HEADER HYDROLASE 16-MAY-14 3WVC TITLE GUANYLYLPYRIDINOL (GP)-BOUND HCGF FROM METHANOCALDOCOCCUS JANNASCHII COMPND MOL_ID: 1; COMPND 2 MOLECULE: UPF0254 PROTEIN MJ1251; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.2.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII; SOURCE 3 ORGANISM_TAXID: 243232; SOURCE 4 STRAIN: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440; SOURCE 5 GENE: MJ1251; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)STAR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS THIOESTERASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.FUJISHIRO,U.ERMLER,S.SHIMA REVDAT 2 08-NOV-23 3WVC 1 REMARK SEQADV REVDAT 1 29-APR-15 3WVC 0 JRNL AUTH T.FUJISHIRO,J.KAHNT,U.ERMLER,S.SHIMA JRNL TITL PROTEIN-PYRIDINOL THIOESTER PRECURSOR FOR BIOSYNTHESIS OF JRNL TITL 2 THE ORGANOMETALLIC ACYL-IRON LIGAND IN [FE]-HYDROGENASE JRNL TITL 3 COFACTOR JRNL REF NAT COMMUN V. 6 6895 2015 JRNL REFN ESSN 2041-1723 JRNL PMID 25882909 JRNL DOI 10.1038/NCOMMS7895 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0071 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 21248 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1118 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1583 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.1640 REMARK 3 BIN FREE R VALUE SET COUNT : 83 REMARK 3 BIN FREE R VALUE : 0.2100 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2700 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 104 REMARK 3 SOLVENT ATOMS : 219 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.24000 REMARK 3 B22 (A**2) : -0.09000 REMARK 3 B33 (A**2) : -0.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.05000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.193 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.177 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.115 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.130 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2879 ; 0.020 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3891 ; 1.976 ; 2.011 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 346 ; 6.807 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 121 ;36.684 ;24.876 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 542 ;16.055 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;15.808 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 437 ; 0.151 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2080 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1360 ; 1.582 ; 1.538 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1699 ; 2.332 ; 2.293 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1519 ; 2.831 ; 2.098 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A -1 167 B -1 167 207 0.13 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 9 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -1 A 13 REMARK 3 RESIDUE RANGE : A 14 A 36 REMARK 3 RESIDUE RANGE : A 37 A 53 REMARK 3 RESIDUE RANGE : A 54 A 72 REMARK 3 RESIDUE RANGE : A 73 A 82 REMARK 3 RESIDUE RANGE : A 83 A 101 REMARK 3 RESIDUE RANGE : A 102 A 129 REMARK 3 RESIDUE RANGE : A 130 A 142 REMARK 3 RESIDUE RANGE : A 143 A 167 REMARK 3 ORIGIN FOR THE GROUP (A): 5.4117 0.3897 19.5024 REMARK 3 T TENSOR REMARK 3 T11: 0.0086 T22: 0.0244 REMARK 3 T33: 0.0115 T12: 0.0106 REMARK 3 T13: 0.0050 T23: -0.0008 REMARK 3 L TENSOR REMARK 3 L11: 0.2720 L22: 0.5346 REMARK 3 L33: 0.7721 L12: 0.0942 REMARK 3 L13: -0.3286 L23: 0.3152 REMARK 3 S TENSOR REMARK 3 S11: -0.0074 S12: 0.0279 S13: -0.0026 REMARK 3 S21: 0.0002 S22: -0.0167 S23: 0.0201 REMARK 3 S31: 0.0199 S32: -0.0436 S33: 0.0241 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 9 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -1 B 13 REMARK 3 RESIDUE RANGE : B 14 B 36 REMARK 3 RESIDUE RANGE : B 37 B 53 REMARK 3 RESIDUE RANGE : B 54 B 64 REMARK 3 RESIDUE RANGE : B 65 B 82 REMARK 3 RESIDUE RANGE : B 83 B 101 REMARK 3 RESIDUE RANGE : B 102 B 129 REMARK 3 RESIDUE RANGE : B 130 B 142 REMARK 3 RESIDUE RANGE : B 143 B 167 REMARK 3 ORIGIN FOR THE GROUP (A): 7.6711 22.7191 18.1504 REMARK 3 T TENSOR REMARK 3 T11: 0.0083 T22: 0.0096 REMARK 3 T33: 0.0244 T12: -0.0044 REMARK 3 T13: 0.0090 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 0.0626 L22: 1.1234 REMARK 3 L33: 0.7319 L12: -0.2092 REMARK 3 L13: -0.1364 L23: 0.0288 REMARK 3 S TENSOR REMARK 3 S11: 0.0113 S12: 0.0018 S13: -0.0118 REMARK 3 S21: -0.0430 S22: -0.0215 S23: 0.0644 REMARK 3 S31: -0.0117 S32: 0.0063 S33: 0.0103 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 3WVC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000096838. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.980 REMARK 200 MONOCHROMATOR : A SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE, XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22368 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.3500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.12400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 11.13 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: SEMET-LABELLED HCGF FROM METHANOCALDOCOCCUS REMARK 200 JANNASCHII PDB ENTRY 3WVA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40%(V/V)MPD, 200MM LITHIUM SULFATE, PH REMARK 280 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.76500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -96.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 GLY B -2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB CYS A 9 SAK ZGP A 203 1.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 1 CG - SD - CE ANGL. DEV. = 11.8 DEGREES REMARK 500 LEU A 128 CA - CB - CG ANGL. DEV. = 15.0 DEGREES REMARK 500 ARG B 157 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG B 157 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 9 -81.18 -114.83 REMARK 500 ALA A 78 62.21 -179.75 REMARK 500 CYS B 9 -86.48 -112.07 REMARK 500 CYS B 9 -87.55 -112.03 REMARK 500 ALA B 13 9.89 58.62 REMARK 500 LYS B 76 -61.60 60.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZGP A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FEG B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 205 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WV7 RELATED DB: PDB REMARK 900 RELATED ID: 3WV8 RELATED DB: PDB REMARK 900 RELATED ID: 3WV9 RELATED DB: PDB REMARK 900 RELATED ID: 3WVA RELATED DB: PDB REMARK 900 RELATED ID: 3WVB RELATED DB: PDB DBREF 3WVC A 1 167 UNP Q58649 Y1251_METJA 1 167 DBREF 3WVC B 1 167 UNP Q58649 Y1251_METJA 1 167 SEQADV 3WVC GLY A -2 UNP Q58649 EXPRESSION TAG SEQADV 3WVC SER A -1 UNP Q58649 EXPRESSION TAG SEQADV 3WVC HIS A 0 UNP Q58649 EXPRESSION TAG SEQADV 3WVC GLY B -2 UNP Q58649 EXPRESSION TAG SEQADV 3WVC SER B -1 UNP Q58649 EXPRESSION TAG SEQADV 3WVC HIS B 0 UNP Q58649 EXPRESSION TAG SEQRES 1 A 170 GLY SER HIS MET ILE THR VAL ALA THR ALA GLU CYS PHE SEQRES 2 A 170 THR HIS ALA ASN ILE GLY LEU THR ILE HIS LYS ALA ALA SEQRES 3 A 170 ALA GLY TYR GLU ASP PHE GLU PHE LYS TYR LEU PHE SER SEQRES 4 A 170 GLU GLU ASP LEU LYS LEU MET LYS ASN VAL ARG VAL ILE SEQRES 5 A 170 SER ALA MET PHE VAL PRO SER ILE ILE GLY VAL GLU LYS SEQRES 6 A 170 LEU LEU ASP ILE LYS LEU PRO GLU PRO ASP PHE ASN TYR SEQRES 7 A 170 LYS TYR ALA LYS ALA TYR SER GLU GLU LYS ASP LEU GLU SEQRES 8 A 170 VAL ALA LYS LEU MET ALA GLU GLY LEU LYS LYS LYS LEU SEQRES 9 A 170 ASN VAL ASN ILE SER ILE GLY SER THR ALA GLY VAL GLY SEQRES 10 A 170 ARG GLY ALA ILE CYS ILE LEU THR ASP ASN ASN ARG TYR SEQRES 11 A 170 LEU PHE THR SER ASP VAL TYR ALA ASN LEU ILE THR PHE SEQRES 12 A 170 GLU ASN ILE LYS GLU ARG GLN LYS ASN GLY ILE GLU LYS SEQRES 13 A 170 GLY ILE LYS ARG PHE LEU GLU ILE LEU LYS LYS GLU TYR SEQRES 14 A 170 PHE SEQRES 1 B 170 GLY SER HIS MET ILE THR VAL ALA THR ALA GLU CYS PHE SEQRES 2 B 170 THR HIS ALA ASN ILE GLY LEU THR ILE HIS LYS ALA ALA SEQRES 3 B 170 ALA GLY TYR GLU ASP PHE GLU PHE LYS TYR LEU PHE SER SEQRES 4 B 170 GLU GLU ASP LEU LYS LEU MET LYS ASN VAL ARG VAL ILE SEQRES 5 B 170 SER ALA MET PHE VAL PRO SER ILE ILE GLY VAL GLU LYS SEQRES 6 B 170 LEU LEU ASP ILE LYS LEU PRO GLU PRO ASP PHE ASN TYR SEQRES 7 B 170 LYS TYR ALA LYS ALA TYR SER GLU GLU LYS ASP LEU GLU SEQRES 8 B 170 VAL ALA LYS LEU MET ALA GLU GLY LEU LYS LYS LYS LEU SEQRES 9 B 170 ASN VAL ASN ILE SER ILE GLY SER THR ALA GLY VAL GLY SEQRES 10 B 170 ARG GLY ALA ILE CYS ILE LEU THR ASP ASN ASN ARG TYR SEQRES 11 B 170 LEU PHE THR SER ASP VAL TYR ALA ASN LEU ILE THR PHE SEQRES 12 B 170 GLU ASN ILE LYS GLU ARG GLN LYS ASN GLY ILE GLU LYS SEQRES 13 B 170 GLY ILE LYS ARG PHE LEU GLU ILE LEU LYS LYS GLU TYR SEQRES 14 B 170 PHE HET SO4 A 201 5 HET SO4 A 202 5 HET ZGP A 203 37 HET FEG B 201 37 HET SO4 B 202 5 HET SO4 B 203 5 HET SO4 B 204 5 HET SO4 B 205 5 HETNAM SO4 SULFATE ION HETNAM ZGP 5'-O-[(R)-HYDROXY{[2-HYDROXY-3,5-DIMETHYL-6-(2-OXO-2- HETNAM 2 ZGP SULFANYLETHYL)PYRIDIN-4-YL]OXY}PHOSPHORYL]GUANOSINE HETNAM FEG 5'-O-[(S)-{[2-(CARBOXYMETHYL)-6-HYDROXY-3,5- HETNAM 2 FEG DIMETHYLPYRIDIN-4-YL]OXY}(HYDROXY)PHOSPHORYL]GUANOSINE FORMUL 3 SO4 6(O4 S 2-) FORMUL 5 ZGP C19 H23 N6 O10 P S FORMUL 6 FEG C19 H23 N6 O11 P FORMUL 11 HOH *219(H2 O) HELIX 1 1 ALA A 13 GLY A 25 1 13 HELIX 2 2 PHE A 31 PHE A 35 5 5 HELIX 3 3 SER A 36 LYS A 44 1 9 HELIX 4 4 SER A 56 ASP A 65 1 10 HELIX 5 5 SER A 82 ASN A 102 1 21 HELIX 6 6 ASN A 142 PHE A 167 1 26 HELIX 7 7 ALA B 13 ALA B 24 1 12 HELIX 8 8 PHE B 31 PHE B 35 5 5 HELIX 9 9 SER B 36 MET B 43 1 8 HELIX 10 10 SER B 56 ASP B 65 1 10 HELIX 11 11 SER B 82 ASN B 102 1 21 HELIX 12 12 ASN B 142 PHE B 167 1 26 SHEET 1 A10 ARG A 126 PHE A 129 0 SHEET 2 A10 ALA A 117 LEU A 121 -1 N ILE A 120 O TYR A 127 SHEET 3 A10 ILE A 105 THR A 110 -1 N SER A 106 O LEU A 121 SHEET 4 A10 ILE A 2 GLU A 8 1 N ALA A 7 O ILE A 107 SHEET 5 A10 VAL A 46 PHE A 53 1 O ILE A 49 N VAL A 4 SHEET 6 A10 VAL B 46 PHE B 53 -1 O PHE B 53 N ALA A 51 SHEET 7 A10 ILE B 2 GLU B 8 1 N VAL B 4 O ILE B 49 SHEET 8 A10 ILE B 105 THR B 110 1 O ILE B 107 N ALA B 7 SHEET 9 A10 ALA B 117 LEU B 121 -1 O LEU B 121 N SER B 106 SHEET 10 A10 ARG B 126 PHE B 129 -1 O PHE B 129 N ILE B 118 SHEET 1 B 2 PHE A 73 TYR A 75 0 SHEET 2 B 2 ALA A 78 ALA A 80 -1 O ALA A 80 N PHE A 73 SHEET 1 C 2 VAL A 113 GLY A 114 0 SHEET 2 C 2 ALA A 135 ASN A 136 -1 O ALA A 135 N GLY A 114 SHEET 1 D 2 PHE B 73 ASN B 74 0 SHEET 2 D 2 LYS B 79 ALA B 80 -1 O ALA B 80 N PHE B 73 SHEET 1 E 2 VAL B 113 GLY B 114 0 SHEET 2 E 2 ALA B 135 ASN B 136 -1 O ALA B 135 N GLY B 114 SITE 1 AC1 6 SER A 56 ILE A 57 ILE A 58 LYS A 79 SITE 2 AC1 6 HOH A 364 ARG B 47 SITE 1 AC2 5 LYS A 153 LYS A 156 ARG A 157 HOH A 324 SITE 2 AC2 5 HOH A 370 SITE 1 AC3 16 CYS A 9 PHE A 10 HIS A 12 THR A 110 SITE 2 AC3 16 ALA A 111 LEU A 137 PHE A 140 ILE A 143 SITE 3 AC3 16 ARG A 146 HOH A 306 HOH A 371 HIS B 20 SITE 4 AC3 16 ALA B 24 GLY B 25 TYR B 26 GLU B 27 SITE 1 AC4 17 HIS A 20 ALA A 24 GLY A 25 TYR A 26 SITE 2 AC4 17 GLU A 27 CYS B 9 PHE B 10 HIS B 12 SITE 3 AC4 17 THR B 110 ALA B 111 LEU B 137 PHE B 140 SITE 4 AC4 17 ILE B 143 ARG B 146 HOH B 301 HOH B 365 SITE 5 AC4 17 HOH B 371 SITE 1 AC5 7 ARG A 47 SER B 56 ILE B 57 ILE B 58 SITE 2 AC5 7 LYS B 79 HOH B 333 HOH B 364 SITE 1 AC6 6 PHE B 129 LYS B 153 ARG B 157 HOH B 302 SITE 2 AC6 6 HOH B 331 HOH B 341 SITE 1 AC7 2 LYS B 91 ARG B 126 SITE 1 AC8 5 HIS B 0 MET B 1 ARG B 47 LYS B 76 SITE 2 AC8 5 HOH B 345 CRYST1 39.570 97.530 47.120 90.00 111.17 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025272 0.000000 0.009787 0.00000 SCALE2 0.000000 0.010253 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022758 0.00000