HEADER MOTOR PROTEIN 01-MAY-14 3WUQ TITLE STRUCTURE OF THE ENTIRE STALK REGION OF THE DYNEIN MOTOR DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOPLASMIC DYNEIN 1 HEAVY CHAIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: STALK DOMAIN, UNP RESIDUES 3207-3483; COMPND 5 SYNONYM: CYTOPLASMIC DYNEIN HEAVY CHAIN 1, DYNEIN HEAVY CHAIN, COMPND 6 CYTOSOLIC; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: DYNC1H1, DHC1, DNCH1, DNCHC1, DYHC; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MICROTUBULE, MOTOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.NISHIKAWA,T.OYAMA,N.KAMIYA,T.KON,Y.Y.TOYOSHIMA,H.NAKAMURA,G.KURISU REVDAT 3 20-MAR-24 3WUQ 1 SEQADV REVDAT 2 10-DEC-14 3WUQ 1 JRNL REVDAT 1 06-AUG-14 3WUQ 0 JRNL AUTH Y.NISHIKAWA,T.OYAMA,N.KAMIYA,T.KON,Y.Y.TOYOSHIMA,H.NAKAMURA, JRNL AUTH 2 G.KURISU JRNL TITL STRUCTURE OF THE ENTIRE STALK REGION OF THE DYNEIN MOTOR JRNL TITL 2 DOMAIN JRNL REF J.MOL.BIOL. V. 426 3232 2014 JRNL REFN ISSN 0022-2836 JRNL PMID 25058684 JRNL DOI 10.1016/J.JMB.2014.06.023 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 5530 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.280 REMARK 3 R VALUE (WORKING SET) : 0.279 REMARK 3 FREE R VALUE : 0.305 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.890 REMARK 3 FREE R VALUE TEST SET COUNT : 547 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.5775 - 5.5532 0.99 1301 139 0.2373 0.2393 REMARK 3 2 5.5532 - 4.4090 1.00 1241 135 0.3031 0.3562 REMARK 3 3 4.4090 - 3.8520 1.00 1229 138 0.2935 0.3595 REMARK 3 4 3.8520 - 3.5000 0.99 1212 135 0.3538 0.3915 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.570 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1983 REMARK 3 ANGLE : 1.121 2680 REMARK 3 CHIRALITY : 0.082 316 REMARK 3 PLANARITY : 0.005 353 REMARK 3 DIHEDRAL : 15.954 743 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3209 THROUGH 3296 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.9156 75.5377 20.7976 REMARK 3 T TENSOR REMARK 3 T11: 0.7567 T22: 0.4290 REMARK 3 T33: 0.5157 T12: -0.2924 REMARK 3 T13: 0.1737 T23: -0.2920 REMARK 3 L TENSOR REMARK 3 L11: 6.8811 L22: 5.4072 REMARK 3 L33: 1.3702 L12: 4.3015 REMARK 3 L13: -1.0794 L23: -1.9606 REMARK 3 S TENSOR REMARK 3 S11: 1.1373 S12: -0.1772 S13: -0.2111 REMARK 3 S21: 0.8738 S22: -0.0136 S23: 0.3213 REMARK 3 S31: -1.3990 S32: -0.1780 S33: 1.5335 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3297 THROUGH 3306 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4407 18.8158 14.8165 REMARK 3 T TENSOR REMARK 3 T11: 1.0164 T22: 1.2504 REMARK 3 T33: 1.5255 T12: 0.0193 REMARK 3 T13: 0.4034 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 1.9212 L22: 5.2618 REMARK 3 L33: 3.0615 L12: -3.0658 REMARK 3 L13: 2.4174 L23: -3.8029 REMARK 3 S TENSOR REMARK 3 S11: 0.9894 S12: -1.0010 S13: -1.4564 REMARK 3 S21: 0.2358 S22: 0.4307 S23: 0.1803 REMARK 3 S31: 1.3509 S32: 0.3596 S33: -0.5395 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3307 THROUGH 3376 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3885 34.8912 14.9760 REMARK 3 T TENSOR REMARK 3 T11: 1.2283 T22: 0.8867 REMARK 3 T33: 0.8554 T12: -0.3296 REMARK 3 T13: 0.0766 T23: 0.0142 REMARK 3 L TENSOR REMARK 3 L11: 5.2173 L22: 7.5117 REMARK 3 L33: 1.9028 L12: 4.0052 REMARK 3 L13: 0.3055 L23: -1.0035 REMARK 3 S TENSOR REMARK 3 S11: -0.6720 S12: 0.7586 S13: 0.6208 REMARK 3 S21: -1.6542 S22: 0.8829 S23: 0.9693 REMARK 3 S31: -0.2740 S32: -0.1411 S33: 0.0884 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3377 THROUGH 3464 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.1591 61.8957 19.6939 REMARK 3 T TENSOR REMARK 3 T11: 0.7000 T22: 0.4662 REMARK 3 T33: 0.4345 T12: -0.0426 REMARK 3 T13: 0.0759 T23: 0.0988 REMARK 3 L TENSOR REMARK 3 L11: 3.5608 L22: 5.6815 REMARK 3 L33: 0.7277 L12: 4.2203 REMARK 3 L13: -0.6994 L23: -0.0014 REMARK 3 S TENSOR REMARK 3 S11: 0.5294 S12: -0.5606 S13: 0.2432 REMARK 3 S21: 0.3200 S22: -0.2899 S23: 0.2675 REMARK 3 S31: -0.2025 S32: 0.0601 S33: -0.0764 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3465 THROUGH 3471 ) REMARK 3 ORIGIN FOR THE GROUP (A): 104.5690 107.3529 22.4950 REMARK 3 T TENSOR REMARK 3 T11: 4.8412 T22: 5.8286 REMARK 3 T33: 4.1682 T12: -0.0826 REMARK 3 T13: 2.6701 T23: 0.1160 REMARK 3 L TENSOR REMARK 3 L11: 0.0385 L22: 0.0389 REMARK 3 L33: 0.7139 L12: -0.0402 REMARK 3 L13: -0.1697 L23: 0.1673 REMARK 3 S TENSOR REMARK 3 S11: -0.1875 S12: 0.6236 S13: 0.2390 REMARK 3 S21: -0.5248 S22: 0.0906 S23: 0.0861 REMARK 3 S31: -0.0599 S32: 0.3883 S33: 0.0133 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3WUQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000096816. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5560 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.59800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 0.2M AMMONIUM PHOSPHATE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 23.02300 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.04600 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 46.04600 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 23.02300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 3207 REMARK 465 GLU A 3208 REMARK 465 ARG A 3472 REMARK 465 SER A 3473 REMARK 465 THR A 3474 REMARK 465 ALA A 3475 REMARK 465 LEU A 3476 REMARK 465 LEU A 3477 REMARK 465 LYS A 3478 REMARK 465 SER A 3479 REMARK 465 LEU A 3480 REMARK 465 SER A 3481 REMARK 465 ALA A 3482 REMARK 465 GLU A 3483 REMARK 465 HIS A 3484 REMARK 465 HIS A 3485 REMARK 465 HIS A 3486 REMARK 465 HIS A 3487 REMARK 465 HIS A 3488 REMARK 465 HIS A 3489 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A3218 CD NE CZ NH1 NH2 REMARK 470 ASP A3219 CG OD1 OD2 REMARK 470 LYS A3223 CE NZ REMARK 470 GLU A3226 CB CG CD OE1 OE2 REMARK 470 GLU A3228 CG CD OE1 OE2 REMARK 470 LYS A3230 CD CE NZ REMARK 470 ASP A3236 OD1 OD2 REMARK 470 LYS A3237 CG CD CE NZ REMARK 470 LYS A3239 CG CD CE NZ REMARK 470 VAL A3242 CG1 CG2 REMARK 470 LYS A3243 CG CD CE NZ REMARK 470 GLN A3246 CG CD OE1 NE2 REMARK 470 GLU A3257 OE1 OE2 REMARK 470 GLN A3259 CD OE1 NE2 REMARK 470 GLN A3261 OE1 NE2 REMARK 470 LEU A3280 CG CD1 CD2 REMARK 470 LYS A3282 CD CE NZ REMARK 470 GLN A3291 CG CD OE1 NE2 REMARK 470 LYS A3295 CD CE NZ REMARK 470 SER A3296 OG REMARK 470 LYS A3299 CD CE NZ REMARK 470 GLN A3300 CG CD OE1 NE2 REMARK 470 ARG A3306 NH1 NH2 REMARK 470 LYS A3316 CG CD CE NZ REMARK 470 SER A3329 OG REMARK 470 THR A3330 OG1 CG2 REMARK 470 GLN A3335 CG CD OE1 NE2 REMARK 470 SER A3338 OG REMARK 470 ILE A3339 CG1 CD1 REMARK 470 ILE A3340 CG1 CG2 CD1 REMARK 470 ARG A3342 NE CZ NH1 NH2 REMARK 470 ILE A3357 CG1 CG2 CD1 REMARK 470 ASN A3376 CG OD1 ND2 REMARK 470 GLU A3378 CG CD OE1 OE2 REMARK 470 SER A3384 OG REMARK 470 VAL A3391 CG2 REMARK 470 LYS A3392 CG CD CE NZ REMARK 470 LEU A3398 CD1 CD2 REMARK 470 TYR A3400 CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A3432 CG CD OE1 OE2 REMARK 470 ILE A3435 CD1 REMARK 470 LYS A3446 CG CD CE NZ REMARK 470 SER A3454 OG REMARK 470 ILE A3459 CG1 CG2 CD1 REMARK 470 LYS A3460 CD CE NZ REMARK 470 ASP A3462 CG OD1 OD2 REMARK 470 LYS A3469 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 3417 OD1 ASP A 3420 1.98 REMARK 500 OG SER A 3353 OE1 GLU A 3355 2.03 REMARK 500 OD1 ASN A 3372 OG SER A 3374 2.15 REMARK 500 O PHE A 3345 OG1 THR A 3348 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A3305 CB - CA - C ANGL. DEV. = -15.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A3355 0.11 -65.37 REMARK 500 TYR A3369 -73.22 -90.34 REMARK 500 PRO A3373 5.51 -67.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3VKG RELATED DB: PDB REMARK 900 RELATED ID: 3VKH RELATED DB: PDB DBREF 3WUQ A 3207 3483 UNP Q9JHU4 DYHC1_MOUSE 3207 3483 SEQADV 3WUQ HIS A 3484 UNP Q9JHU4 EXPRESSION TAG SEQADV 3WUQ HIS A 3485 UNP Q9JHU4 EXPRESSION TAG SEQADV 3WUQ HIS A 3486 UNP Q9JHU4 EXPRESSION TAG SEQADV 3WUQ HIS A 3487 UNP Q9JHU4 EXPRESSION TAG SEQADV 3WUQ HIS A 3488 UNP Q9JHU4 EXPRESSION TAG SEQADV 3WUQ HIS A 3489 UNP Q9JHU4 EXPRESSION TAG SEQRES 1 A 283 LYS GLU THR VAL ASP GLN VAL GLU GLU LEU ARG ARG ASP SEQRES 2 A 283 LEU ARG ILE LYS SER GLN GLU LEU GLU VAL LYS ASN ALA SEQRES 3 A 283 ALA ALA ASN ASP LYS LEU LYS LYS MET VAL LYS ASP GLN SEQRES 4 A 283 GLN GLU ALA GLU LYS LYS LYS VAL MET SER GLN GLU ILE SEQRES 5 A 283 GLN GLU GLN LEU HIS LYS GLN GLN GLU VAL ILE ALA ASP SEQRES 6 A 283 LYS GLN MET SER VAL LYS GLU ASP LEU ASP LYS VAL GLU SEQRES 7 A 283 PRO ALA VAL ILE GLU ALA GLN ASN ALA VAL LYS SER ILE SEQRES 8 A 283 LYS LYS GLN HIS LEU VAL GLU VAL ARG SER MET ALA ASN SEQRES 9 A 283 PRO PRO ALA ALA VAL LYS LEU ALA LEU GLU SER ILE CYS SEQRES 10 A 283 LEU LEU LEU GLY GLU SER THR THR ASP TRP LYS GLN ILE SEQRES 11 A 283 ARG SER ILE ILE MET ARG GLU ASN PHE ILE PRO THR ILE SEQRES 12 A 283 VAL ASN PHE SER ALA GLU GLU ILE SER ASP ALA ILE ARG SEQRES 13 A 283 GLU LYS MET LYS LYS ASN TYR MET SER ASN PRO SER TYR SEQRES 14 A 283 ASN TYR GLU ILE VAL ASN ARG ALA SER LEU ALA CYS GLY SEQRES 15 A 283 PRO MET VAL LYS TRP ALA ILE ALA GLN LEU ASN TYR ALA SEQRES 16 A 283 ASP MET LEU LYS ARG VAL GLU PRO LEU ARG ASN GLU LEU SEQRES 17 A 283 GLN LYS LEU GLU ASP ASP ALA LYS ASP ASN GLN GLN LYS SEQRES 18 A 283 ALA ASN GLU VAL GLU GLN MET ILE ARG ASP LEU GLU ALA SEQRES 19 A 283 SER ILE ALA ARG TYR LYS GLU GLU TYR ALA VAL LEU ILE SEQRES 20 A 283 SER GLU ALA GLN ALA ILE LYS ALA ASP LEU ALA ALA VAL SEQRES 21 A 283 GLU ALA LYS VAL ASN ARG SER THR ALA LEU LEU LYS SER SEQRES 22 A 283 LEU SER ALA GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 THR A 3209 GLU A 3284 1 76 HELIX 2 2 GLU A 3284 VAL A 3294 1 11 HELIX 3 3 LYS A 3298 SER A 3307 1 10 HELIX 4 4 PRO A 3312 LEU A 3326 1 15 HELIX 5 5 ASP A 3332 MET A 3341 1 10 HELIX 6 6 ASN A 3344 PHE A 3352 1 9 HELIX 7 7 SER A 3353 ILE A 3357 5 5 HELIX 8 8 ALA A 3360 TYR A 3369 1 10 HELIX 9 9 ASN A 3376 SER A 3384 1 9 HELIX 10 10 ALA A 3386 ASN A 3471 1 86 CRYST1 102.939 102.939 69.069 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009714 0.005609 0.000000 0.00000 SCALE2 0.000000 0.011217 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014478 0.00000