data_3W93 # _entry.id 3W93 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3W93 pdb_00003w93 10.2210/pdb3w93/pdb RCSB RCSB096040 ? ? WWPDB D_1000096040 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3W8V . unspecified PDB 3W92 . unspecified # _pdbx_database_status.entry_id 3W93 _pdbx_database_status.methods_development_category ? _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2013-03-24 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shahar, A.' 1 'Zarivach, R.' 2 'Ashkenasy, G.' 3 # _citation.id primary _citation.title 'A high-resolution structure that provides insight into coiled-coil thiodepsipeptide dynamic chemistry' _citation.journal_abbrev Angew.Chem.Int.Ed.Engl. _citation.journal_volume 52 _citation.page_first 9944 _citation.page_last 9947 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country GE _citation.journal_id_ISSN 1433-7851 _citation.journal_id_CSD 9999 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23929823 _citation.pdbx_database_id_DOI 10.1002/anie.201303900 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dadon, Z.' 1 ? primary 'Samiappan, M.' 2 ? primary 'Shahar, A.' 3 ? primary 'Zarivach, R.' 4 ? primary 'Ashkenasy, G.' 5 ? # _cell.entry_id 3W93 _cell.length_a 31.722 _cell.length_b 33.881 _cell.length_c 95.179 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3W93 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Coiled coil peptide' 3587.344 3 ? ? ? ? 2 non-polymer syn 'PARA ACETAMIDO BENZOIC ACID' 179.173 4 ? ? ? ? 3 water nat water 18.015 77 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'RVARLEKKVSALEKKVA(GOA)LEKEVARLKKLVGE' _entity_poly.pdbx_seq_one_letter_code_can RVARLEKKVSALEKKVAXLEKEVARLKKLVGE _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 VAL n 1 3 ALA n 1 4 ARG n 1 5 LEU n 1 6 GLU n 1 7 LYS n 1 8 LYS n 1 9 VAL n 1 10 SER n 1 11 ALA n 1 12 LEU n 1 13 GLU n 1 14 LYS n 1 15 LYS n 1 16 VAL n 1 17 ALA n 1 18 GOA n 1 19 LEU n 1 20 GLU n 1 21 LYS n 1 22 GLU n 1 23 VAL n 1 24 ALA n 1 25 ARG n 1 26 LEU n 1 27 LYS n 1 28 LYS n 1 29 LEU n 1 30 VAL n 1 31 GLY n 1 32 GLU n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'This sequence occurs naturally in GCN4 protein family' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3W93 _struct_ref.pdbx_db_accession 3W93 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3W93 A 1 ? 32 ? 3W93 1 ? 32 ? 1 32 2 1 3W93 B 1 ? 32 ? 3W93 1 ? 32 ? 1 32 3 1 3W93 C 1 ? 32 ? 3W93 1 ? 32 ? 1 32 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOA non-polymer . 'GLYCOLIC ACID' 'HYDROXYACETIC ACID; HYDROXYETHANOIC ACID' 'C2 H4 O3' 76.051 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TYZ non-polymer . 'PARA ACETAMIDO BENZOIC ACID' ? 'C9 H9 N O3' 179.173 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3W93 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 0.563 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 48.25 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '54% Tacsimate, pH 7.2, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2012-11-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04 # _reflns.entry_id 3W93 _reflns.d_resolution_high 1.500 _reflns.d_resolution_low 50.000 _reflns.number_obs 16746 _reflns.pdbx_Rmerge_I_obs 0.053 _reflns.pdbx_netI_over_sigmaI 14.600 _reflns.pdbx_chi_squared 2.032 _reflns.pdbx_redundancy 3.000 _reflns.percent_possible_obs 97.400 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all 17203 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.500 1.530 ? ? ? ? 0.256 ? ? 1.229 2.900 ? ? ? 787 ? ? ? ? 96.800 ? ? 1 1 1.530 1.550 ? ? ? ? 0.284 ? ? 1.112 2.900 ? ? ? 840 ? ? ? ? 98.200 ? ? 2 1 1.550 1.580 ? ? ? ? 0.302 ? ? 1.043 3.000 ? ? ? 824 ? ? ? ? 98.400 ? ? 3 1 1.580 1.620 ? ? ? ? 0.250 ? ? 1.188 3.100 ? ? ? 831 ? ? ? ? 98.200 ? ? 4 1 1.620 1.650 ? ? ? ? 0.231 ? ? 1.140 3.100 ? ? ? 823 ? ? ? ? 99.300 ? ? 5 1 1.650 1.690 ? ? ? ? 0.180 ? ? 1.091 3.200 ? ? ? 832 ? ? ? ? 99.200 ? ? 6 1 1.690 1.730 ? ? ? ? 0.177 ? ? 1.267 3.100 ? ? ? 837 ? ? ? ? 98.700 ? ? 7 1 1.730 1.780 ? ? ? ? 0.144 ? ? 1.246 3.100 ? ? ? 858 ? ? ? ? 99.500 ? ? 8 1 1.780 1.830 ? ? ? ? 0.126 ? ? 1.390 3.100 ? ? ? 834 ? ? ? ? 99.400 ? ? 9 1 1.830 1.890 ? ? ? ? 0.109 ? ? 1.470 3.100 ? ? ? 852 ? ? ? ? 99.500 ? ? 10 1 1.890 1.960 ? ? ? ? 0.090 ? ? 1.679 3.100 ? ? ? 838 ? ? ? ? 99.300 ? ? 11 1 1.960 2.040 ? ? ? ? 0.081 ? ? 2.013 3.100 ? ? ? 841 ? ? ? ? 99.400 ? ? 12 1 2.040 2.130 ? ? ? ? 0.072 ? ? 2.485 3.100 ? ? ? 871 ? ? ? ? 99.400 ? ? 13 1 2.130 2.240 ? ? ? ? 0.066 ? ? 3.095 3.000 ? ? ? 846 ? ? ? ? 99.400 ? ? 14 1 2.240 2.380 ? ? ? ? 0.062 ? ? 3.565 3.000 ? ? ? 838 ? ? ? ? 98.500 ? ? 15 1 2.380 2.560 ? ? ? ? 0.060 ? ? 3.535 3.000 ? ? ? 851 ? ? ? ? 98.400 ? ? 16 1 2.560 2.820 ? ? ? ? 0.054 ? ? 3.833 2.900 ? ? ? 860 ? ? ? ? 98.500 ? ? 17 1 2.820 3.230 ? ? ? ? 0.047 ? ? 3.549 2.900 ? ? ? 881 ? ? ? ? 98.900 ? ? 18 1 3.230 4.070 ? ? ? ? 0.033 ? ? 2.755 2.800 ? ? ? 837 ? ? ? ? 92.900 ? ? 19 1 4.070 50.000 ? ? ? ? 0.031 ? ? 2.353 2.600 ? ? ? 765 ? ? ? ? 78.100 ? ? 20 1 # _refine.entry_id 3W93 _refine.ls_d_res_high 1.5000 _refine.ls_d_res_low 47.5900 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 96.8900 _refine.ls_number_reflns_obs 15795 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES: RESIDUAL ONLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2142 _refine.ls_R_factor_R_work 0.2128 _refine.ls_wR_factor_R_work 0.2162 _refine.ls_R_factor_R_free 0.2435 _refine.ls_wR_factor_R_free 0.2477 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 846 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 26.326 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.6900 _refine.aniso_B[2][2] 1.2500 _refine.aniso_B[3][3] -1.9500 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9430 _refine.correlation_coeff_Fo_to_Fc_free 0.9330 _refine.overall_SU_R_Cruickshank_DPI 0.0873 _refine.overall_SU_R_free 0.0881 _refine.pdbx_overall_ESU_R 0.0870 _refine.pdbx_overall_ESU_R_Free 0.0880 _refine.overall_SU_ML 0.0560 _refine.overall_SU_B 3.3570 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 1IJ2 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8489 _refine.B_iso_max 43.180 _refine.B_iso_min 2.940 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 741 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 48 _refine_hist.number_atoms_solvent 77 _refine_hist.number_atoms_total 866 _refine_hist.d_res_high 1.5000 _refine_hist.d_res_low 47.5900 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 786 0.029 0.022 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 612 0.004 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1029 2.415 2.105 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 1492 1.198 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 92 3.224 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 23 20.381 22.174 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 187 15.068 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 9 9.676 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 123 0.182 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 789 0.011 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 152 0.006 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 474 1.330 1.500 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 203 0.464 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 752 2.372 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 312 3.858 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 277 6.143 4.500 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.4980 _refine_ls_shell.d_res_low 1.5370 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 94.5100 _refine_ls_shell.number_reflns_R_work 1088 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2220 _refine_ls_shell.R_factor_R_free 0.3110 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 65 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1153 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3W93 _struct.title 'Crystal Structure Analysis of the synthetic GCN4 Ester coiled coil peptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3W93 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text Transcription # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 3 ? I N N 3 ? J N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 1 ? ALA A 17 ? ARG A 1 ALA A 17 1 ? 17 HELX_P HELX_P2 2 GLU A 20 ? GLY A 31 ? GLU A 20 GLY A 31 1 ? 12 HELX_P HELX_P3 3 VAL B 2 ? ALA B 17 ? VAL B 2 ALA B 17 1 ? 16 HELX_P HELX_P4 4 GLU B 20 ? GLY B 31 ? GLU B 20 GLY B 31 1 ? 12 HELX_P HELX_P5 5 VAL C 2 ? ALA C 17 ? VAL C 2 ALA C 17 1 ? 16 HELX_P HELX_P6 6 GLU C 20 ? GLY C 31 ? GLU C 20 GLY C 31 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ARG 1 N ? ? ? 1_555 D TYZ . C7 ? ? A ARG 1 A TYZ 400 1_555 ? ? ? ? ? ? ? 1.468 ? ? covale2 covale both ? A ALA 17 C ? ? ? 1_555 A GOA 18 O2 ? ? A ALA 17 A GOA 18 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale3 covale both ? A GOA 18 C ? ? ? 1_555 A LEU 19 N ? ? A GOA 18 A LEU 19 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale4 covale both ? B ALA 17 C ? ? ? 1_555 B GOA 18 O2 ? ? B ALA 17 B GOA 18 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale5 covale both ? B GOA 18 C ? ? ? 1_555 B LEU 19 N ? ? B GOA 18 B LEU 19 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale6 covale one ? B LYS 21 NZ ? ? ? 1_555 E TYZ . C7 ? ? B LYS 21 B TYZ 401 1_555 ? ? ? ? ? ? ? 1.686 ? ? covale7 covale both ? C ARG 1 N ? ? ? 1_555 F TYZ . C7 ? ? C ARG 1 C TYZ 101 1_555 ? ? ? ? ? ? ? 1.462 ? ? covale8 covale both ? C ALA 17 C ? ? ? 1_555 C GOA 18 O2 ? ? C ALA 17 C GOA 18 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale9 covale both ? C GOA 18 C ? ? ? 1_555 C LEU 19 N ? ? C GOA 18 C LEU 19 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale10 covale one ? C LYS 21 NZ ? ? ? 1_555 G TYZ . C7 ? ? C LYS 21 C TYZ 102 1_555 ? ? ? ? ? ? ? 1.356 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A TYZ 400 ? 11 'BINDING SITE FOR RESIDUE TYZ A 400' AC2 Software B TYZ 401 ? 8 'BINDING SITE FOR RESIDUE TYZ B 401' AC3 Software C TYZ 101 ? 9 'BINDING SITE FOR RESIDUE TYZ C 101' AC4 Software C TYZ 102 ? 8 'BINDING SITE FOR RESIDUE TYZ C 102' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 ARG A 1 ? ARG A 1 . ? 1_555 ? 2 AC1 11 VAL A 2 ? VAL A 2 . ? 1_555 ? 3 AC1 11 ALA A 3 ? ALA A 3 . ? 1_555 ? 4 AC1 11 ARG A 4 ? ARG A 4 . ? 1_555 ? 5 AC1 11 VAL A 30 ? VAL A 30 . ? 2_554 ? 6 AC1 11 GLY A 31 ? GLY A 31 . ? 2_554 ? 7 AC1 11 GLU A 32 ? GLU A 32 . ? 2_554 ? 8 AC1 11 GLU B 22 ? GLU B 22 . ? 3_554 ? 9 AC1 11 TYZ E . ? TYZ B 401 . ? 3_554 ? 10 AC1 11 ARG C 25 ? ARG C 25 . ? 2_554 ? 11 AC1 11 LEU C 29 ? LEU C 29 . ? 2_554 ? 12 AC2 8 ALA A 3 ? ALA A 3 . ? 3_544 ? 13 AC2 8 ARG A 4 ? ARG A 4 . ? 3_544 ? 14 AC2 8 LYS A 7 ? LYS A 7 . ? 3_544 ? 15 AC2 8 TYZ D . ? TYZ A 400 . ? 3_544 ? 16 AC2 8 HOH H . ? HOH A 507 . ? 3_544 ? 17 AC2 8 LYS B 14 ? LYS B 14 . ? 1_555 ? 18 AC2 8 GOA B 18 ? GOA B 18 . ? 1_555 ? 19 AC2 8 LYS B 21 ? LYS B 21 . ? 1_555 ? 20 AC3 9 GLU A 32 ? GLU A 32 . ? 2_654 ? 21 AC3 9 ARG C 1 ? ARG C 1 . ? 1_555 ? 22 AC3 9 VAL C 2 ? VAL C 2 . ? 1_555 ? 23 AC3 9 ALA C 3 ? ALA C 3 . ? 1_555 ? 24 AC3 9 ARG C 4 ? ARG C 4 . ? 1_555 ? 25 AC3 9 LYS C 21 ? LYS C 21 . ? 3_654 ? 26 AC3 9 TYZ G . ? TYZ C 102 . ? 3_654 ? 27 AC3 9 HOH J . ? HOH C 209 . ? 1_555 ? 28 AC3 9 HOH J . ? HOH C 223 . ? 1_555 ? 29 AC4 8 VAL A 2 ? VAL A 2 . ? 3_644 ? 30 AC4 8 LEU A 29 ? LEU A 29 . ? 4_545 ? 31 AC4 8 VAL A 30 ? VAL A 30 . ? 4_545 ? 32 AC4 8 VAL B 2 ? VAL B 2 . ? 3_644 ? 33 AC4 8 ARG C 1 ? ARG C 1 . ? 3_644 ? 34 AC4 8 LYS C 21 ? LYS C 21 . ? 1_555 ? 35 AC4 8 VAL C 30 ? VAL C 30 . ? 4_545 ? 36 AC4 8 TYZ F . ? TYZ C 101 . ? 3_644 ? # _atom_sites.entry_id 3W93 _atom_sites.fract_transf_matrix[1][1] 0.031524 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029515 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010507 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 1 1 ARG ARG A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 ARG 4 4 4 ARG ARG A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 GOA 18 18 18 GOA GLY A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 GLU 32 32 32 GLU GLU A . n B 1 1 ARG 1 1 1 ARG ARG B . n B 1 2 VAL 2 2 2 VAL VAL B . n B 1 3 ALA 3 3 3 ALA ALA B . n B 1 4 ARG 4 4 4 ARG ARG B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 GLU 6 6 6 GLU GLU B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 LYS 8 8 8 LYS LYS B . n B 1 9 VAL 9 9 9 VAL VAL B . n B 1 10 SER 10 10 10 SER SER B . n B 1 11 ALA 11 11 11 ALA ALA B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 GLU 13 13 13 GLU GLU B . n B 1 14 LYS 14 14 14 LYS LYS B . n B 1 15 LYS 15 15 15 LYS LYS B . n B 1 16 VAL 16 16 16 VAL VAL B . n B 1 17 ALA 17 17 17 ALA ALA B . n B 1 18 GOA 18 18 18 GOA GLY B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 GLU 20 20 20 GLU GLU B . n B 1 21 LYS 21 21 21 LYS LYS B . n B 1 22 GLU 22 22 22 GLU GLU B . n B 1 23 VAL 23 23 23 VAL VAL B . n B 1 24 ALA 24 24 24 ALA ALA B . n B 1 25 ARG 25 25 25 ARG ARG B . n B 1 26 LEU 26 26 26 LEU LEU B . n B 1 27 LYS 27 27 27 LYS LYS B . n B 1 28 LYS 28 28 28 LYS LYS B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 VAL 30 30 30 VAL VAL B . n B 1 31 GLY 31 31 31 GLY GLY B . n B 1 32 GLU 32 32 32 GLU GLU B . n C 1 1 ARG 1 1 1 ARG ARG C . n C 1 2 VAL 2 2 2 VAL VAL C . n C 1 3 ALA 3 3 3 ALA ALA C . n C 1 4 ARG 4 4 4 ARG ARG C . n C 1 5 LEU 5 5 5 LEU LEU C . n C 1 6 GLU 6 6 6 GLU GLU C . n C 1 7 LYS 7 7 7 LYS LYS C . n C 1 8 LYS 8 8 8 LYS LYS C . n C 1 9 VAL 9 9 9 VAL VAL C . n C 1 10 SER 10 10 10 SER SER C . n C 1 11 ALA 11 11 11 ALA ALA C . n C 1 12 LEU 12 12 12 LEU LEU C . n C 1 13 GLU 13 13 13 GLU GLU C . n C 1 14 LYS 14 14 14 LYS LYS C . n C 1 15 LYS 15 15 15 LYS LYS C . n C 1 16 VAL 16 16 16 VAL VAL C . n C 1 17 ALA 17 17 17 ALA ALA C . n C 1 18 GOA 18 18 18 GOA GLY C . n C 1 19 LEU 19 19 19 LEU LEU C . n C 1 20 GLU 20 20 20 GLU GLU C . n C 1 21 LYS 21 21 21 LYS LYS C . n C 1 22 GLU 22 22 22 GLU GLU C . n C 1 23 VAL 23 23 23 VAL VAL C . n C 1 24 ALA 24 24 24 ALA ALA C . n C 1 25 ARG 25 25 25 ARG ARG C . n C 1 26 LEU 26 26 26 LEU LEU C . n C 1 27 LYS 27 27 27 LYS LYS C . n C 1 28 LYS 28 28 28 LYS LYS C . n C 1 29 LEU 29 29 29 LEU LEU C . n C 1 30 VAL 30 30 30 VAL VAL C . n C 1 31 GLY 31 31 31 GLY GLY C . n C 1 32 GLU 32 32 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 TYZ 1 400 400 TYZ TYZ A . E 2 TYZ 1 401 401 TYZ TYZ B . F 2 TYZ 1 101 402 TYZ TYZ C . G 2 TYZ 1 102 403 TYZ TYZ C . H 3 HOH 1 501 1 HOH HOH A . H 3 HOH 2 502 3 HOH HOH A . H 3 HOH 3 503 11 HOH HOH A . H 3 HOH 4 504 13 HOH HOH A . H 3 HOH 5 505 14 HOH HOH A . H 3 HOH 6 506 16 HOH HOH A . H 3 HOH 7 507 29 HOH HOH A . H 3 HOH 8 508 31 HOH HOH A . H 3 HOH 9 509 33 HOH HOH A . H 3 HOH 10 510 35 HOH HOH A . H 3 HOH 11 511 37 HOH HOH A . H 3 HOH 12 512 58 HOH HOH A . H 3 HOH 13 513 60 HOH HOH A . H 3 HOH 14 514 62 HOH HOH A . H 3 HOH 15 515 64 HOH HOH A . H 3 HOH 16 516 67 HOH HOH A . H 3 HOH 17 517 68 HOH HOH A . H 3 HOH 18 518 70 HOH HOH A . H 3 HOH 19 519 84 HOH HOH A . H 3 HOH 20 520 107 HOH HOH A . H 3 HOH 21 521 122 HOH HOH A . H 3 HOH 22 522 135 HOH HOH A . H 3 HOH 23 523 136 HOH HOH A . I 3 HOH 1 501 6 HOH HOH B . I 3 HOH 2 502 15 HOH HOH B . I 3 HOH 3 503 19 HOH HOH B . I 3 HOH 4 504 20 HOH HOH B . I 3 HOH 5 505 21 HOH HOH B . I 3 HOH 6 506 22 HOH HOH B . I 3 HOH 7 507 26 HOH HOH B . I 3 HOH 8 508 34 HOH HOH B . I 3 HOH 9 509 39 HOH HOH B . I 3 HOH 10 510 43 HOH HOH B . I 3 HOH 11 511 44 HOH HOH B . I 3 HOH 12 512 45 HOH HOH B . I 3 HOH 13 513 46 HOH HOH B . I 3 HOH 14 514 47 HOH HOH B . I 3 HOH 15 515 72 HOH HOH B . I 3 HOH 16 516 77 HOH HOH B . I 3 HOH 17 517 79 HOH HOH B . I 3 HOH 18 518 90 HOH HOH B . I 3 HOH 19 519 91 HOH HOH B . I 3 HOH 20 520 92 HOH HOH B . I 3 HOH 21 521 113 HOH HOH B . I 3 HOH 22 522 127 HOH HOH B . I 3 HOH 23 523 137 HOH HOH B . I 3 HOH 24 524 139 HOH HOH B . J 3 HOH 1 201 2 HOH HOH C . J 3 HOH 2 202 4 HOH HOH C . J 3 HOH 3 203 5 HOH HOH C . J 3 HOH 4 204 8 HOH HOH C . J 3 HOH 5 205 17 HOH HOH C . J 3 HOH 6 206 18 HOH HOH C . J 3 HOH 7 207 23 HOH HOH C . J 3 HOH 8 208 32 HOH HOH C . J 3 HOH 9 209 51 HOH HOH C . J 3 HOH 10 210 52 HOH HOH C . J 3 HOH 11 211 53 HOH HOH C . J 3 HOH 12 212 54 HOH HOH C . J 3 HOH 13 213 55 HOH HOH C . J 3 HOH 14 214 56 HOH HOH C . J 3 HOH 15 215 57 HOH HOH C . J 3 HOH 16 216 65 HOH HOH C . J 3 HOH 17 217 66 HOH HOH C . J 3 HOH 18 218 73 HOH HOH C . J 3 HOH 19 219 74 HOH HOH C . J 3 HOH 20 220 85 HOH HOH C . J 3 HOH 21 221 86 HOH HOH C . J 3 HOH 22 222 88 HOH HOH C . J 3 HOH 23 223 118 HOH HOH C . J 3 HOH 24 224 119 HOH HOH C . J 3 HOH 25 225 120 HOH HOH C . J 3 HOH 26 226 124 HOH HOH C . J 3 HOH 27 227 133 HOH HOH C . J 3 HOH 28 228 134 HOH HOH C . J 3 HOH 29 229 140 HOH HOH C . J 3 HOH 30 230 142 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5070 ? 1 MORE -15 ? 1 'SSA (A^2)' 7020 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-02-12 2 'Structure model' 1 1 2017-11-22 3 'Structure model' 1 2 2023-11-08 4 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' 'Atomic model' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site 8 4 'Structure model' atom_site 9 4 'Structure model' atom_site_anisotrop 10 4 'Structure model' chem_comp_atom 11 4 'Structure model' chem_comp_bond 12 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.classification' 2 2 'Structure model' '_software.contact_author' 3 2 'Structure model' '_software.contact_author_email' 4 2 'Structure model' '_software.date' 5 2 'Structure model' '_software.language' 6 2 'Structure model' '_software.location' 7 2 'Structure model' '_software.name' 8 2 'Structure model' '_software.type' 9 2 'Structure model' '_software.version' 10 3 'Structure model' '_database_2.pdbx_DOI' 11 3 'Structure model' '_database_2.pdbx_database_accession' 12 3 'Structure model' '_struct_conn.pdbx_dist_value' 13 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 14 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 15 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 16 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 17 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 18 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 19 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 20 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 21 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 22 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 23 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 24 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 25 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 26 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 27 3 'Structure model' '_struct_site.pdbx_auth_seq_id' 28 4 'Structure model' '_atom_site.auth_atom_id' 29 4 'Structure model' '_atom_site.label_atom_id' 30 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 31 4 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 32 4 'Structure model' '_chem_comp_atom.atom_id' 33 4 'Structure model' '_chem_comp_bond.atom_id_1' 34 4 'Structure model' '_chem_comp_bond.atom_id_2' 35 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 8.9704 3.9736 -14.0217 0.1578 0.0966 0.0758 -0.0185 -0.0161 0.0380 0.5241 0.5135 10.4484 -0.0032 0.8145 -2.0285 -0.0884 -0.0785 0.1668 -0.0099 0.1011 -0.0400 0.1502 -0.6226 -0.0328 'X-RAY DIFFRACTION' 2 ? refined 4.1270 -2.8312 -13.9829 0.0271 0.0611 0.0316 0.0021 0.0008 0.0323 1.0316 1.5844 11.2331 0.3939 -1.6646 -0.9079 -0.0840 0.1300 -0.0461 0.1457 0.0759 0.0112 -0.1141 0.0812 -0.3793 'X-RAY DIFFRACTION' 3 ? refined 13.3811 -3.5968 -14.4884 0.0520 0.0905 0.0396 -0.0161 0.0221 0.0247 0.5747 0.8624 3.2769 0.0378 0.0009 -1.4819 0.0485 -0.1004 0.0519 -0.0228 0.0750 -0.0418 -0.0485 -0.0610 0.3423 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 32 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 400 A 400 ? . . . . ? 'X-RAY DIFFRACTION' 3 1 A 501 A 523 ? . . . . ? 'X-RAY DIFFRACTION' 4 2 B 1 B 32 ? . . . . ? 'X-RAY DIFFRACTION' 5 2 B 401 B 401 ? . . . . ? 'X-RAY DIFFRACTION' 6 2 B 501 B 524 ? . . . . ? 'X-RAY DIFFRACTION' 7 3 C 1 C 31 ? . . . . ? 'X-RAY DIFFRACTION' 8 3 C 101 C 102 ? . . . . ? 'X-RAY DIFFRACTION' 9 3 C 201 C 230 ? . . . . ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CD _pdbx_validate_rmsd_bond.auth_asym_id_1 C _pdbx_validate_rmsd_bond.auth_comp_id_1 LYS _pdbx_validate_rmsd_bond.auth_seq_id_1 28 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CE _pdbx_validate_rmsd_bond.auth_asym_id_2 C _pdbx_validate_rmsd_bond.auth_comp_id_2 LYS _pdbx_validate_rmsd_bond.auth_seq_id_2 28 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.661 _pdbx_validate_rmsd_bond.bond_target_value 1.508 _pdbx_validate_rmsd_bond.bond_deviation 0.153 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.025 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id C _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLU _pdbx_unobs_or_zero_occ_residues.auth_seq_id 32 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id C _pdbx_unobs_or_zero_occ_residues.label_comp_id GLU _pdbx_unobs_or_zero_occ_residues.label_seq_id 32 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 GLU N N N N 41 GLU CA C N S 42 GLU C C N N 43 GLU O O N N 44 GLU CB C N N 45 GLU CG C N N 46 GLU CD C N N 47 GLU OE1 O N N 48 GLU OE2 O N N 49 GLU OXT O N N 50 GLU H H N N 51 GLU H2 H N N 52 GLU HA H N N 53 GLU HB2 H N N 54 GLU HB3 H N N 55 GLU HG2 H N N 56 GLU HG3 H N N 57 GLU HE2 H N N 58 GLU HXT H N N 59 GLY N N N N 60 GLY CA C N N 61 GLY C C N N 62 GLY O O N N 63 GLY OXT O N N 64 GLY H H N N 65 GLY H2 H N N 66 GLY HA2 H N N 67 GLY HA3 H N N 68 GLY HXT H N N 69 GOA C C N N 70 GOA CA C N N 71 GOA O O N N 72 GOA OXT O N N 73 GOA O2 O N N 74 GOA H22 H N N 75 GOA H21 H N N 76 GOA HXT H N N 77 GOA H20 H N N 78 HOH O O N N 79 HOH H1 H N N 80 HOH H2 H N N 81 LEU N N N N 82 LEU CA C N S 83 LEU C C N N 84 LEU O O N N 85 LEU CB C N N 86 LEU CG C N N 87 LEU CD1 C N N 88 LEU CD2 C N N 89 LEU OXT O N N 90 LEU H H N N 91 LEU H2 H N N 92 LEU HA H N N 93 LEU HB2 H N N 94 LEU HB3 H N N 95 LEU HG H N N 96 LEU HD11 H N N 97 LEU HD12 H N N 98 LEU HD13 H N N 99 LEU HD21 H N N 100 LEU HD22 H N N 101 LEU HD23 H N N 102 LEU HXT H N N 103 LYS N N N N 104 LYS CA C N S 105 LYS C C N N 106 LYS O O N N 107 LYS CB C N N 108 LYS CG C N N 109 LYS CD C N N 110 LYS CE C N N 111 LYS NZ N N N 112 LYS OXT O N N 113 LYS H H N N 114 LYS H2 H N N 115 LYS HA H N N 116 LYS HB2 H N N 117 LYS HB3 H N N 118 LYS HG2 H N N 119 LYS HG3 H N N 120 LYS HD2 H N N 121 LYS HD3 H N N 122 LYS HE2 H N N 123 LYS HE3 H N N 124 LYS HZ1 H N N 125 LYS HZ2 H N N 126 LYS HZ3 H N N 127 LYS HXT H N N 128 SER N N N N 129 SER CA C N S 130 SER C C N N 131 SER O O N N 132 SER CB C N N 133 SER OG O N N 134 SER OXT O N N 135 SER H H N N 136 SER H2 H N N 137 SER HA H N N 138 SER HB2 H N N 139 SER HB3 H N N 140 SER HG H N N 141 SER HXT H N N 142 TYZ O1 O N N 143 TYZ O2 O N N 144 TYZ C7 C N N 145 TYZ C3 C Y N 146 TYZ C4 C Y N 147 TYZ C5 C Y N 148 TYZ C6 C Y N 149 TYZ C1 C Y N 150 TYZ C2 C Y N 151 TYZ C8 C N N 152 TYZ N N N N 153 TYZ O4 O N N 154 TYZ C9 C N N 155 TYZ H1 H N N 156 TYZ H4 H N N 157 TYZ H5 H N N 158 TYZ HA H N N 159 TYZ H2 H N N 160 TYZ HN H N N 161 TYZ H9C1 H N N 162 TYZ H9C2 H N N 163 TYZ H9C3 H N N 164 VAL N N N N 165 VAL CA C N S 166 VAL C C N N 167 VAL O O N N 168 VAL CB C N N 169 VAL CG1 C N N 170 VAL CG2 C N N 171 VAL OXT O N N 172 VAL H H N N 173 VAL H2 H N N 174 VAL HA H N N 175 VAL HB H N N 176 VAL HG11 H N N 177 VAL HG12 H N N 178 VAL HG13 H N N 179 VAL HG21 H N N 180 VAL HG22 H N N 181 VAL HG23 H N N 182 VAL HXT H N N 183 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 GLU N CA sing N N 39 GLU N H sing N N 40 GLU N H2 sing N N 41 GLU CA C sing N N 42 GLU CA CB sing N N 43 GLU CA HA sing N N 44 GLU C O doub N N 45 GLU C OXT sing N N 46 GLU CB CG sing N N 47 GLU CB HB2 sing N N 48 GLU CB HB3 sing N N 49 GLU CG CD sing N N 50 GLU CG HG2 sing N N 51 GLU CG HG3 sing N N 52 GLU CD OE1 doub N N 53 GLU CD OE2 sing N N 54 GLU OE2 HE2 sing N N 55 GLU OXT HXT sing N N 56 GLY N CA sing N N 57 GLY N H sing N N 58 GLY N H2 sing N N 59 GLY CA C sing N N 60 GLY CA HA2 sing N N 61 GLY CA HA3 sing N N 62 GLY C O doub N N 63 GLY C OXT sing N N 64 GLY OXT HXT sing N N 65 GOA C CA sing N N 66 GOA C O doub N N 67 GOA C OXT sing N N 68 GOA CA O2 sing N N 69 GOA CA H22 sing N N 70 GOA CA H21 sing N N 71 GOA OXT HXT sing N N 72 GOA O2 H20 sing N N 73 HOH O H1 sing N N 74 HOH O H2 sing N N 75 LEU N CA sing N N 76 LEU N H sing N N 77 LEU N H2 sing N N 78 LEU CA C sing N N 79 LEU CA CB sing N N 80 LEU CA HA sing N N 81 LEU C O doub N N 82 LEU C OXT sing N N 83 LEU CB CG sing N N 84 LEU CB HB2 sing N N 85 LEU CB HB3 sing N N 86 LEU CG CD1 sing N N 87 LEU CG CD2 sing N N 88 LEU CG HG sing N N 89 LEU CD1 HD11 sing N N 90 LEU CD1 HD12 sing N N 91 LEU CD1 HD13 sing N N 92 LEU CD2 HD21 sing N N 93 LEU CD2 HD22 sing N N 94 LEU CD2 HD23 sing N N 95 LEU OXT HXT sing N N 96 LYS N CA sing N N 97 LYS N H sing N N 98 LYS N H2 sing N N 99 LYS CA C sing N N 100 LYS CA CB sing N N 101 LYS CA HA sing N N 102 LYS C O doub N N 103 LYS C OXT sing N N 104 LYS CB CG sing N N 105 LYS CB HB2 sing N N 106 LYS CB HB3 sing N N 107 LYS CG CD sing N N 108 LYS CG HG2 sing N N 109 LYS CG HG3 sing N N 110 LYS CD CE sing N N 111 LYS CD HD2 sing N N 112 LYS CD HD3 sing N N 113 LYS CE NZ sing N N 114 LYS CE HE2 sing N N 115 LYS CE HE3 sing N N 116 LYS NZ HZ1 sing N N 117 LYS NZ HZ2 sing N N 118 LYS NZ HZ3 sing N N 119 LYS OXT HXT sing N N 120 SER N CA sing N N 121 SER N H sing N N 122 SER N H2 sing N N 123 SER CA C sing N N 124 SER CA CB sing N N 125 SER CA HA sing N N 126 SER C O doub N N 127 SER C OXT sing N N 128 SER CB OG sing N N 129 SER CB HB2 sing N N 130 SER CB HB3 sing N N 131 SER OG HG sing N N 132 SER OXT HXT sing N N 133 TYZ O1 C7 doub N N 134 TYZ O2 C7 sing N N 135 TYZ O2 H1 sing N N 136 TYZ C7 C3 sing N N 137 TYZ C3 C4 sing Y N 138 TYZ C3 C2 doub Y N 139 TYZ C4 C5 doub Y N 140 TYZ C4 H4 sing N N 141 TYZ C5 C6 sing Y N 142 TYZ C5 H5 sing N N 143 TYZ C6 C1 doub Y N 144 TYZ C6 N sing N N 145 TYZ C1 C2 sing Y N 146 TYZ C1 HA sing N N 147 TYZ C2 H2 sing N N 148 TYZ C8 N sing N N 149 TYZ C8 O4 doub N N 150 TYZ C8 C9 sing N N 151 TYZ N HN sing N N 152 TYZ C9 H9C1 sing N N 153 TYZ C9 H9C2 sing N N 154 TYZ C9 H9C3 sing N N 155 VAL N CA sing N N 156 VAL N H sing N N 157 VAL N H2 sing N N 158 VAL CA C sing N N 159 VAL CA CB sing N N 160 VAL CA HA sing N N 161 VAL C O doub N N 162 VAL C OXT sing N N 163 VAL CB CG1 sing N N 164 VAL CB CG2 sing N N 165 VAL CB HB sing N N 166 VAL CG1 HG11 sing N N 167 VAL CG1 HG12 sing N N 168 VAL CG1 HG13 sing N N 169 VAL CG2 HG21 sing N N 170 VAL CG2 HG22 sing N N 171 VAL CG2 HG23 sing N N 172 VAL OXT HXT sing N N 173 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PARA ACETAMIDO BENZOIC ACID' TYZ 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1IJ2 _pdbx_initial_refinement_model.details ? #