HEADER TRANSFERASE 05-JAN-14 3WOV TITLE CRYSTAL STRUCTURE OF THE C-TERMINAL GLOBULAR DOMAIN OF TITLE 2 OLIGOSACCHARYLTRANSFERASE (PAAGLB-L, Q9V250_PYRAB, PAB2202) FROM TITLE 3 PYROCOCCUS ABYSSI COMPND MOL_ID: 1; COMPND 2 MOLECULE: OLIGOSACCHARYL TRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 476-976; COMPND 5 SYNONYM: PAAGLB-L, OLIGOSACCHARYL TRANSFERASE, STT3 SUBUNIT; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS ABYSSI; SOURCE 3 ORGANISM_TAXID: 272844; SOURCE 4 STRAIN: GE5 / ORSAY; SOURCE 5 GENE: PAB2202, PYRAB02240; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS OLIGOSACCHARIDE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.MATSUOKA,J.NYIRENDA,N.MAITA,D.KOHDA REVDAT 2 06-MAR-24 3WOV 1 KEYWDS REMARK SEQADV LINK REVDAT 1 22-JAN-14 3WOV 0 JRNL AUTH R.MATSUOKA,J.NYIRENDA,N.MAITA,D.KOHDA JRNL TITL CRYSTAL STRUCTURE OF THE C-TERMINAL GLOBULAR DOMAIN OF JRNL TITL 2 OLIGOSACCHARYLTRANSFERASE (PAAGLB-L, Q9V250_PYRAB, PAB2202) JRNL TITL 3 FROM PYROCOCCUS ABYSSI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.11 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.11 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.930 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 11220 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1124 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.6168 - 6.1873 0.97 1329 144 0.2192 0.2683 REMARK 3 2 6.1873 - 4.9256 1.00 1290 148 0.2339 0.2439 REMARK 3 3 4.9256 - 4.3073 1.00 1272 141 0.1962 0.2459 REMARK 3 4 4.3073 - 3.9154 1.00 1240 139 0.2117 0.2517 REMARK 3 5 3.9154 - 3.6359 1.00 1261 139 0.2476 0.2542 REMARK 3 6 3.6359 - 3.4222 1.00 1238 141 0.2630 0.3104 REMARK 3 7 3.4222 - 3.2512 1.00 1242 137 0.2865 0.3414 REMARK 3 8 3.2512 - 3.1100 1.00 1224 135 0.2873 0.3452 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 102.7 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 116.2 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3737 REMARK 3 ANGLE : 0.810 5068 REMARK 3 CHIRALITY : 0.031 556 REMARK 3 PLANARITY : 0.003 640 REMARK 3 DIHEDRAL : 13.723 1366 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 492:550) REMARK 3 ORIGIN FOR THE GROUP (A): -35.3048 17.7946 -2.4735 REMARK 3 T TENSOR REMARK 3 T11: 1.4565 T22: 1.1818 REMARK 3 T33: 0.8105 T12: -0.1116 REMARK 3 T13: 0.0951 T23: 0.0785 REMARK 3 L TENSOR REMARK 3 L11: 5.3849 L22: 1.5618 REMARK 3 L33: 4.5299 L12: 2.6258 REMARK 3 L13: -0.7481 L23: -1.0407 REMARK 3 S TENSOR REMARK 3 S11: 0.1618 S12: -1.8439 S13: -0.0108 REMARK 3 S21: 0.9985 S22: -0.4306 S23: 0.2193 REMARK 3 S31: 0.0760 S32: 0.1375 S33: 0.0950 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 551:617) REMARK 3 ORIGIN FOR THE GROUP (A): -22.2210 17.5187 -12.7406 REMARK 3 T TENSOR REMARK 3 T11: 1.0629 T22: 0.6326 REMARK 3 T33: 0.7470 T12: 0.1047 REMARK 3 T13: -0.0146 T23: 0.1290 REMARK 3 L TENSOR REMARK 3 L11: 8.4016 L22: 1.2968 REMARK 3 L33: 3.8666 L12: 3.7667 REMARK 3 L13: 0.8963 L23: 0.4425 REMARK 3 S TENSOR REMARK 3 S11: -0.2938 S12: -0.6421 S13: -0.8241 REMARK 3 S21: 0.3516 S22: 0.1494 S23: -0.2332 REMARK 3 S31: 0.7033 S32: 0.2851 S33: 0.1683 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 618:690) REMARK 3 ORIGIN FOR THE GROUP (A): -9.0574 30.0185 -18.7527 REMARK 3 T TENSOR REMARK 3 T11: 0.9547 T22: 0.8630 REMARK 3 T33: 0.9067 T12: -0.0991 REMARK 3 T13: -0.0797 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 8.4321 L22: 4.5050 REMARK 3 L33: 8.0019 L12: 3.2302 REMARK 3 L13: -0.2983 L23: 1.0419 REMARK 3 S TENSOR REMARK 3 S11: 0.1653 S12: -0.5492 S13: 0.0646 REMARK 3 S21: 0.3951 S22: -0.0530 S23: -0.5720 REMARK 3 S31: -0.5538 S32: 1.1682 S33: 0.0397 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 691:804) REMARK 3 ORIGIN FOR THE GROUP (A): -42.5388 28.5176 -23.4068 REMARK 3 T TENSOR REMARK 3 T11: 1.0037 T22: 0.7411 REMARK 3 T33: 0.7421 T12: -0.0453 REMARK 3 T13: -0.0030 T23: -0.0298 REMARK 3 L TENSOR REMARK 3 L11: 5.0803 L22: 1.5846 REMARK 3 L33: 5.1133 L12: -1.4184 REMARK 3 L13: 1.8649 L23: -0.3449 REMARK 3 S TENSOR REMARK 3 S11: -0.0919 S12: 0.2985 S13: 0.1764 REMARK 3 S21: 0.0043 S22: -0.0955 S23: 0.0388 REMARK 3 S31: -0.0897 S32: -0.7693 S33: 0.1739 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 805:850) REMARK 3 ORIGIN FOR THE GROUP (A): -50.8737 16.4547 -14.7518 REMARK 3 T TENSOR REMARK 3 T11: 0.6819 T22: 0.7474 REMARK 3 T33: 0.7492 T12: -0.1309 REMARK 3 T13: -0.0201 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 4.1351 L22: 0.9105 REMARK 3 L33: 5.5396 L12: -0.2202 REMARK 3 L13: -2.0102 L23: -0.7701 REMARK 3 S TENSOR REMARK 3 S11: -0.5064 S12: -0.2574 S13: -0.7302 REMARK 3 S21: 0.2266 S22: 0.0182 S23: -0.0668 REMARK 3 S31: 0.4929 S32: -0.5651 S33: 0.2080 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 851:970) REMARK 3 ORIGIN FOR THE GROUP (A): -44.9720 4.9420 -15.4340 REMARK 3 T TENSOR REMARK 3 T11: 1.3185 T22: 0.6223 REMARK 3 T33: 1.2002 T12: -0.2901 REMARK 3 T13: 0.2934 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 4.4477 L22: 1.5165 REMARK 3 L33: 3.9847 L12: -0.7062 REMARK 3 L13: -1.6225 L23: 0.6515 REMARK 3 S TENSOR REMARK 3 S11: -0.6438 S12: -0.0291 S13: -1.6723 REMARK 3 S21: -0.2253 S22: 0.0091 S23: 0.4552 REMARK 3 S31: 0.9794 S32: -0.6613 S33: 0.2813 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3WOV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000096606. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11310 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.110 REMARK 200 RESOLUTION RANGE LOW (A) : 204.750 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.30 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.20 REMARK 200 R MERGE FOR SHELL (I) : 0.94800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% JEFFAMINE ED 2001, PH 7.0, 0.1M REMARK 280 HEPES, 3% 6-AMINOHEXANOIC ACID, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.25000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 136.50000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 136.50000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 68.25000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 475 REMARK 465 VAL A 476 REMARK 465 ILE A 477 REMARK 465 ALA A 478 REMARK 465 ARG A 479 REMARK 465 ASN A 480 REMARK 465 ALA A 481 REMARK 465 LYS A 482 REMARK 465 ALA A 483 REMARK 465 LEU A 484 REMARK 465 LYS A 485 REMARK 465 VAL A 486 REMARK 465 SER A 487 REMARK 465 GLU A 488 REMARK 465 ILE A 489 REMARK 465 GLU A 490 REMARK 465 THR A 491 REMARK 465 LEU A 525 REMARK 465 LEU A 526 REMARK 465 GLY A 527 REMARK 465 HIS A 528 REMARK 465 ARG A 529 REMARK 465 ARG A 530 REMARK 465 ALA A 531 REMARK 465 SER A 532 REMARK 465 ALA A 533 REMARK 465 ASP A 534 REMARK 465 GLY A 535 REMARK 465 GLY A 536 REMARK 465 LYS A 835 REMARK 465 LEU A 836 REMARK 465 ASN A 837 REMARK 465 GLY A 883 REMARK 465 LYS A 884 REMARK 465 SER A 885 REMARK 465 ASN A 886 REMARK 465 ASP A 887 REMARK 465 ASP A 888 REMARK 465 TYR A 889 REMARK 465 PRO A 971 REMARK 465 HIS A 972 REMARK 465 HIS A 973 REMARK 465 GLY A 974 REMARK 465 SER A 975 REMARK 465 GLU A 976 REMARK 465 HIS A 977 REMARK 465 HIS A 978 REMARK 465 HIS A 979 REMARK 465 HIS A 980 REMARK 465 HIS A 981 REMARK 465 HIS A 982 REMARK 465 HIS A 983 REMARK 465 HIS A 984 REMARK 465 HIS A 985 REMARK 465 HIS A 986 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 501 -4.37 65.40 REMARK 500 TYR A 508 47.09 -106.79 REMARK 500 ASN A 594 -34.04 -133.42 REMARK 500 GLU A 597 -162.11 57.39 REMARK 500 ARG A 600 143.17 63.32 REMARK 500 GLN A 629 34.46 36.95 REMARK 500 THR A 632 76.62 -104.43 REMARK 500 THR A 633 98.07 -162.81 REMARK 500 ALA A 644 -72.93 -151.06 REMARK 500 LEU A 684 113.81 -160.67 REMARK 500 TYR A 724 -79.74 -99.54 REMARK 500 ILE A 840 -118.60 38.36 REMARK 500 ALA A 841 153.27 67.17 REMARK 500 ARG A 845 74.78 -157.59 REMARK 500 THR A 854 -152.74 -112.69 REMARK 500 LEU A 855 72.87 -176.25 REMARK 500 ALA A 920 107.21 59.88 REMARK 500 GLU A 921 110.18 -160.50 REMARK 500 VAL A 928 -73.32 -54.93 REMARK 500 TYR A 940 -161.84 -107.84 REMARK 500 ASP A 942 -61.82 69.05 REMARK 500 GLU A 958 99.94 -60.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1001 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 557 OE1 REMARK 620 2 GLU A 557 OE2 53.3 REMARK 620 3 ALA A 767 O 81.2 133.5 REMARK 620 4 HIS A 799 O 87.4 102.8 82.0 REMARK 620 5 GLU A 802 OE2 158.0 147.2 77.0 92.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1001 DBREF 3WOV A 476 976 UNP Q9V250 Q9V250_PYRAB 476 976 SEQADV 3WOV MET A 475 UNP Q9V250 EXPRESSION TAG SEQADV 3WOV HIS A 977 UNP Q9V250 EXPRESSION TAG SEQADV 3WOV HIS A 978 UNP Q9V250 EXPRESSION TAG SEQADV 3WOV HIS A 979 UNP Q9V250 EXPRESSION TAG SEQADV 3WOV HIS A 980 UNP Q9V250 EXPRESSION TAG SEQADV 3WOV HIS A 981 UNP Q9V250 EXPRESSION TAG SEQADV 3WOV HIS A 982 UNP Q9V250 EXPRESSION TAG SEQADV 3WOV HIS A 983 UNP Q9V250 EXPRESSION TAG SEQADV 3WOV HIS A 984 UNP Q9V250 EXPRESSION TAG SEQADV 3WOV HIS A 985 UNP Q9V250 EXPRESSION TAG SEQADV 3WOV HIS A 986 UNP Q9V250 EXPRESSION TAG SEQRES 1 A 512 MET VAL ILE ALA ARG ASN ALA LYS ALA LEU LYS VAL SER SEQRES 2 A 512 GLU ILE GLU THR THR GLY TRP GLU GLN VAL LEU LYS TRP SEQRES 3 A 512 LEU ASN GLU ASN THR SER LYS TYR ALA THR ALA THR SER SEQRES 4 A 512 TRP TRP ASP TYR GLY TYR TRP ILE GLU SER SER LEU LEU SEQRES 5 A 512 GLY HIS ARG ARG ALA SER ALA ASP GLY GLY HIS ALA ARG SEQRES 6 A 512 ASP ARG ASP HIS ILE LEU ALA LEU PHE LEU ALA ARG ASP SEQRES 7 A 512 GLY ASN VAL SER GLU VAL ASP PHE GLU SER TRP GLU LEU SEQRES 8 A 512 ASN TYR PHE ILE ILE TYR LEU ASN ASP TRP ALA LYS PHE SEQRES 9 A 512 ASN ALA ILE SER TYR LEU GLY GLY ALA ILE THR ARG ARG SEQRES 10 A 512 GLU TYR ASN GLY ASP GLU THR GLY ARG GLY GLN VAL THR SEQRES 11 A 512 THR ILE LEU PRO LEU GLN GLY SER GLY GLY ILE TYR VAL SEQRES 12 A 512 ASN PRO TYR ALA GLY ILE SER VAL ARG VAL VAL GLN SER SEQRES 13 A 512 ASN THR THR SER LYS VAL THR VAL ASN VAL ARG GLY ARG SEQRES 14 A 512 ALA GLU CYS SER PRO ILE TYR THR LEU LEU ILE PRO GLY SEQRES 15 A 512 ASN LYS LYS ILE PRO GLY ASN GLY ARG CYS SER ASP GLY SEQRES 16 A 512 SER PRO PHE PRO TYR VAL LEU TYR LEU ALA PRO ASN PHE SEQRES 17 A 512 GLY LEU ILE THR TYR TYR LYS VAL ALA THR SER ASN PHE SEQRES 18 A 512 ILE LYS LEU ALA PHE ASN ILE PRO ILE SER LYS TYR SER SEQRES 19 A 512 GLY PHE THR GLU LYS LEU TYR SER ASN PHE VAL PRO VAL SEQRES 20 A 512 TYR GLY TYR GLY ASN VAL ILE VAL TYR GLU PHE ARG PRO SEQRES 21 A 512 PHE ALA ILE TYR ARG ILE GLU GLU LEU ILE ASN GLY THR SEQRES 22 A 512 TRP LYS ALA VAL ASN SER LEU THR PRO GLY LYS HIS GLU SEQRES 23 A 512 LEU LYS LEU TYR ILE SER ALA PHE GLY ARG ASP ILE ARG SEQRES 24 A 512 ASN ALA THR LEU TYR VAL TYR ALA ILE GLY ASN LYS THR SEQRES 25 A 512 GLU LYS ILE LYS ILE GLY GLU ILE GLU TYR MET ASN HIS SEQRES 26 A 512 LEU ASN GLU LYS PRO ILE ILE VAL ASN VAL THR LEU PRO SEQRES 27 A 512 LYS ALA GLU LYS TYR ARG LEU VAL LEU VAL GLN LYS GLY SEQRES 28 A 512 PRO VAL GLY VAL LEU THR GLY PRO PRO LYS LEU ASN GLY SEQRES 29 A 512 GLU ILE ALA ASN PRO ILE ARG ILE ALA ARG GLU GLY GLU SEQRES 30 A 512 LYS GLY THR LEU SER LEU LYS VAL GLY VAL ASP LYS ASP SEQRES 31 A 512 TYR THR ALA ASP LEU TYR LEU ARG ALA THR PHE ILE TYR SEQRES 32 A 512 LEU VAL ARG LYS GLU GLY LYS SER ASN ASP ASP TYR ASN SEQRES 33 A 512 ALA ALA PHE GLU PRO HIS MET ASP THR PHE PHE ILE THR SEQRES 34 A 512 LYS LEU LYS GLY GLY ILE LYS LEU HIS LYS GLY ASP ASN SEQRES 35 A 512 VAL VAL THR ALA GLU LEU ASN MET PRO ASN GLY VAL ILE SEQRES 36 A 512 SER SER TYR LYS GLU LYS LEU GLU LYS GLU TYR GLY ASP SEQRES 37 A 512 LYS LEU ILE ILE ARG GLY ILE ARG VAL GLU PRO VAL PHE SEQRES 38 A 512 ILE ALA GLU LYS GLU TYR VAL MET ALA GLU VAL ARG ALA SEQRES 39 A 512 SER ALA PRO HIS HIS GLY SER GLU HIS HIS HIS HIS HIS SEQRES 40 A 512 HIS HIS HIS HIS HIS HET CA A1001 1 HETNAM CA CALCIUM ION FORMUL 2 CA CA 2+ HELIX 1 1 GLY A 493 TRP A 500 1 8 HELIX 2 2 GLY A 518 SER A 523 1 6 HELIX 3 3 ASP A 540 ARG A 551 1 12 HELIX 4 4 ASP A 552 GLU A 557 5 6 HELIX 5 5 PHE A 560 GLU A 564 5 5 HELIX 6 6 ASN A 573 ALA A 576 5 4 HELIX 7 7 LYS A 577 GLY A 586 1 10 HELIX 8 8 THR A 589 ASN A 594 1 6 HELIX 9 9 LYS A 689 ALA A 691 5 3 HELIX 10 10 SER A 693 PHE A 700 1 8 HELIX 11 11 GLY A 709 ASN A 717 1 9 HELIX 12 12 GLY A 927 LYS A 938 1 12 SHEET 1 A 4 ALA A 511 THR A 512 0 SHEET 2 A 4 TYR A 567 TYR A 571 1 O ILE A 569 N THR A 512 SHEET 3 A 4 VAL A 727 PHE A 732 -1 O ILE A 728 N ILE A 570 SHEET 4 A 4 PHE A 718 GLY A 723 -1 N VAL A 719 O GLU A 731 SHEET 1 B 5 ILE A 606 GLN A 610 0 SHEET 2 B 5 PHE A 682 TYR A 687 -1 O ILE A 685 N LEU A 607 SHEET 3 B 5 TYR A 674 LEU A 678 -1 N VAL A 675 O THR A 686 SHEET 4 B 5 TYR A 650 LEU A 653 1 N LEU A 652 O LEU A 678 SHEET 5 B 5 LYS A 659 PRO A 661 -1 O ILE A 660 N THR A 651 SHEET 1 C 4 ILE A 615 VAL A 617 0 SHEET 2 C 4 SER A 624 VAL A 627 -1 O VAL A 625 N TYR A 616 SHEET 3 C 4 VAL A 636 ASN A 639 -1 O THR A 637 N ARG A 626 SHEET 4 C 4 GLU A 645 CYS A 646 -1 O CYS A 646 N VAL A 638 SHEET 1 D 4 THR A 747 ALA A 750 0 SHEET 2 D 4 PHE A 735 ILE A 744 -1 N GLU A 742 O LYS A 749 SHEET 3 D 4 GLY A 757 ALA A 767 -1 O LYS A 762 N GLU A 741 SHEET 4 D 4 ILE A 805 LEU A 811 -1 O ILE A 805 N LEU A 763 SHEET 1 E 6 THR A 786 MET A 797 0 SHEET 2 E 6 ILE A 772 ILE A 782 -1 N ALA A 775 O ILE A 794 SHEET 3 E 6 LYS A 816 VAL A 827 -1 O VAL A 820 N TYR A 778 SHEET 4 E 6 LEU A 944 ARG A 967 -1 O PHE A 955 N VAL A 827 SHEET 5 E 6 TYR A 865 ARG A 880 -1 N ARG A 872 O GLU A 952 SHEET 6 E 6 PHE A 893 LYS A 904 -1 O THR A 903 N LEU A 871 SHEET 1 F 6 THR A 786 MET A 797 0 SHEET 2 F 6 ILE A 772 ILE A 782 -1 N ALA A 775 O ILE A 794 SHEET 3 F 6 LYS A 816 VAL A 827 -1 O VAL A 820 N TYR A 778 SHEET 4 F 6 LEU A 944 ARG A 967 -1 O PHE A 955 N VAL A 827 SHEET 5 F 6 TYR A 865 ARG A 880 -1 N ARG A 872 O GLU A 952 SHEET 6 F 6 ILE A 909 LEU A 911 -1 O LEU A 911 N TYR A 865 SHEET 1 G 3 VAL A 829 LEU A 830 0 SHEET 2 G 3 LEU A 857 VAL A 861 -1 O GLY A 860 N VAL A 829 SHEET 3 G 3 GLY A 914 VAL A 918 -1 O GLY A 914 N VAL A 861 LINK OE1 GLU A 557 CA CA A1001 1555 1555 2.46 LINK OE2 GLU A 557 CA CA A1001 1555 1555 2.47 LINK O ALA A 767 CA CA A1001 1555 1555 2.70 LINK O HIS A 799 CA CA A1001 1555 1555 2.46 LINK OE2 GLU A 802 CA CA A1001 1555 1555 2.59 CISPEP 1 GLY A 613 GLY A 614 0 2.80 CISPEP 2 ASN A 631 THR A 632 0 4.50 CISPEP 3 ARG A 643 ALA A 644 0 -4.41 CISPEP 4 ILE A 654 PRO A 655 0 2.14 CISPEP 5 PRO A 833 PRO A 834 0 -2.32 CISPEP 6 GLY A 907 GLY A 908 0 -0.35 CISPEP 7 GLY A 941 ASP A 942 0 5.81 SITE 1 AC1 4 GLU A 557 ALA A 767 HIS A 799 GLU A 802 CRYST1 70.748 70.748 204.750 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014135 0.008161 0.000000 0.00000 SCALE2 0.000000 0.016321 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004884 0.00000