HEADER HYDROLASE 29-DEC-13 3WOI TITLE CRYSTAL STRUCTURE OF THE DAP BII (S657A) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIPEPTIDYL AMINOPEPTIDASE BII; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DAP BII; COMPND 5 EC: 3.4.14.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOXANTHOMONAS MEXICANA; SOURCE 3 ORGANISM_TAXID: 128785; SOURCE 4 STRAIN: WO24; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3)PLACI; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS CHYMOTRYPSIN FOLD, S46 PEPTIDASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.SAKAMOTO,Y.SUZUKI,I.IIZUKA,C.TATEOKA,S.ROPPONGI,M.FUJIMOTO, AUTHOR 2 T.NONAKA,W.OGASAWARA,N.TANAKA REVDAT 1 03-SEP-14 3WOI 0 JRNL AUTH Y.SAKAMOTO,Y.SUZUKI,I.IIZUKA,C.TATEOKA,S.ROPPONGI, JRNL AUTH 2 M.FUJIMOTO,K.INAKA,H.TANAKA,M.MASAKI,K.OHTA,H.OKADA, JRNL AUTH 3 T.NONAKA,Y.MORIKAWA,K.T.NAKAMURA,W.OGASAWARA,N.TANAKA JRNL TITL S46 PEPTIDASES ARE THE FIRST EXOPEPTIDASES TO BE MEMBERS OF JRNL TITL 2 CLAN PA JRNL REF SCI REP V. 4 4977 2014 JRNL REFN ESSN 2045-2322 JRNL PMID 24827749 JRNL DOI 10.1038/SREP04977 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 90336 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4754 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5648 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.19 REMARK 3 BIN R VALUE (WORKING SET) : 0.1980 REMARK 3 BIN FREE R VALUE SET COUNT : 315 REMARK 3 BIN FREE R VALUE : 0.2630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10734 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 1008 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.11000 REMARK 3 B22 (A**2) : 0.11000 REMARK 3 B33 (A**2) : -0.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.175 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.158 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.102 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.803 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 11009 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 10456 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 14915 ; 1.858 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 24018 ; 0.869 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1392 ; 6.694 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 508 ;37.290 ;24.409 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1710 ;15.660 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 70 ;11.472 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1597 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 12714 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 2528 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5574 ; 2.762 ; 3.101 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 5573 ; 2.753 ; 3.101 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6964 ; 3.707 ; 4.640 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 6965 ; 3.707 ; 4.640 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 5435 ; 4.071 ; 3.542 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 5435 ; 4.071 ; 3.543 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 7952 ; 6.055 ; 5.110 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 13627 ; 7.526 ;26.452 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 13225 ; 7.389 ;26.113 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3WOI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-JAN-14. REMARK 100 THE RCSB ID CODE IS RCSB096593. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97897 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 90336 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG8000, 20% GLYCEROL, 2MM ZNCL2, REMARK 280 80MM CHES, PH 9.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 113.39000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 59.95000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 59.95000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 170.08500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 59.95000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 59.95000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 56.69500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 59.95000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 59.95000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 170.08500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 59.95000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 59.95000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 56.69500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 113.39000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 113.39000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1083 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 722 REMARK 465 LYS B 722 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MSE A 325 CG SE CE REMARK 470 MSE B 325 CG SE CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 707 O HOH B 1572 1.88 REMARK 500 O HOH A 1189 O HOH A 1190 2.01 REMARK 500 O HOH B 1489 O HOH B 1490 2.01 REMARK 500 O HOH B 1455 O HOH B 1503 2.02 REMARK 500 O HOH B 1473 O HOH B 1514 2.03 REMARK 500 O HOH A 1097 O HOH A 1196 2.06 REMARK 500 O HOH B 1208 O HOH B 1562 2.07 REMARK 500 O HOH B 1513 O HOH B 1567 2.08 REMARK 500 O HOH B 1526 O HOH B 1527 2.09 REMARK 500 O HOH B 1498 O HOH B 1580 2.12 REMARK 500 O HOH B 1235 O HOH B 1252 2.14 REMARK 500 O HOH B 1390 O HOH B 1553 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1129 O HOH B 984 6545 1.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 308 CG GLU B 308 CD 0.091 REMARK 500 GLU B 308 CD GLU B 308 OE2 0.131 REMARK 500 TYR B 429 CE1 TYR B 429 CZ -0.080 REMARK 500 GLU B 504 CG GLU B 504 CD 0.090 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MSE A 217 CG - SE - CE ANGL. DEV. = 14.5 DEGREES REMARK 500 MSE A 452 CG - SE - CE ANGL. DEV. = -14.4 DEGREES REMARK 500 ARG B 151 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 151 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 MSE B 217 CG - SE - CE ANGL. DEV. = -23.4 DEGREES REMARK 500 ASP B 381 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG B 494 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 638 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 144 49.74 147.80 REMARK 500 ASP A 146 -42.30 41.18 REMARK 500 SER A 242 136.51 -170.93 REMARK 500 ASN A 277 55.89 -142.12 REMARK 500 TRP A 291 -64.22 -121.49 REMARK 500 LYS A 312 38.47 -79.81 REMARK 500 GLN A 313 28.33 151.27 REMARK 500 ASN A 400 2.36 -69.36 REMARK 500 LEU A 467 155.37 -49.96 REMARK 500 ASN A 483 30.56 -161.38 REMARK 500 ASN A 576 32.14 -153.30 REMARK 500 LEU A 577 -5.72 73.12 REMARK 500 PHE A 616 53.70 -118.79 REMARK 500 ASP A 649 35.96 -85.99 REMARK 500 ASN A 719 30.67 71.59 REMARK 500 ASP B 146 58.20 -102.13 REMARK 500 TRP B 291 -56.80 -128.27 REMARK 500 ASN B 576 33.68 -146.14 REMARK 500 PHE B 616 56.27 -109.59 REMARK 500 VAL B 644 -66.31 -108.25 REMARK 500 ASP B 649 36.98 -90.30 REMARK 500 PHE B 673 -19.58 -141.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN A 313 ASN A 314 63.09 REMARK 500 THR A 611 GLY A 612 -54.56 REMARK 500 GLY A 612 GLN A 613 144.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1194 DISTANCE = 5.15 ANGSTROMS REMARK 525 HOH A1206 DISTANCE = 5.47 ANGSTROMS REMARK 525 HOH B1493 DISTANCE = 8.42 ANGSTROMS REMARK 525 HOH B1500 DISTANCE = 5.11 ANGSTROMS REMARK 525 HOH B1505 DISTANCE = 5.39 ANGSTROMS REMARK 525 HOH B1534 DISTANCE = 5.42 ANGSTROMS REMARK 525 HOH B1557 DISTANCE = 6.87 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 807 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 147 OD2 REMARK 620 2 HOH B1480 O 126.8 REMARK 620 3 HOH B1587 O 108.7 101.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 804 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 59 OD2 REMARK 620 2 HOH A1212 O 111.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 806 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 252 ND1 REMARK 620 2 ASP B 59 OD2 105.4 REMARK 620 3 ASP B 59 OD1 93.4 56.7 REMARK 620 4 HOH B1479 O 127.5 118.4 87.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 805 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 635 OE1 REMARK 620 2 GLU A 635 OE2 54.9 REMARK 620 3 HOH A1214 O 75.3 130.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 808 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 674 OD1 REMARK 620 2 ASN B 215 OD1 105.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 803 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1187 O REMARK 620 2 HOH A1186 O 118.8 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 805 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 805 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 806 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 807 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 808 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WOJ RELATED DB: PDB REMARK 900 RELATED ID: 3WOK RELATED DB: PDB REMARK 900 RELATED ID: 3WOL RELATED DB: PDB REMARK 900 RELATED ID: 3WOM RELATED DB: PDB REMARK 900 RELATED ID: 3WON RELATED DB: PDB REMARK 900 RELATED ID: 3WOO RELATED DB: PDB REMARK 900 RELATED ID: 3WOP RELATED DB: PDB REMARK 900 RELATED ID: 3WOQ RELATED DB: PDB REMARK 900 RELATED ID: 3WOR RELATED DB: PDB DBREF 3WOI A 25 722 UNP V5YM14 V5YM14_9GAMM 25 722 DBREF 3WOI B 25 722 UNP V5YM14 V5YM14_9GAMM 25 722 SEQADV 3WOI ALA A 657 UNP V5YM14 SER 657 ENGINEERED MUTATION SEQADV 3WOI ALA B 657 UNP V5YM14 SER 657 ENGINEERED MUTATION SEQRES 1 A 698 GLY GLU GLY MSE TRP VAL PRO GLN GLN LEU PRO GLU ILE SEQRES 2 A 698 ALA GLY PRO LEU LYS LYS ALA GLY LEU LYS LEU SER PRO SEQRES 3 A 698 GLN GLN ILE SER ASP LEU THR GLY ASP PRO MSE GLY ALA SEQRES 4 A 698 VAL VAL ALA LEU GLY GLY CYS THR ALA SER PHE VAL SER SEQRES 5 A 698 PRO ASN GLY LEU VAL VAL THR ASN HIS HIS CYS ALA TYR SEQRES 6 A 698 GLY ALA ILE GLN LEU ASN SER THR ALA GLU ASN ASN LEU SEQRES 7 A 698 ILE LYS ASN GLY PHE ASN ALA PRO THR THR ALA ASP GLU SEQRES 8 A 698 VAL SER ALA GLY PRO ASN ALA ARG VAL PHE VAL LEU ASP SEQRES 9 A 698 GLU ILE THR ASP VAL THR LYS ASP ALA LYS ALA ALA ILE SEQRES 10 A 698 ALA ALA ALA GLY ASP ASP ALA LEU ALA ARG THR LYS ALA SEQRES 11 A 698 LEU GLU ALA PHE GLU LYS LYS LEU ILE ALA ASP CYS GLU SEQRES 12 A 698 ALA GLU ALA GLY PHE ARG CYS ARG LEU TYR SER PHE SER SEQRES 13 A 698 GLY GLY ASN THR TYR ARG LEU PHE LYS ASN LEU GLU ILE SEQRES 14 A 698 LYS ASP VAL ARG LEU ALA TYR ALA PRO PRO GLY SER VAL SEQRES 15 A 698 GLY LYS PHE GLY GLY ASP ILE ASP ASN TRP MSE TRP PRO SEQRES 16 A 698 ARG HIS THR GLY ASP PHE ALA PHE TYR ARG ALA TYR VAL SEQRES 17 A 698 GLY LYS ASP GLY LYS PRO ALA ALA PHE SER LYS ASP ASN SEQRES 18 A 698 VAL PRO TYR GLN PRO LYS HIS TRP LEU LYS PHE ALA ASP SEQRES 19 A 698 GLN PRO LEU GLY ALA GLY ASP PHE VAL MSE VAL ALA GLY SEQRES 20 A 698 TYR PRO GLY SER THR ASN ARG TYR ALA LEU ALA ALA GLU SEQRES 21 A 698 PHE ASP ASN THR ALA GLN TRP THR TYR PRO THR ILE ALA SEQRES 22 A 698 ARG HIS TYR LYS ASN GLN ILE ALA MSE VAL GLU ALA ALA SEQRES 23 A 698 GLY LYS GLN ASN ALA ASP ILE GLN VAL LYS TYR ALA ALA SEQRES 24 A 698 THR MSE ALA GLY TRP ASN ASN THR SER LYS ASN TYR ASP SEQRES 25 A 698 GLY GLN LEU GLU GLY PHE LYS ARG ILE ASP ALA ALA GLY SEQRES 26 A 698 GLN LYS LEU ARG GLU GLU ALA ALA VAL LEU GLY TRP LEU SEQRES 27 A 698 LYS GLY GLN GLY ALA LYS GLY GLN PRO ALA LEU ASP ALA SEQRES 28 A 698 HIS ALA LYS LEU LEU ASP LEU LEU GLU GLN SER LYS ALA SEQRES 29 A 698 THR ARG ASP ARG ASP LEU THR LEU ALA LEU PHE ASN ASN SEQRES 30 A 698 THR ALA MSE LEU GLY SER ALA THR GLN LEU TYR ARG LEU SEQRES 31 A 698 SER ILE GLU ARG GLU LYS PRO ASN ALA GLU ARG GLU SER SEQRES 32 A 698 GLY TYR GLN GLU ARG ASP LEU PRO ALA ILE GLU GLY GLY SEQRES 33 A 698 LEU LYS GLN LEU GLU ARG ARG TYR VAL ALA ALA MSE ASP SEQRES 34 A 698 ARG GLN LEU GLN GLU TYR TRP LEU ASN GLU TYR ILE LYS SEQRES 35 A 698 LEU PRO ALA ASP GLN ARG VAL ALA ALA VAL ASP ALA TRP SEQRES 36 A 698 LEU GLY GLY ASN ASP ALA ALA ALA VAL LYS ARG ALA LEU SEQRES 37 A 698 ASP ARG LEU ALA GLY THR LYS LEU GLY SER THR GLU GLU SEQRES 38 A 698 ARG LEU LYS TRP PHE ALA ALA ASP ARG LYS ALA PHE GLU SEQRES 39 A 698 ALA SER ASN ASP PRO ALA ILE GLN TYR ALA VAL ALA VAL SEQRES 40 A 698 MSE PRO THR LEU LEU LYS LEU GLU GLN GLU ARG LYS THR SEQRES 41 A 698 ARG ALA GLY GLU ASN LEU ALA ALA ARG PRO VAL TYR LEU SEQRES 42 A 698 GLN ALA LEU ALA ASP TYR LYS LYS SER GLN GLY GLU PHE SEQRES 43 A 698 VAL TYR PRO ASP ALA ASN LEU SER LEU ARG ILE THR PHE SEQRES 44 A 698 GLY ASN VAL MSE GLY TYR ALA PRO LYS ASP GLY MSE GLU SEQRES 45 A 698 TYR THR PRO PHE THR THR LEU GLU GLY VAL VAL ALA LYS SEQRES 46 A 698 GLU THR GLY GLN ASP PRO PHE ASP SER PRO LYS ALA LEU SEQRES 47 A 698 LEU ASP ALA VAL ALA ALA LYS ARG TYR GLY GLY LEU GLU SEQRES 48 A 698 ASP LYS ARG ILE GLY SER VAL PRO VAL ASN TYR LEU SER SEQRES 49 A 698 ASP LEU ASP ILE THR GLY GLY ASN ALA GLY SER PRO VAL SEQRES 50 A 698 LEU ASP ALA HIS GLY LYS LEU VAL GLY LEU ALA PHE ASP SEQRES 51 A 698 GLY ASN TRP GLU SER VAL SER SER ASN TRP VAL PHE ASP SEQRES 52 A 698 PRO LYS MSE THR ARG MSE ILE ALA VAL ASP GLY ARG TYR SEQRES 53 A 698 LEU ARG TRP ILE MSE GLN GLU VAL TYR PRO ALA PRO GLN SEQRES 54 A 698 LEU LEU LYS GLU MSE ASN VAL GLY LYS SEQRES 1 B 698 GLY GLU GLY MSE TRP VAL PRO GLN GLN LEU PRO GLU ILE SEQRES 2 B 698 ALA GLY PRO LEU LYS LYS ALA GLY LEU LYS LEU SER PRO SEQRES 3 B 698 GLN GLN ILE SER ASP LEU THR GLY ASP PRO MSE GLY ALA SEQRES 4 B 698 VAL VAL ALA LEU GLY GLY CYS THR ALA SER PHE VAL SER SEQRES 5 B 698 PRO ASN GLY LEU VAL VAL THR ASN HIS HIS CYS ALA TYR SEQRES 6 B 698 GLY ALA ILE GLN LEU ASN SER THR ALA GLU ASN ASN LEU SEQRES 7 B 698 ILE LYS ASN GLY PHE ASN ALA PRO THR THR ALA ASP GLU SEQRES 8 B 698 VAL SER ALA GLY PRO ASN ALA ARG VAL PHE VAL LEU ASP SEQRES 9 B 698 GLU ILE THR ASP VAL THR LYS ASP ALA LYS ALA ALA ILE SEQRES 10 B 698 ALA ALA ALA GLY ASP ASP ALA LEU ALA ARG THR LYS ALA SEQRES 11 B 698 LEU GLU ALA PHE GLU LYS LYS LEU ILE ALA ASP CYS GLU SEQRES 12 B 698 ALA GLU ALA GLY PHE ARG CYS ARG LEU TYR SER PHE SER SEQRES 13 B 698 GLY GLY ASN THR TYR ARG LEU PHE LYS ASN LEU GLU ILE SEQRES 14 B 698 LYS ASP VAL ARG LEU ALA TYR ALA PRO PRO GLY SER VAL SEQRES 15 B 698 GLY LYS PHE GLY GLY ASP ILE ASP ASN TRP MSE TRP PRO SEQRES 16 B 698 ARG HIS THR GLY ASP PHE ALA PHE TYR ARG ALA TYR VAL SEQRES 17 B 698 GLY LYS ASP GLY LYS PRO ALA ALA PHE SER LYS ASP ASN SEQRES 18 B 698 VAL PRO TYR GLN PRO LYS HIS TRP LEU LYS PHE ALA ASP SEQRES 19 B 698 GLN PRO LEU GLY ALA GLY ASP PHE VAL MSE VAL ALA GLY SEQRES 20 B 698 TYR PRO GLY SER THR ASN ARG TYR ALA LEU ALA ALA GLU SEQRES 21 B 698 PHE ASP ASN THR ALA GLN TRP THR TYR PRO THR ILE ALA SEQRES 22 B 698 ARG HIS TYR LYS ASN GLN ILE ALA MSE VAL GLU ALA ALA SEQRES 23 B 698 GLY LYS GLN ASN ALA ASP ILE GLN VAL LYS TYR ALA ALA SEQRES 24 B 698 THR MSE ALA GLY TRP ASN ASN THR SER LYS ASN TYR ASP SEQRES 25 B 698 GLY GLN LEU GLU GLY PHE LYS ARG ILE ASP ALA ALA GLY SEQRES 26 B 698 GLN LYS LEU ARG GLU GLU ALA ALA VAL LEU GLY TRP LEU SEQRES 27 B 698 LYS GLY GLN GLY ALA LYS GLY GLN PRO ALA LEU ASP ALA SEQRES 28 B 698 HIS ALA LYS LEU LEU ASP LEU LEU GLU GLN SER LYS ALA SEQRES 29 B 698 THR ARG ASP ARG ASP LEU THR LEU ALA LEU PHE ASN ASN SEQRES 30 B 698 THR ALA MSE LEU GLY SER ALA THR GLN LEU TYR ARG LEU SEQRES 31 B 698 SER ILE GLU ARG GLU LYS PRO ASN ALA GLU ARG GLU SER SEQRES 32 B 698 GLY TYR GLN GLU ARG ASP LEU PRO ALA ILE GLU GLY GLY SEQRES 33 B 698 LEU LYS GLN LEU GLU ARG ARG TYR VAL ALA ALA MSE ASP SEQRES 34 B 698 ARG GLN LEU GLN GLU TYR TRP LEU ASN GLU TYR ILE LYS SEQRES 35 B 698 LEU PRO ALA ASP GLN ARG VAL ALA ALA VAL ASP ALA TRP SEQRES 36 B 698 LEU GLY GLY ASN ASP ALA ALA ALA VAL LYS ARG ALA LEU SEQRES 37 B 698 ASP ARG LEU ALA GLY THR LYS LEU GLY SER THR GLU GLU SEQRES 38 B 698 ARG LEU LYS TRP PHE ALA ALA ASP ARG LYS ALA PHE GLU SEQRES 39 B 698 ALA SER ASN ASP PRO ALA ILE GLN TYR ALA VAL ALA VAL SEQRES 40 B 698 MSE PRO THR LEU LEU LYS LEU GLU GLN GLU ARG LYS THR SEQRES 41 B 698 ARG ALA GLY GLU ASN LEU ALA ALA ARG PRO VAL TYR LEU SEQRES 42 B 698 GLN ALA LEU ALA ASP TYR LYS LYS SER GLN GLY GLU PHE SEQRES 43 B 698 VAL TYR PRO ASP ALA ASN LEU SER LEU ARG ILE THR PHE SEQRES 44 B 698 GLY ASN VAL MSE GLY TYR ALA PRO LYS ASP GLY MSE GLU SEQRES 45 B 698 TYR THR PRO PHE THR THR LEU GLU GLY VAL VAL ALA LYS SEQRES 46 B 698 GLU THR GLY GLN ASP PRO PHE ASP SER PRO LYS ALA LEU SEQRES 47 B 698 LEU ASP ALA VAL ALA ALA LYS ARG TYR GLY GLY LEU GLU SEQRES 48 B 698 ASP LYS ARG ILE GLY SER VAL PRO VAL ASN TYR LEU SER SEQRES 49 B 698 ASP LEU ASP ILE THR GLY GLY ASN ALA GLY SER PRO VAL SEQRES 50 B 698 LEU ASP ALA HIS GLY LYS LEU VAL GLY LEU ALA PHE ASP SEQRES 51 B 698 GLY ASN TRP GLU SER VAL SER SER ASN TRP VAL PHE ASP SEQRES 52 B 698 PRO LYS MSE THR ARG MSE ILE ALA VAL ASP GLY ARG TYR SEQRES 53 B 698 LEU ARG TRP ILE MSE GLN GLU VAL TYR PRO ALA PRO GLN SEQRES 54 B 698 LEU LEU LYS GLU MSE ASN VAL GLY LYS MODRES 3WOI MSE A 28 MET SELENOMETHIONINE MODRES 3WOI MSE A 61 MET SELENOMETHIONINE MODRES 3WOI MSE A 217 MET SELENOMETHIONINE MODRES 3WOI MSE A 268 MET SELENOMETHIONINE MODRES 3WOI MSE A 306 MET SELENOMETHIONINE MODRES 3WOI MSE A 325 MET SELENOMETHIONINE MODRES 3WOI MSE A 404 MET SELENOMETHIONINE MODRES 3WOI MSE A 452 MET SELENOMETHIONINE MODRES 3WOI MSE A 532 MET SELENOMETHIONINE MODRES 3WOI MSE A 587 MET SELENOMETHIONINE MODRES 3WOI MSE A 595 MET SELENOMETHIONINE MODRES 3WOI MSE A 690 MET SELENOMETHIONINE MODRES 3WOI MSE A 693 MET SELENOMETHIONINE MODRES 3WOI MSE A 705 MET SELENOMETHIONINE MODRES 3WOI MSE A 718 MET SELENOMETHIONINE MODRES 3WOI MSE B 28 MET SELENOMETHIONINE MODRES 3WOI MSE B 61 MET SELENOMETHIONINE MODRES 3WOI MSE B 217 MET SELENOMETHIONINE MODRES 3WOI MSE B 268 MET SELENOMETHIONINE MODRES 3WOI MSE B 306 MET SELENOMETHIONINE MODRES 3WOI MSE B 325 MET SELENOMETHIONINE MODRES 3WOI MSE B 404 MET SELENOMETHIONINE MODRES 3WOI MSE B 452 MET SELENOMETHIONINE MODRES 3WOI MSE B 532 MET SELENOMETHIONINE MODRES 3WOI MSE B 587 MET SELENOMETHIONINE MODRES 3WOI MSE B 595 MET SELENOMETHIONINE MODRES 3WOI MSE B 690 MET SELENOMETHIONINE MODRES 3WOI MSE B 693 MET SELENOMETHIONINE MODRES 3WOI MSE B 705 MET SELENOMETHIONINE MODRES 3WOI MSE B 718 MET SELENOMETHIONINE HET MSE A 28 8 HET MSE A 61 8 HET MSE A 217 8 HET MSE A 268 8 HET MSE A 306 8 HET MSE A 325 5 HET MSE A 404 8 HET MSE A 452 8 HET MSE A 532 8 HET MSE A 587 8 HET MSE A 595 8 HET MSE A 690 8 HET MSE A 693 8 HET MSE A 705 8 HET MSE A 718 8 HET MSE B 28 8 HET MSE B 61 8 HET MSE B 217 8 HET MSE B 268 8 HET MSE B 306 8 HET MSE B 325 5 HET MSE B 404 8 HET MSE B 452 8 HET MSE B 532 8 HET MSE B 587 8 HET MSE B 595 8 HET MSE B 690 8 HET MSE B 693 8 HET MSE B 705 8 HET MSE B 718 8 HET GOL A 801 6 HET GOL A 802 6 HET ZN A 803 1 HET ZN A 804 1 HET ZN A 805 1 HET GOL B 801 6 HET GOL B 802 6 HET GOL B 803 6 HET GOL B 804 6 HET GOL B 805 6 HET ZN B 806 1 HET ZN B 807 1 HET ZN B 808 1 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETNAM ZN ZINC ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 30(C5 H11 N O2 SE) FORMUL 3 GOL 7(C3 H8 O3) FORMUL 5 ZN 6(ZN 2+) FORMUL 16 HOH *1008(H2 O) HELIX 1 1 VAL A 30 GLU A 36 5 7 HELIX 2 2 ILE A 37 GLY A 45 1 9 HELIX 3 3 SER A 49 SER A 54 1 6 HELIX 4 4 PRO A 60 GLY A 62 5 3 HELIX 5 5 ASN A 84 ASN A 95 1 12 HELIX 6 6 ASN A 101 GLY A 106 1 6 HELIX 7 7 THR A 111 GLU A 115 5 5 HELIX 8 8 VAL A 133 ALA A 143 1 11 HELIX 9 9 ASP A 147 GLU A 167 1 21 HELIX 10 10 PRO A 203 LYS A 208 1 6 HELIX 11 11 GLY A 210 ASN A 215 1 6 HELIX 12 12 LEU A 281 TRP A 291 1 11 HELIX 13 13 TRP A 291 LYS A 312 1 22 HELIX 14 14 ALA A 315 TYR A 321 1 7 HELIX 15 15 TYR A 321 ASP A 346 1 26 HELIX 16 16 ASP A 346 GLN A 365 1 20 HELIX 17 17 GLY A 366 LYS A 368 5 3 HELIX 18 18 GLY A 369 THR A 389 1 21 HELIX 19 19 THR A 389 ASN A 400 1 12 HELIX 20 20 THR A 402 ARG A 418 1 17 HELIX 21 21 GLU A 419 LYS A 420 5 2 HELIX 22 22 PRO A 421 ARG A 425 5 5 HELIX 23 23 GLN A 430 ARG A 432 5 3 HELIX 24 24 ASP A 433 GLU A 445 1 13 HELIX 25 25 ARG A 446 TYR A 448 5 3 HELIX 26 26 VAL A 449 LEU A 467 1 19 HELIX 27 27 PRO A 468 ARG A 472 5 5 HELIX 28 28 VAL A 473 GLY A 481 1 9 HELIX 29 29 ASP A 484 ALA A 496 1 13 HELIX 30 30 SER A 502 ALA A 512 1 11 HELIX 31 31 ASP A 513 ALA A 519 1 7 HELIX 32 32 ASP A 522 GLN A 567 1 46 HELIX 33 33 LEU A 603 LYS A 609 1 7 HELIX 34 34 PRO A 619 ALA A 628 1 10 HELIX 35 35 TRP A 677 VAL A 680 5 4 HELIX 36 36 GLY A 698 VAL A 708 1 11 HELIX 37 37 ALA A 711 MSE A 718 1 8 HELIX 38 38 VAL B 30 GLN B 32 5 3 HELIX 39 39 GLN B 33 GLY B 45 1 13 HELIX 40 40 SER B 49 ASP B 55 1 7 HELIX 41 41 PRO B 60 GLY B 62 5 3 HELIX 42 42 ASN B 84 ASN B 95 1 12 HELIX 43 43 ASN B 101 GLY B 106 1 6 HELIX 44 44 THR B 111 GLU B 115 5 5 HELIX 45 45 VAL B 133 ALA B 143 1 11 HELIX 46 46 ASP B 147 GLU B 167 1 21 HELIX 47 47 SER B 180 ASN B 183 5 4 HELIX 48 48 PRO B 203 LYS B 208 1 6 HELIX 49 49 GLY B 210 ASN B 215 1 6 HELIX 50 50 LEU B 281 TRP B 291 1 11 HELIX 51 51 TRP B 291 ASN B 314 1 24 HELIX 52 52 ASN B 314 TYR B 321 1 8 HELIX 53 53 TYR B 321 ILE B 345 1 25 HELIX 54 54 ASP B 346 GLY B 364 1 19 HELIX 55 55 GLN B 365 LYS B 368 5 4 HELIX 56 56 GLY B 369 THR B 389 1 21 HELIX 57 57 THR B 389 ASN B 400 1 12 HELIX 58 58 THR B 402 ARG B 418 1 17 HELIX 59 59 GLU B 419 LYS B 420 5 2 HELIX 60 60 PRO B 421 ARG B 425 5 5 HELIX 61 61 GLN B 430 ARG B 432 5 3 HELIX 62 62 ASP B 433 LEU B 444 1 12 HELIX 63 63 GLU B 445 ARG B 447 5 3 HELIX 64 64 VAL B 449 LYS B 466 1 18 HELIX 65 65 PRO B 468 ARG B 472 5 5 HELIX 66 66 VAL B 473 GLY B 481 1 9 HELIX 67 67 ASP B 484 GLY B 497 1 14 HELIX 68 68 SER B 502 ALA B 511 1 10 HELIX 69 69 ASP B 513 SER B 520 1 8 HELIX 70 70 ASP B 522 GLN B 567 1 46 HELIX 71 71 LEU B 603 LYS B 609 1 7 HELIX 72 72 PRO B 619 ALA B 628 1 10 HELIX 73 73 TRP B 677 TRP B 684 5 8 HELIX 74 74 GLY B 698 VAL B 708 1 11 HELIX 75 75 ALA B 711 MSE B 718 1 8 SHEET 1 A 6 VAL A 64 ALA A 66 0 SHEET 2 A 6 THR A 71 PHE A 74 -1 O ALA A 72 N VAL A 65 SHEET 3 A 6 LEU A 80 THR A 83 -1 O VAL A 82 N SER A 73 SHEET 4 A 6 ALA A 226 VAL A 232 -1 O TYR A 228 N VAL A 81 SHEET 5 A 6 ASP A 195 ALA A 201 -1 N TYR A 200 O PHE A 227 SHEET 6 A 6 VAL A 116 SER A 117 -1 N VAL A 116 O LEU A 198 SHEET 1 B 4 PHE A 107 ASN A 108 0 SHEET 2 B 4 ASP A 195 ALA A 201 -1 O ALA A 201 N PHE A 107 SHEET 3 B 4 ALA A 226 VAL A 232 -1 O PHE A 227 N TYR A 200 SHEET 4 B 4 VAL A 246 PRO A 247 -1 O VAL A 246 N VAL A 232 SHEET 1 C 3 VAL A 124 ASP A 132 0 SHEET 2 C 3 THR A 184 ILE A 193 -1 O LEU A 187 N THR A 131 SHEET 3 C 3 PHE A 172 PHE A 179 -1 N PHE A 179 O THR A 184 SHEET 1 D 7 ARG A 580 ASN A 585 0 SHEET 2 D 7 PHE A 266 GLY A 271 -1 N GLY A 271 O ARG A 580 SHEET 3 D 7 PRO A 660 LEU A 662 -1 O LEU A 662 N MSE A 268 SHEET 4 D 7 LEU A 668 GLY A 675 -1 O VAL A 669 N VAL A 661 SHEET 5 D 7 MSE A 693 ASP A 697 -1 O ILE A 694 N ASP A 674 SHEET 6 D 7 PRO A 643 SER A 648 -1 N TYR A 646 O ALA A 695 SHEET 7 D 7 PHE A 600 THR A 602 -1 N THR A 601 O VAL A 644 SHEET 1 E 6 VAL B 64 ALA B 66 0 SHEET 2 E 6 THR B 71 PHE B 74 -1 O ALA B 72 N VAL B 65 SHEET 3 E 6 LEU B 80 THR B 83 -1 O VAL B 82 N SER B 73 SHEET 4 E 6 ALA B 226 VAL B 232 -1 O TYR B 228 N VAL B 81 SHEET 5 E 6 ASP B 195 ALA B 201 -1 N TYR B 200 O PHE B 227 SHEET 6 E 6 VAL B 116 SER B 117 -1 N VAL B 116 O LEU B 198 SHEET 1 F 4 PHE B 107 ASN B 108 0 SHEET 2 F 4 ASP B 195 ALA B 201 -1 O ALA B 201 N PHE B 107 SHEET 3 F 4 ALA B 226 VAL B 232 -1 O PHE B 227 N TYR B 200 SHEET 4 F 4 VAL B 246 PRO B 247 -1 O VAL B 246 N VAL B 232 SHEET 1 G 3 VAL B 124 ASP B 132 0 SHEET 2 G 3 THR B 184 ILE B 193 -1 O ILE B 193 N VAL B 124 SHEET 3 G 3 PHE B 172 PHE B 179 -1 N ARG B 175 O PHE B 188 SHEET 1 H 7 ARG B 580 ASN B 585 0 SHEET 2 H 7 PHE B 266 GLY B 271 -1 N GLY B 271 O ARG B 580 SHEET 3 H 7 PRO B 660 LEU B 662 -1 O LEU B 662 N MSE B 268 SHEET 4 H 7 LEU B 668 GLY B 675 -1 O VAL B 669 N VAL B 661 SHEET 5 H 7 MSE B 693 ASP B 697 -1 O ILE B 694 N ASP B 674 SHEET 6 H 7 PRO B 643 SER B 648 -1 N VAL B 644 O ASP B 697 SHEET 7 H 7 PHE B 600 THR B 602 -1 N THR B 601 O ASN B 645 SSBOND 1 CYS A 70 CYS A 87 1555 1555 2.15 SSBOND 2 CYS A 166 CYS A 174 1555 1555 2.09 SSBOND 3 CYS B 70 CYS B 87 1555 1555 2.20 SSBOND 4 CYS B 166 CYS B 174 1555 1555 2.12 LINK C GLY A 27 N MSE A 28 1555 1555 1.35 LINK C MSE A 28 N TRP A 29 1555 1555 1.32 LINK C PRO A 60 N MSE A 61 1555 1555 1.34 LINK C MSE A 61 N GLY A 62 1555 1555 1.34 LINK C TRP A 216 N MSE A 217 1555 1555 1.32 LINK C MSE A 217 N TRP A 218 1555 1555 1.33 LINK C VAL A 267 N MSE A 268 1555 1555 1.32 LINK C MSE A 268 N VAL A 269 1555 1555 1.33 LINK C ALA A 305 N MSE A 306 1555 1555 1.34 LINK C MSE A 306 N VAL A 307 1555 1555 1.33 LINK C ALA A 403 N MSE A 404 1555 1555 1.34 LINK C MSE A 404 N LEU A 405 1555 1555 1.34 LINK C ALA A 451 N MSE A 452 1555 1555 1.34 LINK C MSE A 452 N ASP A 453 1555 1555 1.31 LINK C VAL A 531 N MSE A 532 1555 1555 1.34 LINK C MSE A 532 N PRO A 533 1555 1555 1.33 LINK C VAL A 586 N MSE A 587 1555 1555 1.33 LINK C MSE A 587 N GLY A 588 1555 1555 1.32 LINK C GLY A 594 N MSE A 595 1555 1555 1.34 LINK C MSE A 595 N GLU A 596 1555 1555 1.32 LINK C LYS A 689 N MSE A 690 1555 1555 1.33 LINK C MSE A 690 N THR A 691 1555 1555 1.34 LINK C ARG A 692 N MSE A 693 1555 1555 1.32 LINK C MSE A 693 N ILE A 694 1555 1555 1.32 LINK C ILE A 704 N MSE A 705 1555 1555 1.32 LINK C MSE A 705 N GLN A 706 1555 1555 1.34 LINK C GLU A 717 N MSE A 718 1555 1555 1.31 LINK C MSE A 718 N ASN A 719 1555 1555 1.34 LINK C GLY B 27 N MSE B 28 1555 1555 1.32 LINK C MSE B 28 N TRP B 29 1555 1555 1.31 LINK C PRO B 60 N MSE B 61 1555 1555 1.34 LINK C MSE B 61 N GLY B 62 1555 1555 1.33 LINK C TRP B 216 N MSE B 217 1555 1555 1.34 LINK C MSE B 217 N TRP B 218 1555 1555 1.32 LINK C VAL B 267 N MSE B 268 1555 1555 1.32 LINK C MSE B 268 N VAL B 269 1555 1555 1.33 LINK C ALA B 305 N MSE B 306 1555 1555 1.33 LINK C MSE B 306 N VAL B 307 1555 1555 1.34 LINK C ALA B 403 N MSE B 404 1555 1555 1.34 LINK C MSE B 404 N LEU B 405 1555 1555 1.33 LINK C ALA B 451 N MSE B 452 1555 1555 1.33 LINK C MSE B 452 N ASP B 453 1555 1555 1.33 LINK C VAL B 531 N MSE B 532 1555 1555 1.31 LINK C MSE B 532 N PRO B 533 1555 1555 1.37 LINK C VAL B 586 N MSE B 587 1555 1555 1.32 LINK C MSE B 587 N GLY B 588 1555 1555 1.31 LINK C GLY B 594 N MSE B 595 1555 1555 1.32 LINK C MSE B 595 N GLU B 596 1555 1555 1.34 LINK C LYS B 689 N MSE B 690 1555 1555 1.32 LINK C MSE B 690 N THR B 691 1555 1555 1.31 LINK C ARG B 692 N MSE B 693 1555 1555 1.33 LINK C MSE B 693 N ILE B 694 1555 1555 1.32 LINK C ILE B 704 N MSE B 705 1555 1555 1.33 LINK C MSE B 705 N GLN B 706 1555 1555 1.34 LINK C GLU B 717 N MSE B 718 1555 1555 1.33 LINK C MSE B 718 N ASN B 719 1555 1555 1.34 LINK OD2 ASP B 147 ZN ZN B 807 1555 1555 1.92 LINK OD2 ASP A 59 ZN ZN A 804 1555 1555 2.00 LINK ND1 HIS B 252 ZN ZN B 806 1555 1555 2.01 LINK OD2 ASP B 59 ZN ZN B 806 1555 1555 2.02 LINK OE1 GLU A 635 ZN ZN A 805 1555 1555 2.26 LINK OD1 ASP B 59 ZN ZN B 806 1555 1555 2.48 LINK OD1 ASP B 674 ZN ZN B 808 1555 1555 2.55 LINK OE2 GLU A 635 ZN ZN A 805 1555 1555 2.58 LINK OD1 ASN B 215 ZN ZN B 808 1555 1555 2.68 LINK C THR A 324 N MSE A 325 1555 1555 1.34 LINK C MSE A 325 N ALA A 326 1555 1555 1.33 LINK C THR B 324 N MSE B 325 1555 1555 1.37 LINK C MSE B 325 N ALA B 326 1555 1555 1.33 LINK ZN ZN A 803 O HOH A1187 1555 1555 1.74 LINK ZN ZN A 805 O HOH A1214 1555 1555 1.89 LINK ZN ZN B 806 O HOH B1479 1555 1555 2.12 LINK ZN ZN B 807 O HOH B1480 1555 1555 2.19 LINK ZN ZN A 803 O HOH A1186 1555 1555 2.23 LINK ZN ZN A 804 O HOH A1212 1555 1555 2.24 LINK ZN ZN B 807 O HOH B1587 1555 1555 2.44 CISPEP 1 ASP A 59 PRO A 60 0 3.85 CISPEP 2 TRP A 218 PRO A 219 0 5.29 CISPEP 3 ASP A 614 PRO A 615 0 -3.41 CISPEP 4 ASP B 59 PRO B 60 0 1.28 CISPEP 5 TRP B 218 PRO B 219 0 3.69 CISPEP 6 ASP B 614 PRO B 615 0 11.82 SITE 1 AC1 9 ALA A 257 ASP A 258 PRO A 260 ARG A 699 SITE 2 AC1 9 ARG A 702 HOH A1017 HOH A1033 HOH A1057 SITE 3 AC1 9 HOH A1169 SITE 1 AC2 5 ASP A 593 GLY A 594 THR A 598 PHE A 600 SITE 2 AC2 5 HOH A1004 SITE 1 AC3 4 HIS A 665 HOH A1186 HOH A1187 GLU B 635 SITE 1 AC4 3 ASP A 59 HIS A 252 HOH A1212 SITE 1 AC5 4 GLU A 635 HOH A1214 HIS B 665 HOH B1575 SITE 1 AC6 4 ARG B 413 GLU B 539 ARG B 542 HOH B 963 SITE 1 AC7 6 ASP B 212 ASN B 329 LYS B 333 HOH B1147 SITE 2 AC7 6 HOH B1316 HOH B1481 SITE 1 AC8 7 TYR B 89 LYS B 208 ASP B 212 ALA B 322 SITE 2 AC8 7 ALA B 326 ASN B 329 HOH B 960 SITE 1 AC9 8 ASP B 593 GLY B 594 THR B 598 PHE B 600 SITE 2 AC9 8 ILE B 639 HOH B1076 HOH B1184 HOH B1510 SITE 1 BC1 9 ILE B 652 THR B 653 GLY B 654 PHE B 673 SITE 2 BC1 9 ASP B 674 GLY B 675 HOH B1393 HOH B1482 SITE 3 BC1 9 HOH B1483 SITE 1 BC2 4 ASN A 483 ASP B 59 HIS B 252 HOH B1479 SITE 1 BC3 4 ASP B 114 ASP B 147 HOH B1480 HOH B1587 SITE 1 BC4 5 ASN B 215 TRP B 216 ASN B 330 ASP B 674 SITE 2 BC4 5 HOH B1251 CRYST1 119.900 119.900 226.780 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008340 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008340 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004410 0.00000