data_3WV0 # _entry.id 3WV0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3WV0 pdb_00003wv0 10.2210/pdb3wv0/pdb RCSB RCSB096826 ? ? WWPDB D_1000096826 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3WUZ _pdbx_database_related.details 'The same protein free form' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3WV0 _pdbx_database_status.recvd_initial_deposition_date 2014-05-10 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kuroki, K.' 1 'Wang, J.' 2 'Ose, T.' 3 'Yamaguchi, M.' 4 'Tabata, S.' 5 'Maita, N.' 6 'Nakamura, S.' 7 'Kajikawa, M.' 8 'Kogure, A.' 9 'Satoh, T.' 10 'Arase, H.' 11 'Maenaka, K.' 12 # _citation.id primary _citation.title 'Structural basis for simultaneous recognition of an O-glycan and its attached peptide of mucin family by immune receptor PILR alpha' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 111 _citation.page_first 8877 _citation.page_last 8882 _citation.year 2014 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24889612 _citation.pdbx_database_id_DOI 10.1073/pnas.1324105111 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kuroki, K.' 1 ? primary 'Wang, J.' 2 ? primary 'Ose, T.' 3 ? primary 'Yamaguchi, M.' 4 ? primary 'Tabata, S.' 5 ? primary 'Maita, N.' 6 ? primary 'Nakamura, S.' 7 ? primary 'Kajikawa, M.' 8 ? primary 'Kogure, A.' 9 ? primary 'Satoh, T.' 10 ? primary 'Arase, H.' 11 ? primary 'Maenaka, K.' 12 ? # _cell.entry_id 3WV0 _cell.length_a 50.313 _cell.length_b 155.887 _cell.length_c 67.354 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3WV0 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Paired immunoglobulin-like type 2 receptor alpha' 13967.697 2 ? R78G 'V-set domain, UNP residues 32-150' ? 2 polymer syn 'Envelope glycoprotein B' 609.671 2 ? ? 'O-glycan with attached peptide, UNP residues 50-56' ? 3 branched man 'N-acetyl-alpha-neuraminic acid-(2-6)-2-acetamido-2-deoxy-alpha-D-galactopyranose' 512.463 2 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 8 ? ? ? ? 5 water nat water 18.015 162 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'gB, gB-1, gB1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MLYGVTQPKHLSASMGGSVEIPFSFYYPWELATAPDVRISWRRGHFHGQSFYSTRPPSIHKDYVNRLFLNWTEGQKSGFL RISNLQKQDQSVYFCRVELDTRSSGRQQWQSIEGTKLSIT ; ;MLYGVTQPKHLSASMGGSVEIPFSFYYPWELATAPDVRISWRRGHFHGQSFYSTRPPSIHKDYVNRLFLNWTEGQKSGFL RISNLQKQDQSVYFCRVELDTRSSGRQQWQSIEGTKLSIT ; A,B ? 2 'polypeptide(L)' no no GPATPAP GPATPAP X,Y ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 TYR n 1 4 GLY n 1 5 VAL n 1 6 THR n 1 7 GLN n 1 8 PRO n 1 9 LYS n 1 10 HIS n 1 11 LEU n 1 12 SER n 1 13 ALA n 1 14 SER n 1 15 MET n 1 16 GLY n 1 17 GLY n 1 18 SER n 1 19 VAL n 1 20 GLU n 1 21 ILE n 1 22 PRO n 1 23 PHE n 1 24 SER n 1 25 PHE n 1 26 TYR n 1 27 TYR n 1 28 PRO n 1 29 TRP n 1 30 GLU n 1 31 LEU n 1 32 ALA n 1 33 THR n 1 34 ALA n 1 35 PRO n 1 36 ASP n 1 37 VAL n 1 38 ARG n 1 39 ILE n 1 40 SER n 1 41 TRP n 1 42 ARG n 1 43 ARG n 1 44 GLY n 1 45 HIS n 1 46 PHE n 1 47 HIS n 1 48 GLY n 1 49 GLN n 1 50 SER n 1 51 PHE n 1 52 TYR n 1 53 SER n 1 54 THR n 1 55 ARG n 1 56 PRO n 1 57 PRO n 1 58 SER n 1 59 ILE n 1 60 HIS n 1 61 LYS n 1 62 ASP n 1 63 TYR n 1 64 VAL n 1 65 ASN n 1 66 ARG n 1 67 LEU n 1 68 PHE n 1 69 LEU n 1 70 ASN n 1 71 TRP n 1 72 THR n 1 73 GLU n 1 74 GLY n 1 75 GLN n 1 76 LYS n 1 77 SER n 1 78 GLY n 1 79 PHE n 1 80 LEU n 1 81 ARG n 1 82 ILE n 1 83 SER n 1 84 ASN n 1 85 LEU n 1 86 GLN n 1 87 LYS n 1 88 GLN n 1 89 ASP n 1 90 GLN n 1 91 SER n 1 92 VAL n 1 93 TYR n 1 94 PHE n 1 95 CYS n 1 96 ARG n 1 97 VAL n 1 98 GLU n 1 99 LEU n 1 100 ASP n 1 101 THR n 1 102 ARG n 1 103 SER n 1 104 SER n 1 105 GLY n 1 106 ARG n 1 107 GLN n 1 108 GLN n 1 109 TRP n 1 110 GLN n 1 111 SER n 1 112 ILE n 1 113 GLU n 1 114 GLY n 1 115 THR n 1 116 LYS n 1 117 LEU n 1 118 SER n 1 119 ILE n 1 120 THR n 2 1 GLY n 2 2 PRO n 2 3 ALA n 2 4 THR n 2 5 PRO n 2 6 ALA n 2 7 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PILRA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGMT7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Human herpesvirus 1' _pdbx_entity_src_syn.organism_common_name HHV-1 _pdbx_entity_src_syn.ncbi_taxonomy_id 10306 _pdbx_entity_src_syn.details 'O-glycan with peptide derived from human herpesvirus 1' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP C9JGG1_HUMAN C9JGG1 1 ;LYGVTQPKHLSASMGGSVEIPFSFYYPWELATAPDVRISWRRGHFHRQSFYSTRPPSIHKDYVNRLFLNWTEGQKSGFLR ISNLQKQDQSVYFCRVELDTRSSGRQQWQSIEGTKLSIT ; 32 ? 2 UNP GB_HHV1K P06437 2 GPATPAP 50 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3WV0 A 2 ? 120 ? C9JGG1 32 ? 150 ? 32 150 2 1 3WV0 B 2 ? 120 ? C9JGG1 32 ? 150 ? 32 150 3 2 3WV0 X 1 ? 7 ? P06437 50 ? 56 ? 50 56 4 2 3WV0 Y 1 ? 7 ? P06437 50 ? 56 ? 50 56 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3WV0 MET A 1 ? UNP C9JGG1 ? ? 'expression tag' 31 1 1 3WV0 GLY A 48 ? UNP C9JGG1 ARG 78 'engineered mutation' 78 2 2 3WV0 MET B 1 ? UNP C9JGG1 ? ? 'expression tag' 31 3 2 3WV0 GLY B 48 ? UNP C9JGG1 ARG 78 'engineered mutation' 78 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A2G 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-galactopyranose ;N-acetyl-alpha-D-galactosamine; 2-acetamido-2-deoxy-alpha-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE ; 'C8 H15 N O6' 221.208 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SIA 'D-saccharide, alpha linking' . 'N-acetyl-alpha-neuraminic acid' 'N-acetylneuraminic acid; sialic acid; alpha-sialic acid; O-SIALIC ACID' 'C11 H19 N O9' 309.270 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3WV0 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.26 _exptl_crystal.density_percent_sol 45.69 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_details ;0.2 M ammonium sulfate 30% PEG 8000, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2009-01-16 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-5A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-5A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 3WV0 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 20 _reflns.d_resolution_high 2.3 _reflns.number_obs 12122 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.168 _reflns.pdbx_Rsym_value 0.156 _reflns.pdbx_netI_over_sigmaI 4.7 _reflns.B_iso_Wilson_estimate 13.473 _reflns.pdbx_redundancy 6.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.42 _reflns_shell.percent_possible_all 99.7 _reflns_shell.Rmerge_I_obs 0.567 _reflns_shell.pdbx_Rsym_value 0.512 _reflns_shell.meanI_over_sigI_obs 1.5 _reflns_shell.pdbx_redundancy 5.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3WV0 _refine.ls_number_reflns_obs 12109 _refine.ls_number_reflns_all 12150 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.0 _refine.ls_d_res_high 2.3 _refine.ls_percent_reflns_obs 99.7 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2310 _refine.ls_R_factor_R_free 0.2995 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 584 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 15.141 _refine.aniso_B[1][1] -1.534 _refine.aniso_B[2][2] -6.261 _refine.aniso_B[3][3] 7.795 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.000 _refine.aniso_B[2][3] -0.000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 3WUZ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2042 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 108 _refine_hist.number_atoms_solvent 162 _refine_hist.number_atoms_total 2312 _refine_hist.d_res_high 2.3 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id c_bond_d 0.006 ? ? ? ? 'X-RAY DIFFRACTION' c_angle_deg 1.2 ? ? ? ? 'X-RAY DIFFRACTION' c_dihedral_angle_d 24.6 ? ? ? ? 'X-RAY DIFFRACTION' c_improper_angle_d 0.85 ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.30 _refine_ls_shell.d_res_low 2.46 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.2796 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.4315 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 59 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1039 _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3WV0 _struct.title ;O-glycan attached to herpes simplex virus type 1 glycoprotein gB is recognized by the Ig V-set domain of human paired immunoglobulin-like type 2 receptor alpha ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3WV0 _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'Immunoglobulin-like, Immunological receptor, Membrane, MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 4 ? O N N 5 ? P N N 5 ? Q N N 5 ? R N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 86 ? GLN A 90 ? GLN A 116 GLN A 120 5 ? 5 HELX_P HELX_P2 2 GLN B 86 ? GLN B 90 ? GLN B 116 GLN B 120 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? C THR 4 OG1 ? ? ? 1_555 E A2G . C1 ? ? X THR 53 C A2G 1 1_555 ? ? ? ? ? ? ? 1.388 ? O-Glycosylation covale2 covale one ? D THR 4 OG1 ? ? ? 1_555 F A2G . C1 ? ? Y THR 53 D A2G 1 1_555 ? ? ? ? ? ? ? 1.385 ? O-Glycosylation covale3 covale both ? E A2G . O6 ? ? ? 1_555 E SIA . C2 ? ? C A2G 1 C SIA 2 1_555 ? ? ? ? ? ? ? 1.389 ? ? covale4 covale both ? F A2G . O6 ? ? ? 1_555 F SIA . C2 ? ? D A2G 1 D SIA 2 1_555 ? ? ? ? ? ? ? 1.385 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ARG 55 A . ? ARG 85 A PRO 56 A ? PRO 86 A 1 -0.46 2 ARG 55 B . ? ARG 85 B PRO 56 B ? PRO 86 B 1 -0.51 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? C ? 4 ? D ? 4 ? E ? 5 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel F 1 2 ? parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 4 ? THR A 6 ? GLY A 34 THR A 36 A 2 VAL A 19 ? TYR A 26 ? VAL A 49 TYR A 56 A 3 SER A 77 ? ILE A 82 ? SER A 107 ILE A 112 A 4 LEU A 67 ? ASN A 70 ? LEU A 97 ASN A 100 B 1 HIS A 10 ? SER A 12 ? HIS A 40 SER A 42 B 2 THR A 115 ? SER A 118 ? THR A 145 SER A 148 B 3 SER A 91 ? ASP A 100 ? SER A 121 ASP A 130 B 4 ARG A 38 ? ARG A 43 ? ARG A 68 ARG A 73 B 5 TYR A 52 ? SER A 53 ? TYR A 82 SER A 83 B 6 SER A 58 ? ILE A 59 ? SER A 88 ILE A 89 C 1 HIS A 10 ? SER A 12 ? HIS A 40 SER A 42 C 2 THR A 115 ? SER A 118 ? THR A 145 SER A 148 C 3 SER A 91 ? ASP A 100 ? SER A 121 ASP A 130 C 4 ARG A 106 ? GLN A 110 ? ARG A 136 GLN A 140 D 1 GLY B 4 ? THR B 6 ? GLY B 34 THR B 36 D 2 VAL B 19 ? TYR B 26 ? VAL B 49 TYR B 56 D 3 SER B 77 ? ILE B 82 ? SER B 107 ILE B 112 D 4 LEU B 67 ? ASN B 70 ? LEU B 97 ASN B 100 E 1 HIS B 10 ? SER B 12 ? HIS B 40 SER B 42 E 2 THR B 115 ? SER B 118 ? THR B 145 SER B 148 E 3 VAL B 92 ? ASP B 100 ? VAL B 122 ASP B 130 E 4 ARG B 38 ? ARG B 43 ? ARG B 68 ARG B 73 E 5 TYR B 52 ? SER B 53 ? TYR B 82 SER B 83 F 1 HIS B 10 ? SER B 12 ? HIS B 40 SER B 42 F 2 THR B 115 ? SER B 118 ? THR B 145 SER B 148 F 3 VAL B 92 ? ASP B 100 ? VAL B 122 ASP B 130 F 4 ARG B 106 ? GLN B 110 ? ARG B 136 GLN B 140 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 6 ? N THR A 36 O SER A 24 ? O SER A 54 A 2 3 N ILE A 21 ? N ILE A 51 O LEU A 80 ? O LEU A 110 A 3 4 O PHE A 79 ? O PHE A 109 N ASN A 70 ? N ASN A 100 B 1 2 N LEU A 11 ? N LEU A 41 O LYS A 116 ? O LYS A 146 B 2 3 O THR A 115 ? O THR A 145 N TYR A 93 ? N TYR A 123 B 3 4 O PHE A 94 ? O PHE A 124 N ARG A 42 ? N ARG A 72 B 4 5 N TRP A 41 ? N TRP A 71 O TYR A 52 ? O TYR A 82 B 5 6 N SER A 53 ? N SER A 83 O SER A 58 ? O SER A 88 C 1 2 N LEU A 11 ? N LEU A 41 O LYS A 116 ? O LYS A 146 C 2 3 O THR A 115 ? O THR A 145 N TYR A 93 ? N TYR A 123 C 3 4 N VAL A 97 ? N VAL A 127 O TRP A 109 ? O TRP A 139 D 1 2 N THR B 6 ? N THR B 36 O SER B 24 ? O SER B 54 D 2 3 N ILE B 21 ? N ILE B 51 O LEU B 80 ? O LEU B 110 D 3 4 O ARG B 81 ? O ARG B 111 N PHE B 68 ? N PHE B 98 E 1 2 N LEU B 11 ? N LEU B 41 O LYS B 116 ? O LYS B 146 E 2 3 O THR B 115 ? O THR B 145 N TYR B 93 ? N TYR B 123 E 3 4 O PHE B 94 ? O PHE B 124 N ARG B 42 ? N ARG B 72 E 4 5 N TRP B 41 ? N TRP B 71 O TYR B 52 ? O TYR B 82 F 1 2 N LEU B 11 ? N LEU B 41 O LYS B 116 ? O LYS B 146 F 2 3 O THR B 115 ? O THR B 145 N TYR B 93 ? N TYR B 123 F 3 4 N VAL B 97 ? N VAL B 127 O TRP B 109 ? O TRP B 139 # _database_PDB_matrix.entry_id 3WV0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3WV0 _atom_sites.fract_transf_matrix[1][1] 0.019876 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006415 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014847 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 31 31 MET MET A . n A 1 2 LEU 2 32 32 LEU LEU A . n A 1 3 TYR 3 33 33 TYR TYR A . n A 1 4 GLY 4 34 34 GLY GLY A . n A 1 5 VAL 5 35 35 VAL VAL A . n A 1 6 THR 6 36 36 THR THR A . n A 1 7 GLN 7 37 37 GLN GLN A . n A 1 8 PRO 8 38 38 PRO PRO A . n A 1 9 LYS 9 39 39 LYS LYS A . n A 1 10 HIS 10 40 40 HIS HIS A . n A 1 11 LEU 11 41 41 LEU LEU A . n A 1 12 SER 12 42 42 SER SER A . n A 1 13 ALA 13 43 43 ALA ALA A . n A 1 14 SER 14 44 44 SER SER A . n A 1 15 MET 15 45 45 MET MET A . n A 1 16 GLY 16 46 46 GLY GLY A . n A 1 17 GLY 17 47 47 GLY GLY A . n A 1 18 SER 18 48 48 SER SER A . n A 1 19 VAL 19 49 49 VAL VAL A . n A 1 20 GLU 20 50 50 GLU GLU A . n A 1 21 ILE 21 51 51 ILE ILE A . n A 1 22 PRO 22 52 52 PRO PRO A . n A 1 23 PHE 23 53 53 PHE PHE A . n A 1 24 SER 24 54 54 SER SER A . n A 1 25 PHE 25 55 55 PHE PHE A . n A 1 26 TYR 26 56 56 TYR TYR A . n A 1 27 TYR 27 57 57 TYR TYR A . n A 1 28 PRO 28 58 58 PRO PRO A . n A 1 29 TRP 29 59 59 TRP TRP A . n A 1 30 GLU 30 60 60 GLU GLU A . n A 1 31 LEU 31 61 61 LEU LEU A . n A 1 32 ALA 32 62 62 ALA ALA A . n A 1 33 THR 33 63 63 THR THR A . n A 1 34 ALA 34 64 64 ALA ALA A . n A 1 35 PRO 35 65 65 PRO PRO A . n A 1 36 ASP 36 66 66 ASP ASP A . n A 1 37 VAL 37 67 67 VAL VAL A . n A 1 38 ARG 38 68 68 ARG ARG A . n A 1 39 ILE 39 69 69 ILE ILE A . n A 1 40 SER 40 70 70 SER SER A . n A 1 41 TRP 41 71 71 TRP TRP A . n A 1 42 ARG 42 72 72 ARG ARG A . n A 1 43 ARG 43 73 73 ARG ARG A . n A 1 44 GLY 44 74 74 GLY GLY A . n A 1 45 HIS 45 75 75 HIS HIS A . n A 1 46 PHE 46 76 76 PHE PHE A . n A 1 47 HIS 47 77 77 HIS HIS A . n A 1 48 GLY 48 78 78 GLY GLY A . n A 1 49 GLN 49 79 79 GLN GLN A . n A 1 50 SER 50 80 80 SER SER A . n A 1 51 PHE 51 81 81 PHE PHE A . n A 1 52 TYR 52 82 82 TYR TYR A . n A 1 53 SER 53 83 83 SER SER A . n A 1 54 THR 54 84 84 THR THR A . n A 1 55 ARG 55 85 85 ARG ARG A . n A 1 56 PRO 56 86 86 PRO PRO A . n A 1 57 PRO 57 87 87 PRO PRO A . n A 1 58 SER 58 88 88 SER SER A . n A 1 59 ILE 59 89 89 ILE ILE A . n A 1 60 HIS 60 90 90 HIS HIS A . n A 1 61 LYS 61 91 91 LYS LYS A . n A 1 62 ASP 62 92 92 ASP ASP A . n A 1 63 TYR 63 93 93 TYR TYR A . n A 1 64 VAL 64 94 94 VAL VAL A . n A 1 65 ASN 65 95 95 ASN ASN A . n A 1 66 ARG 66 96 96 ARG ARG A . n A 1 67 LEU 67 97 97 LEU LEU A . n A 1 68 PHE 68 98 98 PHE PHE A . n A 1 69 LEU 69 99 99 LEU LEU A . n A 1 70 ASN 70 100 100 ASN ASN A . n A 1 71 TRP 71 101 101 TRP TRP A . n A 1 72 THR 72 102 102 THR THR A . n A 1 73 GLU 73 103 103 GLU GLU A . n A 1 74 GLY 74 104 104 GLY GLY A . n A 1 75 GLN 75 105 105 GLN GLN A . n A 1 76 LYS 76 106 106 LYS LYS A . n A 1 77 SER 77 107 107 SER SER A . n A 1 78 GLY 78 108 108 GLY GLY A . n A 1 79 PHE 79 109 109 PHE PHE A . n A 1 80 LEU 80 110 110 LEU LEU A . n A 1 81 ARG 81 111 111 ARG ARG A . n A 1 82 ILE 82 112 112 ILE ILE A . n A 1 83 SER 83 113 113 SER SER A . n A 1 84 ASN 84 114 114 ASN ASN A . n A 1 85 LEU 85 115 115 LEU LEU A . n A 1 86 GLN 86 116 116 GLN GLN A . n A 1 87 LYS 87 117 117 LYS LYS A . n A 1 88 GLN 88 118 118 GLN GLN A . n A 1 89 ASP 89 119 119 ASP ASP A . n A 1 90 GLN 90 120 120 GLN GLN A . n A 1 91 SER 91 121 121 SER SER A . n A 1 92 VAL 92 122 122 VAL VAL A . n A 1 93 TYR 93 123 123 TYR TYR A . n A 1 94 PHE 94 124 124 PHE PHE A . n A 1 95 CYS 95 125 125 CYS CYS A . n A 1 96 ARG 96 126 126 ARG ARG A . n A 1 97 VAL 97 127 127 VAL VAL A . n A 1 98 GLU 98 128 128 GLU GLU A . n A 1 99 LEU 99 129 129 LEU LEU A . n A 1 100 ASP 100 130 130 ASP ASP A . n A 1 101 THR 101 131 131 THR THR A . n A 1 102 ARG 102 132 132 ARG ARG A . n A 1 103 SER 103 133 133 SER SER A . n A 1 104 SER 104 134 134 SER SER A . n A 1 105 GLY 105 135 135 GLY GLY A . n A 1 106 ARG 106 136 136 ARG ARG A . n A 1 107 GLN 107 137 137 GLN GLN A . n A 1 108 GLN 108 138 138 GLN GLN A . n A 1 109 TRP 109 139 139 TRP TRP A . n A 1 110 GLN 110 140 140 GLN GLN A . n A 1 111 SER 111 141 141 SER SER A . n A 1 112 ILE 112 142 142 ILE ILE A . n A 1 113 GLU 113 143 143 GLU GLU A . n A 1 114 GLY 114 144 144 GLY GLY A . n A 1 115 THR 115 145 145 THR THR A . n A 1 116 LYS 116 146 146 LYS LYS A . n A 1 117 LEU 117 147 147 LEU LEU A . n A 1 118 SER 118 148 148 SER SER A . n A 1 119 ILE 119 149 149 ILE ILE A . n A 1 120 THR 120 150 ? ? ? A . n B 1 1 MET 1 31 31 MET MET B . n B 1 2 LEU 2 32 32 LEU LEU B . n B 1 3 TYR 3 33 33 TYR TYR B . n B 1 4 GLY 4 34 34 GLY GLY B . n B 1 5 VAL 5 35 35 VAL VAL B . n B 1 6 THR 6 36 36 THR THR B . n B 1 7 GLN 7 37 37 GLN GLN B . n B 1 8 PRO 8 38 38 PRO PRO B . n B 1 9 LYS 9 39 39 LYS LYS B . n B 1 10 HIS 10 40 40 HIS HIS B . n B 1 11 LEU 11 41 41 LEU LEU B . n B 1 12 SER 12 42 42 SER SER B . n B 1 13 ALA 13 43 43 ALA ALA B . n B 1 14 SER 14 44 44 SER SER B . n B 1 15 MET 15 45 45 MET MET B . n B 1 16 GLY 16 46 46 GLY GLY B . n B 1 17 GLY 17 47 47 GLY GLY B . n B 1 18 SER 18 48 48 SER SER B . n B 1 19 VAL 19 49 49 VAL VAL B . n B 1 20 GLU 20 50 50 GLU GLU B . n B 1 21 ILE 21 51 51 ILE ILE B . n B 1 22 PRO 22 52 52 PRO PRO B . n B 1 23 PHE 23 53 53 PHE PHE B . n B 1 24 SER 24 54 54 SER SER B . n B 1 25 PHE 25 55 55 PHE PHE B . n B 1 26 TYR 26 56 56 TYR TYR B . n B 1 27 TYR 27 57 57 TYR TYR B . n B 1 28 PRO 28 58 58 PRO PRO B . n B 1 29 TRP 29 59 59 TRP TRP B . n B 1 30 GLU 30 60 60 GLU GLU B . n B 1 31 LEU 31 61 61 LEU LEU B . n B 1 32 ALA 32 62 62 ALA ALA B . n B 1 33 THR 33 63 63 THR THR B . n B 1 34 ALA 34 64 64 ALA ALA B . n B 1 35 PRO 35 65 65 PRO PRO B . n B 1 36 ASP 36 66 66 ASP ASP B . n B 1 37 VAL 37 67 67 VAL VAL B . n B 1 38 ARG 38 68 68 ARG ARG B . n B 1 39 ILE 39 69 69 ILE ILE B . n B 1 40 SER 40 70 70 SER SER B . n B 1 41 TRP 41 71 71 TRP TRP B . n B 1 42 ARG 42 72 72 ARG ARG B . n B 1 43 ARG 43 73 73 ARG ARG B . n B 1 44 GLY 44 74 74 GLY GLY B . n B 1 45 HIS 45 75 75 HIS HIS B . n B 1 46 PHE 46 76 76 PHE PHE B . n B 1 47 HIS 47 77 77 HIS HIS B . n B 1 48 GLY 48 78 78 GLY GLY B . n B 1 49 GLN 49 79 79 GLN GLN B . n B 1 50 SER 50 80 80 SER SER B . n B 1 51 PHE 51 81 81 PHE PHE B . n B 1 52 TYR 52 82 82 TYR TYR B . n B 1 53 SER 53 83 83 SER SER B . n B 1 54 THR 54 84 84 THR THR B . n B 1 55 ARG 55 85 85 ARG ARG B . n B 1 56 PRO 56 86 86 PRO PRO B . n B 1 57 PRO 57 87 87 PRO PRO B . n B 1 58 SER 58 88 88 SER SER B . n B 1 59 ILE 59 89 89 ILE ILE B . n B 1 60 HIS 60 90 90 HIS HIS B . n B 1 61 LYS 61 91 91 LYS LYS B . n B 1 62 ASP 62 92 92 ASP ASP B . n B 1 63 TYR 63 93 93 TYR TYR B . n B 1 64 VAL 64 94 94 VAL VAL B . n B 1 65 ASN 65 95 95 ASN ASN B . n B 1 66 ARG 66 96 96 ARG ARG B . n B 1 67 LEU 67 97 97 LEU LEU B . n B 1 68 PHE 68 98 98 PHE PHE B . n B 1 69 LEU 69 99 99 LEU LEU B . n B 1 70 ASN 70 100 100 ASN ASN B . n B 1 71 TRP 71 101 101 TRP TRP B . n B 1 72 THR 72 102 102 THR THR B . n B 1 73 GLU 73 103 103 GLU GLU B . n B 1 74 GLY 74 104 104 GLY GLY B . n B 1 75 GLN 75 105 105 GLN GLN B . n B 1 76 LYS 76 106 106 LYS LYS B . n B 1 77 SER 77 107 107 SER SER B . n B 1 78 GLY 78 108 108 GLY GLY B . n B 1 79 PHE 79 109 109 PHE PHE B . n B 1 80 LEU 80 110 110 LEU LEU B . n B 1 81 ARG 81 111 111 ARG ARG B . n B 1 82 ILE 82 112 112 ILE ILE B . n B 1 83 SER 83 113 113 SER SER B . n B 1 84 ASN 84 114 114 ASN ASN B . n B 1 85 LEU 85 115 115 LEU LEU B . n B 1 86 GLN 86 116 116 GLN GLN B . n B 1 87 LYS 87 117 117 LYS LYS B . n B 1 88 GLN 88 118 118 GLN GLN B . n B 1 89 ASP 89 119 119 ASP ASP B . n B 1 90 GLN 90 120 120 GLN GLN B . n B 1 91 SER 91 121 121 SER SER B . n B 1 92 VAL 92 122 122 VAL VAL B . n B 1 93 TYR 93 123 123 TYR TYR B . n B 1 94 PHE 94 124 124 PHE PHE B . n B 1 95 CYS 95 125 125 CYS CYS B . n B 1 96 ARG 96 126 126 ARG ARG B . n B 1 97 VAL 97 127 127 VAL VAL B . n B 1 98 GLU 98 128 128 GLU GLU B . n B 1 99 LEU 99 129 129 LEU LEU B . n B 1 100 ASP 100 130 130 ASP ASP B . n B 1 101 THR 101 131 131 THR THR B . n B 1 102 ARG 102 132 132 ARG ARG B . n B 1 103 SER 103 133 133 SER SER B . n B 1 104 SER 104 134 134 SER SER B . n B 1 105 GLY 105 135 135 GLY GLY B . n B 1 106 ARG 106 136 136 ARG ARG B . n B 1 107 GLN 107 137 137 GLN GLN B . n B 1 108 GLN 108 138 138 GLN GLN B . n B 1 109 TRP 109 139 139 TRP TRP B . n B 1 110 GLN 110 140 140 GLN GLN B . n B 1 111 SER 111 141 141 SER SER B . n B 1 112 ILE 112 142 142 ILE ILE B . n B 1 113 GLU 113 143 143 GLU GLU B . n B 1 114 GLY 114 144 144 GLY GLY B . n B 1 115 THR 115 145 145 THR THR B . n B 1 116 LYS 116 146 146 LYS LYS B . n B 1 117 LEU 117 147 147 LEU LEU B . n B 1 118 SER 118 148 148 SER SER B . n B 1 119 ILE 119 149 149 ILE ILE B . n B 1 120 THR 120 150 ? ? ? B . n C 2 1 GLY 1 50 50 GLY GLY X . n C 2 2 PRO 2 51 51 PRO PRO X . n C 2 3 ALA 3 52 52 ALA ALA X . n C 2 4 THR 4 53 53 THR THR X . n C 2 5 PRO 5 54 54 PRO PRO X . n C 2 6 ALA 6 55 55 ALA ALA X . n C 2 7 PRO 7 56 56 PRO PRO X . n D 2 1 GLY 1 50 ? ? ? Y . n D 2 2 PRO 2 51 51 PRO PRO Y . n D 2 3 ALA 3 52 52 ALA ALA Y . n D 2 4 THR 4 53 53 THR THR Y . n D 2 5 PRO 5 54 54 PRO PRO Y . n D 2 6 ALA 6 55 55 ALA ALA Y . n D 2 7 PRO 7 56 56 PRO PRO Y . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 SO4 1 201 3 SO4 SO4 A . H 4 SO4 1 202 5 SO4 SO4 A . I 4 SO4 1 203 9 SO4 SO4 A . J 4 SO4 1 201 2 SO4 SO4 B . K 4 SO4 1 202 4 SO4 SO4 B . L 4 SO4 1 203 6 SO4 SO4 B . M 4 SO4 1 204 7 SO4 SO4 B . N 4 SO4 1 205 8 SO4 SO4 B . O 5 HOH 1 301 2 HOH TIP A . O 5 HOH 2 302 3 HOH TIP A . O 5 HOH 3 303 9 HOH TIP A . O 5 HOH 4 304 10 HOH TIP A . O 5 HOH 5 305 11 HOH TIP A . O 5 HOH 6 306 12 HOH TIP A . O 5 HOH 7 307 14 HOH TIP A . O 5 HOH 8 308 16 HOH TIP A . O 5 HOH 9 309 19 HOH TIP A . O 5 HOH 10 310 21 HOH TIP A . O 5 HOH 11 311 23 HOH TIP A . O 5 HOH 12 312 24 HOH TIP A . O 5 HOH 13 313 27 HOH TIP A . O 5 HOH 14 314 29 HOH TIP A . O 5 HOH 15 315 31 HOH TIP A . O 5 HOH 16 316 40 HOH TIP A . O 5 HOH 17 317 42 HOH TIP A . O 5 HOH 18 318 44 HOH TIP A . O 5 HOH 19 319 45 HOH TIP A . O 5 HOH 20 320 46 HOH TIP A . O 5 HOH 21 321 47 HOH TIP A . O 5 HOH 22 322 48 HOH TIP A . O 5 HOH 23 323 50 HOH TIP A . O 5 HOH 24 324 52 HOH TIP A . O 5 HOH 25 325 53 HOH TIP A . O 5 HOH 26 326 55 HOH TIP A . O 5 HOH 27 327 59 HOH TIP A . O 5 HOH 28 328 60 HOH TIP A . O 5 HOH 29 329 61 HOH TIP A . O 5 HOH 30 330 64 HOH TIP A . O 5 HOH 31 331 65 HOH TIP A . O 5 HOH 32 332 68 HOH TIP A . O 5 HOH 33 333 70 HOH TIP A . O 5 HOH 34 334 72 HOH TIP A . O 5 HOH 35 335 74 HOH TIP A . O 5 HOH 36 336 78 HOH TIP A . O 5 HOH 37 337 81 HOH TIP A . O 5 HOH 38 338 83 HOH TIP A . O 5 HOH 39 339 84 HOH TIP A . O 5 HOH 40 340 85 HOH TIP A . O 5 HOH 41 341 91 HOH TIP A . O 5 HOH 42 342 92 HOH TIP A . O 5 HOH 43 343 94 HOH TIP A . O 5 HOH 44 344 96 HOH TIP A . O 5 HOH 45 345 99 HOH TIP A . O 5 HOH 46 346 101 HOH TIP A . O 5 HOH 47 347 105 HOH TIP A . O 5 HOH 48 348 106 HOH TIP A . O 5 HOH 49 349 109 HOH TIP A . O 5 HOH 50 350 110 HOH TIP A . O 5 HOH 51 351 111 HOH TIP A . O 5 HOH 52 352 114 HOH TIP A . O 5 HOH 53 353 122 HOH TIP A . O 5 HOH 54 354 126 HOH TIP A . O 5 HOH 55 355 128 HOH TIP A . O 5 HOH 56 356 133 HOH TIP A . O 5 HOH 57 357 134 HOH TIP A . O 5 HOH 58 358 135 HOH TIP A . O 5 HOH 59 359 136 HOH TIP A . O 5 HOH 60 360 142 HOH TIP A . O 5 HOH 61 361 143 HOH TIP A . O 5 HOH 62 362 144 HOH TIP A . O 5 HOH 63 363 145 HOH TIP A . O 5 HOH 64 364 153 HOH TIP A . O 5 HOH 65 365 154 HOH TIP A . O 5 HOH 66 366 162 HOH TIP A . O 5 HOH 67 367 167 HOH TIP A . O 5 HOH 68 368 171 HOH TIP A . P 5 HOH 1 301 1 HOH TIP B . P 5 HOH 2 302 4 HOH TIP B . P 5 HOH 3 303 5 HOH TIP B . P 5 HOH 4 304 6 HOH TIP B . P 5 HOH 5 305 7 HOH TIP B . P 5 HOH 6 306 13 HOH TIP B . P 5 HOH 7 307 15 HOH TIP B . P 5 HOH 8 308 17 HOH TIP B . P 5 HOH 9 309 20 HOH TIP B . P 5 HOH 10 310 25 HOH TIP B . P 5 HOH 11 311 26 HOH TIP B . P 5 HOH 12 312 28 HOH TIP B . P 5 HOH 13 313 30 HOH TIP B . P 5 HOH 14 314 32 HOH TIP B . P 5 HOH 15 315 34 HOH TIP B . P 5 HOH 16 316 35 HOH TIP B . P 5 HOH 17 317 36 HOH TIP B . P 5 HOH 18 318 37 HOH TIP B . P 5 HOH 19 319 41 HOH TIP B . P 5 HOH 20 320 43 HOH TIP B . P 5 HOH 21 321 51 HOH TIP B . P 5 HOH 22 322 54 HOH TIP B . P 5 HOH 23 323 56 HOH TIP B . P 5 HOH 24 324 62 HOH TIP B . P 5 HOH 25 325 63 HOH TIP B . P 5 HOH 26 326 66 HOH TIP B . P 5 HOH 27 327 67 HOH TIP B . P 5 HOH 28 328 71 HOH TIP B . P 5 HOH 29 329 73 HOH TIP B . P 5 HOH 30 330 75 HOH TIP B . P 5 HOH 31 331 76 HOH TIP B . P 5 HOH 32 332 77 HOH TIP B . P 5 HOH 33 333 79 HOH TIP B . P 5 HOH 34 334 80 HOH TIP B . P 5 HOH 35 335 87 HOH TIP B . P 5 HOH 36 336 88 HOH TIP B . P 5 HOH 37 337 89 HOH TIP B . P 5 HOH 38 338 90 HOH TIP B . P 5 HOH 39 339 93 HOH TIP B . P 5 HOH 40 340 95 HOH TIP B . P 5 HOH 41 341 97 HOH TIP B . P 5 HOH 42 342 98 HOH TIP B . P 5 HOH 43 343 100 HOH TIP B . P 5 HOH 44 344 102 HOH TIP B . P 5 HOH 45 345 103 HOH TIP B . P 5 HOH 46 346 107 HOH TIP B . P 5 HOH 47 347 108 HOH TIP B . P 5 HOH 48 348 112 HOH TIP B . P 5 HOH 49 349 113 HOH TIP B . P 5 HOH 50 350 115 HOH TIP B . P 5 HOH 51 351 116 HOH TIP B . P 5 HOH 52 352 117 HOH TIP B . P 5 HOH 53 353 118 HOH TIP B . P 5 HOH 54 354 119 HOH TIP B . P 5 HOH 55 355 120 HOH TIP B . P 5 HOH 56 356 121 HOH TIP B . P 5 HOH 57 357 123 HOH TIP B . P 5 HOH 58 358 124 HOH TIP B . P 5 HOH 59 359 125 HOH TIP B . P 5 HOH 60 360 127 HOH TIP B . P 5 HOH 61 361 130 HOH TIP B . P 5 HOH 62 362 137 HOH TIP B . P 5 HOH 63 363 138 HOH TIP B . P 5 HOH 64 364 141 HOH TIP B . P 5 HOH 65 365 146 HOH TIP B . P 5 HOH 66 366 147 HOH TIP B . P 5 HOH 67 367 148 HOH TIP B . P 5 HOH 68 368 149 HOH TIP B . P 5 HOH 69 369 151 HOH TIP B . P 5 HOH 70 370 155 HOH TIP B . P 5 HOH 71 371 158 HOH TIP B . P 5 HOH 72 372 163 HOH TIP B . P 5 HOH 73 373 165 HOH TIP B . P 5 HOH 74 374 166 HOH TIP B . P 5 HOH 75 375 168 HOH TIP B . P 5 HOH 76 376 172 HOH TIP B . P 5 HOH 77 377 174 HOH TIP B . P 5 HOH 78 378 178 HOH TIP B . P 5 HOH 79 379 179 HOH TIP B . P 5 HOH 80 380 152 HOH TIP B . Q 5 HOH 1 201 33 HOH TIP X . Q 5 HOH 2 202 57 HOH TIP X . Q 5 HOH 3 203 58 HOH TIP X . Q 5 HOH 4 204 86 HOH TIP X . Q 5 HOH 5 205 104 HOH TIP X . Q 5 HOH 6 206 129 HOH TIP X . Q 5 HOH 7 207 140 HOH TIP X . Q 5 HOH 8 208 159 HOH TIP X . R 5 HOH 1 201 38 HOH TIP Y . R 5 HOH 2 202 39 HOH TIP Y . R 5 HOH 3 203 49 HOH TIP Y . R 5 HOH 4 204 131 HOH TIP Y . R 5 HOH 5 205 157 HOH TIP Y . R 5 HOH 6 206 177 HOH TIP Y . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 D THR 4 Y THR 53 ? THR 'GLYCOSYLATION SITE' 2 C THR 4 X THR 53 ? THR 'GLYCOSYLATION SITE' # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,G,H,I,O,Q 2 1 B,D,F,J,K,L,M,N,P,R # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 470 ? 1 MORE -6 ? 1 'SSA (A^2)' 7360 ? 2 'ABSA (A^2)' 430 ? 2 MORE -5 ? 2 'SSA (A^2)' 7470 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-06-11 2 'Structure model' 1 1 2014-12-17 3 'Structure model' 1 2 2017-11-22 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2023-11-08 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Refinement description' 11 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' atom_site 3 4 'Structure model' chem_comp 4 4 'Structure model' entity 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_nonpoly_scheme 13 4 'Structure model' pdbx_struct_assembly_gen 14 4 'Structure model' struct_asym 15 4 'Structure model' struct_conn 16 4 'Structure model' struct_ref_seq_dif 17 4 'Structure model' struct_site 18 4 'Structure model' struct_site_gen 19 5 'Structure model' chem_comp 20 5 'Structure model' chem_comp_atom 21 5 'Structure model' chem_comp_bond 22 5 'Structure model' database_2 23 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_atom_site.B_iso_or_equiv' 3 4 'Structure model' '_atom_site.Cartn_x' 4 4 'Structure model' '_atom_site.Cartn_y' 5 4 'Structure model' '_atom_site.Cartn_z' 6 4 'Structure model' '_atom_site.auth_asym_id' 7 4 'Structure model' '_atom_site.auth_atom_id' 8 4 'Structure model' '_atom_site.auth_comp_id' 9 4 'Structure model' '_atom_site.auth_seq_id' 10 4 'Structure model' '_atom_site.label_asym_id' 11 4 'Structure model' '_atom_site.label_atom_id' 12 4 'Structure model' '_atom_site.label_comp_id' 13 4 'Structure model' '_atom_site.label_entity_id' 14 4 'Structure model' '_atom_site.type_symbol' 15 4 'Structure model' '_chem_comp.name' 16 4 'Structure model' '_chem_comp.type' 17 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 18 4 'Structure model' '_struct_conn.pdbx_dist_value' 19 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 20 4 'Structure model' '_struct_conn.pdbx_role' 21 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 22 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 23 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 28 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 34 4 'Structure model' '_struct_ref_seq_dif.details' 35 5 'Structure model' '_chem_comp.pdbx_synonyms' 36 5 'Structure model' '_database_2.pdbx_DOI' 37 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 MOLREP phasing . ? 2 CNS refinement . ? 3 XDS 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 89 ? ? -178.33 124.72 2 1 ASN A 95 ? ? 70.54 -2.41 3 1 TRP A 101 ? ? -176.39 149.88 4 1 SER A 121 ? ? 179.34 -179.10 5 1 PRO B 87 ? ? -61.80 64.74 6 1 ARG B 96 ? ? -143.82 37.38 7 1 GLU B 103 ? ? -37.49 138.77 8 1 ASN B 114 ? ? 39.53 58.15 9 1 SER B 121 ? ? -161.85 -164.53 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 150 ? A THR 120 2 1 Y 1 B THR 150 ? B THR 120 3 1 Y 1 Y GLY 50 ? D GLY 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A2G O5 O N N 1 A2G C1 C N S 2 A2G O1 O N N 3 A2G C2 C N R 4 A2G N2 N N N 5 A2G C3 C N R 6 A2G O3 O N N 7 A2G C4 C N R 8 A2G O4 O N N 9 A2G C5 C N R 10 A2G C6 C N N 11 A2G O6 O N N 12 A2G C7 C N N 13 A2G O7 O N N 14 A2G C8 C N N 15 A2G H1 H N N 16 A2G HO1 H N N 17 A2G H2 H N N 18 A2G HN2 H N N 19 A2G H3 H N N 20 A2G HO3 H N N 21 A2G H4 H N N 22 A2G HO4 H N N 23 A2G H5 H N N 24 A2G H61 H N N 25 A2G H81 H N N 26 A2G H82 H N N 27 A2G H83 H N N 28 A2G H62 H N N 29 A2G HO6 H N N 30 ALA N N N N 31 ALA CA C N S 32 ALA C C N N 33 ALA O O N N 34 ALA CB C N N 35 ALA OXT O N N 36 ALA H H N N 37 ALA H2 H N N 38 ALA HA H N N 39 ALA HB1 H N N 40 ALA HB2 H N N 41 ALA HB3 H N N 42 ALA HXT H N N 43 ARG N N N N 44 ARG CA C N S 45 ARG C C N N 46 ARG O O N N 47 ARG CB C N N 48 ARG CG C N N 49 ARG CD C N N 50 ARG NE N N N 51 ARG CZ C N N 52 ARG NH1 N N N 53 ARG NH2 N N N 54 ARG OXT O N N 55 ARG H H N N 56 ARG H2 H N N 57 ARG HA H N N 58 ARG HB2 H N N 59 ARG HB3 H N N 60 ARG HG2 H N N 61 ARG HG3 H N N 62 ARG HD2 H N N 63 ARG HD3 H N N 64 ARG HE H N N 65 ARG HH11 H N N 66 ARG HH12 H N N 67 ARG HH21 H N N 68 ARG HH22 H N N 69 ARG HXT H N N 70 ASN N N N N 71 ASN CA C N S 72 ASN C C N N 73 ASN O O N N 74 ASN CB C N N 75 ASN CG C N N 76 ASN OD1 O N N 77 ASN ND2 N N N 78 ASN OXT O N N 79 ASN H H N N 80 ASN H2 H N N 81 ASN HA H N N 82 ASN HB2 H N N 83 ASN HB3 H N N 84 ASN HD21 H N N 85 ASN HD22 H N N 86 ASN HXT H N N 87 ASP N N N N 88 ASP CA C N S 89 ASP C C N N 90 ASP O O N N 91 ASP CB C N N 92 ASP CG C N N 93 ASP OD1 O N N 94 ASP OD2 O N N 95 ASP OXT O N N 96 ASP H H N N 97 ASP H2 H N N 98 ASP HA H N N 99 ASP HB2 H N N 100 ASP HB3 H N N 101 ASP HD2 H N N 102 ASP HXT H N N 103 CYS N N N N 104 CYS CA C N R 105 CYS C C N N 106 CYS O O N N 107 CYS CB C N N 108 CYS SG S N N 109 CYS OXT O N N 110 CYS H H N N 111 CYS H2 H N N 112 CYS HA H N N 113 CYS HB2 H N N 114 CYS HB3 H N N 115 CYS HG H N N 116 CYS HXT H N N 117 GLN N N N N 118 GLN CA C N S 119 GLN C C N N 120 GLN O O N N 121 GLN CB C N N 122 GLN CG C N N 123 GLN CD C N N 124 GLN OE1 O N N 125 GLN NE2 N N N 126 GLN OXT O N N 127 GLN H H N N 128 GLN H2 H N N 129 GLN HA H N N 130 GLN HB2 H N N 131 GLN HB3 H N N 132 GLN HG2 H N N 133 GLN HG3 H N N 134 GLN HE21 H N N 135 GLN HE22 H N N 136 GLN HXT H N N 137 GLU N N N N 138 GLU CA C N S 139 GLU C C N N 140 GLU O O N N 141 GLU CB C N N 142 GLU CG C N N 143 GLU CD C N N 144 GLU OE1 O N N 145 GLU OE2 O N N 146 GLU OXT O N N 147 GLU H H N N 148 GLU H2 H N N 149 GLU HA H N N 150 GLU HB2 H N N 151 GLU HB3 H N N 152 GLU HG2 H N N 153 GLU HG3 H N N 154 GLU HE2 H N N 155 GLU HXT H N N 156 GLY N N N N 157 GLY CA C N N 158 GLY C C N N 159 GLY O O N N 160 GLY OXT O N N 161 GLY H H N N 162 GLY H2 H N N 163 GLY HA2 H N N 164 GLY HA3 H N N 165 GLY HXT H N N 166 HIS N N N N 167 HIS CA C N S 168 HIS C C N N 169 HIS O O N N 170 HIS CB C N N 171 HIS CG C Y N 172 HIS ND1 N Y N 173 HIS CD2 C Y N 174 HIS CE1 C Y N 175 HIS NE2 N Y N 176 HIS OXT O N N 177 HIS H H N N 178 HIS H2 H N N 179 HIS HA H N N 180 HIS HB2 H N N 181 HIS HB3 H N N 182 HIS HD1 H N N 183 HIS HD2 H N N 184 HIS HE1 H N N 185 HIS HE2 H N N 186 HIS HXT H N N 187 HOH O O N N 188 HOH H1 H N N 189 HOH H2 H N N 190 ILE N N N N 191 ILE CA C N S 192 ILE C C N N 193 ILE O O N N 194 ILE CB C N S 195 ILE CG1 C N N 196 ILE CG2 C N N 197 ILE CD1 C N N 198 ILE OXT O N N 199 ILE H H N N 200 ILE H2 H N N 201 ILE HA H N N 202 ILE HB H N N 203 ILE HG12 H N N 204 ILE HG13 H N N 205 ILE HG21 H N N 206 ILE HG22 H N N 207 ILE HG23 H N N 208 ILE HD11 H N N 209 ILE HD12 H N N 210 ILE HD13 H N N 211 ILE HXT H N N 212 LEU N N N N 213 LEU CA C N S 214 LEU C C N N 215 LEU O O N N 216 LEU CB C N N 217 LEU CG C N N 218 LEU CD1 C N N 219 LEU CD2 C N N 220 LEU OXT O N N 221 LEU H H N N 222 LEU H2 H N N 223 LEU HA H N N 224 LEU HB2 H N N 225 LEU HB3 H N N 226 LEU HG H N N 227 LEU HD11 H N N 228 LEU HD12 H N N 229 LEU HD13 H N N 230 LEU HD21 H N N 231 LEU HD22 H N N 232 LEU HD23 H N N 233 LEU HXT H N N 234 LYS N N N N 235 LYS CA C N S 236 LYS C C N N 237 LYS O O N N 238 LYS CB C N N 239 LYS CG C N N 240 LYS CD C N N 241 LYS CE C N N 242 LYS NZ N N N 243 LYS OXT O N N 244 LYS H H N N 245 LYS H2 H N N 246 LYS HA H N N 247 LYS HB2 H N N 248 LYS HB3 H N N 249 LYS HG2 H N N 250 LYS HG3 H N N 251 LYS HD2 H N N 252 LYS HD3 H N N 253 LYS HE2 H N N 254 LYS HE3 H N N 255 LYS HZ1 H N N 256 LYS HZ2 H N N 257 LYS HZ3 H N N 258 LYS HXT H N N 259 MET N N N N 260 MET CA C N S 261 MET C C N N 262 MET O O N N 263 MET CB C N N 264 MET CG C N N 265 MET SD S N N 266 MET CE C N N 267 MET OXT O N N 268 MET H H N N 269 MET H2 H N N 270 MET HA H N N 271 MET HB2 H N N 272 MET HB3 H N N 273 MET HG2 H N N 274 MET HG3 H N N 275 MET HE1 H N N 276 MET HE2 H N N 277 MET HE3 H N N 278 MET HXT H N N 279 PHE N N N N 280 PHE CA C N S 281 PHE C C N N 282 PHE O O N N 283 PHE CB C N N 284 PHE CG C Y N 285 PHE CD1 C Y N 286 PHE CD2 C Y N 287 PHE CE1 C Y N 288 PHE CE2 C Y N 289 PHE CZ C Y N 290 PHE OXT O N N 291 PHE H H N N 292 PHE H2 H N N 293 PHE HA H N N 294 PHE HB2 H N N 295 PHE HB3 H N N 296 PHE HD1 H N N 297 PHE HD2 H N N 298 PHE HE1 H N N 299 PHE HE2 H N N 300 PHE HZ H N N 301 PHE HXT H N N 302 PRO N N N N 303 PRO CA C N S 304 PRO C C N N 305 PRO O O N N 306 PRO CB C N N 307 PRO CG C N N 308 PRO CD C N N 309 PRO OXT O N N 310 PRO H H N N 311 PRO HA H N N 312 PRO HB2 H N N 313 PRO HB3 H N N 314 PRO HG2 H N N 315 PRO HG3 H N N 316 PRO HD2 H N N 317 PRO HD3 H N N 318 PRO HXT H N N 319 SER N N N N 320 SER CA C N S 321 SER C C N N 322 SER O O N N 323 SER CB C N N 324 SER OG O N N 325 SER OXT O N N 326 SER H H N N 327 SER H2 H N N 328 SER HA H N N 329 SER HB2 H N N 330 SER HB3 H N N 331 SER HG H N N 332 SER HXT H N N 333 SIA C1 C N N 334 SIA C2 C N R 335 SIA C3 C N N 336 SIA C4 C N S 337 SIA C5 C N R 338 SIA C6 C N R 339 SIA C7 C N R 340 SIA C8 C N R 341 SIA C9 C N N 342 SIA C10 C N N 343 SIA C11 C N N 344 SIA N5 N N N 345 SIA O1A O N N 346 SIA O1B O N N 347 SIA O2 O N N 348 SIA O4 O N N 349 SIA O6 O N N 350 SIA O7 O N N 351 SIA O8 O N N 352 SIA O9 O N N 353 SIA O10 O N N 354 SIA H32 H N N 355 SIA H31 H N N 356 SIA H4 H N N 357 SIA H5 H N N 358 SIA H6 H N N 359 SIA H7 H N N 360 SIA H8 H N N 361 SIA H92 H N N 362 SIA H91 H N N 363 SIA H111 H N N 364 SIA H113 H N N 365 SIA H112 H N N 366 SIA HN5 H N N 367 SIA HO1B H N N 368 SIA HO2 H N N 369 SIA HO4 H N N 370 SIA HO7 H N N 371 SIA HO8 H N N 372 SIA HO9 H N N 373 SO4 S S N N 374 SO4 O1 O N N 375 SO4 O2 O N N 376 SO4 O3 O N N 377 SO4 O4 O N N 378 THR N N N N 379 THR CA C N S 380 THR C C N N 381 THR O O N N 382 THR CB C N R 383 THR OG1 O N N 384 THR CG2 C N N 385 THR OXT O N N 386 THR H H N N 387 THR H2 H N N 388 THR HA H N N 389 THR HB H N N 390 THR HG1 H N N 391 THR HG21 H N N 392 THR HG22 H N N 393 THR HG23 H N N 394 THR HXT H N N 395 TRP N N N N 396 TRP CA C N S 397 TRP C C N N 398 TRP O O N N 399 TRP CB C N N 400 TRP CG C Y N 401 TRP CD1 C Y N 402 TRP CD2 C Y N 403 TRP NE1 N Y N 404 TRP CE2 C Y N 405 TRP CE3 C Y N 406 TRP CZ2 C Y N 407 TRP CZ3 C Y N 408 TRP CH2 C Y N 409 TRP OXT O N N 410 TRP H H N N 411 TRP H2 H N N 412 TRP HA H N N 413 TRP HB2 H N N 414 TRP HB3 H N N 415 TRP HD1 H N N 416 TRP HE1 H N N 417 TRP HE3 H N N 418 TRP HZ2 H N N 419 TRP HZ3 H N N 420 TRP HH2 H N N 421 TRP HXT H N N 422 TYR N N N N 423 TYR CA C N S 424 TYR C C N N 425 TYR O O N N 426 TYR CB C N N 427 TYR CG C Y N 428 TYR CD1 C Y N 429 TYR CD2 C Y N 430 TYR CE1 C Y N 431 TYR CE2 C Y N 432 TYR CZ C Y N 433 TYR OH O N N 434 TYR OXT O N N 435 TYR H H N N 436 TYR H2 H N N 437 TYR HA H N N 438 TYR HB2 H N N 439 TYR HB3 H N N 440 TYR HD1 H N N 441 TYR HD2 H N N 442 TYR HE1 H N N 443 TYR HE2 H N N 444 TYR HH H N N 445 TYR HXT H N N 446 VAL N N N N 447 VAL CA C N S 448 VAL C C N N 449 VAL O O N N 450 VAL CB C N N 451 VAL CG1 C N N 452 VAL CG2 C N N 453 VAL OXT O N N 454 VAL H H N N 455 VAL H2 H N N 456 VAL HA H N N 457 VAL HB H N N 458 VAL HG11 H N N 459 VAL HG12 H N N 460 VAL HG13 H N N 461 VAL HG21 H N N 462 VAL HG22 H N N 463 VAL HG23 H N N 464 VAL HXT H N N 465 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A2G O5 C5 sing N N 1 A2G C1 O5 sing N N 2 A2G C1 C2 sing N N 3 A2G C1 H1 sing N N 4 A2G O1 C1 sing N N 5 A2G O1 HO1 sing N N 6 A2G C2 C3 sing N N 7 A2G C2 H2 sing N N 8 A2G N2 C2 sing N N 9 A2G N2 HN2 sing N N 10 A2G C3 C4 sing N N 11 A2G C3 O3 sing N N 12 A2G C3 H3 sing N N 13 A2G O3 HO3 sing N N 14 A2G C4 O4 sing N N 15 A2G C4 H4 sing N N 16 A2G O4 HO4 sing N N 17 A2G C5 C4 sing N N 18 A2G C5 C6 sing N N 19 A2G C5 H5 sing N N 20 A2G C6 O6 sing N N 21 A2G C6 H61 sing N N 22 A2G C7 N2 sing N N 23 A2G O7 C7 doub N N 24 A2G C8 C7 sing N N 25 A2G C8 H81 sing N N 26 A2G C8 H82 sing N N 27 A2G C8 H83 sing N N 28 A2G C6 H62 sing N N 29 A2G O6 HO6 sing N N 30 ALA N CA sing N N 31 ALA N H sing N N 32 ALA N H2 sing N N 33 ALA CA C sing N N 34 ALA CA CB sing N N 35 ALA CA HA sing N N 36 ALA C O doub N N 37 ALA C OXT sing N N 38 ALA CB HB1 sing N N 39 ALA CB HB2 sing N N 40 ALA CB HB3 sing N N 41 ALA OXT HXT sing N N 42 ARG N CA sing N N 43 ARG N H sing N N 44 ARG N H2 sing N N 45 ARG CA C sing N N 46 ARG CA CB sing N N 47 ARG CA HA sing N N 48 ARG C O doub N N 49 ARG C OXT sing N N 50 ARG CB CG sing N N 51 ARG CB HB2 sing N N 52 ARG CB HB3 sing N N 53 ARG CG CD sing N N 54 ARG CG HG2 sing N N 55 ARG CG HG3 sing N N 56 ARG CD NE sing N N 57 ARG CD HD2 sing N N 58 ARG CD HD3 sing N N 59 ARG NE CZ sing N N 60 ARG NE HE sing N N 61 ARG CZ NH1 sing N N 62 ARG CZ NH2 doub N N 63 ARG NH1 HH11 sing N N 64 ARG NH1 HH12 sing N N 65 ARG NH2 HH21 sing N N 66 ARG NH2 HH22 sing N N 67 ARG OXT HXT sing N N 68 ASN N CA sing N N 69 ASN N H sing N N 70 ASN N H2 sing N N 71 ASN CA C sing N N 72 ASN CA CB sing N N 73 ASN CA HA sing N N 74 ASN C O doub N N 75 ASN C OXT sing N N 76 ASN CB CG sing N N 77 ASN CB HB2 sing N N 78 ASN CB HB3 sing N N 79 ASN CG OD1 doub N N 80 ASN CG ND2 sing N N 81 ASN ND2 HD21 sing N N 82 ASN ND2 HD22 sing N N 83 ASN OXT HXT sing N N 84 ASP N CA sing N N 85 ASP N H sing N N 86 ASP N H2 sing N N 87 ASP CA C sing N N 88 ASP CA CB sing N N 89 ASP CA HA sing N N 90 ASP C O doub N N 91 ASP C OXT sing N N 92 ASP CB CG sing N N 93 ASP CB HB2 sing N N 94 ASP CB HB3 sing N N 95 ASP CG OD1 doub N N 96 ASP CG OD2 sing N N 97 ASP OD2 HD2 sing N N 98 ASP OXT HXT sing N N 99 CYS N CA sing N N 100 CYS N H sing N N 101 CYS N H2 sing N N 102 CYS CA C sing N N 103 CYS CA CB sing N N 104 CYS CA HA sing N N 105 CYS C O doub N N 106 CYS C OXT sing N N 107 CYS CB SG sing N N 108 CYS CB HB2 sing N N 109 CYS CB HB3 sing N N 110 CYS SG HG sing N N 111 CYS OXT HXT sing N N 112 GLN N CA sing N N 113 GLN N H sing N N 114 GLN N H2 sing N N 115 GLN CA C sing N N 116 GLN CA CB sing N N 117 GLN CA HA sing N N 118 GLN C O doub N N 119 GLN C OXT sing N N 120 GLN CB CG sing N N 121 GLN CB HB2 sing N N 122 GLN CB HB3 sing N N 123 GLN CG CD sing N N 124 GLN CG HG2 sing N N 125 GLN CG HG3 sing N N 126 GLN CD OE1 doub N N 127 GLN CD NE2 sing N N 128 GLN NE2 HE21 sing N N 129 GLN NE2 HE22 sing N N 130 GLN OXT HXT sing N N 131 GLU N CA sing N N 132 GLU N H sing N N 133 GLU N H2 sing N N 134 GLU CA C sing N N 135 GLU CA CB sing N N 136 GLU CA HA sing N N 137 GLU C O doub N N 138 GLU C OXT sing N N 139 GLU CB CG sing N N 140 GLU CB HB2 sing N N 141 GLU CB HB3 sing N N 142 GLU CG CD sing N N 143 GLU CG HG2 sing N N 144 GLU CG HG3 sing N N 145 GLU CD OE1 doub N N 146 GLU CD OE2 sing N N 147 GLU OE2 HE2 sing N N 148 GLU OXT HXT sing N N 149 GLY N CA sing N N 150 GLY N H sing N N 151 GLY N H2 sing N N 152 GLY CA C sing N N 153 GLY CA HA2 sing N N 154 GLY CA HA3 sing N N 155 GLY C O doub N N 156 GLY C OXT sing N N 157 GLY OXT HXT sing N N 158 HIS N CA sing N N 159 HIS N H sing N N 160 HIS N H2 sing N N 161 HIS CA C sing N N 162 HIS CA CB sing N N 163 HIS CA HA sing N N 164 HIS C O doub N N 165 HIS C OXT sing N N 166 HIS CB CG sing N N 167 HIS CB HB2 sing N N 168 HIS CB HB3 sing N N 169 HIS CG ND1 sing Y N 170 HIS CG CD2 doub Y N 171 HIS ND1 CE1 doub Y N 172 HIS ND1 HD1 sing N N 173 HIS CD2 NE2 sing Y N 174 HIS CD2 HD2 sing N N 175 HIS CE1 NE2 sing Y N 176 HIS CE1 HE1 sing N N 177 HIS NE2 HE2 sing N N 178 HIS OXT HXT sing N N 179 HOH O H1 sing N N 180 HOH O H2 sing N N 181 ILE N CA sing N N 182 ILE N H sing N N 183 ILE N H2 sing N N 184 ILE CA C sing N N 185 ILE CA CB sing N N 186 ILE CA HA sing N N 187 ILE C O doub N N 188 ILE C OXT sing N N 189 ILE CB CG1 sing N N 190 ILE CB CG2 sing N N 191 ILE CB HB sing N N 192 ILE CG1 CD1 sing N N 193 ILE CG1 HG12 sing N N 194 ILE CG1 HG13 sing N N 195 ILE CG2 HG21 sing N N 196 ILE CG2 HG22 sing N N 197 ILE CG2 HG23 sing N N 198 ILE CD1 HD11 sing N N 199 ILE CD1 HD12 sing N N 200 ILE CD1 HD13 sing N N 201 ILE OXT HXT sing N N 202 LEU N CA sing N N 203 LEU N H sing N N 204 LEU N H2 sing N N 205 LEU CA C sing N N 206 LEU CA CB sing N N 207 LEU CA HA sing N N 208 LEU C O doub N N 209 LEU C OXT sing N N 210 LEU CB CG sing N N 211 LEU CB HB2 sing N N 212 LEU CB HB3 sing N N 213 LEU CG CD1 sing N N 214 LEU CG CD2 sing N N 215 LEU CG HG sing N N 216 LEU CD1 HD11 sing N N 217 LEU CD1 HD12 sing N N 218 LEU CD1 HD13 sing N N 219 LEU CD2 HD21 sing N N 220 LEU CD2 HD22 sing N N 221 LEU CD2 HD23 sing N N 222 LEU OXT HXT sing N N 223 LYS N CA sing N N 224 LYS N H sing N N 225 LYS N H2 sing N N 226 LYS CA C sing N N 227 LYS CA CB sing N N 228 LYS CA HA sing N N 229 LYS C O doub N N 230 LYS C OXT sing N N 231 LYS CB CG sing N N 232 LYS CB HB2 sing N N 233 LYS CB HB3 sing N N 234 LYS CG CD sing N N 235 LYS CG HG2 sing N N 236 LYS CG HG3 sing N N 237 LYS CD CE sing N N 238 LYS CD HD2 sing N N 239 LYS CD HD3 sing N N 240 LYS CE NZ sing N N 241 LYS CE HE2 sing N N 242 LYS CE HE3 sing N N 243 LYS NZ HZ1 sing N N 244 LYS NZ HZ2 sing N N 245 LYS NZ HZ3 sing N N 246 LYS OXT HXT sing N N 247 MET N CA sing N N 248 MET N H sing N N 249 MET N H2 sing N N 250 MET CA C sing N N 251 MET CA CB sing N N 252 MET CA HA sing N N 253 MET C O doub N N 254 MET C OXT sing N N 255 MET CB CG sing N N 256 MET CB HB2 sing N N 257 MET CB HB3 sing N N 258 MET CG SD sing N N 259 MET CG HG2 sing N N 260 MET CG HG3 sing N N 261 MET SD CE sing N N 262 MET CE HE1 sing N N 263 MET CE HE2 sing N N 264 MET CE HE3 sing N N 265 MET OXT HXT sing N N 266 PHE N CA sing N N 267 PHE N H sing N N 268 PHE N H2 sing N N 269 PHE CA C sing N N 270 PHE CA CB sing N N 271 PHE CA HA sing N N 272 PHE C O doub N N 273 PHE C OXT sing N N 274 PHE CB CG sing N N 275 PHE CB HB2 sing N N 276 PHE CB HB3 sing N N 277 PHE CG CD1 doub Y N 278 PHE CG CD2 sing Y N 279 PHE CD1 CE1 sing Y N 280 PHE CD1 HD1 sing N N 281 PHE CD2 CE2 doub Y N 282 PHE CD2 HD2 sing N N 283 PHE CE1 CZ doub Y N 284 PHE CE1 HE1 sing N N 285 PHE CE2 CZ sing Y N 286 PHE CE2 HE2 sing N N 287 PHE CZ HZ sing N N 288 PHE OXT HXT sing N N 289 PRO N CA sing N N 290 PRO N CD sing N N 291 PRO N H sing N N 292 PRO CA C sing N N 293 PRO CA CB sing N N 294 PRO CA HA sing N N 295 PRO C O doub N N 296 PRO C OXT sing N N 297 PRO CB CG sing N N 298 PRO CB HB2 sing N N 299 PRO CB HB3 sing N N 300 PRO CG CD sing N N 301 PRO CG HG2 sing N N 302 PRO CG HG3 sing N N 303 PRO CD HD2 sing N N 304 PRO CD HD3 sing N N 305 PRO OXT HXT sing N N 306 SER N CA sing N N 307 SER N H sing N N 308 SER N H2 sing N N 309 SER CA C sing N N 310 SER CA CB sing N N 311 SER CA HA sing N N 312 SER C O doub N N 313 SER C OXT sing N N 314 SER CB OG sing N N 315 SER CB HB2 sing N N 316 SER CB HB3 sing N N 317 SER OG HG sing N N 318 SER OXT HXT sing N N 319 SIA C1 C2 sing N N 320 SIA C1 O1A doub N N 321 SIA C1 O1B sing N N 322 SIA C2 C3 sing N N 323 SIA C2 O2 sing N N 324 SIA C2 O6 sing N N 325 SIA C3 C4 sing N N 326 SIA C3 H32 sing N N 327 SIA C3 H31 sing N N 328 SIA C4 C5 sing N N 329 SIA C4 O4 sing N N 330 SIA C4 H4 sing N N 331 SIA C5 C6 sing N N 332 SIA C5 N5 sing N N 333 SIA C5 H5 sing N N 334 SIA C6 C7 sing N N 335 SIA C6 O6 sing N N 336 SIA C6 H6 sing N N 337 SIA C7 C8 sing N N 338 SIA C7 O7 sing N N 339 SIA C7 H7 sing N N 340 SIA C8 C9 sing N N 341 SIA C8 O8 sing N N 342 SIA C8 H8 sing N N 343 SIA C9 O9 sing N N 344 SIA C9 H92 sing N N 345 SIA C9 H91 sing N N 346 SIA C10 C11 sing N N 347 SIA C10 N5 sing N N 348 SIA C10 O10 doub N N 349 SIA C11 H111 sing N N 350 SIA C11 H113 sing N N 351 SIA C11 H112 sing N N 352 SIA N5 HN5 sing N N 353 SIA O1B HO1B sing N N 354 SIA O2 HO2 sing N N 355 SIA O4 HO4 sing N N 356 SIA O7 HO7 sing N N 357 SIA O8 HO8 sing N N 358 SIA O9 HO9 sing N N 359 SO4 S O1 doub N N 360 SO4 S O2 doub N N 361 SO4 S O3 sing N N 362 SO4 S O4 sing N N 363 THR N CA sing N N 364 THR N H sing N N 365 THR N H2 sing N N 366 THR CA C sing N N 367 THR CA CB sing N N 368 THR CA HA sing N N 369 THR C O doub N N 370 THR C OXT sing N N 371 THR CB OG1 sing N N 372 THR CB CG2 sing N N 373 THR CB HB sing N N 374 THR OG1 HG1 sing N N 375 THR CG2 HG21 sing N N 376 THR CG2 HG22 sing N N 377 THR CG2 HG23 sing N N 378 THR OXT HXT sing N N 379 TRP N CA sing N N 380 TRP N H sing N N 381 TRP N H2 sing N N 382 TRP CA C sing N N 383 TRP CA CB sing N N 384 TRP CA HA sing N N 385 TRP C O doub N N 386 TRP C OXT sing N N 387 TRP CB CG sing N N 388 TRP CB HB2 sing N N 389 TRP CB HB3 sing N N 390 TRP CG CD1 doub Y N 391 TRP CG CD2 sing Y N 392 TRP CD1 NE1 sing Y N 393 TRP CD1 HD1 sing N N 394 TRP CD2 CE2 doub Y N 395 TRP CD2 CE3 sing Y N 396 TRP NE1 CE2 sing Y N 397 TRP NE1 HE1 sing N N 398 TRP CE2 CZ2 sing Y N 399 TRP CE3 CZ3 doub Y N 400 TRP CE3 HE3 sing N N 401 TRP CZ2 CH2 doub Y N 402 TRP CZ2 HZ2 sing N N 403 TRP CZ3 CH2 sing Y N 404 TRP CZ3 HZ3 sing N N 405 TRP CH2 HH2 sing N N 406 TRP OXT HXT sing N N 407 TYR N CA sing N N 408 TYR N H sing N N 409 TYR N H2 sing N N 410 TYR CA C sing N N 411 TYR CA CB sing N N 412 TYR CA HA sing N N 413 TYR C O doub N N 414 TYR C OXT sing N N 415 TYR CB CG sing N N 416 TYR CB HB2 sing N N 417 TYR CB HB3 sing N N 418 TYR CG CD1 doub Y N 419 TYR CG CD2 sing Y N 420 TYR CD1 CE1 sing Y N 421 TYR CD1 HD1 sing N N 422 TYR CD2 CE2 doub Y N 423 TYR CD2 HD2 sing N N 424 TYR CE1 CZ doub Y N 425 TYR CE1 HE1 sing N N 426 TYR CE2 CZ sing Y N 427 TYR CE2 HE2 sing N N 428 TYR CZ OH sing N N 429 TYR OH HH sing N N 430 TYR OXT HXT sing N N 431 VAL N CA sing N N 432 VAL N H sing N N 433 VAL N H2 sing N N 434 VAL CA C sing N N 435 VAL CA CB sing N N 436 VAL CA HA sing N N 437 VAL C O doub N N 438 VAL C OXT sing N N 439 VAL CB CG1 sing N N 440 VAL CB CG2 sing N N 441 VAL CB HB sing N N 442 VAL CG1 HG11 sing N N 443 VAL CG1 HG12 sing N N 444 VAL CG1 HG13 sing N N 445 VAL CG2 HG21 sing N N 446 VAL CG2 HG22 sing N N 447 VAL CG2 HG23 sing N N 448 VAL OXT HXT sing N N 449 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero E 3 A2G 1 C A2G 1 X NGA 220 n E 3 SIA 2 C SIA 2 X SIA 210 n F 3 A2G 1 D A2G 1 Y NGA 220 n F 3 SIA 2 D SIA 2 Y SIA 210 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A2G 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpNAca A2G 'COMMON NAME' GMML 1.0 N-acetyl-a-D-galactopyranosamine A2G 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GalpNAc A2G 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalNAc SIA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DNeup5Aca SIA 'COMMON NAME' GMML 1.0 'N-acetyl-a-D-neuraminic acid' SIA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Neup5Ac SIA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Neu5Ac # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DNeup5Aca2-6DGalpNAca1- 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/2,2,1/[a2112h-1a_1-5_2*NCC/3=O][Aad21122h-2a_2-6_5*NCC/3=O]/1-2/a6-b2' WURCS PDB2Glycan 1.1.0 3 3 '[]{[(3+1)][a-D-GalpNAc]{[(6+2)][a-D-Neup5Ac]{}}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 SIA _pdbx_entity_branch_link.atom_id_1 C2 _pdbx_entity_branch_link.leaving_atom_id_1 O2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 A2G _pdbx_entity_branch_link.atom_id_2 O6 _pdbx_entity_branch_link.leaving_atom_id_2 HO6 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 A2G 1 n 3 SIA 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'SULFATE ION' SO4 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3WUZ _pdbx_initial_refinement_model.details 'PDB ENTRY 3WUZ' #