HEADER METAL TRANSPORT 20-MAR-13 3W8P TITLE MAMM-CTD D249A&H28A MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAGNETOSOME PROTEIN MAMM; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 215-318; COMPND 5 SYNONYM: MAGNETOSOME PROTEIN MAMM, CATION EFFLUX PROTEIN FAMILY, MAMM COMPND 6 PROTEIN; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MAGNETOSPIRILLUM GRYPHISWALDENSE; SOURCE 3 ORGANISM_TAXID: 431944; SOURCE 4 STRAIN: MSR-1; SOURCE 5 GENE: MAMM, MGI491, MGR_4095; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSSETA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS CATION DIFFUSION FACILITATOR, CDF, METAL ION TRANSPORT, METAL KEYWDS 2 TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR N.ZEYTUNI,G.DAVIDOV,R.ZARIVACH REVDAT 3 08-NOV-23 3W8P 1 REMARK SEQADV LINK REVDAT 2 22-NOV-17 3W8P 1 REMARK REVDAT 1 16-APR-14 3W8P 0 JRNL AUTH N.ZEYTUNI,R.UEBE,M.MAES,G.DAVIDOV,M.BARAM,O.RASCHDORF, JRNL AUTH 2 M.NADAV-TSUBERY,S.KOLUSHEVA,R.BITTON,G.GOOBES,A.FRIEDLER, JRNL AUTH 3 Y.MILLER,D.SCHULER,R.ZARIVACH JRNL TITL CATION DIFFUSION FACILITATORS TRANSPORT INITIATION AND JRNL TITL 2 REGULATION IS MEDIATED BY CATION INDUCED CONFORMATIONAL JRNL TITL 3 CHANGES OF THE CYTOPLASMIC DOMAIN JRNL REF PLOS ONE V. 9 92141 2014 JRNL REFN ESSN 1932-6203 JRNL PMID 24658343 JRNL DOI 10.1371/JOURNAL.PONE.0092141 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 19682 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 992 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1215 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.99 REMARK 3 BIN R VALUE (WORKING SET) : 0.2200 REMARK 3 BIN FREE R VALUE SET COUNT : 55 REMARK 3 BIN FREE R VALUE : 0.2480 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1386 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 166 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.70000 REMARK 3 B22 (A**2) : -1.49000 REMARK 3 B33 (A**2) : -2.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.140 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.134 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.094 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.649 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1487 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1447 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2027 ; 1.976 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3323 ; 1.420 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 197 ; 6.580 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 71 ;35.578 ;23.521 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 255 ;15.091 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;16.645 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 234 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1697 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 335 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 742 ; 2.340 ; 2.353 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 741 ; 2.336 ; 2.351 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 929 ; 3.180 ; 3.505 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 212 300 B 212 300 4803 0.190 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 212 A 301 REMARK 3 ORIGIN FOR THE GROUP (A): 18.0192 7.9982 -13.5295 REMARK 3 T TENSOR REMARK 3 T11: 0.0428 T22: 0.0716 REMARK 3 T33: 0.1000 T12: 0.0456 REMARK 3 T13: -0.0067 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 0.7632 L22: 1.0894 REMARK 3 L33: 1.8393 L12: -0.8262 REMARK 3 L13: 0.6233 L23: -0.1712 REMARK 3 S TENSOR REMARK 3 S11: -0.0042 S12: -0.0088 S13: -0.0798 REMARK 3 S21: 0.0430 S22: -0.0040 S23: 0.1100 REMARK 3 S31: 0.0409 S32: -0.1025 S33: 0.0082 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 212 B 301 REMARK 3 ORIGIN FOR THE GROUP (A): 26.9209 13.9731 -35.9228 REMARK 3 T TENSOR REMARK 3 T11: 0.0877 T22: 0.0696 REMARK 3 T33: 0.0849 T12: 0.0706 REMARK 3 T13: 0.0061 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.1967 L22: 1.6471 REMARK 3 L33: 0.5891 L12: -0.4032 REMARK 3 L13: -0.2453 L23: 0.0461 REMARK 3 S TENSOR REMARK 3 S11: 0.0063 S12: 0.0282 S13: 0.0454 REMARK 3 S21: -0.0914 S22: -0.0328 S23: -0.1933 REMARK 3 S31: -0.0056 S32: -0.0814 S33: 0.0265 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 3W8P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000096026. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.947 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19801 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 10.40 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.90 REMARK 200 R MERGE FOR SHELL (I) : 0.50100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3W5X REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH=6.2, 26% PEG 3350, REMARK 280 0.2M AMSO4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K, PH REMARK 280 6.2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.34650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 32.34650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.78000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.76300 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.78000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.76300 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 32.34650 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.78000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.76300 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 32.34650 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.78000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 43.76300 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 562 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 302 REMARK 465 ASP A 303 REMARK 465 GLN A 304 REMARK 465 PRO A 305 REMARK 465 LEU A 306 REMARK 465 SER A 307 REMARK 465 PHE A 308 REMARK 465 ASP A 309 REMARK 465 GLU A 310 REMARK 465 VAL A 311 REMARK 465 MET A 312 REMARK 465 LEU A 313 REMARK 465 SER A 314 REMARK 465 LYS A 315 REMARK 465 VAL A 316 REMARK 465 ASP A 317 REMARK 465 ASN A 318 REMARK 465 GLY B 211 REMARK 465 SER B 302 REMARK 465 ASP B 303 REMARK 465 GLN B 304 REMARK 465 PRO B 305 REMARK 465 LEU B 306 REMARK 465 SER B 307 REMARK 465 PHE B 308 REMARK 465 ASP B 309 REMARK 465 GLU B 310 REMARK 465 VAL B 311 REMARK 465 MET B 312 REMARK 465 LEU B 313 REMARK 465 SER B 314 REMARK 465 LYS B 315 REMARK 465 VAL B 316 REMARK 465 ASP B 317 REMARK 465 ASN B 318 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 544 O HOH B 573 2.12 REMARK 500 OE2 GLU B 261 O HOH B 505 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 279 NE - CZ - NH1 ANGL. DEV. = -3.7 DEGREES REMARK 500 MET B 214 CG - SD - CE ANGL. DEV. = 9.7 DEGREES REMARK 500 ASP B 255 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3W5X RELATED DB: PDB REMARK 900 WILD TYPE REMARK 900 RELATED ID: 3W5Y RELATED DB: PDB REMARK 900 WILD TYPE REMARK 900 RELATED ID: 3W5Z RELATED DB: PDB REMARK 900 D249A MUTANT REMARK 900 RELATED ID: 3W60 RELATED DB: PDB REMARK 900 H264A MUTANT REMARK 900 RELATED ID: 3W61 RELATED DB: PDB REMARK 900 H285A MUTANT REMARK 900 RELATED ID: 3W62 RELATED DB: PDB REMARK 900 E289A MUTANT REMARK 900 RELATED ID: 3W63 RELATED DB: PDB REMARK 900 215-293 REMARK 900 RELATED ID: 3W64 RELATED DB: PDB REMARK 900 215-293 REMARK 900 RELATED ID: 3W65 RELATED DB: PDB REMARK 900 D249A&H264A MUTANT REMARK 900 RELATED ID: 3W66 RELATED DB: PDB REMARK 900 D249A&H285A MUTANT DBREF 3W8P A 215 318 UNP Q6NE57 Q6NE57_9PROT 215 318 DBREF 3W8P B 215 318 UNP Q6NE57 Q6NE57_9PROT 215 318 SEQADV 3W8P GLY A 211 UNP Q6NE57 EXPRESSION TAG SEQADV 3W8P SER A 212 UNP Q6NE57 EXPRESSION TAG SEQADV 3W8P HIS A 213 UNP Q6NE57 EXPRESSION TAG SEQADV 3W8P MET A 214 UNP Q6NE57 EXPRESSION TAG SEQADV 3W8P ALA A 249 UNP Q6NE57 ASP 249 ENGINEERED MUTATION SEQADV 3W8P ALA A 285 UNP Q6NE57 HIS 285 ENGINEERED MUTATION SEQADV 3W8P GLY B 211 UNP Q6NE57 EXPRESSION TAG SEQADV 3W8P SER B 212 UNP Q6NE57 EXPRESSION TAG SEQADV 3W8P HIS B 213 UNP Q6NE57 EXPRESSION TAG SEQADV 3W8P MET B 214 UNP Q6NE57 EXPRESSION TAG SEQADV 3W8P ALA B 249 UNP Q6NE57 ASP 249 ENGINEERED MUTATION SEQADV 3W8P ALA B 285 UNP Q6NE57 HIS 285 ENGINEERED MUTATION SEQRES 1 A 108 GLY SER HIS MET GLU ALA VAL GLN ASN ARG ILE VAL GLU SEQRES 2 A 108 ALA ALA GLU ARG VAL PRO GLY VAL ARG GLY VAL ILE HIS SEQRES 3 A 108 LEU ARG ALA ARG TYR VAL GLY GLN ASP ILE TRP ALA ALA SEQRES 4 A 108 MET ILE ILE GLY VAL ASP PRO GLU ASN THR VAL GLU GLN SEQRES 5 A 108 ALA HIS GLU ILE CYS GLU ALA VAL GLN ALA ALA VAL CME SEQRES 6 A 108 GLY LYS ILE ARG ARG ILE GLU SER LEU ALA VAL SER ALA SEQRES 7 A 108 GLU ALA ARG GLU ILE GLY ASP THR THR LYS PRO SER PHE SEQRES 8 A 108 SER ASP GLN PRO LEU SER PHE ASP GLU VAL MET LEU SER SEQRES 9 A 108 LYS VAL ASP ASN SEQRES 1 B 108 GLY SER HIS MET GLU ALA VAL GLN ASN ARG ILE VAL GLU SEQRES 2 B 108 ALA ALA GLU ARG VAL PRO GLY VAL ARG GLY VAL ILE HIS SEQRES 3 B 108 LEU ARG ALA ARG TYR VAL GLY GLN ASP ILE TRP ALA ALA SEQRES 4 B 108 MET ILE ILE GLY VAL ASP PRO GLU ASN THR VAL GLU GLN SEQRES 5 B 108 ALA HIS GLU ILE CYS GLU ALA VAL GLN ALA ALA VAL CME SEQRES 6 B 108 GLY LYS ILE ARG ARG ILE GLU SER LEU ALA VAL SER ALA SEQRES 7 B 108 GLU ALA ARG GLU ILE GLY ASP THR THR LYS PRO SER PHE SEQRES 8 B 108 SER ASP GLN PRO LEU SER PHE ASP GLU VAL MET LEU SER SEQRES 9 B 108 LYS VAL ASP ASN MODRES 3W8P CME A 275 CYS S,S-(2-HYDROXYETHYL)THIOCYSTEINE MODRES 3W8P CME B 275 CYS S,S-(2-HYDROXYETHYL)THIOCYSTEINE HET CME A 275 10 HET CME B 275 10 HET SO4 A 401 5 HET SO4 A 402 5 HET SO4 B 401 5 HET SO4 B 402 5 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM SO4 SULFATE ION FORMUL 1 CME 2(C5 H11 N O3 S2) FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 HOH *166(H2 O) HELIX 1 1 GLY A 211 ARG A 227 1 17 HELIX 2 2 THR A 259 ILE A 278 1 20 HELIX 3 3 MET B 214 ARG B 227 1 14 HELIX 4 4 THR B 259 ILE B 278 1 20 SHEET 1 A 3 GLY A 233 VAL A 242 0 SHEET 2 A 3 ASP A 245 VAL A 254 -1 O GLY A 253 N GLY A 233 SHEET 3 A 3 ILE A 281 ALA A 290 1 O ALA A 285 N MET A 250 SHEET 1 B 3 GLY B 233 VAL B 242 0 SHEET 2 B 3 ASP B 245 VAL B 254 -1 O GLY B 253 N GLY B 233 SHEET 3 B 3 ILE B 281 ALA B 290 1 O ALA B 285 N MET B 250 LINK C VAL A 274 N CME A 275 1555 1555 1.32 LINK C CME A 275 N GLY A 276 1555 1555 1.34 LINK C VAL B 274 N CME B 275 1555 1555 1.32 LINK C CME B 275 N GLY B 276 1555 1555 1.33 SITE 1 AC1 8 HIS A 213 ARG A 220 LYS A 277 ILE A 278 SITE 2 AC1 8 ARG A 279 ARG A 280 HOH A 541 HOH A 552 SITE 1 AC2 6 GLY A 211 HIS A 213 MET A 214 ARG A 279 SITE 2 AC2 6 HOH A 551 SER B 212 SITE 1 AC3 6 ARG A 232 ASP A 255 HOH A 514 HOH A 521 SITE 2 AC3 6 HOH A 584 ARG B 227 SITE 1 AC4 8 ARG A 240 HOH A 540 ARG B 220 LYS B 277 SITE 2 AC4 8 ILE B 278 ARG B 279 ARG B 280 HOH B 501 CRYST1 75.560 87.526 64.693 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013235 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011425 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015458 0.00000