HEADER TRANSFERASE/TRANSCRIPTION 26-DEC-13 3WOE TITLE CRYSTAL STRUCTURE OF P23-45 GP39 (6-109) BOUND TO THERMUS THERMOPHILUS TITLE 2 RNA POLYMERASE BETA-FLAP DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 703-830; COMPND 5 SYNONYM: RNAP SUBUNIT BETA, RNA POLYMERASE SUBUNIT BETA, COMPND 6 TRANSCRIPTASE SUBUNIT BETA; COMPND 7 EC: 2.7.7.6; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 11 CHAIN: B, D; COMPND 12 FRAGMENT: UNP RESIDUES 4-109; COMPND 13 SYNONYM: GP39; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 GENE: RPOB, TTHA1813; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX-6P; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: THERMUS PHAGE P23-45; SOURCE 12 ORGANISM_TAXID: 466051; SOURCE 13 STRAIN: THERMUS PHAGE P23-45; SOURCE 14 GENE: GP39 (P23P39), P23P39; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET-47B KEYWDS TRANSCRIPTION, RNA POLYMERASE, TRANSFERASE-TRANSCRIPTION COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.TAGAMI,S.SEKINE,L.MINAKHIN,D.ESYUNINA,R.AKASAKA,M.SHIROUZU, AUTHOR 2 A.KULBACHINSKIY,K.SEVERINOV,S.YOKOYAMA REVDAT 3 06-NOV-24 3WOE 1 SEQADV LINK REVDAT 2 25-MAR-15 3WOE 1 JRNL REVDAT 1 12-MAR-14 3WOE 0 JRNL AUTH S.TAGAMI,S.SEKINE,L.MINAKHIN,D.ESYUNINA,R.AKASAKA, JRNL AUTH 2 M.SHIROUZU,A.KULBACHINSKIY,K.SEVERINOV,S.YOKOYAMA JRNL TITL STRUCTURAL BASIS FOR PROMOTER SPECIFICITY SWITCHING OF RNA JRNL TITL 2 POLYMERASE BY A PHAGE FACTOR. JRNL REF GENES DEV. V. 28 521 2014 JRNL REFN ISSN 0890-9369 JRNL PMID 24589779 JRNL DOI 10.1101/GAD.233916.113 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 24861 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.140 REMARK 3 FREE R VALUE TEST SET COUNT : 2380 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.6270 - 6.0410 0.99 2593 124 0.1925 0.1709 REMARK 3 2 6.0410 - 4.7962 0.99 2577 138 0.1734 0.2206 REMARK 3 3 4.7962 - 4.1903 1.00 2583 149 0.1450 0.1549 REMARK 3 4 4.1903 - 3.8073 1.00 2592 120 0.1637 0.2061 REMARK 3 5 3.8073 - 3.5345 1.00 2573 167 0.1726 0.2101 REMARK 3 6 3.5345 - 3.3262 1.00 2585 136 0.1848 0.2549 REMARK 3 7 3.3262 - 3.1596 1.00 2611 141 0.1964 0.2298 REMARK 3 8 3.1596 - 3.0221 1.00 2601 128 0.1801 0.2619 REMARK 3 9 3.0221 - 2.9058 1.00 2594 132 0.1721 0.1927 REMARK 3 10 2.9058 - 2.8055 1.00 2598 138 0.1710 0.2775 REMARK 3 11 2.8055 - 2.7178 1.00 2598 174 0.1986 0.2712 REMARK 3 12 2.7178 - 2.6401 1.00 2558 153 0.2102 0.3020 REMARK 3 13 2.6401 - 2.5706 1.00 2602 137 0.2100 0.3179 REMARK 3 14 2.5706 - 2.5079 1.00 2552 145 0.2069 0.2808 REMARK 3 15 2.5079 - 2.4509 1.00 2631 154 0.2063 0.2644 REMARK 3 16 2.4509 - 2.3987 1.00 2578 132 0.2154 0.2626 REMARK 3 17 2.3987 - 2.3508 0.97 2540 112 0.2227 0.2639 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.960 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3812 REMARK 3 ANGLE : 1.062 5170 REMARK 3 CHIRALITY : 0.071 568 REMARK 3 PLANARITY : 0.005 684 REMARK 3 DIHEDRAL : 15.398 1486 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 47.2311 19.7441 40.6525 REMARK 3 T TENSOR REMARK 3 T11: 0.1819 T22: 0.1539 REMARK 3 T33: 0.1524 T12: -0.0135 REMARK 3 T13: 0.0013 T23: 0.0182 REMARK 3 L TENSOR REMARK 3 L11: 3.8740 L22: 3.3676 REMARK 3 L33: 1.2530 L12: -1.0265 REMARK 3 L13: -0.5045 L23: 0.4637 REMARK 3 S TENSOR REMARK 3 S11: 0.0636 S12: -0.0287 S13: -0.3331 REMARK 3 S21: -0.0293 S22: -0.0438 S23: 0.1581 REMARK 3 S31: -0.0317 S32: -0.1406 S33: 0.0102 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 43.8119 42.1177 44.1661 REMARK 3 T TENSOR REMARK 3 T11: 0.1968 T22: 0.1587 REMARK 3 T33: 0.1658 T12: -0.0174 REMARK 3 T13: -0.0292 T23: 0.0198 REMARK 3 L TENSOR REMARK 3 L11: 3.6395 L22: 3.2027 REMARK 3 L33: 1.6312 L12: -1.4970 REMARK 3 L13: -0.6635 L23: 0.0579 REMARK 3 S TENSOR REMARK 3 S11: 0.0505 S12: 0.0665 S13: 0.1909 REMARK 3 S21: -0.0430 S22: -0.0424 S23: -0.0904 REMARK 3 S31: -0.0918 S32: -0.0209 S33: -0.0164 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 50.7663 -29.5575 47.0212 REMARK 3 T TENSOR REMARK 3 T11: 0.1866 T22: 0.1602 REMARK 3 T33: 0.1518 T12: 0.0321 REMARK 3 T13: 0.0200 T23: -0.0132 REMARK 3 L TENSOR REMARK 3 L11: 3.6449 L22: 3.0646 REMARK 3 L33: 1.3944 L12: 1.5313 REMARK 3 L13: -0.1241 L23: -0.9489 REMARK 3 S TENSOR REMARK 3 S11: -0.0412 S12: -0.1430 S13: -0.2627 REMARK 3 S21: -0.0041 S22: -0.0120 S23: -0.1945 REMARK 3 S31: -0.0504 S32: 0.1616 S33: 0.0664 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): 54.0624 -7.3857 41.9676 REMARK 3 T TENSOR REMARK 3 T11: 0.1560 T22: 0.1524 REMARK 3 T33: 0.1866 T12: 0.0332 REMARK 3 T13: 0.0052 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 2.8879 L22: 3.4786 REMARK 3 L33: 2.4530 L12: 0.9751 REMARK 3 L13: -0.8084 L23: -0.6957 REMARK 3 S TENSOR REMARK 3 S11: 0.0501 S12: -0.0523 S13: 0.2500 REMARK 3 S21: -0.0709 S22: -0.0322 S23: -0.2562 REMARK 3 S31: -0.0805 S32: 0.0586 S33: -0.0354 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE ENTRY CONTAINS FRIEDEL PAIRS IN F_ REMARK 3 PLUS/MINUS COLUMNS REMARK 4 REMARK 4 3WOE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000096589. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JAN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9780 REMARK 200 MONOCHROMATOR : LIQUID NITROGEN COOLED DOUBLE REMARK 200 CRYSTAL, SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24886 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 6.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 17.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.14000 REMARK 200 FOR THE DATA SET : 19.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MRSAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN F_PLUS/MINUS COLUMNS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM TRIS-HCL (PH 8.0), 12% PEG 8000, REMARK 280 8% 2-PROPANOL, 3% 1,6-HEXANEDIOL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.59500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 49.61600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 49.61600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.29750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 49.61600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 49.61600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 87.89250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 49.61600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.61600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 29.29750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 49.61600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.61600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 87.89250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 58.59500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 4 REMARK 465 PRO B 5 REMARK 465 GLY D 4 REMARK 465 PRO D 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG C 820 O HOH C 926 2.08 REMARK 500 OD2 ASP A 810 O HOH A 927 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 738 -178.72 -66.23 REMARK 500 LYS B 60 -138.93 -109.15 REMARK 500 HIS B 75 74.66 -104.56 REMARK 500 VAL B 76 -161.60 -78.05 REMARK 500 ALA C 782 49.66 -93.62 REMARK 500 LYS D 60 -151.10 -106.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WOD RELATED DB: PDB REMARK 900 RELATED ID: 3WOF RELATED DB: PDB DBREF 3WOE A 703 830 UNP Q8RQE9 RPOB_THET8 703 830 DBREF 3WOE B 6 109 UNP A7XX65 A7XX65_9CAUD 6 109 DBREF 3WOE C 703 830 UNP Q8RQE9 RPOB_THET8 703 830 DBREF 3WOE D 6 109 UNP A7XX65 A7XX65_9CAUD 6 109 SEQADV 3WOE GLY A 701 UNP Q8RQE9 EXPRESSION TAG SEQADV 3WOE PRO A 702 UNP Q8RQE9 EXPRESSION TAG SEQADV 3WOE GLY B 4 UNP A7XX65 EXPRESSION TAG SEQADV 3WOE PRO B 5 UNP A7XX65 EXPRESSION TAG SEQADV 3WOE GLY C 701 UNP Q8RQE9 EXPRESSION TAG SEQADV 3WOE PRO C 702 UNP Q8RQE9 EXPRESSION TAG SEQADV 3WOE GLY D 4 UNP A7XX65 EXPRESSION TAG SEQADV 3WOE PRO D 5 UNP A7XX65 EXPRESSION TAG SEQRES 1 A 130 GLY PRO ILE HIS ILE GLU ARG TYR GLU ILE GLU ALA ARG SEQRES 2 A 130 ASP THR LYS LEU GLY PRO GLU ARG ILE THR ARG ASP ILE SEQRES 3 A 130 PRO HIS LEU SER GLU ALA ALA LEU ARG ASP LEU ASP GLU SEQRES 4 A 130 GLU GLY VAL VAL ARG ILE GLY ALA GLU VAL LYS PRO GLY SEQRES 5 A 130 ASP ILE LEU VAL GLY ARG THR SER PHE LYS GLY GLU SER SEQRES 6 A 130 GLU PRO THR PRO GLU GLU ARG LEU LEU ARG SER ILE PHE SEQRES 7 A 130 GLY GLU LYS ALA ARG ASP VAL LYS ASP THR SER LEU ARG SEQRES 8 A 130 VAL PRO PRO GLY GLU GLY GLY ILE VAL VAL ARG THR VAL SEQRES 9 A 130 ARG LEU ARG ARG GLY ASP PRO GLY VAL GLU LEU LYS PRO SEQRES 10 A 130 GLY VAL ARG GLU VAL VAL ARG VAL TYR VAL ALA GLN LYS SEQRES 1 B 106 GLY PRO VAL GLU PRO TYR ILE ARG LEU PHE GLU ALA ILE SEQRES 2 B 106 PRO ASP ALA GLU THR GLU LEU ALA THR PHE TYR ASP ALA SEQRES 3 B 106 ASP LEU ASP THR LEU PRO PRO ARG MSE PHE LEU PRO SER SEQRES 4 B 106 GLY ASP LEU TYR THR PRO PRO GLY PRO VAL ARG LEU GLU SEQRES 5 B 106 GLU ILE LYS ARG LYS ARG ARG VAL ARG LEU VAL LYS VAL SEQRES 6 B 106 SER ILE TYR ARG PHE GLU HIS VAL GLY LEU GLY LEU ALA SEQRES 7 B 106 ALA ARG PRO TYR ALA TYR ALA TYR ALA TRP GLN GLY ASP SEQRES 8 B 106 ASN GLY ILE LEU HIS LEU TYR HIS ALA PRO VAL VAL LEU SEQRES 9 B 106 GLU ASP SEQRES 1 C 130 GLY PRO ILE HIS ILE GLU ARG TYR GLU ILE GLU ALA ARG SEQRES 2 C 130 ASP THR LYS LEU GLY PRO GLU ARG ILE THR ARG ASP ILE SEQRES 3 C 130 PRO HIS LEU SER GLU ALA ALA LEU ARG ASP LEU ASP GLU SEQRES 4 C 130 GLU GLY VAL VAL ARG ILE GLY ALA GLU VAL LYS PRO GLY SEQRES 5 C 130 ASP ILE LEU VAL GLY ARG THR SER PHE LYS GLY GLU SER SEQRES 6 C 130 GLU PRO THR PRO GLU GLU ARG LEU LEU ARG SER ILE PHE SEQRES 7 C 130 GLY GLU LYS ALA ARG ASP VAL LYS ASP THR SER LEU ARG SEQRES 8 C 130 VAL PRO PRO GLY GLU GLY GLY ILE VAL VAL ARG THR VAL SEQRES 9 C 130 ARG LEU ARG ARG GLY ASP PRO GLY VAL GLU LEU LYS PRO SEQRES 10 C 130 GLY VAL ARG GLU VAL VAL ARG VAL TYR VAL ALA GLN LYS SEQRES 1 D 106 GLY PRO VAL GLU PRO TYR ILE ARG LEU PHE GLU ALA ILE SEQRES 2 D 106 PRO ASP ALA GLU THR GLU LEU ALA THR PHE TYR ASP ALA SEQRES 3 D 106 ASP LEU ASP THR LEU PRO PRO ARG MSE PHE LEU PRO SER SEQRES 4 D 106 GLY ASP LEU TYR THR PRO PRO GLY PRO VAL ARG LEU GLU SEQRES 5 D 106 GLU ILE LYS ARG LYS ARG ARG VAL ARG LEU VAL LYS VAL SEQRES 6 D 106 SER ILE TYR ARG PHE GLU HIS VAL GLY LEU GLY LEU ALA SEQRES 7 D 106 ALA ARG PRO TYR ALA TYR ALA TYR ALA TRP GLN GLY ASP SEQRES 8 D 106 ASN GLY ILE LEU HIS LEU TYR HIS ALA PRO VAL VAL LEU SEQRES 9 D 106 GLU ASP MODRES 3WOE MSE B 38 MET SELENOMETHIONINE MODRES 3WOE MSE D 38 MET SELENOMETHIONINE HET MSE B 38 8 HET MSE D 38 8 HETNAM MSE SELENOMETHIONINE FORMUL 2 MSE 2(C5 H11 N O2 SE) FORMUL 5 HOH *101(H2 O) HELIX 1 1 SER A 730 ARG A 735 1 6 HELIX 2 2 THR A 768 GLY A 779 1 12 HELIX 3 3 GLU B 7 ALA B 15 1 9 HELIX 4 4 SER C 730 ARG C 735 1 6 HELIX 5 5 THR C 768 GLY C 779 1 12 HELIX 6 6 GLU D 7 ALA D 15 1 9 SHEET 1 A 7 GLU A 748 VAL A 749 0 SHEET 2 A 7 GLY A 798 ARG A 807 -1 O GLY A 798 N VAL A 749 SHEET 3 A 7 VAL A 819 GLN A 829 -1 O ARG A 824 N VAL A 804 SHEET 4 A 7 ILE A 703 ARG A 713 -1 N ALA A 712 O ARG A 820 SHEET 5 A 7 LEU D 80 GLN D 92 1 O LEU D 80 N ILE A 703 SHEET 6 A 7 ARG D 64 HIS D 75 -1 N GLU D 74 O ALA D 81 SHEET 7 A 7 VAL D 52 ARG D 59 -1 N ARG D 53 O SER D 69 SHEET 1 B 5 LEU D 45 TYR D 46 0 SHEET 2 B 5 MSE D 38 PHE D 39 -1 N MSE D 38 O TYR D 46 SHEET 3 B 5 LEU D 98 LEU D 100 1 O LEU D 98 N PHE D 39 SHEET 4 B 5 LEU D 80 GLN D 92 -1 N TRP D 91 O HIS D 99 SHEET 5 B 5 VAL D 105 VAL D 106 -1 O VAL D 105 N TYR D 87 SHEET 1 C 3 ARG A 721 ILE A 722 0 SHEET 2 C 3 ARG A 758 PHE A 761 -1 O THR A 759 N ARG A 721 SHEET 3 C 3 VAL A 785 ASP A 787 -1 O LYS A 786 N SER A 760 SHEET 1 D 2 ILE A 754 VAL A 756 0 SHEET 2 D 2 LEU A 790 ARG A 791 -1 O LEU A 790 N LEU A 755 SHEET 1 E 6 LEU B 45 TYR B 46 0 SHEET 2 E 6 MSE B 38 PHE B 39 -1 N MSE B 38 O TYR B 46 SHEET 3 E 6 LEU B 98 LEU B 100 1 O LEU B 100 N PHE B 39 SHEET 4 E 6 GLY B 79 GLN B 92 -1 N TRP B 91 O HIS B 99 SHEET 5 E 6 ARG B 64 VAL B 76 -1 N ILE B 70 O ALA B 86 SHEET 6 E 6 VAL B 52 ARG B 59 -1 N ILE B 57 O LEU B 65 SHEET 1 F 5 LEU B 45 TYR B 46 0 SHEET 2 F 5 MSE B 38 PHE B 39 -1 N MSE B 38 O TYR B 46 SHEET 3 F 5 LEU B 98 LEU B 100 1 O LEU B 100 N PHE B 39 SHEET 4 F 5 GLY B 79 GLN B 92 -1 N TRP B 91 O HIS B 99 SHEET 5 F 5 VAL B 105 VAL B 106 -1 O VAL B 105 N TYR B 87 SHEET 1 G 4 ILE C 705 ARG C 713 0 SHEET 2 G 4 VAL C 819 GLN C 829 -1 O GLU C 821 N ALA C 712 SHEET 3 G 4 GLY C 798 ARG C 807 -1 N ARG C 802 O TYR C 826 SHEET 4 G 4 GLU C 748 VAL C 749 -1 N VAL C 749 O GLY C 798 SHEET 1 H 3 ARG C 721 ILE C 722 0 SHEET 2 H 3 ARG C 758 PHE C 761 -1 O THR C 759 N ARG C 721 SHEET 3 H 3 VAL C 785 ASP C 787 -1 O LYS C 786 N SER C 760 SHEET 1 I 2 ILE C 754 VAL C 756 0 SHEET 2 I 2 LEU C 790 ARG C 791 -1 O LEU C 790 N LEU C 755 LINK C ARG B 37 N MSE B 38 1555 1555 1.33 LINK C MSE B 38 N PHE B 39 1555 1555 1.33 LINK C ARG D 37 N MSE D 38 1555 1555 1.33 LINK C MSE D 38 N PHE D 39 1555 1555 1.33 CRYST1 99.232 99.232 117.190 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010077 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010077 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008533 0.00000