HEADER TRANSFERASE 20-FEB-14 3WR7 TITLE CRYSTAL STRUCTURE OF SPERMIDINE ACETYLTRANSFERASE FROM ESCHERICHIA TITLE 2 COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPERMIDINE N1-ACETYLTRANSFERASE; COMPND 3 CHAIN: A, C, B, D; COMPND 4 FRAGMENT: UNP RESIDUES 5-174; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 1335916; SOURCE 4 STRAIN: LY180; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS ALPHA AND BETA, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.SUGIYAMA,S.ISHIKAWA,S.TOMITORI,M.NIIYAMA,M.HIROSE,Y.MIYAZAKI, AUTHOR 2 K.HIGASHI,H.ADACHI,K.TAKANO,S.MURAKAMI,T.INOUE,Y.MORI,K.KASHIWAGI, AUTHOR 3 K.IGARASHI,H.MATSUMURA REVDAT 3 20-MAR-24 3WR7 1 REMARK REVDAT 2 08-JUN-16 3WR7 1 JRNL REVDAT 1 02-SEP-15 3WR7 0 JRNL AUTH S.SUGIYAMA,S.ISHIKAWA,H.TOMITORI,M.NIIYAMA,M.HIROSE, JRNL AUTH 2 Y.MIYAZAKI,K.HIGASHI,M.MURATA,H.ADACHI,K.TAKANO,S.MURAKAMI, JRNL AUTH 3 T.INOUE,Y.MORI,K.KASHIWAGI,K.IGARASHI,H.MATSUMURA JRNL TITL MOLECULAR MECHANISM UNDERLYING PROMISCUOUS POLYAMINE JRNL TITL 2 RECOGNITION BY SPERMIDINE ACETYLTRANSFERASE JRNL REF INT.J.BIOCHEM.CELL BIOL. V. 76 87 2016 JRNL REFN ISSN 1357-2725 JRNL PMID 27163532 JRNL DOI 10.1016/J.BIOCEL.2016.05.003 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.02 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 36114 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1917 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2681 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.2880 REMARK 3 BIN FREE R VALUE SET COUNT : 141 REMARK 3 BIN FREE R VALUE : 0.4130 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5724 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 232 REMARK 3 SOLVENT ATOMS : 170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.394 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.290 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.226 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.175 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6108 ; 0.019 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8237 ; 2.049 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 678 ; 6.808 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 337 ;35.847 ;23.412 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1059 ;20.967 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 49 ;22.437 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 841 ; 0.176 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4629 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3382 ; 0.998 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5435 ; 1.912 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2726 ; 2.651 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2802 ; 4.137 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3WR7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000096690. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : ROTATED-INCLINED DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR , SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38070 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM SODIUM CACODYLATE PH 6.5, 9%(W/V) REMARK 280 PEG 8000, 0.1M CALCIUM ACETATE., VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 52490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 81020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 35 49.93 -79.16 REMARK 500 ILE A 75 105.06 -43.43 REMARK 500 LYS A 128 -73.22 -53.12 REMARK 500 ASN A 151 41.90 38.11 REMARK 500 HIS A 171 58.57 -92.79 REMARK 500 ILE C 75 106.81 -43.77 REMARK 500 ASN C 126 77.23 -102.87 REMARK 500 LYS C 128 -71.16 -42.43 REMARK 500 ASN C 151 54.01 33.96 REMARK 500 ILE B 75 109.80 -56.80 REMARK 500 ASN B 151 57.60 23.63 REMARK 500 GLU D 37 115.55 -160.23 REMARK 500 ASP D 63 37.80 35.45 REMARK 500 LYS D 66 100.26 88.61 REMARK 500 GLU D 91 -9.00 -52.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SPD A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SPD C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SPD B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SPD D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA D 202 DBREF 3WR7 A 3 172 UNP T2FY33 T2FY33_ECOLX 5 174 DBREF 3WR7 C 3 172 UNP T2FY33 T2FY33_ECOLX 5 174 DBREF 3WR7 B 3 172 UNP T2FY33 T2FY33_ECOLX 5 174 DBREF 3WR7 D 3 172 UNP T2FY33 T2FY33_ECOLX 5 174 SEQRES 1 A 170 HIS SER VAL LYS LEU ARG PRO LEU GLU ARG GLU ASP LEU SEQRES 2 A 170 ARG TYR VAL HIS GLN LEU ASP ASN ASN ALA SER VAL MET SEQRES 3 A 170 ARG TYR TRP PHE GLU GLU PRO TYR GLU ALA PHE VAL GLU SEQRES 4 A 170 LEU SER ASP LEU TYR ASP LYS HIS ILE HIS ASP GLN SER SEQRES 5 A 170 GLU ARG ARG PHE VAL VAL GLU CYS ASP GLY GLU LYS ALA SEQRES 6 A 170 GLY LEU VAL GLU LEU VAL GLU ILE ASN HIS VAL HIS ARG SEQRES 7 A 170 ARG ALA GLU PHE GLN ILE ILE ILE SER PRO GLU TYR GLN SEQRES 8 A 170 GLY LYS GLY LEU ALA THR ARG ALA ALA LYS LEU ALA MET SEQRES 9 A 170 ASP TYR GLY PHE THR VAL LEU ASN LEU TYR LYS LEU TYR SEQRES 10 A 170 LEU ILE VAL ASP LYS GLU ASN GLU LYS ALA ILE HIS ILE SEQRES 11 A 170 TYR ARG LYS LEU GLY PHE SER VAL GLU GLY GLU LEU MET SEQRES 12 A 170 HIS GLU PHE PHE ILE ASN GLY GLN TYR ARG ASN ALA ILE SEQRES 13 A 170 ARG MET CYS ILE PHE GLN HIS GLN TYR LEU ALA GLU HIS SEQRES 14 A 170 LYS SEQRES 1 C 170 HIS SER VAL LYS LEU ARG PRO LEU GLU ARG GLU ASP LEU SEQRES 2 C 170 ARG TYR VAL HIS GLN LEU ASP ASN ASN ALA SER VAL MET SEQRES 3 C 170 ARG TYR TRP PHE GLU GLU PRO TYR GLU ALA PHE VAL GLU SEQRES 4 C 170 LEU SER ASP LEU TYR ASP LYS HIS ILE HIS ASP GLN SER SEQRES 5 C 170 GLU ARG ARG PHE VAL VAL GLU CYS ASP GLY GLU LYS ALA SEQRES 6 C 170 GLY LEU VAL GLU LEU VAL GLU ILE ASN HIS VAL HIS ARG SEQRES 7 C 170 ARG ALA GLU PHE GLN ILE ILE ILE SER PRO GLU TYR GLN SEQRES 8 C 170 GLY LYS GLY LEU ALA THR ARG ALA ALA LYS LEU ALA MET SEQRES 9 C 170 ASP TYR GLY PHE THR VAL LEU ASN LEU TYR LYS LEU TYR SEQRES 10 C 170 LEU ILE VAL ASP LYS GLU ASN GLU LYS ALA ILE HIS ILE SEQRES 11 C 170 TYR ARG LYS LEU GLY PHE SER VAL GLU GLY GLU LEU MET SEQRES 12 C 170 HIS GLU PHE PHE ILE ASN GLY GLN TYR ARG ASN ALA ILE SEQRES 13 C 170 ARG MET CYS ILE PHE GLN HIS GLN TYR LEU ALA GLU HIS SEQRES 14 C 170 LYS SEQRES 1 B 170 HIS SER VAL LYS LEU ARG PRO LEU GLU ARG GLU ASP LEU SEQRES 2 B 170 ARG TYR VAL HIS GLN LEU ASP ASN ASN ALA SER VAL MET SEQRES 3 B 170 ARG TYR TRP PHE GLU GLU PRO TYR GLU ALA PHE VAL GLU SEQRES 4 B 170 LEU SER ASP LEU TYR ASP LYS HIS ILE HIS ASP GLN SER SEQRES 5 B 170 GLU ARG ARG PHE VAL VAL GLU CYS ASP GLY GLU LYS ALA SEQRES 6 B 170 GLY LEU VAL GLU LEU VAL GLU ILE ASN HIS VAL HIS ARG SEQRES 7 B 170 ARG ALA GLU PHE GLN ILE ILE ILE SER PRO GLU TYR GLN SEQRES 8 B 170 GLY LYS GLY LEU ALA THR ARG ALA ALA LYS LEU ALA MET SEQRES 9 B 170 ASP TYR GLY PHE THR VAL LEU ASN LEU TYR LYS LEU TYR SEQRES 10 B 170 LEU ILE VAL ASP LYS GLU ASN GLU LYS ALA ILE HIS ILE SEQRES 11 B 170 TYR ARG LYS LEU GLY PHE SER VAL GLU GLY GLU LEU MET SEQRES 12 B 170 HIS GLU PHE PHE ILE ASN GLY GLN TYR ARG ASN ALA ILE SEQRES 13 B 170 ARG MET CYS ILE PHE GLN HIS GLN TYR LEU ALA GLU HIS SEQRES 14 B 170 LYS SEQRES 1 D 170 HIS SER VAL LYS LEU ARG PRO LEU GLU ARG GLU ASP LEU SEQRES 2 D 170 ARG TYR VAL HIS GLN LEU ASP ASN ASN ALA SER VAL MET SEQRES 3 D 170 ARG TYR TRP PHE GLU GLU PRO TYR GLU ALA PHE VAL GLU SEQRES 4 D 170 LEU SER ASP LEU TYR ASP LYS HIS ILE HIS ASP GLN SER SEQRES 5 D 170 GLU ARG ARG PHE VAL VAL GLU CYS ASP GLY GLU LYS ALA SEQRES 6 D 170 GLY LEU VAL GLU LEU VAL GLU ILE ASN HIS VAL HIS ARG SEQRES 7 D 170 ARG ALA GLU PHE GLN ILE ILE ILE SER PRO GLU TYR GLN SEQRES 8 D 170 GLY LYS GLY LEU ALA THR ARG ALA ALA LYS LEU ALA MET SEQRES 9 D 170 ASP TYR GLY PHE THR VAL LEU ASN LEU TYR LYS LEU TYR SEQRES 10 D 170 LEU ILE VAL ASP LYS GLU ASN GLU LYS ALA ILE HIS ILE SEQRES 11 D 170 TYR ARG LYS LEU GLY PHE SER VAL GLU GLY GLU LEU MET SEQRES 12 D 170 HIS GLU PHE PHE ILE ASN GLY GLN TYR ARG ASN ALA ILE SEQRES 13 D 170 ARG MET CYS ILE PHE GLN HIS GLN TYR LEU ALA GLU HIS SEQRES 14 D 170 LYS HET SPD A 201 10 HET COA A 202 48 HET SPD C 201 10 HET COA C 202 48 HET SPD B 201 10 HET COA B 202 48 HET SPD D 201 10 HET COA D 202 48 HETNAM SPD SPERMIDINE HETNAM COA COENZYME A HETSYN SPD N-(2-AMINO-PROPYL)-1,4-DIAMINOBUTANE; PA(34) FORMUL 5 SPD 4(C7 H19 N3) FORMUL 6 COA 4(C21 H36 N7 O16 P3 S) FORMUL 13 HOH *170(H2 O) HELIX 1 1 GLU A 11 GLU A 13 5 3 HELIX 2 2 ASP A 14 ASN A 23 1 10 HELIX 3 3 ASN A 24 ARG A 29 1 6 HELIX 4 4 TYR A 30 PHE A 32 5 3 HELIX 5 5 ALA A 38 HIS A 49 1 12 HELIX 6 6 PRO A 90 GLN A 93 5 4 HELIX 7 7 GLY A 96 VAL A 112 1 17 HELIX 8 8 ASN A 126 LEU A 136 1 11 HELIX 9 9 GLN A 164 HIS A 171 1 8 HELIX 10 19 GLU C 11 GLU C 13 5 3 HELIX 11 20 ASP C 14 ASP C 22 1 9 HELIX 12 21 ASN C 24 TYR C 30 1 7 HELIX 13 22 ALA C 38 ILE C 50 1 13 HELIX 14 23 PRO C 90 GLN C 93 5 4 HELIX 15 24 GLY C 96 VAL C 112 1 17 HELIX 16 25 ASN C 126 LEU C 136 1 11 HELIX 17 26 GLN C 164 LYS C 172 1 9 HELIX 18 10 GLU B 11 GLU B 13 5 3 HELIX 19 11 ASP B 14 ASP B 22 1 9 HELIX 20 12 ASN B 24 ARG B 29 1 6 HELIX 21 13 TYR B 30 PHE B 32 5 3 HELIX 22 14 ALA B 38 ILE B 50 1 13 HELIX 23 15 PRO B 90 GLN B 93 5 4 HELIX 24 16 GLY B 96 VAL B 112 1 17 HELIX 25 17 ASN B 126 GLY B 137 1 12 HELIX 26 18 GLN B 164 HIS B 171 1 8 HELIX 27 27 GLU D 11 GLU D 13 5 3 HELIX 28 28 ASP D 14 ASP D 22 1 9 HELIX 29 29 ASN D 24 ARG D 29 1 6 HELIX 30 30 ALA D 38 ILE D 50 1 13 HELIX 31 31 PRO D 90 GLN D 93 5 4 HELIX 32 32 GLY D 96 VAL D 112 1 17 HELIX 33 33 ASN D 126 GLY D 137 1 12 HELIX 34 34 GLN D 164 ALA D 169 1 6 SHEET 1 A 7 VAL A 5 PRO A 9 0 SHEET 2 A 7 ARG A 56 CYS A 62 -1 O GLU A 61 N LYS A 6 SHEET 3 A 7 GLU A 65 ASN A 76 -1 O GLU A 65 N CYS A 62 SHEET 4 A 7 ARG A 81 ILE A 88 -1 O GLU A 83 N VAL A 73 SHEET 5 A 7 LYS A 117 ASP A 123 1 O TYR A 119 N PHE A 84 SHEET 6 A 7 GLN A 153 PHE A 163 -1 O ILE A 158 N VAL A 122 SHEET 7 A 7 SER A 139 ILE A 150 -1 N LEU A 144 O ALA A 157 SHEET 1 B 7 VAL B 5 PRO B 9 0 SHEET 2 B 7 ARG B 56 CYS B 62 -1 O VAL B 59 N ARG B 8 SHEET 3 B 7 GLU B 65 ASN B 76 -1 O VAL B 70 N PHE B 58 SHEET 4 B 7 ARG B 81 ILE B 88 -1 O ARG B 81 N ASN B 76 SHEET 5 B 7 LYS B 117 ASP B 123 1 O TYR B 119 N PHE B 84 SHEET 6 B 7 GLN B 153 PHE B 163 -1 O ILE B 158 N VAL B 122 SHEET 7 B 7 SER B 139 ILE B 150 -1 N GLU B 141 O ARG B 159 SHEET 1 C 7 VAL C 5 PRO C 9 0 SHEET 2 C 7 ARG C 56 CYS C 62 -1 O GLU C 61 N LYS C 6 SHEET 3 C 7 GLU C 65 ASN C 76 -1 O GLY C 68 N VAL C 60 SHEET 4 C 7 ARG C 81 ILE C 88 -1 O ARG C 81 N ASN C 76 SHEET 5 C 7 LYS C 117 ASP C 123 1 O TYR C 119 N PHE C 84 SHEET 6 C 7 GLN C 153 PHE C 163 -1 O ILE C 158 N VAL C 122 SHEET 7 C 7 SER C 139 ILE C 150 -1 N LEU C 144 O ALA C 157 SHEET 1 D 7 VAL D 5 PRO D 9 0 SHEET 2 D 7 ARG D 56 CYS D 62 -1 O VAL D 59 N ARG D 8 SHEET 3 D 7 GLY D 68 ASN D 76 -1 O GLY D 68 N VAL D 60 SHEET 4 D 7 ARG D 81 ILE D 88 -1 O ARG D 81 N ASN D 76 SHEET 5 D 7 LYS D 117 ASP D 123 1 O TYR D 119 N PHE D 84 SHEET 6 D 7 GLN D 153 PHE D 163 -1 O ILE D 158 N VAL D 122 SHEET 7 D 7 SER D 139 ILE D 150 -1 N LEU D 144 O ALA D 157 SITE 1 AC1 9 GLU A 33 GLU A 34 TYR A 36 GLU A 41 SITE 2 AC1 9 HOH A 331 HIS C 49 ILE C 50 ASP C 52 SITE 3 AC1 9 GLN C 53 SITE 1 AC2 14 TYR A 30 TRP A 31 ILE A 86 ILE A 87 SITE 2 AC2 14 ILE A 88 GLN A 93 GLY A 94 LYS A 95 SITE 3 AC2 14 GLY A 96 LEU A 97 ALA A 98 ILE A 121 SITE 4 AC2 14 LYS A 128 TYR A 133 SITE 1 AC3 9 HIS A 49 ILE A 50 ASP A 52 GLN A 53 SITE 2 AC3 9 HOH A 320 GLU C 33 GLU C 34 TYR C 36 SITE 3 AC3 9 GLU C 41 SITE 1 AC4 18 TYR C 30 TRP C 31 GLN C 85 ILE C 86 SITE 2 AC4 18 ILE C 88 GLN C 93 GLY C 94 LYS C 95 SITE 3 AC4 18 GLY C 96 LEU C 97 ALA C 98 THR C 99 SITE 4 AC4 18 ILE C 121 VAL C 122 GLU C 127 LYS C 128 SITE 5 AC4 18 HIS C 131 TYR C 133 SITE 1 AC5 8 TYR B 36 GLU B 41 HIS D 49 ILE D 50 SITE 2 AC5 8 ASP D 52 GLN D 53 GLU D 55 HOH D 312 SITE 1 AC6 20 TYR B 30 TRP B 31 GLN B 85 ILE B 86 SITE 2 AC6 20 ILE B 88 GLN B 93 GLY B 94 LYS B 95 SITE 3 AC6 20 GLY B 96 LEU B 97 ALA B 98 THR B 99 SITE 4 AC6 20 ILE B 121 ASN B 126 GLU B 127 LYS B 128 SITE 5 AC6 20 HIS B 131 TYR B 133 LYS B 135 HOH B 320 SITE 1 AC7 9 HIS B 49 ILE B 50 ASP B 52 GLN B 53 SITE 2 AC7 9 GLU B 55 GLU D 33 GLU D 34 TYR D 36 SITE 3 AC7 9 GLU D 41 SITE 1 AC8 20 TYR D 30 ILE D 86 ILE D 87 ILE D 88 SITE 2 AC8 20 GLN D 93 GLY D 94 LYS D 95 GLY D 96 SITE 3 AC8 20 LEU D 97 ALA D 98 THR D 99 VAL D 122 SITE 4 AC8 20 ASN D 126 LYS D 128 HIS D 131 ILE D 132 SITE 5 AC8 20 TYR D 133 LYS D 135 HOH D 316 HOH D 320 CRYST1 148.688 148.688 148.688 90.00 90.00 90.00 P 2 3 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006725 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006725 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006725 0.00000