data_3VW3 # _entry.id 3VW3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3VW3 pdb_00003vw3 10.2210/pdb3vw3/pdb NDB NA1976 ? ? RCSB RCSB095572 ? ? WWPDB D_1000095572 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-03-27 2 'Structure model' 1 1 2014-04-30 3 'Structure model' 1 2 2023-11-08 4 'Structure model' 1 3 2024-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site 7 4 'Structure model' pdbx_entry_details 8 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_dist_value' 4 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 6 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 7 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 8 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 9 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 10 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 11 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 12 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 13 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 14 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 15 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3VW3 _pdbx_database_status.recvd_initial_deposition_date 2012-07-30 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1KEG 'The related antibody Fab in complex with DNA (6-4) photoproduct' unspecified PDB 1EHL 'The related antibody Fab in complex with DNA (6-4) photoproduct' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yokoyama, H.' 1 'Mizutani, R.' 2 'Satow, Y.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structure of a double-stranded DNA (6-4) photoproduct in complex with the 64M-5 antibody Fab' 'Acta Crystallogr.,Sect.D' 69 504 512 2013 ABCRE6 DK 0907-4449 0766 ? 23519658 10.1107/S0907444912050007 1 ;Structure of the DNA (6-4) photoproduct dTT(6-4)TT in complex with the 64M-2 antibody Fab fragment implies increased antibody-binding affinity by the flanking nucleotides ; 'Acta Crystallogr.,Sect.D' 68 232 238 2012 ABCRE6 DK 0907-4449 0766 ? 22349224 10.1107/S0907444912000327 2 'Crystal structure of the 64M-2 antibody Fab fragment in complex with a DNA dT(6-4)T photoproduct formed by ultraviolet radiation' J.Mol.Biol. 299 711 723 2000 JMOBAK UK 0022-2836 0070 ? 10835279 10.1006/jmbi.2000.3772 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yokoyama, H.' 1 ? primary 'Mizutani, R.' 2 ? primary 'Satow, Y.' 3 ? 1 'Yokoyama, H.' 4 ? 1 'Mizutani, R.' 5 ? 1 'Satow, Y.' 6 ? 1 'Sato, K.' 7 ? 1 'Komatsu, Y.' 8 ? 1 'Ohtsuka, E.' 9 ? 1 'Nikaido, O.' 10 ? 2 'Yokoyama, H.' 11 ? 2 'Mizutani, R.' 12 ? 2 'Satow, Y.' 13 ? 2 'Komatsu, Y.' 14 ? 2 'Ohtsuka, E.' 15 ? 2 'Nikaido, O.' 16 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Anti-(6-4) photoproduct antibody 64M-5 Fab (light chain)' 23993.572 1 ? ? ? ? 2 polymer nat 'Anti-(6-4) photoproduct antibody 64M-5 Fab (heavy chain)' 23713.553 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*GP*CP*GP*AP*GP*TP*GP*AP*(64T)P*(5PY)P*AP*TP*GP*GP*AP*CP*GP*G)-3') ; 5638.668 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(*CP*CP*CP*GP*TP*CP*CP*AP*TP*AP*AP*TP*CP*AP*CP*TP*CP*G)-3') ; 5396.507 1 ? ? ? ? 5 non-polymer syn 'COBALT HEXAMMINE(III)' 161.116 1 ? ? ? ? 6 water nat water 18.015 144 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DVLMTQTPLSLPVSLGDQASISCRSSQNIVHSNGYTYLEWYLQKPGQSPKLLIYTVSNRFSGVPDRFSGSGSGTDFTLKI SRVEAEDLGVYYCFRGSHVPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ NGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE ; ;DVLMTQTPLSLPVSLGDQASISCRSSQNIVHSNGYTYLEWYLQKPGQSPKLLIYTVSNRFSGVPDRFSGSGSGTDFTLKI SRVEAEDLGVYYCFRGSHVPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ NGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE ; L ? 2 'polypeptide(L)' no no ;EVQLQQSGTVLARPGASVKMSCKASGYTFTNYWMHWIKQRPGQGLEWIGTIYPGNSDTTYSQKFKGKAKLTAVTSTSTAY MELSSLTNEDSAVYYCSRRNYGSSYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVT WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR ; ;EVQLQQSGTVLARPGASVKMSCKASGYTFTNYWMHWIKQRPGQGLEWIGTIYPGNSDTTYSQKFKGKAKLTAVTSTSTAY MELSSLTNEDSAVYYCSRRNYGSSYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVT WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR ; H ? 3 polydeoxyribonucleotide no yes '(DG)(DC)(DG)(DA)(DG)(DT)(DG)(DA)(64T)(5PY)(DA)(DT)(DG)(DG)(DA)(DC)(DG)(DG)' GCGAGTGATTATGGACGG A ? 4 polydeoxyribonucleotide no no '(DC)(DC)(DC)(DG)(DT)(DC)(DC)(DA)(DT)(DA)(DA)(DT)(DC)(DA)(DC)(DT)(DC)(DG)' CCCGTCCATAATCACTCG B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'COBALT HEXAMMINE(III)' NCO 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 VAL n 1 3 LEU n 1 4 MET n 1 5 THR n 1 6 GLN n 1 7 THR n 1 8 PRO n 1 9 LEU n 1 10 SER n 1 11 LEU n 1 12 PRO n 1 13 VAL n 1 14 SER n 1 15 LEU n 1 16 GLY n 1 17 ASP n 1 18 GLN n 1 19 ALA n 1 20 SER n 1 21 ILE n 1 22 SER n 1 23 CYS n 1 24 ARG n 1 25 SER n 1 26 SER n 1 27 GLN n 1 28 ASN n 1 29 ILE n 1 30 VAL n 1 31 HIS n 1 32 SER n 1 33 ASN n 1 34 GLY n 1 35 TYR n 1 36 THR n 1 37 TYR n 1 38 LEU n 1 39 GLU n 1 40 TRP n 1 41 TYR n 1 42 LEU n 1 43 GLN n 1 44 LYS n 1 45 PRO n 1 46 GLY n 1 47 GLN n 1 48 SER n 1 49 PRO n 1 50 LYS n 1 51 LEU n 1 52 LEU n 1 53 ILE n 1 54 TYR n 1 55 THR n 1 56 VAL n 1 57 SER n 1 58 ASN n 1 59 ARG n 1 60 PHE n 1 61 SER n 1 62 GLY n 1 63 VAL n 1 64 PRO n 1 65 ASP n 1 66 ARG n 1 67 PHE n 1 68 SER n 1 69 GLY n 1 70 SER n 1 71 GLY n 1 72 SER n 1 73 GLY n 1 74 THR n 1 75 ASP n 1 76 PHE n 1 77 THR n 1 78 LEU n 1 79 LYS n 1 80 ILE n 1 81 SER n 1 82 ARG n 1 83 VAL n 1 84 GLU n 1 85 ALA n 1 86 GLU n 1 87 ASP n 1 88 LEU n 1 89 GLY n 1 90 VAL n 1 91 TYR n 1 92 TYR n 1 93 CYS n 1 94 PHE n 1 95 ARG n 1 96 GLY n 1 97 SER n 1 98 HIS n 1 99 VAL n 1 100 PRO n 1 101 THR n 1 102 PHE n 1 103 GLY n 1 104 GLY n 1 105 GLY n 1 106 THR n 1 107 LYS n 1 108 LEU n 1 109 GLU n 1 110 ILE n 1 111 LYS n 1 112 ARG n 1 113 ALA n 1 114 ASP n 1 115 ALA n 1 116 ALA n 1 117 PRO n 1 118 THR n 1 119 VAL n 1 120 SER n 1 121 ILE n 1 122 PHE n 1 123 PRO n 1 124 PRO n 1 125 SER n 1 126 SER n 1 127 GLU n 1 128 GLN n 1 129 LEU n 1 130 THR n 1 131 SER n 1 132 GLY n 1 133 GLY n 1 134 ALA n 1 135 SER n 1 136 VAL n 1 137 VAL n 1 138 CYS n 1 139 PHE n 1 140 LEU n 1 141 ASN n 1 142 ASN n 1 143 PHE n 1 144 TYR n 1 145 PRO n 1 146 LYS n 1 147 ASP n 1 148 ILE n 1 149 ASN n 1 150 VAL n 1 151 LYS n 1 152 TRP n 1 153 LYS n 1 154 ILE n 1 155 ASP n 1 156 GLY n 1 157 SER n 1 158 GLU n 1 159 ARG n 1 160 GLN n 1 161 ASN n 1 162 GLY n 1 163 VAL n 1 164 LEU n 1 165 ASN n 1 166 SER n 1 167 TRP n 1 168 THR n 1 169 ASP n 1 170 GLN n 1 171 ASP n 1 172 SER n 1 173 LYS n 1 174 ASP n 1 175 SER n 1 176 THR n 1 177 TYR n 1 178 SER n 1 179 MET n 1 180 SER n 1 181 SER n 1 182 THR n 1 183 LEU n 1 184 THR n 1 185 LEU n 1 186 THR n 1 187 LYS n 1 188 ASP n 1 189 GLU n 1 190 TYR n 1 191 GLU n 1 192 ARG n 1 193 HIS n 1 194 ASN n 1 195 SER n 1 196 TYR n 1 197 THR n 1 198 CYS n 1 199 GLU n 1 200 ALA n 1 201 THR n 1 202 HIS n 1 203 LYS n 1 204 THR n 1 205 SER n 1 206 THR n 1 207 SER n 1 208 PRO n 1 209 ILE n 1 210 VAL n 1 211 LYS n 1 212 SER n 1 213 PHE n 1 214 ASN n 1 215 ARG n 1 216 ASN n 1 217 GLU n 2 1 GLU n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 GLN n 2 6 GLN n 2 7 SER n 2 8 GLY n 2 9 THR n 2 10 VAL n 2 11 LEU n 2 12 ALA n 2 13 ARG n 2 14 PRO n 2 15 GLY n 2 16 ALA n 2 17 SER n 2 18 VAL n 2 19 LYS n 2 20 MET n 2 21 SER n 2 22 CYS n 2 23 LYS n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 TYR n 2 28 THR n 2 29 PHE n 2 30 THR n 2 31 ASN n 2 32 TYR n 2 33 TRP n 2 34 MET n 2 35 HIS n 2 36 TRP n 2 37 ILE n 2 38 LYS n 2 39 GLN n 2 40 ARG n 2 41 PRO n 2 42 GLY n 2 43 GLN n 2 44 GLY n 2 45 LEU n 2 46 GLU n 2 47 TRP n 2 48 ILE n 2 49 GLY n 2 50 THR n 2 51 ILE n 2 52 TYR n 2 53 PRO n 2 54 GLY n 2 55 ASN n 2 56 SER n 2 57 ASP n 2 58 THR n 2 59 THR n 2 60 TYR n 2 61 SER n 2 62 GLN n 2 63 LYS n 2 64 PHE n 2 65 LYS n 2 66 GLY n 2 67 LYS n 2 68 ALA n 2 69 LYS n 2 70 LEU n 2 71 THR n 2 72 ALA n 2 73 VAL n 2 74 THR n 2 75 SER n 2 76 THR n 2 77 SER n 2 78 THR n 2 79 ALA n 2 80 TYR n 2 81 MET n 2 82 GLU n 2 83 LEU n 2 84 SER n 2 85 SER n 2 86 LEU n 2 87 THR n 2 88 ASN n 2 89 GLU n 2 90 ASP n 2 91 SER n 2 92 ALA n 2 93 VAL n 2 94 TYR n 2 95 TYR n 2 96 CYS n 2 97 SER n 2 98 ARG n 2 99 ARG n 2 100 ASN n 2 101 TYR n 2 102 GLY n 2 103 SER n 2 104 SER n 2 105 TYR n 2 106 ALA n 2 107 MET n 2 108 ASP n 2 109 TYR n 2 110 TRP n 2 111 GLY n 2 112 GLN n 2 113 GLY n 2 114 THR n 2 115 SER n 2 116 VAL n 2 117 THR n 2 118 VAL n 2 119 SER n 2 120 SER n 2 121 ALA n 2 122 LYS n 2 123 THR n 2 124 THR n 2 125 PRO n 2 126 PRO n 2 127 SER n 2 128 VAL n 2 129 TYR n 2 130 PRO n 2 131 LEU n 2 132 ALA n 2 133 PRO n 2 134 GLY n 2 135 SER n 2 136 ALA n 2 137 ALA n 2 138 GLN n 2 139 THR n 2 140 ASN n 2 141 SER n 2 142 MET n 2 143 VAL n 2 144 THR n 2 145 LEU n 2 146 GLY n 2 147 CYS n 2 148 LEU n 2 149 VAL n 2 150 LYS n 2 151 GLY n 2 152 TYR n 2 153 PHE n 2 154 PRO n 2 155 GLU n 2 156 PRO n 2 157 VAL n 2 158 THR n 2 159 VAL n 2 160 THR n 2 161 TRP n 2 162 ASN n 2 163 SER n 2 164 GLY n 2 165 SER n 2 166 LEU n 2 167 SER n 2 168 SER n 2 169 GLY n 2 170 VAL n 2 171 HIS n 2 172 THR n 2 173 PHE n 2 174 PRO n 2 175 ALA n 2 176 VAL n 2 177 LEU n 2 178 GLN n 2 179 SER n 2 180 ASP n 2 181 LEU n 2 182 TYR n 2 183 THR n 2 184 LEU n 2 185 SER n 2 186 SER n 2 187 SER n 2 188 VAL n 2 189 THR n 2 190 VAL n 2 191 PRO n 2 192 SER n 2 193 SER n 2 194 THR n 2 195 TRP n 2 196 PRO n 2 197 SER n 2 198 GLU n 2 199 THR n 2 200 VAL n 2 201 THR n 2 202 CYS n 2 203 ASN n 2 204 VAL n 2 205 ALA n 2 206 HIS n 2 207 PRO n 2 208 ALA n 2 209 SER n 2 210 SER n 2 211 THR n 2 212 LYS n 2 213 VAL n 2 214 ASP n 2 215 LYS n 2 216 LYS n 2 217 ILE n 2 218 VAL n 2 219 PRO n 2 220 ARG n 3 1 DG n 3 2 DC n 3 3 DG n 3 4 DA n 3 5 DG n 3 6 DT n 3 7 DG n 3 8 DA n 3 9 64T n 3 10 5PY n 3 11 DA n 3 12 DT n 3 13 DG n 3 14 DG n 3 15 DA n 3 16 DC n 3 17 DG n 3 18 DG n 4 1 DC n 4 2 DC n 4 3 DC n 4 4 DG n 4 5 DT n 4 6 DC n 4 7 DC n 4 8 DA n 4 9 DT n 4 10 DA n 4 11 DA n 4 12 DT n 4 13 DC n 4 14 DA n 4 15 DC n 4 16 DT n 4 17 DC n 4 18 DG n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? ? 'Mus musculus' 10090 ? ? BALB/c ? ? ? ? ? ? ? ? ? ? ? ? ? hybridoma 2 1 sample ? ? ? 'Mus musculus' 10090 ? ? BALB/c ? ? ? ? ? ? ? ? ? ? ? ? ? hybridoma # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 3 1 sample ? ? ? ? ? 'DNA with (6-4) photoproduct' 4 1 sample ? ? ? ? ? 'synthetic DNA' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5PY 'DNA linking' n "1-(2'-DEOXY-5'-O-PHOSPHONO-BETA-D-ERYTHRO-PENTOFURANOSYL)-5-METHYLPYRIMIDIN-2(1H)-ONE" ? 'C10 H15 N2 O7 P' 306.209 64T 'DNA linking' n "5-HYDROXY-THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H17 N2 O9 P' 340.224 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NCO non-polymer . 'COBALT HEXAMMINE(III)' ? 'Co H18 N6 3' 161.116 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 ? ? ? L . n A 1 2 VAL 2 2 2 VAL VAL L . n A 1 3 LEU 3 3 3 LEU LEU L . n A 1 4 MET 4 4 4 MET MET L . n A 1 5 THR 5 5 5 THR THR L . n A 1 6 GLN 6 6 6 GLN GLN L . n A 1 7 THR 7 7 7 THR THR L . n A 1 8 PRO 8 8 8 PRO PRO L . n A 1 9 LEU 9 9 9 LEU LEU L . n A 1 10 SER 10 10 10 SER SER L . n A 1 11 LEU 11 11 11 LEU LEU L . n A 1 12 PRO 12 12 12 PRO PRO L . n A 1 13 VAL 13 13 13 VAL VAL L . n A 1 14 SER 14 14 14 SER SER L . n A 1 15 LEU 15 15 15 LEU LEU L . n A 1 16 GLY 16 16 16 GLY GLY L . n A 1 17 ASP 17 17 17 ASP ASP L . n A 1 18 GLN 18 18 18 GLN GLN L . n A 1 19 ALA 19 19 19 ALA ALA L . n A 1 20 SER 20 20 20 SER SER L . n A 1 21 ILE 21 21 21 ILE ILE L . n A 1 22 SER 22 22 22 SER SER L . n A 1 23 CYS 23 23 23 CYS CYS L . n A 1 24 ARG 24 24 24 ARG ARG L . n A 1 25 SER 25 25 25 SER SER L . n A 1 26 SER 26 26 26 SER SER L . n A 1 27 GLN 27 27 27 GLN GLN L . n A 1 28 ASN 28 27 27 ASN ASN L A n A 1 29 ILE 29 27 27 ILE ILE L B n A 1 30 VAL 30 27 27 VAL VAL L C n A 1 31 HIS 31 27 27 HIS HIS L D n A 1 32 SER 32 27 27 SER SER L E n A 1 33 ASN 33 28 28 ASN ASN L . n A 1 34 GLY 34 29 29 GLY GLY L . n A 1 35 TYR 35 30 30 TYR TYR L . n A 1 36 THR 36 31 31 THR THR L . n A 1 37 TYR 37 32 32 TYR TYR L . n A 1 38 LEU 38 33 33 LEU LEU L . n A 1 39 GLU 39 34 34 GLU GLU L . n A 1 40 TRP 40 35 35 TRP TRP L . n A 1 41 TYR 41 36 36 TYR TYR L . n A 1 42 LEU 42 37 37 LEU LEU L . n A 1 43 GLN 43 38 38 GLN GLN L . n A 1 44 LYS 44 39 39 LYS LYS L . n A 1 45 PRO 45 40 40 PRO PRO L . n A 1 46 GLY 46 41 41 GLY GLY L . n A 1 47 GLN 47 42 42 GLN GLN L . n A 1 48 SER 48 43 43 SER SER L . n A 1 49 PRO 49 44 44 PRO PRO L . n A 1 50 LYS 50 45 45 LYS LYS L . n A 1 51 LEU 51 46 46 LEU LEU L . n A 1 52 LEU 52 47 47 LEU LEU L . n A 1 53 ILE 53 48 48 ILE ILE L . n A 1 54 TYR 54 49 49 TYR TYR L . n A 1 55 THR 55 50 50 THR THR L . n A 1 56 VAL 56 51 51 VAL VAL L . n A 1 57 SER 57 52 52 SER SER L . n A 1 58 ASN 58 53 53 ASN ASN L . n A 1 59 ARG 59 54 54 ARG ARG L . n A 1 60 PHE 60 55 55 PHE PHE L . n A 1 61 SER 61 56 56 SER SER L . n A 1 62 GLY 62 57 57 GLY GLY L . n A 1 63 VAL 63 58 58 VAL VAL L . n A 1 64 PRO 64 59 59 PRO PRO L . n A 1 65 ASP 65 60 60 ASP ASP L . n A 1 66 ARG 66 61 61 ARG ARG L . n A 1 67 PHE 67 62 62 PHE PHE L . n A 1 68 SER 68 63 63 SER SER L . n A 1 69 GLY 69 64 64 GLY GLY L . n A 1 70 SER 70 65 65 SER SER L . n A 1 71 GLY 71 66 66 GLY GLY L . n A 1 72 SER 72 67 67 SER SER L . n A 1 73 GLY 73 68 68 GLY GLY L . n A 1 74 THR 74 69 69 THR THR L . n A 1 75 ASP 75 70 70 ASP ASP L . n A 1 76 PHE 76 71 71 PHE PHE L . n A 1 77 THR 77 72 72 THR THR L . n A 1 78 LEU 78 73 73 LEU LEU L . n A 1 79 LYS 79 74 74 LYS LYS L . n A 1 80 ILE 80 75 75 ILE ILE L . n A 1 81 SER 81 76 76 SER SER L . n A 1 82 ARG 82 77 77 ARG ARG L . n A 1 83 VAL 83 78 78 VAL VAL L . n A 1 84 GLU 84 79 79 GLU GLU L . n A 1 85 ALA 85 80 80 ALA ALA L . n A 1 86 GLU 86 81 81 GLU GLU L . n A 1 87 ASP 87 82 82 ASP ASP L . n A 1 88 LEU 88 83 83 LEU LEU L . n A 1 89 GLY 89 84 84 GLY GLY L . n A 1 90 VAL 90 85 85 VAL VAL L . n A 1 91 TYR 91 86 86 TYR TYR L . n A 1 92 TYR 92 87 87 TYR TYR L . n A 1 93 CYS 93 88 88 CYS CYS L . n A 1 94 PHE 94 89 89 PHE PHE L . n A 1 95 ARG 95 90 90 ARG ARG L . n A 1 96 GLY 96 91 91 GLY GLY L . n A 1 97 SER 97 92 92 SER SER L . n A 1 98 HIS 98 93 93 HIS HIS L . n A 1 99 VAL 99 94 94 VAL VAL L . n A 1 100 PRO 100 95 95 PRO PRO L . n A 1 101 THR 101 97 97 THR THR L . n A 1 102 PHE 102 98 98 PHE PHE L . n A 1 103 GLY 103 99 99 GLY GLY L . n A 1 104 GLY 104 100 100 GLY GLY L . n A 1 105 GLY 105 101 101 GLY GLY L . n A 1 106 THR 106 102 102 THR THR L . n A 1 107 LYS 107 103 103 LYS LYS L . n A 1 108 LEU 108 104 104 LEU LEU L . n A 1 109 GLU 109 105 105 GLU GLU L . n A 1 110 ILE 110 106 106 ILE ILE L . n A 1 111 LYS 111 107 107 LYS LYS L . n A 1 112 ARG 112 108 108 ARG ARG L . n A 1 113 ALA 113 109 109 ALA ALA L . n A 1 114 ASP 114 110 110 ASP ASP L . n A 1 115 ALA 115 111 111 ALA ALA L . n A 1 116 ALA 116 112 112 ALA ALA L . n A 1 117 PRO 117 113 113 PRO PRO L . n A 1 118 THR 118 114 114 THR THR L . n A 1 119 VAL 119 115 115 VAL VAL L . n A 1 120 SER 120 116 116 SER SER L . n A 1 121 ILE 121 117 117 ILE ILE L . n A 1 122 PHE 122 118 118 PHE PHE L . n A 1 123 PRO 123 119 119 PRO PRO L . n A 1 124 PRO 124 120 120 PRO PRO L . n A 1 125 SER 125 121 121 SER SER L . n A 1 126 SER 126 122 122 SER SER L . n A 1 127 GLU 127 123 123 GLU GLU L . n A 1 128 GLN 128 124 124 GLN GLN L . n A 1 129 LEU 129 125 125 LEU LEU L . n A 1 130 THR 130 126 126 THR THR L . n A 1 131 SER 131 127 127 SER SER L . n A 1 132 GLY 132 128 128 GLY GLY L . n A 1 133 GLY 133 129 129 GLY GLY L . n A 1 134 ALA 134 130 130 ALA ALA L . n A 1 135 SER 135 131 131 SER SER L . n A 1 136 VAL 136 132 132 VAL VAL L . n A 1 137 VAL 137 133 133 VAL VAL L . n A 1 138 CYS 138 134 134 CYS CYS L . n A 1 139 PHE 139 135 135 PHE PHE L . n A 1 140 LEU 140 136 136 LEU LEU L . n A 1 141 ASN 141 137 137 ASN ASN L . n A 1 142 ASN 142 138 138 ASN ASN L . n A 1 143 PHE 143 139 139 PHE PHE L . n A 1 144 TYR 144 140 140 TYR TYR L . n A 1 145 PRO 145 141 141 PRO PRO L . n A 1 146 LYS 146 142 142 LYS LYS L . n A 1 147 ASP 147 143 143 ASP ASP L . n A 1 148 ILE 148 144 144 ILE ILE L . n A 1 149 ASN 149 145 145 ASN ASN L . n A 1 150 VAL 150 146 146 VAL VAL L . n A 1 151 LYS 151 147 147 LYS LYS L . n A 1 152 TRP 152 148 148 TRP TRP L . n A 1 153 LYS 153 149 149 LYS LYS L . n A 1 154 ILE 154 150 150 ILE ILE L . n A 1 155 ASP 155 151 151 ASP ASP L . n A 1 156 GLY 156 152 152 GLY GLY L . n A 1 157 SER 157 153 153 SER SER L . n A 1 158 GLU 158 154 154 GLU GLU L . n A 1 159 ARG 159 155 155 ARG ARG L . n A 1 160 GLN 160 156 156 GLN GLN L . n A 1 161 ASN 161 157 157 ASN ASN L . n A 1 162 GLY 162 158 158 GLY GLY L . n A 1 163 VAL 163 159 159 VAL VAL L . n A 1 164 LEU 164 160 160 LEU LEU L . n A 1 165 ASN 165 161 161 ASN ASN L . n A 1 166 SER 166 162 162 SER SER L . n A 1 167 TRP 167 163 163 TRP TRP L . n A 1 168 THR 168 164 164 THR THR L . n A 1 169 ASP 169 165 165 ASP ASP L . n A 1 170 GLN 170 166 166 GLN GLN L . n A 1 171 ASP 171 167 167 ASP ASP L . n A 1 172 SER 172 168 168 SER SER L . n A 1 173 LYS 173 169 169 LYS LYS L . n A 1 174 ASP 174 170 170 ASP ASP L . n A 1 175 SER 175 171 171 SER SER L . n A 1 176 THR 176 172 172 THR THR L . n A 1 177 TYR 177 173 173 TYR TYR L . n A 1 178 SER 178 174 174 SER SER L . n A 1 179 MET 179 175 175 MET MET L . n A 1 180 SER 180 176 176 SER SER L . n A 1 181 SER 181 177 177 SER SER L . n A 1 182 THR 182 178 178 THR THR L . n A 1 183 LEU 183 179 179 LEU LEU L . n A 1 184 THR 184 180 180 THR THR L . n A 1 185 LEU 185 181 181 LEU LEU L . n A 1 186 THR 186 182 182 THR THR L . n A 1 187 LYS 187 183 183 LYS LYS L . n A 1 188 ASP 188 184 184 ASP ASP L . n A 1 189 GLU 189 185 185 GLU GLU L . n A 1 190 TYR 190 186 186 TYR TYR L . n A 1 191 GLU 191 187 187 GLU GLU L . n A 1 192 ARG 192 188 188 ARG ARG L . n A 1 193 HIS 193 189 189 HIS HIS L . n A 1 194 ASN 194 190 190 ASN ASN L . n A 1 195 SER 195 191 191 SER SER L . n A 1 196 TYR 196 192 192 TYR TYR L . n A 1 197 THR 197 193 193 THR THR L . n A 1 198 CYS 198 194 194 CYS CYS L . n A 1 199 GLU 199 195 195 GLU GLU L . n A 1 200 ALA 200 196 196 ALA ALA L . n A 1 201 THR 201 197 197 THR THR L . n A 1 202 HIS 202 198 198 HIS HIS L . n A 1 203 LYS 203 199 199 LYS LYS L . n A 1 204 THR 204 200 200 THR THR L . n A 1 205 SER 205 201 201 SER SER L . n A 1 206 THR 206 202 202 THR THR L . n A 1 207 SER 207 203 203 SER SER L . n A 1 208 PRO 208 204 204 PRO PRO L . n A 1 209 ILE 209 205 205 ILE ILE L . n A 1 210 VAL 210 206 206 VAL VAL L . n A 1 211 LYS 211 207 207 LYS LYS L . n A 1 212 SER 212 208 208 SER SER L . n A 1 213 PHE 213 209 209 PHE PHE L . n A 1 214 ASN 214 210 210 ASN ASN L . n A 1 215 ARG 215 211 211 ARG ARG L . n A 1 216 ASN 216 212 212 ASN ASN L . n A 1 217 GLU 217 213 ? ? ? L . n B 2 1 GLU 1 1 1 GLU GLU H . n B 2 2 VAL 2 2 2 VAL VAL H . n B 2 3 GLN 3 3 3 GLN GLN H . n B 2 4 LEU 4 4 4 LEU LEU H . n B 2 5 GLN 5 5 5 GLN GLN H . n B 2 6 GLN 6 6 6 GLN GLN H . n B 2 7 SER 7 7 7 SER SER H . n B 2 8 GLY 8 8 8 GLY GLY H . n B 2 9 THR 9 9 9 THR THR H . n B 2 10 VAL 10 10 10 VAL VAL H . n B 2 11 LEU 11 11 11 LEU LEU H . n B 2 12 ALA 12 12 12 ALA ALA H . n B 2 13 ARG 13 13 13 ARG ARG H . n B 2 14 PRO 14 14 14 PRO PRO H . n B 2 15 GLY 15 15 15 GLY GLY H . n B 2 16 ALA 16 16 16 ALA ALA H . n B 2 17 SER 17 17 17 SER SER H . n B 2 18 VAL 18 18 18 VAL VAL H . n B 2 19 LYS 19 19 19 LYS LYS H . n B 2 20 MET 20 20 20 MET MET H . n B 2 21 SER 21 21 21 SER SER H . n B 2 22 CYS 22 22 22 CYS CYS H . n B 2 23 LYS 23 23 23 LYS LYS H . n B 2 24 ALA 24 24 24 ALA ALA H . n B 2 25 SER 25 25 25 SER SER H . n B 2 26 GLY 26 26 26 GLY GLY H . n B 2 27 TYR 27 27 27 TYR TYR H . n B 2 28 THR 28 28 28 THR THR H . n B 2 29 PHE 29 29 29 PHE PHE H . n B 2 30 THR 30 30 30 THR THR H . n B 2 31 ASN 31 31 31 ASN ASN H . n B 2 32 TYR 32 32 32 TYR TYR H . n B 2 33 TRP 33 33 33 TRP TRP H . n B 2 34 MET 34 34 34 MET MET H . n B 2 35 HIS 35 35 35 HIS HIS H . n B 2 36 TRP 36 36 36 TRP TRP H . n B 2 37 ILE 37 37 37 ILE ILE H . n B 2 38 LYS 38 38 38 LYS LYS H . n B 2 39 GLN 39 39 39 GLN GLN H . n B 2 40 ARG 40 40 40 ARG ARG H . n B 2 41 PRO 41 41 41 PRO PRO H . n B 2 42 GLY 42 42 42 GLY GLY H . n B 2 43 GLN 43 43 43 GLN GLN H . n B 2 44 GLY 44 44 44 GLY GLY H . n B 2 45 LEU 45 45 45 LEU LEU H . n B 2 46 GLU 46 46 46 GLU GLU H . n B 2 47 TRP 47 47 47 TRP TRP H . n B 2 48 ILE 48 48 48 ILE ILE H . n B 2 49 GLY 49 49 49 GLY GLY H . n B 2 50 THR 50 50 50 THR THR H . n B 2 51 ILE 51 51 51 ILE ILE H . n B 2 52 TYR 52 52 52 TYR TYR H . n B 2 53 PRO 53 52 52 PRO PRO H A n B 2 54 GLY 54 53 53 GLY GLY H . n B 2 55 ASN 55 54 54 ASN ASN H . n B 2 56 SER 56 55 55 SER SER H . n B 2 57 ASP 57 56 56 ASP ASP H . n B 2 58 THR 58 57 57 THR THR H . n B 2 59 THR 59 58 58 THR THR H . n B 2 60 TYR 60 59 59 TYR TYR H . n B 2 61 SER 61 60 60 SER SER H . n B 2 62 GLN 62 61 61 GLN GLN H . n B 2 63 LYS 63 62 62 LYS LYS H . n B 2 64 PHE 64 63 63 PHE PHE H . n B 2 65 LYS 65 64 64 LYS LYS H . n B 2 66 GLY 66 65 65 GLY GLY H . n B 2 67 LYS 67 66 66 LYS LYS H . n B 2 68 ALA 68 67 67 ALA ALA H . n B 2 69 LYS 69 68 68 LYS LYS H . n B 2 70 LEU 70 69 69 LEU LEU H . n B 2 71 THR 71 70 70 THR THR H . n B 2 72 ALA 72 71 71 ALA ALA H . n B 2 73 VAL 73 72 72 VAL VAL H . n B 2 74 THR 74 73 73 THR THR H . n B 2 75 SER 75 74 74 SER SER H . n B 2 76 THR 76 75 75 THR THR H . n B 2 77 SER 77 76 76 SER SER H . n B 2 78 THR 78 77 77 THR THR H . n B 2 79 ALA 79 78 78 ALA ALA H . n B 2 80 TYR 80 79 79 TYR TYR H . n B 2 81 MET 81 80 80 MET MET H . n B 2 82 GLU 82 81 81 GLU GLU H . n B 2 83 LEU 83 82 82 LEU LEU H . n B 2 84 SER 84 82 82 SER SER H A n B 2 85 SER 85 82 82 SER SER H B n B 2 86 LEU 86 82 82 LEU LEU H C n B 2 87 THR 87 83 83 THR THR H . n B 2 88 ASN 88 84 84 ASN ASN H . n B 2 89 GLU 89 85 85 GLU GLU H . n B 2 90 ASP 90 86 86 ASP ASP H . n B 2 91 SER 91 87 87 SER SER H . n B 2 92 ALA 92 88 88 ALA ALA H . n B 2 93 VAL 93 89 89 VAL VAL H . n B 2 94 TYR 94 90 90 TYR TYR H . n B 2 95 TYR 95 91 91 TYR TYR H . n B 2 96 CYS 96 92 92 CYS CYS H . n B 2 97 SER 97 93 93 SER SER H . n B 2 98 ARG 98 94 94 ARG ARG H . n B 2 99 ARG 99 95 95 ARG ARG H . n B 2 100 ASN 100 96 96 ASN ASN H . n B 2 101 TYR 101 97 97 TYR TYR H . n B 2 102 GLY 102 98 98 GLY GLY H . n B 2 103 SER 103 99 99 SER SER H . n B 2 104 SER 104 100 100 SER SER H . n B 2 105 TYR 105 100 100 TYR TYR H I n B 2 106 ALA 106 100 100 ALA ALA H J n B 2 107 MET 107 100 100 MET MET H K n B 2 108 ASP 108 101 101 ASP ASP H . n B 2 109 TYR 109 102 102 TYR TYR H . n B 2 110 TRP 110 103 103 TRP TRP H . n B 2 111 GLY 111 104 104 GLY GLY H . n B 2 112 GLN 112 105 105 GLN GLN H . n B 2 113 GLY 113 106 106 GLY GLY H . n B 2 114 THR 114 107 107 THR THR H . n B 2 115 SER 115 108 108 SER SER H . n B 2 116 VAL 116 109 109 VAL VAL H . n B 2 117 THR 117 110 110 THR THR H . n B 2 118 VAL 118 111 111 VAL VAL H . n B 2 119 SER 119 112 112 SER SER H . n B 2 120 SER 120 113 113 SER SER H . n B 2 121 ALA 121 114 114 ALA ALA H . n B 2 122 LYS 122 115 115 LYS LYS H . n B 2 123 THR 123 116 116 THR THR H . n B 2 124 THR 124 117 117 THR THR H . n B 2 125 PRO 125 118 118 PRO PRO H . n B 2 126 PRO 126 119 119 PRO PRO H . n B 2 127 SER 127 120 120 SER SER H . n B 2 128 VAL 128 121 121 VAL VAL H . n B 2 129 TYR 129 122 122 TYR TYR H . n B 2 130 PRO 130 123 123 PRO PRO H . n B 2 131 LEU 131 124 124 LEU LEU H . n B 2 132 ALA 132 125 125 ALA ALA H . n B 2 133 PRO 133 126 126 PRO PRO H . n B 2 134 GLY 134 127 127 GLY GLY H . n B 2 135 SER 135 128 128 SER SER H . n B 2 136 ALA 136 129 129 ALA ALA H . n B 2 137 ALA 137 130 130 ALA ALA H . n B 2 138 GLN 138 133 133 GLN GLN H . n B 2 139 THR 139 134 134 THR THR H . n B 2 140 ASN 140 135 ? ? ? H . n B 2 141 SER 141 136 136 SER SER H . n B 2 142 MET 142 137 137 MET MET H . n B 2 143 VAL 143 138 138 VAL VAL H . n B 2 144 THR 144 139 139 THR THR H . n B 2 145 LEU 145 140 140 LEU LEU H . n B 2 146 GLY 146 141 141 GLY GLY H . n B 2 147 CYS 147 142 142 CYS CYS H . n B 2 148 LEU 148 143 143 LEU LEU H . n B 2 149 VAL 149 144 144 VAL VAL H . n B 2 150 LYS 150 145 145 LYS LYS H . n B 2 151 GLY 151 146 146 GLY GLY H . n B 2 152 TYR 152 147 147 TYR TYR H . n B 2 153 PHE 153 148 148 PHE PHE H . n B 2 154 PRO 154 149 149 PRO PRO H . n B 2 155 GLU 155 150 150 GLU GLU H . n B 2 156 PRO 156 151 151 PRO PRO H . n B 2 157 VAL 157 152 152 VAL VAL H . n B 2 158 THR 158 153 153 THR THR H . n B 2 159 VAL 159 154 154 VAL VAL H . n B 2 160 THR 160 156 156 THR THR H . n B 2 161 TRP 161 157 157 TRP TRP H . n B 2 162 ASN 162 162 162 ASN ASN H . n B 2 163 SER 163 163 163 SER SER H . n B 2 164 GLY 164 164 164 GLY GLY H . n B 2 165 SER 165 165 165 SER SER H . n B 2 166 LEU 166 166 166 LEU LEU H . n B 2 167 SER 167 167 167 SER SER H . n B 2 168 SER 168 168 168 SER SER H . n B 2 169 GLY 169 169 169 GLY GLY H . n B 2 170 VAL 170 171 171 VAL VAL H . n B 2 171 HIS 171 172 172 HIS HIS H . n B 2 172 THR 172 173 173 THR THR H . n B 2 173 PHE 173 174 174 PHE PHE H . n B 2 174 PRO 174 175 175 PRO PRO H . n B 2 175 ALA 175 176 176 ALA ALA H . n B 2 176 VAL 176 177 177 VAL VAL H . n B 2 177 LEU 177 178 178 LEU LEU H . n B 2 178 GLN 178 179 179 GLN GLN H . n B 2 179 SER 179 180 180 SER SER H . n B 2 180 ASP 180 183 183 ASP ASP H . n B 2 181 LEU 181 184 184 LEU LEU H . n B 2 182 TYR 182 185 185 TYR TYR H . n B 2 183 THR 183 186 186 THR THR H . n B 2 184 LEU 184 187 187 LEU LEU H . n B 2 185 SER 185 188 188 SER SER H . n B 2 186 SER 186 189 189 SER SER H . n B 2 187 SER 187 190 190 SER SER H . n B 2 188 VAL 188 191 191 VAL VAL H . n B 2 189 THR 189 192 192 THR THR H . n B 2 190 VAL 190 193 ? ? ? H . n B 2 191 PRO 191 194 ? ? ? H . n B 2 192 SER 192 195 ? ? ? H . n B 2 193 SER 193 196 196 SER SER H . n B 2 194 THR 194 199 199 THR THR H . n B 2 195 TRP 195 200 200 TRP TRP H . n B 2 196 PRO 196 202 202 PRO PRO H . n B 2 197 SER 197 203 203 SER SER H . n B 2 198 GLU 198 204 204 GLU GLU H . n B 2 199 THR 199 205 205 THR THR H . n B 2 200 VAL 200 206 206 VAL VAL H . n B 2 201 THR 201 207 207 THR THR H . n B 2 202 CYS 202 208 208 CYS CYS H . n B 2 203 ASN 203 209 209 ASN ASN H . n B 2 204 VAL 204 210 210 VAL VAL H . n B 2 205 ALA 205 211 211 ALA ALA H . n B 2 206 HIS 206 212 212 HIS HIS H . n B 2 207 PRO 207 213 213 PRO PRO H . n B 2 208 ALA 208 214 214 ALA ALA H . n B 2 209 SER 209 215 215 SER SER H . n B 2 210 SER 210 216 216 SER SER H . n B 2 211 THR 211 217 217 THR THR H . n B 2 212 LYS 212 218 218 LYS LYS H . n B 2 213 VAL 213 219 219 VAL VAL H . n B 2 214 ASP 214 220 220 ASP ASP H . n B 2 215 LYS 215 221 221 LYS LYS H . n B 2 216 LYS 216 222 222 LYS LYS H . n B 2 217 ILE 217 223 223 ILE ILE H . n B 2 218 VAL 218 226 226 VAL VAL H . n B 2 219 PRO 219 227 227 PRO PRO H . n B 2 220 ARG 220 228 228 ARG ARG H . n C 3 1 DG 1 1 1 DG DG A . n C 3 2 DC 2 2 2 DC DC A . n C 3 3 DG 3 3 3 DG DG A . n C 3 4 DA 4 4 4 DA DA A . n C 3 5 DG 5 5 5 DG DG A . n C 3 6 DT 6 6 6 DT DT A . n C 3 7 DG 7 7 7 DG DG A . n C 3 8 DA 8 8 8 DA DA A . n C 3 9 64T 9 9 9 64T 64T A . n C 3 10 5PY 10 10 10 5PY 5PY A . n C 3 11 DA 11 11 11 DA DA A . n C 3 12 DT 12 12 12 DT DT A . n C 3 13 DG 13 13 13 DG DG A . n C 3 14 DG 14 14 14 DG DG A . n C 3 15 DA 15 15 15 DA DA A . n C 3 16 DC 16 16 16 DC DC A . n C 3 17 DG 17 17 17 DG DG A . n C 3 18 DG 18 18 18 DG DG A . n D 4 1 DC 1 1 1 DC DC B . n D 4 2 DC 2 2 2 DC DC B . n D 4 3 DC 3 3 3 DC DC B . n D 4 4 DG 4 4 4 DG DG B . n D 4 5 DT 5 5 5 DT DT B . n D 4 6 DC 6 6 6 DC DC B . n D 4 7 DC 7 7 7 DC DC B . n D 4 8 DA 8 8 8 DA DA B . n D 4 9 DT 9 9 9 DT DT B . n D 4 10 DA 10 10 10 DA DA B . n D 4 11 DA 11 11 11 DA DA B . n D 4 12 DT 12 12 12 DT DT B . n D 4 13 DC 13 13 13 DC DC B . n D 4 14 DA 14 14 14 DA DA B . n D 4 15 DC 15 15 15 DC DC B . n D 4 16 DT 16 16 16 DT DT B . n D 4 17 DC 17 17 17 DC DC B . n D 4 18 DG 18 18 18 DG DG B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 NCO 1 301 201 NCO NCO H . F 6 HOH 1 301 1 HOH HOH L . F 6 HOH 2 302 2 HOH HOH L . F 6 HOH 3 303 4 HOH HOH L . F 6 HOH 4 304 14 HOH HOH L . F 6 HOH 5 305 15 HOH HOH L . F 6 HOH 6 306 16 HOH HOH L . F 6 HOH 7 307 17 HOH HOH L . F 6 HOH 8 308 26 HOH HOH L . F 6 HOH 9 309 27 HOH HOH L . F 6 HOH 10 310 28 HOH HOH L . F 6 HOH 11 311 33 HOH HOH L . F 6 HOH 12 312 39 HOH HOH L . F 6 HOH 13 313 41 HOH HOH L . F 6 HOH 14 314 43 HOH HOH L . F 6 HOH 15 315 46 HOH HOH L . F 6 HOH 16 316 50 HOH HOH L . F 6 HOH 17 317 53 HOH HOH L . F 6 HOH 18 318 54 HOH HOH L . F 6 HOH 19 319 57 HOH HOH L . F 6 HOH 20 320 64 HOH HOH L . F 6 HOH 21 321 66 HOH HOH L . F 6 HOH 22 322 67 HOH HOH L . F 6 HOH 23 323 68 HOH HOH L . F 6 HOH 24 324 69 HOH HOH L . F 6 HOH 25 325 70 HOH HOH L . F 6 HOH 26 326 71 HOH HOH L . F 6 HOH 27 327 72 HOH HOH L . F 6 HOH 28 328 75 HOH HOH L . F 6 HOH 29 329 76 HOH HOH L . F 6 HOH 30 330 77 HOH HOH L . F 6 HOH 31 331 80 HOH HOH L . F 6 HOH 32 332 81 HOH HOH L . F 6 HOH 33 333 87 HOH HOH L . F 6 HOH 34 334 91 HOH HOH L . F 6 HOH 35 335 92 HOH HOH L . F 6 HOH 36 336 93 HOH HOH L . F 6 HOH 37 337 100 HOH HOH L . F 6 HOH 38 338 101 HOH HOH L . F 6 HOH 39 339 104 HOH HOH L . F 6 HOH 40 340 105 HOH HOH L . F 6 HOH 41 341 115 HOH HOH L . F 6 HOH 42 342 116 HOH HOH L . F 6 HOH 43 343 117 HOH HOH L . F 6 HOH 44 344 119 HOH HOH L . F 6 HOH 45 345 122 HOH HOH L . F 6 HOH 46 346 124 HOH HOH L . F 6 HOH 47 347 125 HOH HOH L . F 6 HOH 48 348 127 HOH HOH L . F 6 HOH 49 349 128 HOH HOH L . F 6 HOH 50 350 133 HOH HOH L . F 6 HOH 51 351 136 HOH HOH L . F 6 HOH 52 352 137 HOH HOH L . F 6 HOH 53 353 138 HOH HOH L . G 6 HOH 1 401 3 HOH HOH H . G 6 HOH 2 402 5 HOH HOH H . G 6 HOH 3 403 6 HOH HOH H . G 6 HOH 4 404 7 HOH HOH H . G 6 HOH 5 405 8 HOH HOH H . G 6 HOH 6 406 9 HOH HOH H . G 6 HOH 7 407 10 HOH HOH H . G 6 HOH 8 408 11 HOH HOH H . G 6 HOH 9 409 12 HOH HOH H . G 6 HOH 10 410 18 HOH HOH H . G 6 HOH 11 411 20 HOH HOH H . G 6 HOH 12 412 21 HOH HOH H . G 6 HOH 13 413 22 HOH HOH H . G 6 HOH 14 414 23 HOH HOH H . G 6 HOH 15 415 24 HOH HOH H . G 6 HOH 16 416 25 HOH HOH H . G 6 HOH 17 417 30 HOH HOH H . G 6 HOH 18 418 31 HOH HOH H . G 6 HOH 19 419 32 HOH HOH H . G 6 HOH 20 420 35 HOH HOH H . G 6 HOH 21 421 37 HOH HOH H . G 6 HOH 22 422 40 HOH HOH H . G 6 HOH 23 423 42 HOH HOH H . G 6 HOH 24 424 44 HOH HOH H . G 6 HOH 25 425 45 HOH HOH H . G 6 HOH 26 426 47 HOH HOH H . G 6 HOH 27 427 48 HOH HOH H . G 6 HOH 28 428 49 HOH HOH H . G 6 HOH 29 429 51 HOH HOH H . G 6 HOH 30 430 52 HOH HOH H . G 6 HOH 31 431 55 HOH HOH H . G 6 HOH 32 432 56 HOH HOH H . G 6 HOH 33 433 58 HOH HOH H . G 6 HOH 34 434 59 HOH HOH H . G 6 HOH 35 435 61 HOH HOH H . G 6 HOH 36 436 62 HOH HOH H . G 6 HOH 37 437 63 HOH HOH H . G 6 HOH 38 438 65 HOH HOH H . G 6 HOH 39 439 73 HOH HOH H . G 6 HOH 40 440 74 HOH HOH H . G 6 HOH 41 441 78 HOH HOH H . G 6 HOH 42 442 79 HOH HOH H . G 6 HOH 43 443 82 HOH HOH H . G 6 HOH 44 444 83 HOH HOH H . G 6 HOH 45 445 84 HOH HOH H . G 6 HOH 46 446 85 HOH HOH H . G 6 HOH 47 447 86 HOH HOH H . G 6 HOH 48 448 88 HOH HOH H . G 6 HOH 49 449 89 HOH HOH H . G 6 HOH 50 450 90 HOH HOH H . G 6 HOH 51 451 95 HOH HOH H . G 6 HOH 52 452 97 HOH HOH H . G 6 HOH 53 453 98 HOH HOH H . G 6 HOH 54 454 99 HOH HOH H . G 6 HOH 55 455 102 HOH HOH H . G 6 HOH 56 456 107 HOH HOH H . G 6 HOH 57 457 108 HOH HOH H . G 6 HOH 58 458 110 HOH HOH H . G 6 HOH 59 459 112 HOH HOH H . G 6 HOH 60 460 113 HOH HOH H . G 6 HOH 61 461 114 HOH HOH H . G 6 HOH 62 462 118 HOH HOH H . G 6 HOH 63 463 120 HOH HOH H . G 6 HOH 64 464 121 HOH HOH H . G 6 HOH 65 465 123 HOH HOH H . G 6 HOH 66 466 129 HOH HOH H . G 6 HOH 67 467 130 HOH HOH H . G 6 HOH 68 468 132 HOH HOH H . G 6 HOH 69 469 134 HOH HOH H . G 6 HOH 70 470 135 HOH HOH H . G 6 HOH 71 471 143 HOH HOH H . G 6 HOH 72 472 144 HOH HOH H . H 6 HOH 1 101 13 HOH HOH A . H 6 HOH 2 102 29 HOH HOH A . H 6 HOH 3 103 36 HOH HOH A . H 6 HOH 4 104 96 HOH HOH A . H 6 HOH 5 105 103 HOH HOH A . H 6 HOH 6 106 109 HOH HOH A . H 6 HOH 7 107 131 HOH HOH A . H 6 HOH 8 108 139 HOH HOH A . H 6 HOH 9 109 140 HOH HOH A . H 6 HOH 10 110 141 HOH HOH A . H 6 HOH 11 111 142 HOH HOH A . I 6 HOH 1 101 19 HOH HOH B . I 6 HOH 2 102 34 HOH HOH B . I 6 HOH 3 103 38 HOH HOH B . I 6 HOH 4 104 60 HOH HOH B . I 6 HOH 5 105 94 HOH HOH B . I 6 HOH 6 106 106 HOH HOH B . I 6 HOH 7 107 111 HOH HOH B . I 6 HOH 8 108 126 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 L LEU 3 ? CG ? A LEU 3 CG 2 1 Y 0 L LEU 3 ? CD1 ? A LEU 3 CD1 3 1 Y 0 L LEU 3 ? CD2 ? A LEU 3 CD2 4 1 Y 0 L ARG 24 ? CG ? A ARG 24 CG 5 1 Y 0 L ARG 24 ? CD ? A ARG 24 CD 6 1 Y 0 L ARG 24 ? NE ? A ARG 24 NE 7 1 Y 0 L ARG 24 ? CZ ? A ARG 24 CZ 8 1 Y 0 L ARG 24 ? NH1 ? A ARG 24 NH1 9 1 Y 0 L ARG 24 ? NH2 ? A ARG 24 NH2 10 1 Y 0 L SER 63 ? OG ? A SER 68 OG 11 1 Y 0 L ILE 106 ? CG1 ? A ILE 110 CG1 12 1 Y 0 L ILE 106 ? CG2 ? A ILE 110 CG2 13 1 Y 0 L ILE 106 ? CD1 ? A ILE 110 CD1 14 1 Y 0 L LEU 125 ? CG ? A LEU 129 CG 15 1 Y 0 L LEU 125 ? CD1 ? A LEU 129 CD1 16 1 Y 0 L LEU 125 ? CD2 ? A LEU 129 CD2 17 1 Y 0 L THR 126 ? OG1 ? A THR 130 OG1 18 1 Y 0 L THR 126 ? CG2 ? A THR 130 CG2 19 1 Y 0 L SER 127 ? OG ? A SER 131 OG 20 1 Y 0 L GLN 156 ? CG ? A GLN 160 CG 21 1 Y 0 L GLN 156 ? CD ? A GLN 160 CD 22 1 Y 0 L GLN 156 ? OE1 ? A GLN 160 OE1 23 1 Y 0 L GLN 156 ? NE2 ? A GLN 160 NE2 24 1 Y 0 L ASN 157 ? CG ? A ASN 161 CG 25 1 Y 0 L ASN 157 ? OD1 ? A ASN 161 OD1 26 1 Y 0 L ASN 157 ? ND2 ? A ASN 161 ND2 27 1 Y 0 L LEU 181 ? CG ? A LEU 185 CG 28 1 Y 0 L LEU 181 ? CD1 ? A LEU 185 CD1 29 1 Y 0 L LEU 181 ? CD2 ? A LEU 185 CD2 30 1 Y 0 L LYS 183 ? CG ? A LYS 187 CG 31 1 Y 0 L LYS 183 ? CD ? A LYS 187 CD 32 1 Y 0 L LYS 183 ? CE ? A LYS 187 CE 33 1 Y 0 L LYS 183 ? NZ ? A LYS 187 NZ 34 1 Y 0 L THR 197 ? OG1 ? A THR 201 OG1 35 1 Y 0 L THR 197 ? CG2 ? A THR 201 CG2 36 1 Y 0 L ASN 212 ? CG ? A ASN 216 CG 37 1 Y 0 L ASN 212 ? OD1 ? A ASN 216 OD1 38 1 Y 0 L ASN 212 ? ND2 ? A ASN 216 ND2 39 1 Y 0 H SER 113 ? OG ? B SER 120 OG 40 1 Y 0 H VAL 144 ? CG1 ? B VAL 149 CG1 41 1 Y 0 H VAL 144 ? CG2 ? B VAL 149 CG2 42 1 Y 0 H SER 167 ? OG ? B SER 167 OG 43 1 Y 0 H THR 199 ? OG1 ? B THR 194 OG1 44 1 Y 0 H THR 199 ? CG2 ? B THR 194 CG2 45 1 Y 0 H SER 203 ? OG ? B SER 197 OG 46 1 Y 0 H GLU 204 ? CG ? B GLU 198 CG 47 1 Y 0 H GLU 204 ? CD ? B GLU 198 CD 48 1 Y 0 H GLU 204 ? OE1 ? B GLU 198 OE1 49 1 Y 0 H GLU 204 ? OE2 ? B GLU 198 OE2 50 1 Y 0 H THR 205 ? OG1 ? B THR 199 OG1 51 1 Y 0 H THR 205 ? CG2 ? B THR 199 CG2 52 1 Y 0 H THR 207 ? OG1 ? B THR 201 OG1 53 1 Y 0 H THR 207 ? CG2 ? B THR 201 CG2 54 1 Y 0 H ASN 209 ? CG ? B ASN 203 CG 55 1 Y 0 H ASN 209 ? OD1 ? B ASN 203 OD1 56 1 Y 0 H ASN 209 ? ND2 ? B ASN 203 ND2 57 1 Y 0 H SER 215 ? OG ? B SER 209 OG 58 1 Y 0 H SER 216 ? OG ? B SER 210 OG 59 1 Y 0 H THR 217 ? OG1 ? B THR 211 OG1 60 1 Y 0 H THR 217 ? CG2 ? B THR 211 CG2 61 1 Y 0 H ASP 220 ? CG ? B ASP 214 CG 62 1 Y 0 H ASP 220 ? OD1 ? B ASP 214 OD1 63 1 Y 0 H ASP 220 ? OD2 ? B ASP 214 OD2 64 1 Y 0 H LYS 222 ? CG ? B LYS 216 CG 65 1 Y 0 H LYS 222 ? CD ? B LYS 216 CD 66 1 Y 0 H LYS 222 ? CE ? B LYS 216 CE 67 1 Y 0 H LYS 222 ? NZ ? B LYS 216 NZ 68 1 Y 0 H ILE 223 ? CG1 ? B ILE 217 CG1 69 1 Y 0 H ILE 223 ? CG2 ? B ILE 217 CG2 70 1 Y 0 H ILE 223 ? CD1 ? B ILE 217 CD1 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 CNS refinement . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # _cell.entry_id 3VW3 _cell.length_a 68.430 _cell.length_b 68.430 _cell.length_c 243.658 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3VW3 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3VW3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.43 _exptl_crystal.density_percent_sol 49.34 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details ;12% PEG 3350, 0.1M magnesium acetate, 10mM Cobalt hexamine chloride, 0.1M Tris-HCl, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2002-03-01 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.8000 # _reflns.entry_id 3VW3 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 2.5 _reflns.number_obs 20541 _reflns.number_all ? _reflns.percent_possible_obs 97.1 _reflns.pdbx_Rmerge_I_obs 0.054 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 60.7 _reflns.B_iso_Wilson_estimate 49.1 _reflns.pdbx_redundancy 10.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 97.2 _reflns_shell.Rmerge_I_obs 0.240 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 16.0 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3VW3 _refine.ls_number_reflns_obs 20294 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 3.0 _refine.pdbx_data_cutoff_high_absF 573129.69 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.26 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 96.6 _refine.ls_R_factor_obs 0.247 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.247 _refine.ls_R_factor_R_free 0.290 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.8 _refine.ls_number_reflns_R_free 1993 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 54.8 _refine.aniso_B[1][1] -7.77 _refine.aniso_B[2][2] -7.77 _refine.aniso_B[3][3] 15.53 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.3 _refine.solvent_model_param_bsol 48.1259 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model 'PDB entry 1KEG' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3VW3 _refine_analyze.Luzzati_coordinate_error_obs 0.35 _refine_analyze.Luzzati_sigma_a_obs 0.26 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.44 _refine_analyze.Luzzati_sigma_a_free 0.44 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3307 _refine_hist.pdbx_number_atoms_nucleic_acid 732 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 144 _refine_hist.number_atoms_total 4190 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 28.26 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id c_bond_d 0.009 ? ? ? ? 'X-RAY DIFFRACTION' c_bond_d_na ? ? ? ? ? 'X-RAY DIFFRACTION' c_bond_d_prot ? ? ? ? ? 'X-RAY DIFFRACTION' c_angle_d ? ? ? ? ? 'X-RAY DIFFRACTION' c_angle_d_na ? ? ? ? ? 'X-RAY DIFFRACTION' c_angle_d_prot ? ? ? ? ? 'X-RAY DIFFRACTION' c_angle_deg 1.4 ? ? ? ? 'X-RAY DIFFRACTION' c_angle_deg_na ? ? ? ? ? 'X-RAY DIFFRACTION' c_angle_deg_prot ? ? ? ? ? 'X-RAY DIFFRACTION' c_dihedral_angle_d 25.6 ? ? ? ? 'X-RAY DIFFRACTION' c_dihedral_angle_d_na ? ? ? ? ? 'X-RAY DIFFRACTION' c_dihedral_angle_d_prot ? ? ? ? ? 'X-RAY DIFFRACTION' c_improper_angle_d 1.12 ? ? ? ? 'X-RAY DIFFRACTION' c_improper_angle_d_na ? ? ? ? ? 'X-RAY DIFFRACTION' c_improper_angle_d_prot ? ? ? ? ? 'X-RAY DIFFRACTION' c_mcbond_it 4.86 1.50 ? ? ? 'X-RAY DIFFRACTION' c_mcangle_it 7.01 2.00 ? ? ? 'X-RAY DIFFRACTION' c_scbond_it 7.02 2.00 ? ? ? 'X-RAY DIFFRACTION' c_scangle_it 9.40 2.50 ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.50 _refine_ls_shell.d_res_low 2.66 _refine_ls_shell.number_reflns_R_work 2916 _refine_ls_shell.R_factor_R_work 0.324 _refine_ls_shell.percent_reflns_obs 95.1 _refine_ls_shell.R_factor_R_free 0.421 _refine_ls_shell.R_factor_R_free_error 0.023 _refine_ls_shell.percent_reflns_R_free 9.9 _refine_ls_shell.number_reflns_R_free 322 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' 3 t64b.param t64b.top 'X-RAY DIFFRACTION' 4 water_rep.param water.top 'X-RAY DIFFRACTION' 5 nco_xplor_par.txt nco_xplor_top.txt # _database_PDB_matrix.entry_id 3VW3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3VW3 _struct.title 'Antibody 64M-5 Fab in complex with a double-stranded DNA (6-4) photoproduct' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3VW3 _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM/DNA' _struct_keywords.text 'Protein-DNA complex, DNA (6-4) photoproduct, Immunoglobulin, IMMUNE SYSTEM-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? I N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 PDB 3VW3 3VW3 1 ? ? ? 2 PDB 3VW3 3VW3 2 ? ? ? 3 PDB 3VW3 3VW3 3 ? ? ? 4 PDB 3VW3 3VW3 4 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3VW3 L 1 ? 217 ? 3VW3 1 ? 213 ? 1 213 2 2 3VW3 H 1 ? 220 ? 3VW3 1 ? 228 ? 1 228 3 3 3VW3 A 1 ? 18 ? 3VW3 1 ? 18 ? 1 18 4 4 3VW3 B 1 ? 18 ? 3VW3 1 ? 18 ? 1 18 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8000 ? 1 MORE -18 ? 1 'SSA (A^2)' 25090 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 84 ? LEU A 88 ? GLU L 79 LEU L 83 5 ? 5 HELX_P HELX_P2 2 SER A 125 ? SER A 131 ? SER L 121 SER L 127 1 ? 7 HELX_P HELX_P3 3 LYS A 187 ? HIS A 193 ? LYS L 183 HIS L 189 1 ? 7 HELX_P HELX_P4 4 THR B 28 ? TYR B 32 ? THR H 28 TYR H 32 5 ? 5 HELX_P HELX_P5 5 GLN B 62 ? LYS B 65 ? GLN H 61 LYS H 64 5 ? 4 HELX_P HELX_P6 6 THR B 74 ? THR B 76 ? THR H 73 THR H 75 5 ? 3 HELX_P HELX_P7 7 THR B 87 ? SER B 91 ? THR H 83 SER H 87 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 93 SG ? ? L CYS 23 L CYS 88 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf2 disulf ? ? A CYS 138 SG ? ? ? 1_555 A CYS 198 SG ? ? L CYS 134 L CYS 194 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? H CYS 22 H CYS 92 1_555 ? ? ? ? ? ? ? 2.043 ? ? disulf4 disulf ? ? B CYS 147 SG ? ? ? 1_555 B CYS 202 SG ? ? H CYS 142 H CYS 208 1_555 ? ? ? ? ? ? ? 2.034 ? ? covale1 covale both ? C DA 8 "O3'" ? ? ? 1_555 C 64T 9 P ? ? A DA 8 A 64T 9 1_555 ? ? ? ? ? ? ? 1.595 ? ? covale2 covale both ? C 64T 9 "O3'" ? ? ? 1_555 C 5PY 10 P ? ? A 64T 9 A 5PY 10 1_555 ? ? ? ? ? ? ? 1.598 ? ? covale3 covale none ? C 64T 9 C6 ? ? ? 1_555 C 5PY 10 C4 ? ? A 64T 9 A 5PY 10 1_555 ? ? ? ? ? ? ? 1.527 ? ? covale4 covale both ? C 5PY 10 "O3'" ? ? ? 1_555 C DA 11 P ? ? A 5PY 10 A DA 11 1_555 ? ? ? ? ? ? ? 1.605 ? ? hydrog1 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 18 N1 ? ? A DC 2 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 18 O6 ? ? A DC 2 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 18 N2 ? ? A DC 2 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 17 N3 ? ? A DG 3 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 17 O2 ? ? A DG 3 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 17 N4 ? ? A DG 3 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 16 N3 ? ? A DA 4 B DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 16 O4 ? ? A DA 4 B DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 15 N3 ? ? A DG 5 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DG 5 N2 ? ? ? 1_555 D DC 15 O2 ? ? A DG 5 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DC 15 N4 ? ? A DG 5 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 14 N1 ? ? A DT 6 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 14 N6 ? ? A DT 6 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DC 13 N3 ? ? A DG 7 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DC 13 O2 ? ? A DG 7 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D DC 13 N4 ? ? A DG 7 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DT 12 N3 ? ? ? 1_555 D DA 8 N1 ? ? A DT 12 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DT 12 O4 ? ? ? 1_555 D DA 8 N6 ? ? A DT 12 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DG 13 N1 ? ? ? 1_555 D DC 7 N3 ? ? A DG 13 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DG 13 N2 ? ? ? 1_555 D DC 7 O2 ? ? A DG 13 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DG 13 O6 ? ? ? 1_555 D DC 7 N4 ? ? A DG 13 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DG 14 N1 ? ? ? 1_555 D DC 6 N3 ? ? A DG 14 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 14 N2 ? ? ? 1_555 D DC 6 O2 ? ? A DG 14 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 14 O6 ? ? ? 1_555 D DC 6 N4 ? ? A DG 14 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DA 15 N1 ? ? ? 1_555 D DT 5 N3 ? ? A DA 15 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DA 15 N6 ? ? ? 1_555 D DT 5 O4 ? ? A DA 15 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DC 16 N3 ? ? ? 1_555 D DG 4 N1 ? ? A DC 16 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DC 16 N4 ? ? ? 1_555 D DG 4 O6 ? ? A DC 16 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DC 16 O2 ? ? ? 1_555 D DG 4 N2 ? ? A DC 16 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DG 17 N1 ? ? ? 1_555 D DC 3 N3 ? ? A DG 17 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DG 17 N2 ? ? ? 1_555 D DC 3 O2 ? ? A DG 17 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DG 17 O6 ? ? ? 1_555 D DC 3 N4 ? ? A DG 17 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DG 18 N1 ? ? ? 1_555 D DC 2 N3 ? ? A DG 18 B DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DG 18 N2 ? ? ? 1_555 D DC 2 O2 ? ? A DG 18 B DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 18 O6 ? ? ? 1_555 D DC 2 N4 ? ? A DG 18 B DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? hydrog ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 23 ? CYS A 93 ? CYS L 23 ? 1_555 CYS L 88 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 138 ? CYS A 198 ? CYS L 134 ? 1_555 CYS L 194 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS B 22 ? CYS B 96 ? CYS H 22 ? 1_555 CYS H 92 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 147 ? CYS B 202 ? CYS H 142 ? 1_555 CYS H 208 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 7 A . ? THR 7 L PRO 8 A ? PRO 8 L 1 -0.40 2 TYR 144 A . ? TYR 140 L PRO 145 A ? PRO 141 L 1 0.09 3 PHE 153 B . ? PHE 148 H PRO 154 B ? PRO 149 H 1 -0.35 4 GLU 155 B . ? GLU 150 H PRO 156 B ? PRO 151 H 1 -0.31 5 TRP 195 B . ? TRP 200 H PRO 196 B ? PRO 202 H 1 -0.67 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? G ? 6 ? H ? 4 ? I ? 4 ? J ? 4 ? K ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel G 4 5 ? anti-parallel G 5 6 ? anti-parallel H 1 2 ? parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel I 1 2 ? anti-parallel I 2 3 ? anti-parallel I 3 4 ? anti-parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel J 3 4 ? anti-parallel K 1 2 ? anti-parallel K 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 4 ? THR A 7 ? MET L 4 THR L 7 A 2 ALA A 19 ? SER A 25 ? ALA L 19 SER L 25 A 3 ASP A 75 ? ILE A 80 ? ASP L 70 ILE L 75 A 4 PHE A 67 ? SER A 72 ? PHE L 62 SER L 67 B 1 SER A 10 ? VAL A 13 ? SER L 10 VAL L 13 B 2 THR A 106 ? ILE A 110 ? THR L 102 ILE L 106 B 3 GLY A 89 ? ARG A 95 ? GLY L 84 ARG L 90 B 4 LEU A 38 ? GLN A 43 ? LEU L 33 GLN L 38 B 5 LYS A 50 ? TYR A 54 ? LYS L 45 TYR L 49 B 6 ASN A 58 ? ARG A 59 ? ASN L 53 ARG L 54 C 1 SER A 10 ? VAL A 13 ? SER L 10 VAL L 13 C 2 THR A 106 ? ILE A 110 ? THR L 102 ILE L 106 C 3 GLY A 89 ? ARG A 95 ? GLY L 84 ARG L 90 C 4 THR A 101 ? PHE A 102 ? THR L 97 PHE L 98 D 1 THR A 118 ? PHE A 122 ? THR L 114 PHE L 118 D 2 GLY A 133 ? PHE A 143 ? GLY L 129 PHE L 139 D 3 TYR A 177 ? THR A 186 ? TYR L 173 THR L 182 D 4 VAL A 163 ? THR A 168 ? VAL L 159 THR L 164 E 1 SER A 157 ? ARG A 159 ? SER L 153 ARG L 155 E 2 ILE A 148 ? ILE A 154 ? ILE L 144 ILE L 150 E 3 SER A 195 ? HIS A 202 ? SER L 191 HIS L 198 E 4 ILE A 209 ? ASN A 214 ? ILE L 205 ASN L 210 F 1 GLN B 3 ? GLN B 6 ? GLN H 3 GLN H 6 F 2 VAL B 18 ? SER B 25 ? VAL H 18 SER H 25 F 3 THR B 78 ? LEU B 83 ? THR H 77 LEU H 82 F 4 ALA B 68 ? VAL B 73 ? ALA H 67 VAL H 72 G 1 VAL B 10 ? ALA B 12 ? VAL H 10 ALA H 12 G 2 THR B 114 ? VAL B 118 ? THR H 107 VAL H 111 G 3 ALA B 92 ? ASN B 100 ? ALA H 88 ASN H 96 G 4 MET B 34 ? GLN B 39 ? MET H 34 GLN H 39 G 5 GLU B 46 ? ILE B 51 ? GLU H 46 ILE H 51 G 6 THR B 58 ? TYR B 60 ? THR H 57 TYR H 59 H 1 VAL B 10 ? ALA B 12 ? VAL H 10 ALA H 12 H 2 THR B 114 ? VAL B 118 ? THR H 107 VAL H 111 H 3 ALA B 92 ? ASN B 100 ? ALA H 88 ASN H 96 H 4 ALA B 106 J TRP B 110 ? ALA H 100 TRP H 103 I 1 TYR B 129 ? LEU B 131 ? TYR H 122 LEU H 124 I 2 LEU B 145 ? TYR B 152 ? LEU H 140 TYR H 147 I 3 TYR B 182 ? VAL B 188 ? TYR H 185 VAL H 191 I 4 VAL B 170 ? THR B 172 ? VAL H 171 THR H 173 J 1 TYR B 129 ? LEU B 131 ? TYR H 122 LEU H 124 J 2 LEU B 145 ? TYR B 152 ? LEU H 140 TYR H 147 J 3 TYR B 182 ? VAL B 188 ? TYR H 185 VAL H 191 J 4 VAL B 176 ? LEU B 177 ? VAL H 177 LEU H 178 K 1 THR B 158 ? TRP B 161 ? THR H 153 TRP H 157 K 2 THR B 201 ? HIS B 206 ? THR H 207 HIS H 212 K 3 THR B 211 ? LYS B 216 ? THR H 217 LYS H 222 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 7 ? N THR L 7 O SER A 22 ? O SER L 22 A 2 3 N CYS A 23 ? N CYS L 23 O PHE A 76 ? O PHE L 71 A 3 4 O THR A 77 ? O THR L 72 N SER A 70 ? N SER L 65 B 1 2 N LEU A 11 ? N LEU L 11 O LYS A 107 ? O LYS L 103 B 2 3 O LEU A 108 ? O LEU L 104 N GLY A 89 ? N GLY L 84 B 3 4 O PHE A 94 ? O PHE L 89 N GLU A 39 ? N GLU L 34 B 4 5 N LEU A 42 ? N LEU L 37 O LYS A 50 ? O LYS L 45 B 5 6 N TYR A 54 ? N TYR L 49 O ASN A 58 ? O ASN L 53 C 1 2 N LEU A 11 ? N LEU L 11 O LYS A 107 ? O LYS L 103 C 2 3 O LEU A 108 ? O LEU L 104 N GLY A 89 ? N GLY L 84 C 3 4 N ARG A 95 ? N ARG L 90 O THR A 101 ? O THR L 97 D 1 2 N PHE A 122 ? N PHE L 118 O VAL A 137 ? O VAL L 133 D 2 3 N VAL A 136 ? N VAL L 132 O LEU A 183 ? O LEU L 179 D 3 4 O THR A 182 ? O THR L 178 N LEU A 164 ? N LEU L 160 E 1 2 O ARG A 159 ? O ARG L 155 N TRP A 152 ? N TRP L 148 E 2 3 N LYS A 151 ? N LYS L 147 O GLU A 199 ? O GLU L 195 E 3 4 N CYS A 198 ? N CYS L 194 O LYS A 211 ? O LYS L 207 F 1 2 N GLN B 5 ? N GLN H 5 O LYS B 23 ? O LYS H 23 F 2 3 N CYS B 22 ? N CYS H 22 O ALA B 79 ? O ALA H 78 F 3 4 O TYR B 80 ? O TYR H 79 N THR B 71 ? N THR H 70 G 1 2 N ALA B 12 ? N ALA H 12 O THR B 117 ? O THR H 110 G 2 3 O VAL B 116 ? O VAL H 109 N ALA B 92 ? N ALA H 88 G 3 4 O TYR B 95 ? O TYR H 91 N ILE B 37 ? N ILE H 37 G 4 5 N MET B 34 ? N MET H 34 O ILE B 51 ? O ILE H 51 G 5 6 N THR B 50 ? N THR H 50 O THR B 59 ? O THR H 58 H 1 2 N ALA B 12 ? N ALA H 12 O THR B 117 ? O THR H 110 H 2 3 O VAL B 116 ? O VAL H 109 N ALA B 92 ? N ALA H 88 H 3 4 N ASN B 100 ? N ASN H 96 O ALA B 106 J O ALA H 100 I 1 2 N LEU B 131 ? N LEU H 124 O GLY B 146 ? O GLY H 141 I 2 3 N VAL B 149 ? N VAL H 144 O LEU B 184 ? O LEU H 187 I 3 4 O SER B 187 ? O SER H 190 N HIS B 171 ? N HIS H 172 J 1 2 N LEU B 131 ? N LEU H 124 O GLY B 146 ? O GLY H 141 J 2 3 N VAL B 149 ? N VAL H 144 O LEU B 184 ? O LEU H 187 J 3 4 O THR B 183 ? O THR H 186 N VAL B 176 ? N VAL H 177 K 1 2 N THR B 158 ? N THR H 153 O ALA B 205 ? O ALA H 211 K 2 3 N CYS B 202 ? N CYS H 208 O LYS B 215 ? O LYS H 221 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id H _struct_site.pdbx_auth_comp_id NCO _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE NCO H 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 DA C 11 ? DA A 11 . ? 1_555 ? 2 AC1 4 ASP B 57 ? ASP H 56 . ? 1_555 ? 3 AC1 4 THR B 58 ? THR H 57 . ? 1_555 ? 4 AC1 4 THR B 59 ? THR H 58 . ? 1_555 ? # _pdbx_entry_details.entry_id 3VW3 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 DC _pdbx_validate_rmsd_angle.auth_seq_id_1 15 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 DC _pdbx_validate_rmsd_angle.auth_seq_id_2 15 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N1 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 DC _pdbx_validate_rmsd_angle.auth_seq_id_3 15 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 110.58 _pdbx_validate_rmsd_angle.angle_target_value 108.30 _pdbx_validate_rmsd_angle.angle_deviation 2.28 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER L 27 E ? -58.73 -2.24 2 1 VAL L 51 ? ? 71.45 -53.08 3 1 ARG L 61 ? ? -66.51 2.97 4 1 HIS L 93 ? ? 62.81 -118.97 5 1 PRO L 113 ? ? -57.96 108.57 6 1 SER L 116 ? ? -160.37 112.62 7 1 ASN L 138 ? ? 45.18 86.80 8 1 ASP L 151 ? ? 70.99 44.43 9 1 ASN L 190 ? ? -135.95 -38.25 10 1 PRO L 204 ? ? -57.00 175.16 11 1 ARG L 211 ? ? -51.99 23.71 12 1 THR H 9 ? ? -37.74 153.14 13 1 ASN H 54 ? ? -142.37 13.89 14 1 SER H 74 ? ? -49.45 -16.88 15 1 ALA H 88 ? ? 173.33 -179.08 16 1 SER H 100 ? ? 178.84 141.56 17 1 ALA H 100 J ? -179.98 -172.16 18 1 SER H 128 ? ? 59.35 71.49 19 1 ALA H 129 ? ? -146.08 -2.84 20 1 PRO H 149 ? ? -103.10 -169.22 21 1 GLN H 179 ? ? -114.96 76.52 22 1 SER H 180 ? ? 68.35 87.33 23 1 ASP H 183 ? ? 60.27 -14.96 24 1 PRO H 227 ? ? -44.45 174.19 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 C 64T 9 A 64T 9 ? DT "5-HYDROXY-THYMIDINE-5'-MONOPHOSPHATE" 2 C 5PY 10 A 5PY 10 ? DT ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 L ASP 1 ? A ASP 1 2 1 Y 1 L GLU 213 ? A GLU 217 3 1 Y 1 H ASN 135 ? B ASN 140 4 1 Y 1 H VAL 193 ? B VAL 190 5 1 Y 1 H PRO 194 ? B PRO 191 6 1 Y 1 H SER 195 ? B SER 192 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5PY P P N N 1 5PY OP2 O N N 2 5PY OP1 O N N 3 5PY "O5'" O N N 4 5PY "C5'" C N N 5 5PY "C4'" C N R 6 5PY "O4'" O N N 7 5PY "C1'" C N R 8 5PY N1 N N N 9 5PY C2 C N N 10 5PY O2 O N N 11 5PY N3 N N N 12 5PY C4 C N N 13 5PY C5 C N N 14 5PY C5M C N N 15 5PY C6 C N N 16 5PY "C2'" C N N 17 5PY "C3'" C N S 18 5PY "O3'" O N N 19 5PY OP3 O N N 20 5PY H71 H N N 21 5PY H72 H N N 22 5PY H73 H N N 23 5PY H4 H N N 24 5PY H6 H N N 25 5PY "H1'" H N N 26 5PY "H2'" H N N 27 5PY "H2''" H N N 28 5PY "H3'" H N N 29 5PY "HO3'" H N N 30 5PY "H4'" H N N 31 5PY "H5'" H N N 32 5PY "H5''" H N N 33 5PY HOP2 H N N 34 5PY HOP3 H N N 35 64T P P N N 36 64T OP1 O N N 37 64T OP2 O N N 38 64T "O5'" O N N 39 64T "C5'" C N N 40 64T "C4'" C N R 41 64T "O4'" O N N 42 64T "C3'" C N S 43 64T "O3'" O N N 44 64T "C2'" C N N 45 64T "C1'" C N R 46 64T N1 N N N 47 64T C2 C N N 48 64T O2 O N N 49 64T N3 N N N 50 64T C4 C N N 51 64T O4 O N N 52 64T C5 C N R 53 64T C5M C N N 54 64T O5 O N N 55 64T C6 C N N 56 64T OP3 O N N 57 64T HOP2 H N N 58 64T "H5'" H N N 59 64T "H5''" H N N 60 64T "H4'" H N N 61 64T "H3'" H N N 62 64T "HO3'" H N N 63 64T "H2'" H N N 64 64T "H2''" H N N 65 64T "H1'" H N N 66 64T H3 H N N 67 64T H71 H N N 68 64T H72 H N N 69 64T H73 H N N 70 64T HO5 H N N 71 64T H61 H N N 72 64T H62 H N N 73 64T HOP3 H N N 74 ALA N N N N 75 ALA CA C N S 76 ALA C C N N 77 ALA O O N N 78 ALA CB C N N 79 ALA OXT O N N 80 ALA H H N N 81 ALA H2 H N N 82 ALA HA H N N 83 ALA HB1 H N N 84 ALA HB2 H N N 85 ALA HB3 H N N 86 ALA HXT H N N 87 ARG N N N N 88 ARG CA C N S 89 ARG C C N N 90 ARG O O N N 91 ARG CB C N N 92 ARG CG C N N 93 ARG CD C N N 94 ARG NE N N N 95 ARG CZ C N N 96 ARG NH1 N N N 97 ARG NH2 N N N 98 ARG OXT O N N 99 ARG H H N N 100 ARG H2 H N N 101 ARG HA H N N 102 ARG HB2 H N N 103 ARG HB3 H N N 104 ARG HG2 H N N 105 ARG HG3 H N N 106 ARG HD2 H N N 107 ARG HD3 H N N 108 ARG HE H N N 109 ARG HH11 H N N 110 ARG HH12 H N N 111 ARG HH21 H N N 112 ARG HH22 H N N 113 ARG HXT H N N 114 ASN N N N N 115 ASN CA C N S 116 ASN C C N N 117 ASN O O N N 118 ASN CB C N N 119 ASN CG C N N 120 ASN OD1 O N N 121 ASN ND2 N N N 122 ASN OXT O N N 123 ASN H H N N 124 ASN H2 H N N 125 ASN HA H N N 126 ASN HB2 H N N 127 ASN HB3 H N N 128 ASN HD21 H N N 129 ASN HD22 H N N 130 ASN HXT H N N 131 ASP N N N N 132 ASP CA C N S 133 ASP C C N N 134 ASP O O N N 135 ASP CB C N N 136 ASP CG C N N 137 ASP OD1 O N N 138 ASP OD2 O N N 139 ASP OXT O N N 140 ASP H H N N 141 ASP H2 H N N 142 ASP HA H N N 143 ASP HB2 H N N 144 ASP HB3 H N N 145 ASP HD2 H N N 146 ASP HXT H N N 147 CYS N N N N 148 CYS CA C N R 149 CYS C C N N 150 CYS O O N N 151 CYS CB C N N 152 CYS SG S N N 153 CYS OXT O N N 154 CYS H H N N 155 CYS H2 H N N 156 CYS HA H N N 157 CYS HB2 H N N 158 CYS HB3 H N N 159 CYS HG H N N 160 CYS HXT H N N 161 DA OP3 O N N 162 DA P P N N 163 DA OP1 O N N 164 DA OP2 O N N 165 DA "O5'" O N N 166 DA "C5'" C N N 167 DA "C4'" C N R 168 DA "O4'" O N N 169 DA "C3'" C N S 170 DA "O3'" O N N 171 DA "C2'" C N N 172 DA "C1'" C N R 173 DA N9 N Y N 174 DA C8 C Y N 175 DA N7 N Y N 176 DA C5 C Y N 177 DA C6 C Y N 178 DA N6 N N N 179 DA N1 N Y N 180 DA C2 C Y N 181 DA N3 N Y N 182 DA C4 C Y N 183 DA HOP3 H N N 184 DA HOP2 H N N 185 DA "H5'" H N N 186 DA "H5''" H N N 187 DA "H4'" H N N 188 DA "H3'" H N N 189 DA "HO3'" H N N 190 DA "H2'" H N N 191 DA "H2''" H N N 192 DA "H1'" H N N 193 DA H8 H N N 194 DA H61 H N N 195 DA H62 H N N 196 DA H2 H N N 197 DC OP3 O N N 198 DC P P N N 199 DC OP1 O N N 200 DC OP2 O N N 201 DC "O5'" O N N 202 DC "C5'" C N N 203 DC "C4'" C N R 204 DC "O4'" O N N 205 DC "C3'" C N S 206 DC "O3'" O N N 207 DC "C2'" C N N 208 DC "C1'" C N R 209 DC N1 N N N 210 DC C2 C N N 211 DC O2 O N N 212 DC N3 N N N 213 DC C4 C N N 214 DC N4 N N N 215 DC C5 C N N 216 DC C6 C N N 217 DC HOP3 H N N 218 DC HOP2 H N N 219 DC "H5'" H N N 220 DC "H5''" H N N 221 DC "H4'" H N N 222 DC "H3'" H N N 223 DC "HO3'" H N N 224 DC "H2'" H N N 225 DC "H2''" H N N 226 DC "H1'" H N N 227 DC H41 H N N 228 DC H42 H N N 229 DC H5 H N N 230 DC H6 H N N 231 DG OP3 O N N 232 DG P P N N 233 DG OP1 O N N 234 DG OP2 O N N 235 DG "O5'" O N N 236 DG "C5'" C N N 237 DG "C4'" C N R 238 DG "O4'" O N N 239 DG "C3'" C N S 240 DG "O3'" O N N 241 DG "C2'" C N N 242 DG "C1'" C N R 243 DG N9 N Y N 244 DG C8 C Y N 245 DG N7 N Y N 246 DG C5 C Y N 247 DG C6 C N N 248 DG O6 O N N 249 DG N1 N N N 250 DG C2 C N N 251 DG N2 N N N 252 DG N3 N N N 253 DG C4 C Y N 254 DG HOP3 H N N 255 DG HOP2 H N N 256 DG "H5'" H N N 257 DG "H5''" H N N 258 DG "H4'" H N N 259 DG "H3'" H N N 260 DG "HO3'" H N N 261 DG "H2'" H N N 262 DG "H2''" H N N 263 DG "H1'" H N N 264 DG H8 H N N 265 DG H1 H N N 266 DG H21 H N N 267 DG H22 H N N 268 DT OP3 O N N 269 DT P P N N 270 DT OP1 O N N 271 DT OP2 O N N 272 DT "O5'" O N N 273 DT "C5'" C N N 274 DT "C4'" C N R 275 DT "O4'" O N N 276 DT "C3'" C N S 277 DT "O3'" O N N 278 DT "C2'" C N N 279 DT "C1'" C N R 280 DT N1 N N N 281 DT C2 C N N 282 DT O2 O N N 283 DT N3 N N N 284 DT C4 C N N 285 DT O4 O N N 286 DT C5 C N N 287 DT C7 C N N 288 DT C6 C N N 289 DT HOP3 H N N 290 DT HOP2 H N N 291 DT "H5'" H N N 292 DT "H5''" H N N 293 DT "H4'" H N N 294 DT "H3'" H N N 295 DT "HO3'" H N N 296 DT "H2'" H N N 297 DT "H2''" H N N 298 DT "H1'" H N N 299 DT H3 H N N 300 DT H71 H N N 301 DT H72 H N N 302 DT H73 H N N 303 DT H6 H N N 304 GLN N N N N 305 GLN CA C N S 306 GLN C C N N 307 GLN O O N N 308 GLN CB C N N 309 GLN CG C N N 310 GLN CD C N N 311 GLN OE1 O N N 312 GLN NE2 N N N 313 GLN OXT O N N 314 GLN H H N N 315 GLN H2 H N N 316 GLN HA H N N 317 GLN HB2 H N N 318 GLN HB3 H N N 319 GLN HG2 H N N 320 GLN HG3 H N N 321 GLN HE21 H N N 322 GLN HE22 H N N 323 GLN HXT H N N 324 GLU N N N N 325 GLU CA C N S 326 GLU C C N N 327 GLU O O N N 328 GLU CB C N N 329 GLU CG C N N 330 GLU CD C N N 331 GLU OE1 O N N 332 GLU OE2 O N N 333 GLU OXT O N N 334 GLU H H N N 335 GLU H2 H N N 336 GLU HA H N N 337 GLU HB2 H N N 338 GLU HB3 H N N 339 GLU HG2 H N N 340 GLU HG3 H N N 341 GLU HE2 H N N 342 GLU HXT H N N 343 GLY N N N N 344 GLY CA C N N 345 GLY C C N N 346 GLY O O N N 347 GLY OXT O N N 348 GLY H H N N 349 GLY H2 H N N 350 GLY HA2 H N N 351 GLY HA3 H N N 352 GLY HXT H N N 353 HIS N N N N 354 HIS CA C N S 355 HIS C C N N 356 HIS O O N N 357 HIS CB C N N 358 HIS CG C Y N 359 HIS ND1 N Y N 360 HIS CD2 C Y N 361 HIS CE1 C Y N 362 HIS NE2 N Y N 363 HIS OXT O N N 364 HIS H H N N 365 HIS H2 H N N 366 HIS HA H N N 367 HIS HB2 H N N 368 HIS HB3 H N N 369 HIS HD1 H N N 370 HIS HD2 H N N 371 HIS HE1 H N N 372 HIS HE2 H N N 373 HIS HXT H N N 374 HOH O O N N 375 HOH H1 H N N 376 HOH H2 H N N 377 ILE N N N N 378 ILE CA C N S 379 ILE C C N N 380 ILE O O N N 381 ILE CB C N S 382 ILE CG1 C N N 383 ILE CG2 C N N 384 ILE CD1 C N N 385 ILE OXT O N N 386 ILE H H N N 387 ILE H2 H N N 388 ILE HA H N N 389 ILE HB H N N 390 ILE HG12 H N N 391 ILE HG13 H N N 392 ILE HG21 H N N 393 ILE HG22 H N N 394 ILE HG23 H N N 395 ILE HD11 H N N 396 ILE HD12 H N N 397 ILE HD13 H N N 398 ILE HXT H N N 399 LEU N N N N 400 LEU CA C N S 401 LEU C C N N 402 LEU O O N N 403 LEU CB C N N 404 LEU CG C N N 405 LEU CD1 C N N 406 LEU CD2 C N N 407 LEU OXT O N N 408 LEU H H N N 409 LEU H2 H N N 410 LEU HA H N N 411 LEU HB2 H N N 412 LEU HB3 H N N 413 LEU HG H N N 414 LEU HD11 H N N 415 LEU HD12 H N N 416 LEU HD13 H N N 417 LEU HD21 H N N 418 LEU HD22 H N N 419 LEU HD23 H N N 420 LEU HXT H N N 421 LYS N N N N 422 LYS CA C N S 423 LYS C C N N 424 LYS O O N N 425 LYS CB C N N 426 LYS CG C N N 427 LYS CD C N N 428 LYS CE C N N 429 LYS NZ N N N 430 LYS OXT O N N 431 LYS H H N N 432 LYS H2 H N N 433 LYS HA H N N 434 LYS HB2 H N N 435 LYS HB3 H N N 436 LYS HG2 H N N 437 LYS HG3 H N N 438 LYS HD2 H N N 439 LYS HD3 H N N 440 LYS HE2 H N N 441 LYS HE3 H N N 442 LYS HZ1 H N N 443 LYS HZ2 H N N 444 LYS HZ3 H N N 445 LYS HXT H N N 446 MET N N N N 447 MET CA C N S 448 MET C C N N 449 MET O O N N 450 MET CB C N N 451 MET CG C N N 452 MET SD S N N 453 MET CE C N N 454 MET OXT O N N 455 MET H H N N 456 MET H2 H N N 457 MET HA H N N 458 MET HB2 H N N 459 MET HB3 H N N 460 MET HG2 H N N 461 MET HG3 H N N 462 MET HE1 H N N 463 MET HE2 H N N 464 MET HE3 H N N 465 MET HXT H N N 466 NCO CO CO N N 467 NCO N1 N N N 468 NCO N2 N N N 469 NCO N3 N N N 470 NCO N4 N N N 471 NCO N5 N N N 472 NCO N6 N N N 473 NCO HN11 H N N 474 NCO HN12 H N N 475 NCO HN13 H N N 476 NCO HN21 H N N 477 NCO HN22 H N N 478 NCO HN23 H N N 479 NCO HN31 H N N 480 NCO HN32 H N N 481 NCO HN33 H N N 482 NCO HN41 H N N 483 NCO HN42 H N N 484 NCO HN43 H N N 485 NCO HN51 H N N 486 NCO HN52 H N N 487 NCO HN53 H N N 488 NCO HN61 H N N 489 NCO HN62 H N N 490 NCO HN63 H N N 491 PHE N N N N 492 PHE CA C N S 493 PHE C C N N 494 PHE O O N N 495 PHE CB C N N 496 PHE CG C Y N 497 PHE CD1 C Y N 498 PHE CD2 C Y N 499 PHE CE1 C Y N 500 PHE CE2 C Y N 501 PHE CZ C Y N 502 PHE OXT O N N 503 PHE H H N N 504 PHE H2 H N N 505 PHE HA H N N 506 PHE HB2 H N N 507 PHE HB3 H N N 508 PHE HD1 H N N 509 PHE HD2 H N N 510 PHE HE1 H N N 511 PHE HE2 H N N 512 PHE HZ H N N 513 PHE HXT H N N 514 PRO N N N N 515 PRO CA C N S 516 PRO C C N N 517 PRO O O N N 518 PRO CB C N N 519 PRO CG C N N 520 PRO CD C N N 521 PRO OXT O N N 522 PRO H H N N 523 PRO HA H N N 524 PRO HB2 H N N 525 PRO HB3 H N N 526 PRO HG2 H N N 527 PRO HG3 H N N 528 PRO HD2 H N N 529 PRO HD3 H N N 530 PRO HXT H N N 531 SER N N N N 532 SER CA C N S 533 SER C C N N 534 SER O O N N 535 SER CB C N N 536 SER OG O N N 537 SER OXT O N N 538 SER H H N N 539 SER H2 H N N 540 SER HA H N N 541 SER HB2 H N N 542 SER HB3 H N N 543 SER HG H N N 544 SER HXT H N N 545 THR N N N N 546 THR CA C N S 547 THR C C N N 548 THR O O N N 549 THR CB C N R 550 THR OG1 O N N 551 THR CG2 C N N 552 THR OXT O N N 553 THR H H N N 554 THR H2 H N N 555 THR HA H N N 556 THR HB H N N 557 THR HG1 H N N 558 THR HG21 H N N 559 THR HG22 H N N 560 THR HG23 H N N 561 THR HXT H N N 562 TRP N N N N 563 TRP CA C N S 564 TRP C C N N 565 TRP O O N N 566 TRP CB C N N 567 TRP CG C Y N 568 TRP CD1 C Y N 569 TRP CD2 C Y N 570 TRP NE1 N Y N 571 TRP CE2 C Y N 572 TRP CE3 C Y N 573 TRP CZ2 C Y N 574 TRP CZ3 C Y N 575 TRP CH2 C Y N 576 TRP OXT O N N 577 TRP H H N N 578 TRP H2 H N N 579 TRP HA H N N 580 TRP HB2 H N N 581 TRP HB3 H N N 582 TRP HD1 H N N 583 TRP HE1 H N N 584 TRP HE3 H N N 585 TRP HZ2 H N N 586 TRP HZ3 H N N 587 TRP HH2 H N N 588 TRP HXT H N N 589 TYR N N N N 590 TYR CA C N S 591 TYR C C N N 592 TYR O O N N 593 TYR CB C N N 594 TYR CG C Y N 595 TYR CD1 C Y N 596 TYR CD2 C Y N 597 TYR CE1 C Y N 598 TYR CE2 C Y N 599 TYR CZ C Y N 600 TYR OH O N N 601 TYR OXT O N N 602 TYR H H N N 603 TYR H2 H N N 604 TYR HA H N N 605 TYR HB2 H N N 606 TYR HB3 H N N 607 TYR HD1 H N N 608 TYR HD2 H N N 609 TYR HE1 H N N 610 TYR HE2 H N N 611 TYR HH H N N 612 TYR HXT H N N 613 VAL N N N N 614 VAL CA C N S 615 VAL C C N N 616 VAL O O N N 617 VAL CB C N N 618 VAL CG1 C N N 619 VAL CG2 C N N 620 VAL OXT O N N 621 VAL H H N N 622 VAL H2 H N N 623 VAL HA H N N 624 VAL HB H N N 625 VAL HG11 H N N 626 VAL HG12 H N N 627 VAL HG13 H N N 628 VAL HG21 H N N 629 VAL HG22 H N N 630 VAL HG23 H N N 631 VAL HXT H N N 632 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5PY P "O5'" sing N N 1 5PY P OP2 sing N N 2 5PY P OP3 sing N N 3 5PY P OP1 doub N N 4 5PY OP2 HOP2 sing N N 5 5PY "O5'" "C5'" sing N N 6 5PY "C5'" "C4'" sing N N 7 5PY "C5'" "H5'" sing N N 8 5PY "C5'" "H5''" sing N N 9 5PY "C4'" "C3'" sing N N 10 5PY "C4'" "O4'" sing N N 11 5PY "C4'" "H4'" sing N N 12 5PY "O4'" "C1'" sing N N 13 5PY "C1'" N1 sing N N 14 5PY "C1'" "C2'" sing N N 15 5PY "C1'" "H1'" sing N N 16 5PY N1 C2 sing N N 17 5PY N1 C6 sing N N 18 5PY C2 N3 sing N N 19 5PY C2 O2 doub N N 20 5PY N3 C4 doub N N 21 5PY C4 C5 sing N N 22 5PY C4 H4 sing N N 23 5PY C5 C5M sing N N 24 5PY C5 C6 doub N N 25 5PY C5M H71 sing N N 26 5PY C5M H72 sing N N 27 5PY C5M H73 sing N N 28 5PY C6 H6 sing N N 29 5PY "C2'" "C3'" sing N N 30 5PY "C2'" "H2'" sing N N 31 5PY "C2'" "H2''" sing N N 32 5PY "C3'" "O3'" sing N N 33 5PY "C3'" "H3'" sing N N 34 5PY "O3'" "HO3'" sing N N 35 5PY OP3 HOP3 sing N N 36 64T P OP1 doub N N 37 64T P OP2 sing N N 38 64T P "O5'" sing N N 39 64T P OP3 sing N N 40 64T OP2 HOP2 sing N N 41 64T "O5'" "C5'" sing N N 42 64T "C5'" "C4'" sing N N 43 64T "C5'" "H5'" sing N N 44 64T "C5'" "H5''" sing N N 45 64T "C4'" "O4'" sing N N 46 64T "C4'" "C3'" sing N N 47 64T "C4'" "H4'" sing N N 48 64T "O4'" "C1'" sing N N 49 64T "C3'" "O3'" sing N N 50 64T "C3'" "C2'" sing N N 51 64T "C3'" "H3'" sing N N 52 64T "O3'" "HO3'" sing N N 53 64T "C2'" "C1'" sing N N 54 64T "C2'" "H2'" sing N N 55 64T "C2'" "H2''" sing N N 56 64T "C1'" N1 sing N N 57 64T "C1'" "H1'" sing N N 58 64T N1 C2 sing N N 59 64T N1 C6 sing N N 60 64T C2 O2 doub N N 61 64T C2 N3 sing N N 62 64T N3 C4 sing N N 63 64T N3 H3 sing N N 64 64T C4 O4 doub N N 65 64T C4 C5 sing N N 66 64T C5 C5M sing N N 67 64T C5 O5 sing N N 68 64T C5 C6 sing N N 69 64T C5M H71 sing N N 70 64T C5M H72 sing N N 71 64T C5M H73 sing N N 72 64T O5 HO5 sing N N 73 64T C6 H61 sing N N 74 64T C6 H62 sing N N 75 64T OP3 HOP3 sing N N 76 ALA N CA sing N N 77 ALA N H sing N N 78 ALA N H2 sing N N 79 ALA CA C sing N N 80 ALA CA CB sing N N 81 ALA CA HA sing N N 82 ALA C O doub N N 83 ALA C OXT sing N N 84 ALA CB HB1 sing N N 85 ALA CB HB2 sing N N 86 ALA CB HB3 sing N N 87 ALA OXT HXT sing N N 88 ARG N CA sing N N 89 ARG N H sing N N 90 ARG N H2 sing N N 91 ARG CA C sing N N 92 ARG CA CB sing N N 93 ARG CA HA sing N N 94 ARG C O doub N N 95 ARG C OXT sing N N 96 ARG CB CG sing N N 97 ARG CB HB2 sing N N 98 ARG CB HB3 sing N N 99 ARG CG CD sing N N 100 ARG CG HG2 sing N N 101 ARG CG HG3 sing N N 102 ARG CD NE sing N N 103 ARG CD HD2 sing N N 104 ARG CD HD3 sing N N 105 ARG NE CZ sing N N 106 ARG NE HE sing N N 107 ARG CZ NH1 sing N N 108 ARG CZ NH2 doub N N 109 ARG NH1 HH11 sing N N 110 ARG NH1 HH12 sing N N 111 ARG NH2 HH21 sing N N 112 ARG NH2 HH22 sing N N 113 ARG OXT HXT sing N N 114 ASN N CA sing N N 115 ASN N H sing N N 116 ASN N H2 sing N N 117 ASN CA C sing N N 118 ASN CA CB sing N N 119 ASN CA HA sing N N 120 ASN C O doub N N 121 ASN C OXT sing N N 122 ASN CB CG sing N N 123 ASN CB HB2 sing N N 124 ASN CB HB3 sing N N 125 ASN CG OD1 doub N N 126 ASN CG ND2 sing N N 127 ASN ND2 HD21 sing N N 128 ASN ND2 HD22 sing N N 129 ASN OXT HXT sing N N 130 ASP N CA sing N N 131 ASP N H sing N N 132 ASP N H2 sing N N 133 ASP CA C sing N N 134 ASP CA CB sing N N 135 ASP CA HA sing N N 136 ASP C O doub N N 137 ASP C OXT sing N N 138 ASP CB CG sing N N 139 ASP CB HB2 sing N N 140 ASP CB HB3 sing N N 141 ASP CG OD1 doub N N 142 ASP CG OD2 sing N N 143 ASP OD2 HD2 sing N N 144 ASP OXT HXT sing N N 145 CYS N CA sing N N 146 CYS N H sing N N 147 CYS N H2 sing N N 148 CYS CA C sing N N 149 CYS CA CB sing N N 150 CYS CA HA sing N N 151 CYS C O doub N N 152 CYS C OXT sing N N 153 CYS CB SG sing N N 154 CYS CB HB2 sing N N 155 CYS CB HB3 sing N N 156 CYS SG HG sing N N 157 CYS OXT HXT sing N N 158 DA OP3 P sing N N 159 DA OP3 HOP3 sing N N 160 DA P OP1 doub N N 161 DA P OP2 sing N N 162 DA P "O5'" sing N N 163 DA OP2 HOP2 sing N N 164 DA "O5'" "C5'" sing N N 165 DA "C5'" "C4'" sing N N 166 DA "C5'" "H5'" sing N N 167 DA "C5'" "H5''" sing N N 168 DA "C4'" "O4'" sing N N 169 DA "C4'" "C3'" sing N N 170 DA "C4'" "H4'" sing N N 171 DA "O4'" "C1'" sing N N 172 DA "C3'" "O3'" sing N N 173 DA "C3'" "C2'" sing N N 174 DA "C3'" "H3'" sing N N 175 DA "O3'" "HO3'" sing N N 176 DA "C2'" "C1'" sing N N 177 DA "C2'" "H2'" sing N N 178 DA "C2'" "H2''" sing N N 179 DA "C1'" N9 sing N N 180 DA "C1'" "H1'" sing N N 181 DA N9 C8 sing Y N 182 DA N9 C4 sing Y N 183 DA C8 N7 doub Y N 184 DA C8 H8 sing N N 185 DA N7 C5 sing Y N 186 DA C5 C6 sing Y N 187 DA C5 C4 doub Y N 188 DA C6 N6 sing N N 189 DA C6 N1 doub Y N 190 DA N6 H61 sing N N 191 DA N6 H62 sing N N 192 DA N1 C2 sing Y N 193 DA C2 N3 doub Y N 194 DA C2 H2 sing N N 195 DA N3 C4 sing Y N 196 DC OP3 P sing N N 197 DC OP3 HOP3 sing N N 198 DC P OP1 doub N N 199 DC P OP2 sing N N 200 DC P "O5'" sing N N 201 DC OP2 HOP2 sing N N 202 DC "O5'" "C5'" sing N N 203 DC "C5'" "C4'" sing N N 204 DC "C5'" "H5'" sing N N 205 DC "C5'" "H5''" sing N N 206 DC "C4'" "O4'" sing N N 207 DC "C4'" "C3'" sing N N 208 DC "C4'" "H4'" sing N N 209 DC "O4'" "C1'" sing N N 210 DC "C3'" "O3'" sing N N 211 DC "C3'" "C2'" sing N N 212 DC "C3'" "H3'" sing N N 213 DC "O3'" "HO3'" sing N N 214 DC "C2'" "C1'" sing N N 215 DC "C2'" "H2'" sing N N 216 DC "C2'" "H2''" sing N N 217 DC "C1'" N1 sing N N 218 DC "C1'" "H1'" sing N N 219 DC N1 C2 sing N N 220 DC N1 C6 sing N N 221 DC C2 O2 doub N N 222 DC C2 N3 sing N N 223 DC N3 C4 doub N N 224 DC C4 N4 sing N N 225 DC C4 C5 sing N N 226 DC N4 H41 sing N N 227 DC N4 H42 sing N N 228 DC C5 C6 doub N N 229 DC C5 H5 sing N N 230 DC C6 H6 sing N N 231 DG OP3 P sing N N 232 DG OP3 HOP3 sing N N 233 DG P OP1 doub N N 234 DG P OP2 sing N N 235 DG P "O5'" sing N N 236 DG OP2 HOP2 sing N N 237 DG "O5'" "C5'" sing N N 238 DG "C5'" "C4'" sing N N 239 DG "C5'" "H5'" sing N N 240 DG "C5'" "H5''" sing N N 241 DG "C4'" "O4'" sing N N 242 DG "C4'" "C3'" sing N N 243 DG "C4'" "H4'" sing N N 244 DG "O4'" "C1'" sing N N 245 DG "C3'" "O3'" sing N N 246 DG "C3'" "C2'" sing N N 247 DG "C3'" "H3'" sing N N 248 DG "O3'" "HO3'" sing N N 249 DG "C2'" "C1'" sing N N 250 DG "C2'" "H2'" sing N N 251 DG "C2'" "H2''" sing N N 252 DG "C1'" N9 sing N N 253 DG "C1'" "H1'" sing N N 254 DG N9 C8 sing Y N 255 DG N9 C4 sing Y N 256 DG C8 N7 doub Y N 257 DG C8 H8 sing N N 258 DG N7 C5 sing Y N 259 DG C5 C6 sing N N 260 DG C5 C4 doub Y N 261 DG C6 O6 doub N N 262 DG C6 N1 sing N N 263 DG N1 C2 sing N N 264 DG N1 H1 sing N N 265 DG C2 N2 sing N N 266 DG C2 N3 doub N N 267 DG N2 H21 sing N N 268 DG N2 H22 sing N N 269 DG N3 C4 sing N N 270 DT OP3 P sing N N 271 DT OP3 HOP3 sing N N 272 DT P OP1 doub N N 273 DT P OP2 sing N N 274 DT P "O5'" sing N N 275 DT OP2 HOP2 sing N N 276 DT "O5'" "C5'" sing N N 277 DT "C5'" "C4'" sing N N 278 DT "C5'" "H5'" sing N N 279 DT "C5'" "H5''" sing N N 280 DT "C4'" "O4'" sing N N 281 DT "C4'" "C3'" sing N N 282 DT "C4'" "H4'" sing N N 283 DT "O4'" "C1'" sing N N 284 DT "C3'" "O3'" sing N N 285 DT "C3'" "C2'" sing N N 286 DT "C3'" "H3'" sing N N 287 DT "O3'" "HO3'" sing N N 288 DT "C2'" "C1'" sing N N 289 DT "C2'" "H2'" sing N N 290 DT "C2'" "H2''" sing N N 291 DT "C1'" N1 sing N N 292 DT "C1'" "H1'" sing N N 293 DT N1 C2 sing N N 294 DT N1 C6 sing N N 295 DT C2 O2 doub N N 296 DT C2 N3 sing N N 297 DT N3 C4 sing N N 298 DT N3 H3 sing N N 299 DT C4 O4 doub N N 300 DT C4 C5 sing N N 301 DT C5 C7 sing N N 302 DT C5 C6 doub N N 303 DT C7 H71 sing N N 304 DT C7 H72 sing N N 305 DT C7 H73 sing N N 306 DT C6 H6 sing N N 307 GLN N CA sing N N 308 GLN N H sing N N 309 GLN N H2 sing N N 310 GLN CA C sing N N 311 GLN CA CB sing N N 312 GLN CA HA sing N N 313 GLN C O doub N N 314 GLN C OXT sing N N 315 GLN CB CG sing N N 316 GLN CB HB2 sing N N 317 GLN CB HB3 sing N N 318 GLN CG CD sing N N 319 GLN CG HG2 sing N N 320 GLN CG HG3 sing N N 321 GLN CD OE1 doub N N 322 GLN CD NE2 sing N N 323 GLN NE2 HE21 sing N N 324 GLN NE2 HE22 sing N N 325 GLN OXT HXT sing N N 326 GLU N CA sing N N 327 GLU N H sing N N 328 GLU N H2 sing N N 329 GLU CA C sing N N 330 GLU CA CB sing N N 331 GLU CA HA sing N N 332 GLU C O doub N N 333 GLU C OXT sing N N 334 GLU CB CG sing N N 335 GLU CB HB2 sing N N 336 GLU CB HB3 sing N N 337 GLU CG CD sing N N 338 GLU CG HG2 sing N N 339 GLU CG HG3 sing N N 340 GLU CD OE1 doub N N 341 GLU CD OE2 sing N N 342 GLU OE2 HE2 sing N N 343 GLU OXT HXT sing N N 344 GLY N CA sing N N 345 GLY N H sing N N 346 GLY N H2 sing N N 347 GLY CA C sing N N 348 GLY CA HA2 sing N N 349 GLY CA HA3 sing N N 350 GLY C O doub N N 351 GLY C OXT sing N N 352 GLY OXT HXT sing N N 353 HIS N CA sing N N 354 HIS N H sing N N 355 HIS N H2 sing N N 356 HIS CA C sing N N 357 HIS CA CB sing N N 358 HIS CA HA sing N N 359 HIS C O doub N N 360 HIS C OXT sing N N 361 HIS CB CG sing N N 362 HIS CB HB2 sing N N 363 HIS CB HB3 sing N N 364 HIS CG ND1 sing Y N 365 HIS CG CD2 doub Y N 366 HIS ND1 CE1 doub Y N 367 HIS ND1 HD1 sing N N 368 HIS CD2 NE2 sing Y N 369 HIS CD2 HD2 sing N N 370 HIS CE1 NE2 sing Y N 371 HIS CE1 HE1 sing N N 372 HIS NE2 HE2 sing N N 373 HIS OXT HXT sing N N 374 HOH O H1 sing N N 375 HOH O H2 sing N N 376 ILE N CA sing N N 377 ILE N H sing N N 378 ILE N H2 sing N N 379 ILE CA C sing N N 380 ILE CA CB sing N N 381 ILE CA HA sing N N 382 ILE C O doub N N 383 ILE C OXT sing N N 384 ILE CB CG1 sing N N 385 ILE CB CG2 sing N N 386 ILE CB HB sing N N 387 ILE CG1 CD1 sing N N 388 ILE CG1 HG12 sing N N 389 ILE CG1 HG13 sing N N 390 ILE CG2 HG21 sing N N 391 ILE CG2 HG22 sing N N 392 ILE CG2 HG23 sing N N 393 ILE CD1 HD11 sing N N 394 ILE CD1 HD12 sing N N 395 ILE CD1 HD13 sing N N 396 ILE OXT HXT sing N N 397 LEU N CA sing N N 398 LEU N H sing N N 399 LEU N H2 sing N N 400 LEU CA C sing N N 401 LEU CA CB sing N N 402 LEU CA HA sing N N 403 LEU C O doub N N 404 LEU C OXT sing N N 405 LEU CB CG sing N N 406 LEU CB HB2 sing N N 407 LEU CB HB3 sing N N 408 LEU CG CD1 sing N N 409 LEU CG CD2 sing N N 410 LEU CG HG sing N N 411 LEU CD1 HD11 sing N N 412 LEU CD1 HD12 sing N N 413 LEU CD1 HD13 sing N N 414 LEU CD2 HD21 sing N N 415 LEU CD2 HD22 sing N N 416 LEU CD2 HD23 sing N N 417 LEU OXT HXT sing N N 418 LYS N CA sing N N 419 LYS N H sing N N 420 LYS N H2 sing N N 421 LYS CA C sing N N 422 LYS CA CB sing N N 423 LYS CA HA sing N N 424 LYS C O doub N N 425 LYS C OXT sing N N 426 LYS CB CG sing N N 427 LYS CB HB2 sing N N 428 LYS CB HB3 sing N N 429 LYS CG CD sing N N 430 LYS CG HG2 sing N N 431 LYS CG HG3 sing N N 432 LYS CD CE sing N N 433 LYS CD HD2 sing N N 434 LYS CD HD3 sing N N 435 LYS CE NZ sing N N 436 LYS CE HE2 sing N N 437 LYS CE HE3 sing N N 438 LYS NZ HZ1 sing N N 439 LYS NZ HZ2 sing N N 440 LYS NZ HZ3 sing N N 441 LYS OXT HXT sing N N 442 MET N CA sing N N 443 MET N H sing N N 444 MET N H2 sing N N 445 MET CA C sing N N 446 MET CA CB sing N N 447 MET CA HA sing N N 448 MET C O doub N N 449 MET C OXT sing N N 450 MET CB CG sing N N 451 MET CB HB2 sing N N 452 MET CB HB3 sing N N 453 MET CG SD sing N N 454 MET CG HG2 sing N N 455 MET CG HG3 sing N N 456 MET SD CE sing N N 457 MET CE HE1 sing N N 458 MET CE HE2 sing N N 459 MET CE HE3 sing N N 460 MET OXT HXT sing N N 461 NCO CO N1 sing N N 462 NCO CO N2 sing N N 463 NCO CO N3 sing N N 464 NCO CO N4 sing N N 465 NCO CO N5 sing N N 466 NCO CO N6 sing N N 467 NCO N1 HN11 sing N N 468 NCO N1 HN12 sing N N 469 NCO N1 HN13 sing N N 470 NCO N2 HN21 sing N N 471 NCO N2 HN22 sing N N 472 NCO N2 HN23 sing N N 473 NCO N3 HN31 sing N N 474 NCO N3 HN32 sing N N 475 NCO N3 HN33 sing N N 476 NCO N4 HN41 sing N N 477 NCO N4 HN42 sing N N 478 NCO N4 HN43 sing N N 479 NCO N5 HN51 sing N N 480 NCO N5 HN52 sing N N 481 NCO N5 HN53 sing N N 482 NCO N6 HN61 sing N N 483 NCO N6 HN62 sing N N 484 NCO N6 HN63 sing N N 485 PHE N CA sing N N 486 PHE N H sing N N 487 PHE N H2 sing N N 488 PHE CA C sing N N 489 PHE CA CB sing N N 490 PHE CA HA sing N N 491 PHE C O doub N N 492 PHE C OXT sing N N 493 PHE CB CG sing N N 494 PHE CB HB2 sing N N 495 PHE CB HB3 sing N N 496 PHE CG CD1 doub Y N 497 PHE CG CD2 sing Y N 498 PHE CD1 CE1 sing Y N 499 PHE CD1 HD1 sing N N 500 PHE CD2 CE2 doub Y N 501 PHE CD2 HD2 sing N N 502 PHE CE1 CZ doub Y N 503 PHE CE1 HE1 sing N N 504 PHE CE2 CZ sing Y N 505 PHE CE2 HE2 sing N N 506 PHE CZ HZ sing N N 507 PHE OXT HXT sing N N 508 PRO N CA sing N N 509 PRO N CD sing N N 510 PRO N H sing N N 511 PRO CA C sing N N 512 PRO CA CB sing N N 513 PRO CA HA sing N N 514 PRO C O doub N N 515 PRO C OXT sing N N 516 PRO CB CG sing N N 517 PRO CB HB2 sing N N 518 PRO CB HB3 sing N N 519 PRO CG CD sing N N 520 PRO CG HG2 sing N N 521 PRO CG HG3 sing N N 522 PRO CD HD2 sing N N 523 PRO CD HD3 sing N N 524 PRO OXT HXT sing N N 525 SER N CA sing N N 526 SER N H sing N N 527 SER N H2 sing N N 528 SER CA C sing N N 529 SER CA CB sing N N 530 SER CA HA sing N N 531 SER C O doub N N 532 SER C OXT sing N N 533 SER CB OG sing N N 534 SER CB HB2 sing N N 535 SER CB HB3 sing N N 536 SER OG HG sing N N 537 SER OXT HXT sing N N 538 THR N CA sing N N 539 THR N H sing N N 540 THR N H2 sing N N 541 THR CA C sing N N 542 THR CA CB sing N N 543 THR CA HA sing N N 544 THR C O doub N N 545 THR C OXT sing N N 546 THR CB OG1 sing N N 547 THR CB CG2 sing N N 548 THR CB HB sing N N 549 THR OG1 HG1 sing N N 550 THR CG2 HG21 sing N N 551 THR CG2 HG22 sing N N 552 THR CG2 HG23 sing N N 553 THR OXT HXT sing N N 554 TRP N CA sing N N 555 TRP N H sing N N 556 TRP N H2 sing N N 557 TRP CA C sing N N 558 TRP CA CB sing N N 559 TRP CA HA sing N N 560 TRP C O doub N N 561 TRP C OXT sing N N 562 TRP CB CG sing N N 563 TRP CB HB2 sing N N 564 TRP CB HB3 sing N N 565 TRP CG CD1 doub Y N 566 TRP CG CD2 sing Y N 567 TRP CD1 NE1 sing Y N 568 TRP CD1 HD1 sing N N 569 TRP CD2 CE2 doub Y N 570 TRP CD2 CE3 sing Y N 571 TRP NE1 CE2 sing Y N 572 TRP NE1 HE1 sing N N 573 TRP CE2 CZ2 sing Y N 574 TRP CE3 CZ3 doub Y N 575 TRP CE3 HE3 sing N N 576 TRP CZ2 CH2 doub Y N 577 TRP CZ2 HZ2 sing N N 578 TRP CZ3 CH2 sing Y N 579 TRP CZ3 HZ3 sing N N 580 TRP CH2 HH2 sing N N 581 TRP OXT HXT sing N N 582 TYR N CA sing N N 583 TYR N H sing N N 584 TYR N H2 sing N N 585 TYR CA C sing N N 586 TYR CA CB sing N N 587 TYR CA HA sing N N 588 TYR C O doub N N 589 TYR C OXT sing N N 590 TYR CB CG sing N N 591 TYR CB HB2 sing N N 592 TYR CB HB3 sing N N 593 TYR CG CD1 doub Y N 594 TYR CG CD2 sing Y N 595 TYR CD1 CE1 sing Y N 596 TYR CD1 HD1 sing N N 597 TYR CD2 CE2 doub Y N 598 TYR CD2 HD2 sing N N 599 TYR CE1 CZ doub Y N 600 TYR CE1 HE1 sing N N 601 TYR CE2 CZ sing Y N 602 TYR CE2 HE2 sing N N 603 TYR CZ OH sing N N 604 TYR OH HH sing N N 605 TYR OXT HXT sing N N 606 VAL N CA sing N N 607 VAL N H sing N N 608 VAL N H2 sing N N 609 VAL CA C sing N N 610 VAL CA CB sing N N 611 VAL CA HA sing N N 612 VAL C O doub N N 613 VAL C OXT sing N N 614 VAL CB CG1 sing N N 615 VAL CB CG2 sing N N 616 VAL CB HB sing N N 617 VAL CG1 HG11 sing N N 618 VAL CG1 HG12 sing N N 619 VAL CG1 HG13 sing N N 620 VAL CG2 HG21 sing N N 621 VAL CG2 HG22 sing N N 622 VAL CG2 HG23 sing N N 623 VAL OXT HXT sing N N 624 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3VW3 'b-form double helix' 3VW3 'internal loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DC 2 1_555 D DG 18 1_555 0.503 -0.073 0.194 4.323 -5.719 -1.472 1 A_DC2:DG18_B A 2 ? B 18 ? 19 1 1 C DG 3 1_555 D DC 17 1_555 0.522 -0.007 0.050 11.922 -12.755 -5.604 2 A_DG3:DC17_B A 3 ? B 17 ? 19 1 1 C DA 4 1_555 D DT 16 1_555 0.502 0.196 -0.536 -3.002 -12.717 -17.449 3 A_DA4:DT16_B A 4 ? B 16 ? 20 1 1 C DG 5 1_555 D DC 15 1_555 0.218 -0.026 -0.436 -11.126 -9.072 -3.753 4 A_DG5:DC15_B A 5 ? B 15 ? 19 1 1 C DT 6 1_555 D DA 14 1_555 0.078 -0.116 0.025 -6.602 -6.171 -4.019 5 A_DT6:DA14_B A 6 ? B 14 ? 20 1 1 C DG 7 1_555 D DC 13 1_555 0.273 -0.171 0.508 8.730 -4.723 -4.767 6 A_DG7:DC13_B A 7 ? B 13 ? 19 1 1 C DT 12 1_555 D DA 8 1_555 0.133 0.025 -0.488 4.039 5.943 -3.326 7 A_DT12:DA8_B A 12 ? B 8 ? 20 1 1 C DG 13 1_555 D DC 7 1_555 -0.413 0.011 0.289 11.145 -4.638 -2.012 8 A_DG13:DC7_B A 13 ? B 7 ? 19 1 1 C DG 14 1_555 D DC 6 1_555 0.172 0.052 0.340 6.549 -13.528 -5.095 9 A_DG14:DC6_B A 14 ? B 6 ? 19 1 1 C DA 15 1_555 D DT 5 1_555 0.257 0.104 0.004 -5.919 -12.598 -7.861 10 A_DA15:DT5_B A 15 ? B 5 ? 20 1 1 C DC 16 1_555 D DG 4 1_555 0.076 0.241 0.190 -0.766 -1.698 -0.229 11 A_DC16:DG4_B A 16 ? B 4 ? 19 1 1 C DG 17 1_555 D DC 3 1_555 -0.200 -0.050 0.193 10.855 6.602 -4.583 12 A_DG17:DC3_B A 17 ? B 3 ? 19 1 1 C DG 18 1_555 D DC 2 1_555 0.399 0.054 -0.074 0.199 1.126 -6.982 13 A_DG18:DC2_B A 18 ? B 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DC 2 1_555 D DG 18 1_555 C DG 3 1_555 D DC 17 1_555 -1.098 0.546 3.089 -3.830 9.444 36.935 -0.334 1.201 3.222 14.570 5.909 38.268 1 AA_DC2DG3:DC17DG18_BB A 2 ? B 18 ? A 3 ? B 17 ? 1 C DG 3 1_555 D DC 17 1_555 C DA 4 1_555 D DT 16 1_555 -0.867 -0.524 3.503 -0.339 -5.915 39.989 -0.038 1.215 3.549 -8.592 0.492 40.408 2 AA_DG3DA4:DT16DC17_BB A 3 ? B 17 ? A 4 ? B 16 ? 1 C DA 4 1_555 D DT 16 1_555 C DG 5 1_555 D DC 15 1_555 1.027 -0.273 3.535 -2.202 0.894 39.418 -0.517 -1.798 3.468 1.324 3.261 39.487 3 AA_DA4DG5:DC15DT16_BB A 4 ? B 16 ? A 5 ? B 15 ? 1 C DG 5 1_555 D DC 15 1_555 C DT 6 1_555 D DA 14 1_555 -0.641 -0.686 3.184 -3.099 8.060 25.927 -3.370 0.621 2.898 17.362 6.675 27.304 4 AA_DG5DT6:DA14DC15_BB A 5 ? B 15 ? A 6 ? B 14 ? 1 C DT 6 1_555 D DA 14 1_555 C DG 7 1_555 D DC 13 1_555 -0.113 0.919 2.985 -5.193 0.546 34.736 1.449 -0.526 2.984 0.908 8.638 35.114 5 AA_DT6DG7:DC13DA14_BB A 6 ? B 14 ? A 7 ? B 13 ? 1 C DT 12 1_555 D DA 8 1_555 C DG 13 1_555 D DC 7 1_555 -0.135 1.378 3.204 -4.724 3.945 32.626 1.746 -0.562 3.329 6.946 8.317 33.186 6 AA_DT12DG13:DC7DA8_BB A 12 ? B 8 ? A 13 ? B 7 ? 1 C DG 13 1_555 D DC 7 1_555 C DG 14 1_555 D DC 6 1_555 -0.300 -0.499 3.387 -0.644 4.592 37.189 -1.395 0.381 3.309 7.166 1.004 37.466 7 AA_DG13DG14:DC6DC7_BB A 13 ? B 7 ? A 14 ? B 6 ? 1 C DG 14 1_555 D DC 6 1_555 C DA 15 1_555 D DT 5 1_555 -0.502 -0.215 3.495 0.942 -2.713 36.227 0.060 0.945 3.488 -4.354 -1.512 36.337 8 AA_DG14DA15:DT5DC6_BB A 14 ? B 6 ? A 15 ? B 5 ? 1 C DA 15 1_555 D DT 5 1_555 C DC 16 1_555 D DG 4 1_555 0.724 -0.974 3.251 -1.420 0.178 33.070 -1.739 -1.508 3.213 0.312 2.493 33.100 9 AA_DA15DC16:DG4DT5_BB A 15 ? B 5 ? A 16 ? B 4 ? 1 C DC 16 1_555 D DG 4 1_555 C DG 17 1_555 D DC 3 1_555 0.522 0.404 3.102 3.056 -1.036 32.287 0.897 -0.423 3.123 -1.857 -5.479 32.444 10 AA_DC16DG17:DC3DG4_BB A 16 ? B 4 ? A 17 ? B 3 ? 1 C DG 17 1_555 D DC 3 1_555 C DG 18 1_555 D DC 2 1_555 -0.661 -0.469 3.605 -0.636 3.901 38.162 -1.248 0.919 3.552 5.946 0.970 38.359 11 AA_DG17DG18:DC2DC3_BB A 17 ? B 3 ? A 18 ? B 2 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1KEG _pdbx_initial_refinement_model.details 'PDB entry 1KEG' # _atom_sites.entry_id 3VW3 _atom_sites.fract_transf_matrix[1][1] 0.014613 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014613 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004104 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CO N O P S # loop_