HEADER HYDROLASE 23-APR-14 3WU9 TITLE SPATIOTEMPORAL DEVELOPMENT OF SOAKED PROTEIN CRYSTAL; DERIVATIVE 1580 TITLE 2 SEC COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME C; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: 1,4-BETA-N-ACETYLMURAMIDASE C, UNP RESIDUES 19-147; COMPND 5 SYNONYM: 1,4-BETA-N-ACETYLMURAMIDASE C, ALLERGEN GAL D IV; COMPND 6 EC: 3.2.1.17 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: BANTAM,CHICKENS; SOURCE 4 ORGANISM_TAXID: 9031 KEYWDS HEN EGG WHITE LYSOZYME (HEWL), BACTERIAL CELL WALL LYSIS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.MIZUTANI,R.SAIGA REVDAT 2 08-NOV-23 3WU9 1 REMARK LINK REVDAT 1 30-JUL-14 3WU9 0 JRNL AUTH R.MIZUTANI,Y.SHIMIZU,R.SAIGA,G.UENO,Y.NAKAMURA,A.TAKEUCHI, JRNL AUTH 2 K.UESUGI,Y.SUZUKI JRNL TITL SPATIOTEMPORAL DEVELOPMENT OF SOAKED PROTEIN CRYSTAL JRNL REF SCI REP V. 4 5731 2014 JRNL REFN ESSN 2045-2322 JRNL PMID 25043871 JRNL DOI 10.1038/SREP05731 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 8553 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 403 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 582 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.84 REMARK 3 BIN R VALUE (WORKING SET) : 0.1790 REMARK 3 BIN FREE R VALUE SET COUNT : 29 REMARK 3 BIN FREE R VALUE : 0.1900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1001 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 66 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.26000 REMARK 3 B22 (A**2) : -0.26000 REMARK 3 B33 (A**2) : 0.52000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.188 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.153 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.093 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.308 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1025 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1389 ; 1.545 ; 1.903 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 128 ; 6.274 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 50 ;37.742 ;23.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 166 ;17.021 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;22.823 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 144 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 794 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 515 ; 1.623 ; 1.717 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 642 ; 2.629 ; 2.559 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 510 ; 3.252 ; 2.208 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1608 ; 7.566 ;15.417 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 3WU9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000096799. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 300 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.07345 REMARK 200 MONOCHROMATOR : SI 111 DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8575 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08300 REMARK 200 FOR THE DATA SET : 22.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.28500 REMARK 200 FOR SHELL : 5.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2LYM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25MG/ML LYSOZYME, 0.05M SODIUM REMARK 280 ACETATE, 0.7M SODIUM CHLORIDE, PH 4.5, BATCH METHOD, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 18.91150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 39.63450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 39.63450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.36725 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 39.63450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 39.63450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 9.45575 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 39.63450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.63450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.36725 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 39.63450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 39.63450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 9.45575 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 18.91150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -153.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 18.91150 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 PT PT4 A 301 LIES ON A SPECIAL POSITION. REMARK 375 PT PT4 A 303 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 19 19.18 59.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 THE ORIGINAL NUMBERS OF HOHS HAVE BEEN RENUMBERED. FOR EXAMPLE, REMARK 600 HOH(130, CHAIN A) HAS BEEN CHANGED TO HOH(301, CHAIN A). REMARK 600 ORIGINAL RENUMBERED REMARK 600 HOH(130, CHAIN A) HOH(401, CHAIN A). REMARK 600 HOH(131, CHAIN A) HOH(402, CHAIN A). REMARK 600 HOH(132, CHAIN A) HOH(403, CHAIN A). REMARK 600 HOH(133, CHAIN A) HOH(404, CHAIN A). REMARK 600 HOH(134, CHAIN A) HOH(405, CHAIN A). REMARK 600 HOH(135, CHAIN A) HOH(406, CHAIN A). REMARK 600 HOH(136, CHAIN A) HOH(407, CHAIN A). REMARK 600 HOH(137, CHAIN A) HOH(408, CHAIN A). REMARK 600 HOH(138, CHAIN A) HOH(409, CHAIN A). REMARK 600 HOH(139, CHAIN A) HOH(410, CHAIN A). REMARK 600 HOH(140, CHAIN A) HOH(411, CHAIN A). REMARK 600 HOH(142, CHAIN A) HOH(412, CHAIN A). REMARK 600 HOH(143, CHAIN A) HOH(413, CHAIN A). REMARK 600 HOH(144, CHAIN A) HOH(414, CHAIN A). REMARK 600 HOH(145, CHAIN A) HOH(415, CHAIN A). REMARK 600 HOH(146, CHAIN A) HOH(416, CHAIN A). REMARK 600 HOH(147, CHAIN A) HOH(417, CHAIN A). REMARK 600 HOH(148, CHAIN A) HOH(418, CHAIN A). REMARK 600 HOH(149, CHAIN A) HOH(419, CHAIN A). REMARK 600 HOH(150, CHAIN A) HOH(420, CHAIN A). REMARK 600 HOH(151, CHAIN A) HOH(421, CHAIN A). REMARK 600 HOH(152, CHAIN A) HOH(422, CHAIN A). REMARK 600 HOH(154, CHAIN A) HOH(423, CHAIN A). REMARK 600 HOH(155, CHAIN A) HOH(424, CHAIN A). REMARK 600 HOH(156, CHAIN A) HOH(425, CHAIN A). REMARK 600 HOH(157, CHAIN A) HOH(426, CHAIN A). REMARK 600 HOH(158, CHAIN A) HOH(427, CHAIN A). REMARK 600 HOH(159, CHAIN A) HOH(428, CHAIN A). REMARK 600 HOH(160, CHAIN A) HOH(429, CHAIN A). REMARK 600 HOH(161, CHAIN A) HOH(430, CHAIN A). REMARK 600 HOH(162, CHAIN A) HOH(431, CHAIN A). REMARK 600 HOH(163, CHAIN A) HOH(432, CHAIN A). REMARK 600 HOH(166, CHAIN A) HOH(433, CHAIN A). REMARK 600 HOH(167, CHAIN A) HOH(434, CHAIN A). REMARK 600 HOH(168, CHAIN A) HOH(435, CHAIN A). REMARK 600 HOH(170, CHAIN A) HOH(436, CHAIN A). REMARK 600 HOH(171, CHAIN A) HOH(437, CHAIN A). REMARK 600 HOH(172, CHAIN A) HOH(438, CHAIN A). REMARK 600 HOH(173, CHAIN A) HOH(439, CHAIN A). REMARK 600 HOH(175, CHAIN A) HOH(440, CHAIN A). REMARK 600 HOH(176, CHAIN A) HOH(441, CHAIN A). REMARK 600 HOH(178, CHAIN A) HOH(442, CHAIN A). REMARK 600 HOH(181, CHAIN A) HOH(443, CHAIN A). REMARK 600 HOH(183, CHAIN A) HOH(444, CHAIN A). REMARK 600 HOH(187, CHAIN A) HOH(445, CHAIN A). REMARK 600 HOH(190, CHAIN A) HOH(446, CHAIN A). REMARK 600 HOH(191, CHAIN A) HOH(447, CHAIN A). REMARK 600 HOH(192, CHAIN A) HOH(448, CHAIN A). REMARK 600 HOH(195, CHAIN A) HOH(449, CHAIN A). REMARK 600 HOH(197, CHAIN A) HOH(450, CHAIN A). REMARK 600 HOH(200, CHAIN A) HOH(451, CHAIN A). REMARK 600 HOH(201, CHAIN A) HOH(452, CHAIN A). REMARK 600 HOH(205, CHAIN A) HOH(453, CHAIN A). REMARK 600 HOH(208, CHAIN A) HOH(454, CHAIN A). REMARK 600 HOH(209, CHAIN A) HOH(455, CHAIN A). REMARK 600 HOH(210, CHAIN A) HOH(456, CHAIN A). REMARK 600 HOH(218, CHAIN A) HOH(457, CHAIN A). REMARK 600 HOH(220, CHAIN A) HOH(458, CHAIN A). REMARK 600 HOH(223, CHAIN A) HOH(459, CHAIN A). REMARK 600 HOH(233, CHAIN A) HOH(460, CHAIN A). REMARK 600 HOH(239, CHAIN A) HOH(461, CHAIN A). REMARK 600 HOH(250, CHAIN A) HOH(462, CHAIN A). REMARK 600 HOH(251, CHAIN A) HOH(463, CHAIN A). REMARK 600 HOH(252, CHAIN A) HOH(464, CHAIN A). REMARK 600 HOH(261, CHAIN A) HOH(465, CHAIN A). REMARK 600 HOH(277, CHAIN A) HOH(466, CHAIN A). REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PT4 A 305 PT REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 14 NH1 REMARK 620 2 HOH A 433 O 152.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PT4 A 304 PT REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 65 OD1 REMARK 620 2 HOH A 412 O 83.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PT4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PT4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PT4 A 305 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WPJ RELATED DB: PDB REMARK 900 NATIVE STRUCTURE REMARK 900 RELATED ID: 3WU7 RELATED DB: PDB REMARK 900 DERIVATIVE AT 250 S REMARK 900 RELATED ID: 3WPK RELATED DB: PDB REMARK 900 DERIVATIVE AT 750 S REMARK 900 RELATED ID: 3WU8 RELATED DB: PDB REMARK 900 DERIVATIVE AT 1080 S REMARK 900 RELATED ID: 3WPL RELATED DB: PDB REMARK 900 DERIVATIVE AT 2510 S REMARK 900 RELATED ID: 3WUA RELATED DB: PDB REMARK 900 DERIVATIVE AT 3610 S DBREF 3WU9 A 1 129 UNP P00698 LYSC_CHICK 19 147 SEQRES 1 A 129 LYS VAL PHE GLY ARG CYS GLU LEU ALA ALA ALA MET LYS SEQRES 2 A 129 ARG HIS GLY LEU ASP ASN TYR ARG GLY TYR SER LEU GLY SEQRES 3 A 129 ASN TRP VAL CYS ALA ALA LYS PHE GLU SER ASN PHE ASN SEQRES 4 A 129 THR GLN ALA THR ASN ARG ASN THR ASP GLY SER THR ASP SEQRES 5 A 129 TYR GLY ILE LEU GLN ILE ASN SER ARG TRP TRP CYS ASN SEQRES 6 A 129 ASP GLY ARG THR PRO GLY SER ARG ASN LEU CYS ASN ILE SEQRES 7 A 129 PRO CYS SER ALA LEU LEU SER SER ASP ILE THR ALA SER SEQRES 8 A 129 VAL ASN CYS ALA LYS LYS ILE VAL SER ASP GLY ASN GLY SEQRES 9 A 129 MET ASN ALA TRP VAL ALA TRP ARG ASN ARG CYS LYS GLY SEQRES 10 A 129 THR ASP VAL GLN ALA TRP ILE ARG GLY CYS ARG LEU HET PT4 A 301 1 HET PT4 A 302 1 HET PT4 A 303 1 HET PT4 A 304 1 HET PT4 A 305 1 HETNAM PT4 PLATINUM (IV) ION FORMUL 2 PT4 5(PT 4+) FORMUL 7 HOH *66(H2 O) HELIX 1 1 GLY A 4 HIS A 15 1 12 HELIX 2 2 ASN A 19 TYR A 23 5 5 HELIX 3 3 SER A 24 ASN A 37 1 14 HELIX 4 4 PRO A 79 SER A 85 5 7 HELIX 5 5 ILE A 88 SER A 100 1 13 HELIX 6 6 ASN A 103 ALA A 107 5 5 HELIX 7 7 TRP A 108 CYS A 115 1 8 HELIX 8 8 ASP A 119 ARG A 125 5 7 SHEET 1 A 3 THR A 43 ARG A 45 0 SHEET 2 A 3 THR A 51 TYR A 53 -1 O ASP A 52 N ASN A 44 SHEET 3 A 3 ILE A 58 ASN A 59 -1 O ILE A 58 N TYR A 53 SSBOND 1 CYS A 6 CYS A 127 1555 1555 1.99 SSBOND 2 CYS A 30 CYS A 115 1555 1555 2.04 SSBOND 3 CYS A 64 CYS A 80 1555 1555 2.04 SSBOND 4 CYS A 76 CYS A 94 1555 1555 2.04 LINK NH1 ARG A 14 PT PT4 A 305 1555 1555 2.77 LINK OD1 ASN A 65 PT PT4 A 304 1555 1555 2.67 LINK PT PT4 A 304 O HOH A 412 1555 1555 2.69 LINK PT PT4 A 305 O HOH A 433 1555 1555 2.59 SITE 1 AC1 1 HOH A 462 SITE 1 AC2 5 ASN A 65 THR A 69 SER A 72 HOH A 412 SITE 2 AC2 5 HOH A 439 SITE 1 AC3 3 ARG A 14 HIS A 15 HOH A 433 CRYST1 79.269 79.269 37.823 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012615 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012615 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026439 0.00000