HEADER SIGNALING PROTEIN/ANTIMICROBIAL PROTEIN 15-APR-13 3W9S TITLE CRYSTAL STRUCTURE ANALYSIS OF THE N-TERMINAL RECEIVER DOMAIN OF TITLE 2 RESPONSE REGULATOR PMRA COMPND MOL_ID: 1; COMPND 2 MOLECULE: OMPR FAMILY RESPONSE REGULATOR IN TWO-COMPONENT REGULATORY COMPND 3 SYSTEM WITH BASS; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: UNP RESIDUES 1-123; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE SUBSP. PNEUMONIAE NTUH- SOURCE 3 K2044; SOURCE 4 ORGANISM_TAXID: 484021; SOURCE 5 STRAIN: NTUH-K2044; SOURCE 6 GENE: KP1_1760; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS ALPHA AND BETA PROTEINS, ROSSMANN FOLD TOPOLOGY, POLYMYXIN B KEYWDS 2 RESISTANT PROTEIN A, RESPONSE REGULATOR, SIGNALING PROTEIN- KEYWDS 3 ANTIMICROBIAL PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.CHEN,S.LUO REVDAT 3 08-NOV-23 3W9S 1 REMARK SEQADV LINK REVDAT 2 18-SEP-13 3W9S 1 JRNL REVDAT 1 24-JUL-13 3W9S 0 JRNL AUTH S.C.LOU,Y.C.LOU,M.RAJASEKARAN,Y.W.CHANG,C.D.HSIAO,C.CHEN JRNL TITL STRUCTURAL BASIS OF A PHYSICAL BLOCKAGE MECHANISM FOR THE JRNL TITL 2 INTERACTION OF RESPONSE REGULATOR PMRA WITH CONNECTOR JRNL TITL 3 PROTEIN PMRD FROM KLEBSIELLA PNEUMONIAE JRNL REF J.BIOL.CHEM. V. 288 25551 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 23861396 JRNL DOI 10.1074/JBC.M113.481978 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 38213 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.220 REMARK 3 FREE R VALUE TEST SET COUNT : 1995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.0000 - 4.0871 0.99 2670 151 0.1596 0.1403 REMARK 3 2 4.0871 - 3.2462 1.00 2682 145 0.1507 0.1473 REMARK 3 3 3.2462 - 2.8365 1.00 2653 145 0.1631 0.1767 REMARK 3 4 2.8365 - 2.5774 1.00 2678 147 0.1742 0.2164 REMARK 3 5 2.5774 - 2.3928 1.00 2646 149 0.1723 0.2055 REMARK 3 6 2.3928 - 2.2518 0.99 2644 142 0.1637 0.1725 REMARK 3 7 2.2518 - 2.1391 0.98 2579 144 0.1649 0.1784 REMARK 3 8 2.1391 - 2.0461 0.97 2592 142 0.1675 0.1743 REMARK 3 9 2.0461 - 1.9673 0.95 2521 134 0.1660 0.1647 REMARK 3 10 1.9673 - 1.8995 0.95 2517 130 0.1656 0.2237 REMARK 3 11 1.8995 - 1.8401 0.95 2489 140 0.1718 0.2182 REMARK 3 12 1.8401 - 1.7875 0.96 2558 141 0.1793 0.1804 REMARK 3 13 1.7875 - 1.7405 0.94 2518 145 0.1945 0.2319 REMARK 3 14 1.7405 - 1.7000 0.94 2471 140 0.2007 0.2365 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.340 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1824 REMARK 3 ANGLE : 1.092 2468 REMARK 3 CHIRALITY : 0.076 301 REMARK 3 PLANARITY : 0.004 317 REMARK 3 DIHEDRAL : 12.453 682 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3W9S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-APR-13. REMARK 100 THE DEPOSITION ID IS D_1000096065. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97316 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38222 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 25.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 30.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: 1ZES REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM IMIDAZOLE, 1M SODIUM ACETATE, PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.92950 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.46475 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 109.39425 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 118 REMARK 465 HIS A 119 REMARK 465 ASN A 120 REMARK 465 ASN A 121 REMARK 465 GLN A 122 REMARK 465 GLY A 123 REMARK 465 LEU A 124 REMARK 465 GLU A 125 REMARK 465 HIS A 126 REMARK 465 HIS A 127 REMARK 465 HIS A 128 REMARK 465 HIS A 129 REMARK 465 HIS A 130 REMARK 465 HIS A 131 REMARK 465 MET B 1 REMARK 465 HIS B 119 REMARK 465 ASN B 120 REMARK 465 ASN B 121 REMARK 465 GLN B 122 REMARK 465 GLY B 123 REMARK 465 LEU B 124 REMARK 465 GLU B 125 REMARK 465 HIS B 126 REMARK 465 HIS B 127 REMARK 465 HIS B 128 REMARK 465 HIS B 129 REMARK 465 HIS B 130 REMARK 465 HIS B 131 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 56 CG OD1 OD2 REMARK 470 ARG A 68 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 85 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 323 O HOH B 494 1.81 REMARK 500 O HOH B 447 O HOH B 475 1.83 REMARK 500 O HOH A 333 O HOH A 480 1.86 REMARK 500 O HOH B 470 O HOH B 481 1.88 REMARK 500 O HOH B 304 O HOH B 414 1.95 REMARK 500 O HOH B 349 O HOH B 387 1.97 REMARK 500 O HOH A 454 O HOH A 460 1.99 REMARK 500 N LYS B 2 O HOH B 430 1.99 REMARK 500 O HOH B 461 O HOH B 509 1.99 REMARK 500 O HOH B 514 O HOH B 527 2.02 REMARK 500 OE1 GLU B 106 O HOH B 462 2.03 REMARK 500 O HOH A 448 O HOH B 387 2.03 REMARK 500 O HOH A 335 O HOH A 491 2.06 REMARK 500 O HOH A 325 O HOH A 492 2.06 REMARK 500 O HOH B 500 O HOH B 523 2.07 REMARK 500 OD1 ASP B 58 NH1 ARG B 81 2.07 REMARK 500 O HOH A 302 O HOH A 309 2.08 REMARK 500 O HOH A 374 O HOH A 478 2.09 REMARK 500 O HOH B 348 O HOH B 360 2.09 REMARK 500 O HOH B 482 O HOH B 498 2.09 REMARK 500 O HOH B 394 O HOH B 439 2.10 REMARK 500 O HOH A 308 O HOH A 349 2.11 REMARK 500 OE1 GLU A 106 O HOH A 317 2.12 REMARK 500 N LYS A 2 O HOH A 395 2.13 REMARK 500 OD2 ASP B 92 O HOH B 475 2.14 REMARK 500 O HOH A 466 O HOH A 479 2.14 REMARK 500 O HOH B 315 O HOH B 371 2.16 REMARK 500 O HOH B 392 O HOH B 511 2.17 REMARK 500 O HOH B 429 O HOH B 518 2.17 REMARK 500 OE1 GLU B 69 O HOH B 479 2.17 REMARK 500 OD1 ASP A 58 NH1 ARG A 81 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 484 O HOH B 518 4564 2.06 REMARK 500 O HOH A 491 O HOH B 493 4664 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD2 REMARK 620 2 ASP A 51 OD1 88.1 REMARK 620 3 GLY A 53 O 85.4 88.9 REMARK 620 4 HOH A 301 O 90.5 89.1 175.5 REMARK 620 5 HOH A 380 O 94.2 177.7 91.6 90.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BEF A 201 BE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 51 OD2 REMARK 620 2 BEF A 201 F1 97.5 REMARK 620 3 BEF A 201 F2 95.1 117.5 REMARK 620 4 BEF A 201 F3 95.7 120.0 119.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 8 OD1 REMARK 620 2 ASP B 51 OD2 88.8 REMARK 620 3 GLY B 53 O 84.9 88.6 REMARK 620 4 HOH B 351 O 94.4 176.8 91.6 REMARK 620 5 HOH B 410 O 90.0 88.3 174.1 91.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BEF B 201 BE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 51 OD1 REMARK 620 2 BEF B 201 F1 94.3 REMARK 620 3 BEF B 201 F2 96.4 118.4 REMARK 620 4 BEF B 201 F3 94.3 119.1 120.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEF A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEF B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18922 RELATED DB: BMRB REMARK 900 1H, 13C AND 15N ASSIGNMENTS OF THE DIMERIC RECEIVER DOMAIN OF PMRA REMARK 900 RESPONSE REGULATOR FROM KLEBSIELLA PNEUMONIAE DBREF 3W9S A 1 123 UNP C4X5T7 C4X5T7_KLEPN 1 123 DBREF 3W9S B 1 123 UNP C4X5T7 C4X5T7_KLEPN 1 123 SEQADV 3W9S LEU A 124 UNP C4X5T7 EXPRESSION TAG SEQADV 3W9S GLU A 125 UNP C4X5T7 EXPRESSION TAG SEQADV 3W9S HIS A 126 UNP C4X5T7 EXPRESSION TAG SEQADV 3W9S HIS A 127 UNP C4X5T7 EXPRESSION TAG SEQADV 3W9S HIS A 128 UNP C4X5T7 EXPRESSION TAG SEQADV 3W9S HIS A 129 UNP C4X5T7 EXPRESSION TAG SEQADV 3W9S HIS A 130 UNP C4X5T7 EXPRESSION TAG SEQADV 3W9S HIS A 131 UNP C4X5T7 EXPRESSION TAG SEQADV 3W9S LEU B 124 UNP C4X5T7 EXPRESSION TAG SEQADV 3W9S GLU B 125 UNP C4X5T7 EXPRESSION TAG SEQADV 3W9S HIS B 126 UNP C4X5T7 EXPRESSION TAG SEQADV 3W9S HIS B 127 UNP C4X5T7 EXPRESSION TAG SEQADV 3W9S HIS B 128 UNP C4X5T7 EXPRESSION TAG SEQADV 3W9S HIS B 129 UNP C4X5T7 EXPRESSION TAG SEQADV 3W9S HIS B 130 UNP C4X5T7 EXPRESSION TAG SEQADV 3W9S HIS B 131 UNP C4X5T7 EXPRESSION TAG SEQRES 1 A 131 MET LYS ILE LEU VAL ILE GLU ASP ASP ALA LEU LEU LEU SEQRES 2 A 131 GLN GLY LEU ILE LEU ALA MET GLN SER GLU GLY TYR VAL SEQRES 3 A 131 CYS ASP GLY VAL SER THR ALA HIS GLU ALA ALA LEU SER SEQRES 4 A 131 LEU ALA SER ASN HIS TYR SER LEU ILE VAL LEU ASP LEU SEQRES 5 A 131 GLY LEU PRO ASP GLU ASP GLY LEU HIS PHE LEU SER ARG SEQRES 6 A 131 MET ARG ARG GLU LYS MET THR GLN PRO VAL LEU ILE LEU SEQRES 7 A 131 THR ALA ARG ASP THR LEU GLU ASP ARG ILE SER GLY LEU SEQRES 8 A 131 ASP THR GLY ALA ASP ASP TYR LEU VAL LYS PRO PHE ALA SEQRES 9 A 131 LEU GLU GLU LEU ASN ALA ARG ILE ARG ALA LEU LEU ARG SEQRES 10 A 131 ARG HIS ASN ASN GLN GLY LEU GLU HIS HIS HIS HIS HIS SEQRES 11 A 131 HIS SEQRES 1 B 131 MET LYS ILE LEU VAL ILE GLU ASP ASP ALA LEU LEU LEU SEQRES 2 B 131 GLN GLY LEU ILE LEU ALA MET GLN SER GLU GLY TYR VAL SEQRES 3 B 131 CYS ASP GLY VAL SER THR ALA HIS GLU ALA ALA LEU SER SEQRES 4 B 131 LEU ALA SER ASN HIS TYR SER LEU ILE VAL LEU ASP LEU SEQRES 5 B 131 GLY LEU PRO ASP GLU ASP GLY LEU HIS PHE LEU SER ARG SEQRES 6 B 131 MET ARG ARG GLU LYS MET THR GLN PRO VAL LEU ILE LEU SEQRES 7 B 131 THR ALA ARG ASP THR LEU GLU ASP ARG ILE SER GLY LEU SEQRES 8 B 131 ASP THR GLY ALA ASP ASP TYR LEU VAL LYS PRO PHE ALA SEQRES 9 B 131 LEU GLU GLU LEU ASN ALA ARG ILE ARG ALA LEU LEU ARG SEQRES 10 B 131 ARG HIS ASN ASN GLN GLY LEU GLU HIS HIS HIS HIS HIS SEQRES 11 B 131 HIS HET BEF A 201 4 HET MG A 202 1 HET BEF B 201 4 HET MG B 202 1 HETNAM BEF BERYLLIUM TRIFLUORIDE ION HETNAM MG MAGNESIUM ION FORMUL 3 BEF 2(BE F3 1-) FORMUL 4 MG 2(MG 2+) FORMUL 7 HOH *424(H2 O) HELIX 1 1 ASP A 9 GLU A 23 1 15 HELIX 2 2 THR A 32 ASN A 43 1 12 HELIX 3 3 ASP A 58 GLU A 69 1 12 HELIX 4 4 THR A 83 GLY A 94 1 12 HELIX 5 5 ALA A 104 ARG A 117 1 14 HELIX 6 6 ASP B 9 GLU B 23 1 15 HELIX 7 7 THR B 32 ASN B 43 1 12 HELIX 8 8 ASP B 58 GLU B 69 1 12 HELIX 9 9 THR B 83 GLY B 94 1 12 HELIX 10 10 ALA B 104 ARG B 118 1 15 SHEET 1 A 5 CYS A 27 VAL A 30 0 SHEET 2 A 5 ILE A 3 ILE A 6 1 N VAL A 5 O VAL A 30 SHEET 3 A 5 LEU A 47 LEU A 50 1 O VAL A 49 N LEU A 4 SHEET 4 A 5 VAL A 75 THR A 79 1 O LEU A 76 N LEU A 50 SHEET 5 A 5 ASP A 97 VAL A 100 1 O LEU A 99 N ILE A 77 SHEET 1 B 5 CYS B 27 VAL B 30 0 SHEET 2 B 5 ILE B 3 ILE B 6 1 N VAL B 5 O VAL B 30 SHEET 3 B 5 LEU B 47 LEU B 50 1 O VAL B 49 N LEU B 4 SHEET 4 B 5 VAL B 75 THR B 79 1 O LEU B 76 N LEU B 50 SHEET 5 B 5 ASP B 97 VAL B 100 1 O LEU B 99 N ILE B 77 LINK OD2 ASP A 8 MG MG A 202 1555 1555 2.05 LINK OD2 ASP A 51 BE BEF A 201 1555 1555 1.98 LINK OD1 ASP A 51 MG MG A 202 1555 1555 2.07 LINK O GLY A 53 MG MG A 202 1555 1555 2.12 LINK MG MG A 202 O HOH A 301 1555 1555 2.20 LINK MG MG A 202 O HOH A 380 1555 1555 2.11 LINK OD1 ASP B 8 MG MG B 202 1555 1555 2.04 LINK OD1 ASP B 51 BE BEF B 201 1555 1555 2.01 LINK OD2 ASP B 51 MG MG B 202 1555 1555 2.02 LINK O GLY B 53 MG MG B 202 1555 1555 2.12 LINK MG MG B 202 O HOH B 351 1555 1555 2.08 LINK MG MG B 202 O HOH B 410 1555 1555 2.15 CISPEP 1 LYS A 101 PRO A 102 0 -3.68 CISPEP 2 LYS B 101 PRO B 102 0 -3.76 SITE 1 AC1 11 ASP A 51 LEU A 52 GLY A 53 THR A 79 SITE 2 AC1 11 ALA A 80 LYS A 101 MG A 202 HOH A 301 SITE 3 AC1 11 HOH A 313 HOH A 380 HOH A 472 SITE 1 AC2 6 ASP A 8 ASP A 51 GLY A 53 BEF A 201 SITE 2 AC2 6 HOH A 301 HOH A 380 SITE 1 AC3 11 ASP B 51 LEU B 52 GLY B 53 THR B 79 SITE 2 AC3 11 ALA B 80 LYS B 101 MG B 202 HOH B 351 SITE 3 AC3 11 HOH B 410 HOH B 416 HOH B 422 SITE 1 AC4 6 ASP B 8 ASP B 51 GLY B 53 BEF B 201 SITE 2 AC4 6 HOH B 351 HOH B 410 CRYST1 49.994 49.994 145.859 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020002 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020002 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006856 0.00000