HEADER METAL TRANSPORT 10-FEB-13 3W5X TITLE MAMM-CTD COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAGNETOSOME PROTEIN MAMM; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 215-318; COMPND 5 SYNONYM: MAGNETOSOME PROTEIN MAMM, CATION EFFLUX PROTEIN FAMILY, MAMM COMPND 6 PROTEIN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MAGNETOSPIRILLUM GRYPHISWALDENSE; SOURCE 3 ORGANISM_TAXID: 431944; SOURCE 4 STRAIN: MSR-1; SOURCE 5 GENE: MAMM, MGI491, MGR_4095; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSSETA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS CATION DIFFUSION FACILITATOR, CDF, DIVALENT CATION TRANSPORT, METAL KEYWDS 2 ION TRANSPORT, METAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR N.ZEYTUNI,G.DAVIDOV,R.ZARIVACH REVDAT 3 08-NOV-23 3W5X 1 REMARK SEQADV REVDAT 2 22-NOV-17 3W5X 1 REMARK REVDAT 1 16-APR-14 3W5X 0 JRNL AUTH N.ZEYTUNI,R.UEBE,M.MAES,G.DAVIDOV,M.BARAM,O.RASCHDORF, JRNL AUTH 2 M.NADAV-TSUBERY,S.KOLUSHEVA,R.BITTON,G.GOOBES,A.FRIEDLER, JRNL AUTH 3 Y.MILLER,D.SCHULER,R.ZARIVACH JRNL TITL CATION DIFFUSION FACILITATORS TRANSPORT INITIATION AND JRNL TITL 2 REGULATION IS MEDIATED BY CATION INDUCED CONFORMATIONAL JRNL TITL 3 CHANGES OF THE CYTOPLASMIC DOMAIN JRNL REF PLOS ONE V. 9 92141 2014 JRNL REFN ESSN 1932-6203 JRNL PMID 24658343 JRNL DOI 10.1371/JOURNAL.PONE.0092141 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.28 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 12499 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 613 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 862 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.05 REMARK 3 BIN R VALUE (WORKING SET) : 0.2830 REMARK 3 BIN FREE R VALUE SET COUNT : 45 REMARK 3 BIN FREE R VALUE : 0.3740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 619 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 82 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.18000 REMARK 3 B22 (A**2) : -0.13000 REMARK 3 B33 (A**2) : -0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.081 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.085 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.050 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.936 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 680 ; 0.025 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 455 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 930 ; 2.149 ; 1.941 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1106 ; 1.088 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 91 ; 5.741 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 36 ;31.871 ;23.056 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 119 ;12.715 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;22.102 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 103 ; 0.144 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 770 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 138 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 414 ; 1.551 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 168 ; 0.530 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 673 ; 2.651 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 266 ; 4.355 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 251 ; 7.170 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 212 A 224 REMARK 3 ORIGIN FOR THE GROUP (A): 4.3547 20.9168 7.5507 REMARK 3 T TENSOR REMARK 3 T11: 0.0494 T22: 0.0764 REMARK 3 T33: 0.0439 T12: 0.0062 REMARK 3 T13: -0.0145 T23: -0.0337 REMARK 3 L TENSOR REMARK 3 L11: 0.0564 L22: 0.3828 REMARK 3 L33: 2.1449 L12: -0.6937 REMARK 3 L13: 0.6645 L23: 0.9147 REMARK 3 S TENSOR REMARK 3 S11: -0.0088 S12: 0.0646 S13: 0.0690 REMARK 3 S21: 0.2217 S22: 0.1164 S23: -0.1424 REMARK 3 S31: 0.0998 S32: 0.1617 S33: -0.1076 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 225 A 236 REMARK 3 ORIGIN FOR THE GROUP (A): 4.9597 7.9758 0.0932 REMARK 3 T TENSOR REMARK 3 T11: 0.0911 T22: 0.0586 REMARK 3 T33: 0.0350 T12: 0.0567 REMARK 3 T13: -0.0506 T23: -0.0254 REMARK 3 L TENSOR REMARK 3 L11: 0.6287 L22: 1.9068 REMARK 3 L33: 3.0600 L12: 0.1714 REMARK 3 L13: -1.1713 L23: 0.3736 REMARK 3 S TENSOR REMARK 3 S11: 0.0247 S12: -0.0241 S13: 0.1185 REMARK 3 S21: 0.3721 S22: 0.1569 S23: -0.0865 REMARK 3 S31: 0.2944 S32: 0.3781 S33: -0.1816 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 237 A 240 REMARK 3 ORIGIN FOR THE GROUP (A): 2.8227 24.6117 -3.3540 REMARK 3 T TENSOR REMARK 3 T11: 0.0333 T22: 0.0615 REMARK 3 T33: 0.1305 T12: -0.0002 REMARK 3 T13: 0.0372 T23: -0.0500 REMARK 3 L TENSOR REMARK 3 L11: 6.0037 L22: 7.2926 REMARK 3 L33: 1.5561 L12: -6.5435 REMARK 3 L13: -3.4383 L23: 1.4979 REMARK 3 S TENSOR REMARK 3 S11: 0.5647 S12: 0.1077 S13: 0.3977 REMARK 3 S21: -0.5379 S22: -0.2450 S23: -0.3851 REMARK 3 S31: -0.1490 S32: -0.0399 S33: -0.3197 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 241 A 246 REMARK 3 ORIGIN FOR THE GROUP (A): -4.5318 29.2838 4.3504 REMARK 3 T TENSOR REMARK 3 T11: 0.0175 T22: 0.0642 REMARK 3 T33: 0.0856 T12: -0.0055 REMARK 3 T13: -0.0005 T23: -0.0318 REMARK 3 L TENSOR REMARK 3 L11: 5.0098 L22: 2.0853 REMARK 3 L33: 0.6390 L12: -2.6383 REMARK 3 L13: -0.6154 L23: 0.6561 REMARK 3 S TENSOR REMARK 3 S11: -0.0224 S12: -0.1946 S13: 0.1755 REMARK 3 S21: -0.0508 S22: 0.0922 S23: -0.0740 REMARK 3 S31: 0.0377 S32: -0.0158 S33: -0.0699 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 247 A 258 REMARK 3 ORIGIN FOR THE GROUP (A): 2.0487 10.4699 -6.2238 REMARK 3 T TENSOR REMARK 3 T11: 0.0470 T22: 0.0521 REMARK 3 T33: 0.0763 T12: 0.0197 REMARK 3 T13: -0.0285 T23: -0.0370 REMARK 3 L TENSOR REMARK 3 L11: -0.1230 L22: 1.8584 REMARK 3 L33: 0.9724 L12: -0.8309 REMARK 3 L13: 0.2823 L23: 0.6289 REMARK 3 S TENSOR REMARK 3 S11: 0.1114 S12: -0.0255 S13: 0.0310 REMARK 3 S21: -0.0869 S22: 0.0378 S23: 0.0584 REMARK 3 S31: 0.0825 S32: 0.0530 S33: -0.1492 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 259 A 264 REMARK 3 ORIGIN FOR THE GROUP (A): -4.1884 1.9847 -9.5189 REMARK 3 T TENSOR REMARK 3 T11: 0.1194 T22: 0.0110 REMARK 3 T33: 0.0558 T12: -0.0298 REMARK 3 T13: -0.0580 T23: -0.0132 REMARK 3 L TENSOR REMARK 3 L11: -2.1034 L22: 3.4002 REMARK 3 L33: 7.8142 L12: -0.8875 REMARK 3 L13: -1.0089 L23: 3.6362 REMARK 3 S TENSOR REMARK 3 S11: 0.0442 S12: 0.0418 S13: 0.2710 REMARK 3 S21: 0.0446 S22: -0.1642 S23: 0.0609 REMARK 3 S31: 0.4709 S32: -0.3080 S33: 0.1200 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 265 A 276 REMARK 3 ORIGIN FOR THE GROUP (A): -5.5082 9.5387 0.0000 REMARK 3 T TENSOR REMARK 3 T11: 0.0779 T22: 0.0564 REMARK 3 T33: 0.0690 T12: -0.0317 REMARK 3 T13: -0.0232 T23: -0.0217 REMARK 3 L TENSOR REMARK 3 L11: -0.4917 L22: 4.3110 REMARK 3 L33: 2.4182 L12: 0.2382 REMARK 3 L13: -0.2743 L23: 3.1157 REMARK 3 S TENSOR REMARK 3 S11: 0.0528 S12: -0.0673 S13: 0.0726 REMARK 3 S21: 0.0710 S22: -0.0941 S23: 0.1754 REMARK 3 S31: 0.2338 S32: -0.1725 S33: 0.0413 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 277 A 283 REMARK 3 ORIGIN FOR THE GROUP (A): -5.6602 19.9703 7.0718 REMARK 3 T TENSOR REMARK 3 T11: 0.0439 T22: 0.0825 REMARK 3 T33: 0.0552 T12: -0.0067 REMARK 3 T13: 0.0029 T23: -0.0336 REMARK 3 L TENSOR REMARK 3 L11: -0.8251 L22: 3.7510 REMARK 3 L33: 2.9705 L12: -0.6365 REMARK 3 L13: 0.4885 L23: -1.7043 REMARK 3 S TENSOR REMARK 3 S11: 0.0434 S12: 0.0631 S13: 0.0237 REMARK 3 S21: 0.2594 S22: -0.0458 S23: 0.2541 REMARK 3 S31: 0.1390 S32: -0.1149 S33: 0.0024 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 284 A 291 REMARK 3 ORIGIN FOR THE GROUP (A): 2.5723 11.8249 -7.6526 REMARK 3 T TENSOR REMARK 3 T11: 0.0483 T22: 0.0762 REMARK 3 T33: 0.0680 T12: 0.0382 REMARK 3 T13: -0.0099 T23: -0.0165 REMARK 3 L TENSOR REMARK 3 L11: -0.9632 L22: 5.5179 REMARK 3 L33: 0.6419 L12: -0.9576 REMARK 3 L13: 0.8160 L23: 2.4995 REMARK 3 S TENSOR REMARK 3 S11: 0.1090 S12: 0.2039 S13: 0.1727 REMARK 3 S21: -0.0073 S22: -0.0967 S23: -0.1412 REMARK 3 S31: 0.1175 S32: -0.0046 S33: -0.0123 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 3W5X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1000095926. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.939 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12559 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.48000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3BYP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 4000, 0.2M AMMONIUM SULFATE, REMARK 280 0.1M SODIUM ACETATE , PH 5.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.77100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 26.77100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 18.44100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.27950 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 18.44100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.27950 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 26.77100 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 18.44100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 47.27950 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 26.77100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 18.44100 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 47.27950 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -26.77100 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 211 REMARK 465 GLU A 292 REMARK 465 ILE A 293 REMARK 465 GLY A 294 REMARK 465 ASP A 295 REMARK 465 THR A 296 REMARK 465 THR A 297 REMARK 465 LYS A 298 REMARK 465 PRO A 299 REMARK 465 SER A 300 REMARK 465 PHE A 301 REMARK 465 SER A 302 REMARK 465 ASP A 303 REMARK 465 GLN A 304 REMARK 465 PRO A 305 REMARK 465 LEU A 306 REMARK 465 SER A 307 REMARK 465 PHE A 308 REMARK 465 ASP A 309 REMARK 465 GLU A 310 REMARK 465 VAL A 311 REMARK 465 MET A 312 REMARK 465 LEU A 313 REMARK 465 SER A 314 REMARK 465 LYS A 315 REMARK 465 VAL A 316 REMARK 465 ASP A 317 REMARK 465 ASN A 318 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 566 O HOH A 566 3554 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 280 NE - CZ - NH1 ANGL. DEV. = -4.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 232 73.77 -110.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3W5Y RELATED DB: PDB REMARK 900 RELATED ID: 3W5Z RELATED DB: PDB REMARK 900 RELATED ID: 3W60 RELATED DB: PDB REMARK 900 RELATED ID: 3W61 RELATED DB: PDB REMARK 900 RELATED ID: 3W62 RELATED DB: PDB REMARK 900 RELATED ID: 3W63 RELATED DB: PDB REMARK 900 RELATED ID: 3W64 RELATED DB: PDB REMARK 900 RELATED ID: 3W65 RELATED DB: PDB REMARK 900 RELATED ID: 3W66 RELATED DB: PDB REMARK 900 RELATED ID: 3W8P RELATED DB: PDB DBREF 3W5X A 215 318 UNP Q6NE57 Q6NE57_9PROT 215 318 SEQADV 3W5X GLY A 211 UNP Q6NE57 EXPRESSION TAG SEQADV 3W5X SER A 212 UNP Q6NE57 EXPRESSION TAG SEQADV 3W5X HIS A 213 UNP Q6NE57 EXPRESSION TAG SEQADV 3W5X MET A 214 UNP Q6NE57 EXPRESSION TAG SEQRES 1 A 108 GLY SER HIS MET GLU ALA VAL GLN ASN ARG ILE VAL GLU SEQRES 2 A 108 ALA ALA GLU ARG VAL PRO GLY VAL ARG GLY VAL ILE HIS SEQRES 3 A 108 LEU ARG ALA ARG TYR VAL GLY GLN ASP ILE TRP ALA ASP SEQRES 4 A 108 MET ILE ILE GLY VAL ASP PRO GLU ASN THR VAL GLU GLN SEQRES 5 A 108 ALA HIS GLU ILE CYS GLU ALA VAL GLN ALA ALA VAL CYS SEQRES 6 A 108 GLY LYS ILE ARG ARG ILE GLU SER LEU HIS VAL SER ALA SEQRES 7 A 108 GLU ALA ARG GLU ILE GLY ASP THR THR LYS PRO SER PHE SEQRES 8 A 108 SER ASP GLN PRO LEU SER PHE ASP GLU VAL MET LEU SER SEQRES 9 A 108 LYS VAL ASP ASN HET SO4 A 401 5 HET SO4 A 402 5 HET SO4 A 403 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 3(O4 S 2-) FORMUL 5 HOH *82(H2 O) HELIX 1 1 HIS A 213 ARG A 227 1 15 HELIX 2 2 THR A 259 ILE A 278 1 20 SHEET 1 A 3 VAL A 234 VAL A 242 0 SHEET 2 A 3 ASP A 245 VAL A 254 -1 O ASP A 245 N VAL A 242 SHEET 3 A 3 ILE A 281 ALA A 290 1 O SER A 287 N ILE A 252 SITE 1 AC1 8 ALA A 216 ARG A 220 ILE A 278 ARG A 279 SITE 2 AC1 8 ARG A 280 HOH A 520 HOH A 572 HOH A 582 SITE 1 AC2 4 SER A 212 HIS A 213 ARG A 280 HOH A 578 SITE 1 AC3 6 PRO A 229 GLY A 230 ARG A 232 HOH A 505 SITE 2 AC3 6 HOH A 510 HOH A 557 CRYST1 36.882 94.559 53.542 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027113 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010575 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018677 0.00000