423 S22: 0.0173 S23: -0.0099 REMARK 3 S31: -0.2500 S32: -0.2735 S33: 0.0761 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 167:179) REMARK 3 ORIGIN FOR THE GROUP (A): -2.0007 14.8753 -0.1310 REMARK 3 T TENSOR REMARK 3 T11: 0.0829 T22: 0.0525 REMARK 3 T33: 0.0707 T12: 0.0052 REMARK 3 T13: -0.0092 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 2.6717 L22: 3.8054 REMARK 3 L33: 2.0490 L12: -0.9744 REMARK 3 L13: 0.2394 L23: 0.6452 REMARK 3 S TENSOR REMARK 3 S11: 0.0394 S12: -0.0384 S13: 0.1336 REMARK 3 S21: -0.0384 S22: -0.1275 S23: 0.0445 REMARK 3 S31: -0.2250 S32: -0.0989 S33: 0.0021 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 180:188) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5646 4.5071 -11.3019 REMARK 3 T TENSOR REMARK 3 T11: 0.1010 T22: 0.2749 REMARK 3 T33: 0.2187 T12: 0.0199 REMARK 3 T13: 0.0537 T23: -0.0561 REMARK 3 L TENSOR REMARK 3 L11: 1.4642 L22: 0.1005 REMARK 3 L33: 0.2388 L12: 0.3019 REMARK 3 L13: -0.5610 L23: -0.0849 REMARK 3 S TENSOR REMARK 3 S11: 0.1938 S12: 0.4644 S13: -0.0195 REMARK 3 S21: -0.1176 S22: 0.1685 S23: -0.5007 REMARK 3 S31: 0.1036 S32: 0.5148 S33: -0.0747 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 189:209) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0916 6.2644 -10.5168 REMARK 3 T TENSOR REMARK 3 T11: 0.0927 T22: 0.0794 REMARK 3 T33: 0.0972 T12: 0.0075 REMARK 3 T13: -0.0208 T23: -0.0038 REMARK 3 L TENSOR REMARK 3 L11: 2.3377 L22: 2.4702 REMARK 3 L33: 3.0710 L12: -0.6940 REMARK 3 L13: 1.6323 L23: -0.0066 REMARK 3 S TENSOR REMARK 3 S11: -0.0408 S12: 0.1859 S13: 0.1091 REMARK 3 S21: 0.2034 S22: 0.0138 S23: -0.4220 REMARK 3 S31: -0.0396 S32: 0.1857 S33: -0.0488 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 210:237) REMARK 3 ORIGIN FOR THE GROUP (A): -0.7317 11.3970 -0.2205 REMARK 3 T TENSOR REMARK 3 T11: 0.1031 T22: 0.0932 REMARK 3 T33: 0.0831 T12: -0.0069 REMARK 3 T13: -0.0008 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 1.0140 L22: 1.5197 REMARK 3 L33: 1.8076 L12: -0.0058 REMARK 3 L13: -0.0429 L23: 0.2413 REMARK 3 S TENSOR REMARK 3 S11: 0.0529 S12: 0.0121 S13: 0.0032 REMARK 3 S21: -0.0377 S22: 0.0267 S23: -0.0430 REMARK 3 S31: 0.0994 S32: 0.0743 S33: -0.0463 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 111:133) REMARK 3 ORIGIN FOR THE GROUP (A): -23.2739 -6.3141 -24.3192 REMARK 3 T TENSOR REMARK 3 T11: 0.0978 T22: 0.2436 REMARK 3 T33: 0.1520 T12: 0.1109 REMARK 3 T13: -0.0341 T23: -0.0660 REMARK 3 L TENSOR REMARK 3 L11: 1.6785 L22: 0.8337 REMARK 3 L33: 2.9218 L12: -0.1042 REMARK 3 L13: -0.2976 L23: 0.7942 REMARK 3 S TENSOR REMARK 3 S11: -0.0891 S12: -0.1355 S13: 0.1874 REMARK 3 S21: -0.2080 S22: -0.1358 S23: 0.1804 REMARK 3 S31: -0.5881 S32: -0.8238 S33: 0.1128 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 134:144) REMARK 3 ORIGIN FOR THE GROUP (A): -14.8371 -3.8875 -34.1382 REMARK 3 T TENSOR REMARK 3 T11: 0.2632 T22: 0.1166 REMARK 3 T33: 0.1217 T12: -0.0013 REMARK 3 T13: -0.0308 T23: 0.0193 REMARK 3 L TENSOR REMARK 3 L11: 3.3287 L22: 5.0872 REMARK 3 L33: 2.4691 L12: -2.9366 REMARK 3 L13: 0.4637 L23: 0.4537 REMARK 3 S TENSOR REMARK 3 S11: -0.1318 S12: 0.2402 S13: 0.3140 REMARK 3 S21: -0.8237 S22: 0.0757 S23: 0.0407 REMARK 3 S31: -0.6612 S32: -0.0751 S33: -0.0012 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 145:153) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5460 -2.8623 -22.0514 REMARK 3 T TENSOR REMARK 3 T11: 0.0970 T22: 0.1035 REMARK 3 T33: 0.1305 T12: 0.0094 REMARK 3 T13: 0.0023 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.5958 L22: 0.6676 REMARK 3 L33: 5.1950 L12: 0.0631 REMARK 3 L13: 1.3220 L23: -1.0842 REMARK 3 S TENSOR REMARK 3 S11: -0.1974 S12: 0.0121 S13: 0.2336 REMARK 3 S21: 0.1650 S22: -0.1380 S23: 0.0267 REMARK 3 S31: -0.6695 S32: 0.2517 S33: 0.0756 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 154:166) REMARK 3 ORIGIN FOR THE GROUP (A): -17.7536 -11.9101 -14.2352 REMARK 3 T TENSOR REMARK 3 T11: 0.1359 T22: 0.1726 REMARK 3 T33: 0.1171 T12: -0.0226 REMARK 3 T13: 0.0503 T23: 0.0160 REMARK 3 L TENSOR REMARK 3 L11: 5.5965 L22: 3.4498 REMARK 3 L33: 4.3126 L12: 1.7982 REMARK 3 L13: 2.7017 L23: 1.1163 REMARK 3 S TENSOR REMARK 3 S11: -0.0676 S12: -0.1428 S13: -0.3423 REMARK 3 S21: 0.1134 S22: 0.0158 S23: -0.0364 REMARK 3 S31: 0.2663 S32: -0.6608 S33: 0.1380 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 167:176) REMARK 3 ORIGIN FOR THE GROUP (A): -15.8479 -16.8414 -25.4358 REMARK 3 T TENSOR REMARK 3 T11: 0.0984 T22: 0.0966 REMARK 3 T33: 0.1090 T12: -0.0329 REMARK 3 T13: -0.0017 T23: -0.0008 REMARK 3 L TENSOR REMARK 3 L11: 3.0234 L22: 4.8849 REMARK 3 L33: 2.7678 L12: 1.4149 REMARK 3 L13: -0.4984 L23: -0.4483 REMARK 3 S TENSOR REMARK 3 S11: 0.0746 S12: -0.1771 S13: -0.3460 REMARK 3 S21: 0.1267 S22: -0.1029 S23: -0.0483 REMARK 3 S31: 0.3312 S32: -0.3667 S33: -0.0323 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 177:184) REMARK 3 ORIGIN FOR THE GROUP (A): 2.4656 -4.2774 -27.3636 REMARK 3 T TENSOR REMARK 3 T11: 0.1264 T22: 0.3793 REMARK 3 T33: 0.3557 T12: -0.0991 REMARK 3 T13: 0.0680 T23: 0.0338 REMARK 3 L TENSOR REMARK 3 L11: 0.5264 L22: 0.1014 REMARK 3 L33: 0.3608 L12: -0.1653 REMARK 3 L13: -0.4333 L23: 0.1096 REMARK 3 S TENSOR REMARK 3 S11: -0.0656 S12: 0.2083 S13: 0.2408 REMARK 3 S21: -0.2471 S22: -0.0275 S23: -1.0358 REMARK 3 S31: -0.3882 S32: 1.1251 S33: 0.0748 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 185:193) REMARK 3 ORIGIN FOR THE GROUP (A): -3.5478 -1.7029 -23.0056 REMARK 3 T TENSOR REMARK 3 T11: 0.0753 T22: 0.0816 REMARK 3 T33: 0.1334 T12: -0.0153 REMARK 3 T13: 0.0032 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.1178 L22: 5.1695 REMARK 3 L33: 5.4035 L12: -2.1914 REMARK 3 L13: -0.1644 L23: 0.2679 REMARK 3 S TENSOR REMARK 3 S11: -0.1447 S12: 0.0554 S13: -0.0151 REMARK 3 S21: 0.0491 S22: -0.0229 S23: -0.1700 REMARK 3 S31: -0.4611 S32: 0.3209 S33: 0.0850 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 194:209) REMARK 3 ORIGIN FOR THE GROUP (A): -1.2816 -9.9527 -20.8220 REMARK 3 T TENSOR REMARK 3 T11: 0.1668 T22: 0.1902 REMARK 3 T33: 0.1291 T12: 0.0024 REMARK 3 T13: 0.0010 T23: -0.0439 REMARK 3 L TENSOR REMARK 3 L11: 1.0571 L22: 2.0371 REMARK 3 L33: 8.9419 L12: -0.1713 REMARK 3 L13: -0.7473 L23: 0.2236 REMARK 3 S TENSOR REMARK 3 S11: 0.0677 S12: 0.3096 S13: -0.3184 REMARK 3 S21: -0.3992 S22: 0.1484 S23: -0.2029 REMARK 3 S31: 0.2429 S32: 0.3283 S33: -0.0846 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 210:237) REMARK 3 ORIGIN FOR THE GROUP (A): -11.9105 -11.1972 -26.4237 REMARK 3 T TENSOR REMARK 3 T11: 0.0611 T22: 0.0805 REMARK 3 T33: 0.0764 T12: 0.0045 REMARK 3 T13: 0.0060 T23: -0.0123 REMARK 3 L TENSOR REMARK 3 L11: 1.6890 L22: 1.5829 REMARK 3 L33: 1.6898 L12: 0.1600 REMARK 3 L13: 0.7278 L23: 0.2320 REMARK 3 S TENSOR REMARK 3 S11: -0.0241 S12: -0.0344 S13: -0.1016 REMARK 3 S21: 0.0347 S22: 0.0182 S23: -0.0814 REMARK 3 S31: -0.0752 S32: -0.0301 S33: -0.0148 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3VPP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-MAR-12. REMARK 100 THE DEPOSITION ID IS D_1000095345. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1271 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56639 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.640 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.100 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 3.810 REMARK 200 R MERGE (I) : 0.11400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.3300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.65 REMARK 200 R MERGE FOR SHELL (I) : 0.76500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1FM5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 8000, 0.2M MGCL2, 0.1M TRIS REMARK 280 PH8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 310K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.91200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 110 REMARK 465 ARG A 203 REMARK 465 SER A 204 REMARK 465 GLN A 205 REMARK 465 SER A 206 REMARK 465 ALA A 207 REMARK 465 ASN A 208 REMARK 465 ARG A 238 REMARK 465 SER A 239 REMARK 465 SER A 240 REMARK 465 VAL A 241 REMARK 465 SER B 110 REMARK 465 ARG B 203 REMARK 465 SER B 204 REMARK 465 GLN B 205 REMARK 465 SER B 206 REMARK 465 ALA B 207 REMARK 465 ARG B 238 REMARK 465 SER B 239 REMARK 465 SER B 240 REMARK 465 VAL B 241 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 121 -117.53 54.98 REMARK 500 SER A 216 -114.79 57.67 REMARK 500 ASP A 225 55.99 -94.57 REMARK 500 ARG B 121 -117.91 52.69 REMARK 500 SER B 216 -114.64 55.13 REMARK 500 ASP B 225 54.83 -91.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 150 O REMARK 620 2 GLU A 152 OE1 77.3 REMARK 620 3 GLU A 156 OE2 78.3 79.9 REMARK 620 4 GLU A 156 OE1 84.0 127.2 48.0 REMARK 620 5 GLU A 233 OE1 121.7 152.1 121.7 78.0 REMARK 620 6 GLU A 233 OE2 75.6 133.3 129.5 86.6 48.7 REMARK 620 7 HOH A 403 O 102.7 68.9 147.4 163.8 86.0 81.0 REMARK 620 8 HOH A 428 O 156.1 86.8 81.5 91.9 80.0 127.8 87.6 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN B 150 O REMARK 620 2 GLU B 152 OE2 78.9 REMARK 620 3 GLU B 156 OE2 84.8 124.9 REMARK 620 4 GLU B 156 OE1 78.1 76.9 48.2 REMARK 620 5 GLU B 233 OE1 122.8 151.2 79.2 123.1 REMARK 620 6 GLU B 233 OE2 76.3 136.7 87.5 130.3 48.7 REMARK 620 7 HOH B 407 O 104.8 72.6 162.0 148.0 82.8 80.2 REMARK 620 8 HOH B 412 O 153.7 84.0 88.8 78.7 80.7 129.0 88.7 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 301 DBREF 3VPP A 110 241 UNP Q6UXN8 CLC9A_HUMAN 110 241 DBREF 3VPP B 110 241 UNP Q6UXN8 CLC9A_HUMAN 110 241 SEQADV 3VPP ASP A 225 UNP Q6UXN8 SER 225 ENGINEERED MUTATION SEQADV 3VPP ASP B 225 UNP Q6UXN8 SER 225 ENGINEERED MUTATION SEQRES 1 A 132 SER SER PRO CYS PRO ASN ASN TRP ILE GLN ASN ARG GLU SEQRES 2 A 132 SER CYS TYR TYR VAL SER GLU ILE TRP SER ILE TRP HIS SEQRES 3 A 132 THR SER GLN GLU ASN CYS LEU LYS GLU GLY SER THR LEU SEQRES 4 A 132 LEU GLN ILE GLU SER LYS GLU GLU MET ASP PHE ILE THR SEQRES 5 A 132 GLY SER LEU ARG LYS ILE LYS GLY SER TYR ASP TYR TRP SEQRES 6 A 132 VAL GLY LEU SER GLN ASP GLY HIS SER GLY ARG TRP LEU SEQRES 7 A 132 TRP GLN ASP GLY SER SER PRO SER PRO GLY LEU LEU PRO SEQRES 8 A 132 ALA GLU ARG SER GLN SER ALA ASN GLN VAL CYS GLY TYR SEQRES 9 A 132 VAL LYS SER ASN SER LEU LEU SER SER ASN CYS ASP THR SEQRES 10 A 132 TRP LYS TYR PHE ILE CYS GLU LYS TYR ALA LEU ARG SER SEQRES 11 A 132 SER VAL SEQRES 1 B 132 SER SER PRO CYS PRO ASN ASN TRP ILE GLN ASN ARG GLU SEQRES 2 B 132 SER CYS TYR TYR VAL SER GLU ILE TRP SER ILE TRP HIS SEQRES 3 B 132 THR SER GLN GLU ASN CYS LEU LYS GLU GLY SER THR LEU SEQRES 4 B 132 LEU GLN ILE GLU SER LYS GLU GLU MET ASP PHE ILE THR SEQRES 5 B 132 GLY SER LEU ARG LYS ILE LYS GLY SER TYR ASP TYR TRP SEQRES 6 B 132 VAL GLY LEU SER GLN ASP GLY HIS SER GLY ARG TRP LEU SEQRES 7 B 132 TRP GLN ASP GLY SER SER PRO SER PRO GLY LEU LEU PRO SEQRES 8 B 132 ALA GLU ARG SER GLN SER ALA ASN GLN VAL CYS GLY TYR SEQRES 9 B 132 VAL LYS SER ASN SER LEU LEU SER SER ASN CYS ASP THR SEQRES 10 B 132 TRP LYS TYR PHE ILE CYS GLU LYS TYR ALA LEU ARG SER SEQRES 11 B 132 SER VAL HET CA A 301 1 HET CA B 301 1 HETNAM CA CALCIUM ION FORMUL 3 CA 2(CA 2+) FORMUL 5 HOH *310(H2 O) HELIX 1 1 ILE A 133 GLU A 144 1 12 HELIX 2 2 SER A 153 ARG A 165 1 13 HELIX 3 3 ILE B 133 GLU B 144 1 12 HELIX 4 4 SER B 153 ARG B 165 1 13 SHEET 1 A 5 ILE A 118 ASN A 120 0 SHEET 2 A 5 SER A 123 VAL A 127 -1 O TYR A 125 N ILE A 118 SHEET 3 A 5 TYR A 229 TYR A 235 -1 O LYS A 234 N CYS A 124 SHEET 4 A 5 ASP A 172 GLN A 179 1 N TRP A 174 O TYR A 229 SHEET 5 A 5 TRP A 186 TRP A 188 -1 O LEU A 187 N SER A 178 SHEET 1 B 5 THR A 147 LEU A 148 0 SHEET 2 B 5 TYR A 229 TYR A 235 -1 O GLU A 233 N THR A 147 SHEET 3 B 5 ASP A 172 GLN A 179 1 N TRP A 174 O TYR A 229 SHEET 4 B 5 VAL A 210 LYS A 215 -1 O VAL A 210 N GLN A 179 SHEET 5 B 5 SER A 218 ASN A 223 -1 O LEU A 220 N TYR A 213 SHEET 1 C 5 ILE B 118 ASN B 120 0 SHEET 2 C 5 SER B 123 VAL B 127 -1 O TYR B 125 N ILE B 118 SHEET 3 C 5 TYR B 229 TYR B 235 -1 O LYS B 234 N CYS B 124 SHEET 4 C 5 ASP B 172 GLN B 179 1 N TRP B 174 O TYR B 229 SHEET 5 C 5 TRP B 186 TRP B 188 -1 O LEU B 187 N SER B 178 SHEET 1 D 5 THR B 147 LEU B 148 0 SHEET 2 D 5 TYR B 229 TYR B 235 -1 O GLU B 233 N THR B 147 SHEET 3 D 5 ASP B 172 GLN B 179 1 N TRP B 174 O TYR B 229 SHEET 4 D 5 VAL B 210 LYS B 215 -1 O VAL B 214 N TYR B 173 SHEET 5 D 5 SER B 218 ASN B 223 -1 O LEU B 220 N TYR B 213 SSBOND 1 CYS A 113 CYS A 124 1555 1555 2.03 SSBOND 2 CYS A 141 CYS A 232 1555 1555 2.07 SSBOND 3 CYS A 211 CYS A 224 1555 1555 2.04 SSBOND 4 CYS B 113 CYS B 124 1555 1555 2.03 SSBOND 5 CYS B 141 CYS B 232 1555 1555 2.07 SSBOND 6 CYS B 211 CYS B 224 1555 1555 2.03 LINK O GLN A 150 CA CA A 301 1555 1555 2.52 LINK OE1 GLU A 152 CA CA A 301 1555 1555 2.68 LINK OE2 GLU A 156 CA CA A 301 1555 1555 2.71 LINK OE1 GLU A 156 CA CA A 301 1555 1555 2.74 LINK OE1 GLU A 233 CA CA A 301 1555 1555 2.65 LINK OE2 GLU A 233 CA CA A 301 1555 1555 2.74 LINK CA CA A 301 O HOH A 403 1555 1555 2.71 LINK CA CA A 301 O HOH A 428 1555 1555 2.71 LINK O GLN B 150 CA CA B 301 1555 1555 2.51 LINK OE2 GLU B 152 CA CA B 301 1555 1555 2.65 LINK OE2 GLU B 156 CA CA B 301 1555 1555 2.70 LINK OE1 GLU B 156 CA CA B 301 1555 1555 2.73 LINK OE1 GLU B 233 CA CA B 301 1555 1555 2.65 LINK OE2 GLU B 233 CA CA B 301 1555 1555 2.73 LINK CA CA B 301 O HOH B 407 1555 1555 2.72 LINK CA CA B 301 O HOH B 412 1555 1555 2.72 SITE 1 AC1 6 GLN A 150 GLU A 152 GLU A 156 GLU A 233 SITE 2 AC1 6 HOH A 403 HOH A 428 SITE 1 AC2 6 GLN B 150 GLU B 152 GLU B 156 GLU B 233 SITE 2 AC2 6 HOH B 407 HOH B 412 CRYST1 42.170 53.824 57.446 90.00 109.35 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023714 0.000000 0.008329 0.00000 SCALE2 0.000000 0.018579 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018450 0.00000