HEADER HYDROLASE/HYDROLASE INHIBITOR 29-JUL-14 3WXC TITLE CRYSTAL STRUCTURE OF IMP-1 METALLO-BETA-LACTAMASE COMPLEXED WITH A 3- TITLE 2 AMINOPHTALIC ACID INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BETA-LACTAMASE IMP-1, BLA-IMP PROTEIN, EXTENDED-SPECTRUM B- COMPND 5 LACTAMASE, IMP-1 CLASS B BETA-LACTAMASE, IMP-1 CLASS B METALLO-BETA- COMPND 6 LACTAMASE, IMP-1 METALLO-BETA-LACTMASE, METALLO BETA LACTAMASE, COMPND 7 METALLO-BETA-LACTAMASE, METALLO-BETA-LACTAMASE IMP-1; COMPND 8 EC: 3.5.2.6; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: BLAIMP-1, BLA IMP, BLA-IMP, BLAESP, IMP; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS LACTAMASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.SAITO,T.WATANABE,M.YAMADA REVDAT 3 03-APR-24 3WXC 1 REMARK REVDAT 2 20-MAR-24 3WXC 1 REMARK LINK REVDAT 1 15-OCT-14 3WXC 0 JRNL AUTH Y.HIRAIWA,J.SAITO,T.WATANABE,M.YAMADA,A.MORINAKA, JRNL AUTH 2 T.FUKUSHIMA,T.KUDO JRNL TITL X-RAY CRYSTALLOGRAPHIC ANALYSIS OF IMP-1 JRNL TITL 2 METALLO-BETA-LACTAMASE COMPLEXED WITH A 3-AMINOPHTHALIC ACID JRNL TITL 3 DERIVATIVE, STRUCTURE-BASED DRUG DESIGN, AND SYNTHESIS OF JRNL TITL 4 3,6-DISUBSTITUTED PHTHALIC ACID DERIVATIVE INHIBITORS JRNL REF BIOORG.MED.CHEM.LETT. V. 24 4891 2014 JRNL REFN ISSN 0960-894X JRNL PMID 25246278 JRNL DOI 10.1016/J.BMCL.2014.08.039 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 29866 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1511 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2150 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.3490 REMARK 3 BIN FREE R VALUE SET COUNT : 107 REMARK 3 BIN FREE R VALUE : 0.3820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3388 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 51 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.08000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : -2.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.233 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.198 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.166 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.484 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3516 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4776 ; 1.138 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 431 ; 5.773 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 138 ;36.790 ;25.072 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 597 ;14.318 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;15.677 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 529 ; 0.072 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2612 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2145 ; 0.484 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3466 ; 0.926 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1371 ; 1.240 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1310 ; 2.158 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3WXC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000096910. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-OCT-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31542 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 19.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.550 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.17 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.01 REMARK 200 R MERGE FOR SHELL (I) : 0.39400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: UNPUBLISHED DATA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG MME 2000, 0.2M AMMONIUM REMARK 280 SULFATE, 2MM DITHIOTHREITOL, 0.1M SODIUM ACETATE, PH 4.8, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.99700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 99.19200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.39750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 99.19200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.99700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 26.39750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 GLU A 2 REMARK 465 SER A 3 REMARK 465 LYS A 221 REMARK 465 LYS A 222 REMARK 465 ALA B 1 REMARK 465 GLU B 2 REMARK 465 SER B 3 REMARK 465 SER B 220 REMARK 465 LYS B 221 REMARK 465 LYS B 222 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 28 -15.07 -140.04 REMARK 500 ASN A 41 -111.37 59.76 REMARK 500 ASP A 48 137.51 69.26 REMARK 500 ASN A 128 11.31 59.66 REMARK 500 ASN B 41 -125.50 61.99 REMARK 500 ASP B 48 139.21 68.24 REMARK 500 PRO B 50 172.52 -56.09 REMARK 500 ASN B 128 -9.26 73.56 REMARK 500 ASP B 202 -167.28 -101.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 77 NE2 REMARK 620 2 HIS A 79 ND1 101.4 REMARK 620 3 HIS A 139 NE2 99.0 111.1 REMARK 620 4 C93 A 303 O8 117.8 115.9 110.4 REMARK 620 5 C93 A 303 O9 171.7 81.4 87.2 54.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 81 OD2 REMARK 620 2 CYS A 158 SG 114.1 REMARK 620 3 HIS A 197 NE2 88.6 112.1 REMARK 620 4 C93 A 303 O8 101.0 114.6 122.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 77 NE2 REMARK 620 2 HIS B 79 ND1 98.2 REMARK 620 3 HIS B 139 NE2 111.0 112.5 REMARK 620 4 C93 B 303 O8 119.8 115.4 100.6 REMARK 620 5 C93 B 303 O9 168.9 79.5 79.8 53.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 81 OD2 REMARK 620 2 CYS B 158 SG 111.0 REMARK 620 3 HIS B 197 NE2 97.1 112.2 REMARK 620 4 C93 B 303 O8 101.6 114.2 118.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C93 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C93 B 303 DBREF 3WXC A 1 222 UNP Q79MP6 Q79MP6_PSEAI 19 240 DBREF 3WXC B 1 222 UNP Q79MP6 Q79MP6_PSEAI 19 240 SEQRES 1 A 222 ALA GLU SER LEU PRO ASP LEU LYS ILE GLU LYS LEU ASP SEQRES 2 A 222 GLU GLY VAL TYR VAL HIS THR SER PHE GLU GLU VAL ASN SEQRES 3 A 222 GLY TRP GLY VAL VAL PRO LYS HIS GLY LEU VAL VAL LEU SEQRES 4 A 222 VAL ASN ALA GLU ALA TYR LEU ILE ASP THR PRO PHE THR SEQRES 5 A 222 ALA LYS ASP THR GLU LYS LEU VAL THR TRP PHE VAL GLU SEQRES 6 A 222 ARG GLY TYR LYS ILE LYS GLY SER ILE SER SER HIS PHE SEQRES 7 A 222 HIS SER ASP SER THR GLY GLY ILE GLU TRP LEU ASN SER SEQRES 8 A 222 ARG SER ILE PRO THR TYR ALA SER GLU LEU THR ASN GLU SEQRES 9 A 222 LEU LEU LYS LYS ASP GLY LYS VAL GLN ALA THR ASN SER SEQRES 10 A 222 PHE SER GLY VAL ASN TYR TRP LEU VAL LYS ASN LYS ILE SEQRES 11 A 222 GLU VAL PHE TYR PRO GLY PRO GLY HIS THR PRO ASP ASN SEQRES 12 A 222 VAL VAL VAL TRP LEU PRO GLU ARG LYS ILE LEU PHE GLY SEQRES 13 A 222 GLY CYS PHE ILE LYS PRO TYR GLY LEU GLY ASN LEU GLY SEQRES 14 A 222 ASP ALA ASN ILE GLU ALA TRP PRO LYS SER ALA LYS LEU SEQRES 15 A 222 LEU LYS SER LYS TYR GLY LYS ALA LYS LEU VAL VAL PRO SEQRES 16 A 222 SER HIS SER GLU VAL GLY ASP ALA SER LEU LEU LYS LEU SEQRES 17 A 222 THR LEU GLU GLN ALA VAL LYS GLY LEU ASN GLU SER LYS SEQRES 18 A 222 LYS SEQRES 1 B 222 ALA GLU SER LEU PRO ASP LEU LYS ILE GLU LYS LEU ASP SEQRES 2 B 222 GLU GLY VAL TYR VAL HIS THR SER PHE GLU GLU VAL ASN SEQRES 3 B 222 GLY TRP GLY VAL VAL PRO LYS HIS GLY LEU VAL VAL LEU SEQRES 4 B 222 VAL ASN ALA GLU ALA TYR LEU ILE ASP THR PRO PHE THR SEQRES 5 B 222 ALA LYS ASP THR GLU LYS LEU VAL THR TRP PHE VAL GLU SEQRES 6 B 222 ARG GLY TYR LYS ILE LYS GLY SER ILE SER SER HIS PHE SEQRES 7 B 222 HIS SER ASP SER THR GLY GLY ILE GLU TRP LEU ASN SER SEQRES 8 B 222 ARG SER ILE PRO THR TYR ALA SER GLU LEU THR ASN GLU SEQRES 9 B 222 LEU LEU LYS LYS ASP GLY LYS VAL GLN ALA THR ASN SER SEQRES 10 B 222 PHE SER GLY VAL ASN TYR TRP LEU VAL LYS ASN LYS ILE SEQRES 11 B 222 GLU VAL PHE TYR PRO GLY PRO GLY HIS THR PRO ASP ASN SEQRES 12 B 222 VAL VAL VAL TRP LEU PRO GLU ARG LYS ILE LEU PHE GLY SEQRES 13 B 222 GLY CYS PHE ILE LYS PRO TYR GLY LEU GLY ASN LEU GLY SEQRES 14 B 222 ASP ALA ASN ILE GLU ALA TRP PRO LYS SER ALA LYS LEU SEQRES 15 B 222 LEU LYS SER LYS TYR GLY LYS ALA LYS LEU VAL VAL PRO SEQRES 16 B 222 SER HIS SER GLU VAL GLY ASP ALA SER LEU LEU LYS LEU SEQRES 17 B 222 THR LEU GLU GLN ALA VAL LYS GLY LEU ASN GLU SER LYS SEQRES 18 B 222 LYS HET ZN A 301 1 HET ZN A 302 1 HET C93 A 303 19 HET ZN B 301 1 HET ZN B 302 1 HET C93 B 303 19 HETNAM ZN ZINC ION HETNAM C93 3-(4-HYDROXYPIPERIDIN-1-YL)BENZENE-1,2-DICARBOXYLIC HETNAM 2 C93 ACID HETSYN C93 3-(4-HYDROXYPIPERIDINE-1-YL) PHTHALIC ACID FORMUL 3 ZN 4(ZN 2+) FORMUL 5 C93 2(C13 H15 N O5) FORMUL 9 HOH *51(H2 O) HELIX 1 1 THR A 52 GLU A 65 1 14 HELIX 2 2 HIS A 79 GLY A 84 1 6 HELIX 3 3 GLY A 85 ARG A 92 1 8 HELIX 4 4 GLU A 100 ASP A 109 1 10 HELIX 5 5 CYS A 158 ILE A 160 5 3 HELIX 6 6 ALA A 175 GLY A 188 1 14 HELIX 7 7 ALA A 203 SER A 220 1 18 HELIX 8 8 THR B 52 GLU B 65 1 14 HELIX 9 9 HIS B 79 GLY B 84 1 6 HELIX 10 10 GLY B 85 ARG B 92 1 8 HELIX 11 11 GLU B 100 ASP B 109 1 10 HELIX 12 12 ALA B 175 GLY B 188 1 14 HELIX 13 13 ALA B 203 GLU B 219 1 17 SHEET 1 A 7 LYS A 8 ASP A 13 0 SHEET 2 A 7 VAL A 16 VAL A 25 -1 O THR A 20 N LYS A 8 SHEET 3 A 7 GLY A 29 VAL A 40 -1 O VAL A 37 N TYR A 17 SHEET 4 A 7 GLU A 43 ILE A 47 -1 O ILE A 47 N LEU A 36 SHEET 5 A 7 LYS A 69 ILE A 74 1 O LYS A 69 N ALA A 44 SHEET 6 A 7 THR A 96 SER A 99 1 O TYR A 97 N SER A 73 SHEET 7 A 7 ASN A 116 PHE A 118 1 O ASN A 116 N THR A 96 SHEET 1 B 5 ASN A 122 VAL A 126 0 SHEET 2 B 5 ILE A 130 PHE A 133 -1 O VAL A 132 N TYR A 123 SHEET 3 B 5 VAL A 145 LEU A 148 -1 O VAL A 145 N PHE A 133 SHEET 4 B 5 ILE A 153 GLY A 157 -1 O PHE A 155 N VAL A 146 SHEET 5 B 5 LEU A 192 PRO A 195 1 O VAL A 194 N LEU A 154 SHEET 1 C 7 LYS B 8 ASP B 13 0 SHEET 2 C 7 VAL B 16 VAL B 25 -1 O VAL B 18 N GLU B 10 SHEET 3 C 7 GLY B 29 VAL B 40 -1 O VAL B 31 N GLU B 23 SHEET 4 C 7 GLU B 43 ILE B 47 -1 O ILE B 47 N LEU B 36 SHEET 5 C 7 LYS B 69 ILE B 74 1 O LYS B 69 N ALA B 44 SHEET 6 C 7 THR B 96 SER B 99 1 O TYR B 97 N SER B 73 SHEET 7 C 7 ASN B 116 PHE B 118 1 O ASN B 116 N THR B 96 SHEET 1 D 5 ASN B 122 VAL B 126 0 SHEET 2 D 5 ILE B 130 PHE B 133 -1 O VAL B 132 N TYR B 123 SHEET 3 D 5 VAL B 145 LEU B 148 -1 O TRP B 147 N GLU B 131 SHEET 4 D 5 ILE B 153 GLY B 157 -1 O PHE B 155 N VAL B 146 SHEET 5 D 5 LEU B 192 PRO B 195 1 O VAL B 194 N LEU B 154 LINK NE2 HIS A 77 ZN ZN A 301 1555 1555 2.20 LINK ND1 HIS A 79 ZN ZN A 301 1555 1555 1.91 LINK OD2 ASP A 81 ZN ZN A 302 1555 1555 2.11 LINK NE2 HIS A 139 ZN ZN A 301 1555 1555 1.97 LINK SG CYS A 158 ZN ZN A 302 1555 1555 2.26 LINK NE2 HIS A 197 ZN ZN A 302 1555 1555 2.15 LINK ZN ZN A 301 O8 C93 A 303 1555 1555 2.07 LINK ZN ZN A 301 O9 C93 A 303 1555 1555 2.65 LINK ZN ZN A 302 O8 C93 A 303 1555 1555 2.03 LINK NE2 HIS B 77 ZN ZN B 301 1555 1555 2.05 LINK ND1 HIS B 79 ZN ZN B 301 1555 1555 2.00 LINK OD2 ASP B 81 ZN ZN B 302 1555 1555 2.02 LINK NE2 HIS B 139 ZN ZN B 301 1555 1555 2.06 LINK SG CYS B 158 ZN ZN B 302 1555 1555 2.31 LINK NE2 HIS B 197 ZN ZN B 302 1555 1555 1.95 LINK ZN ZN B 301 O8 C93 B 303 1555 1555 2.07 LINK ZN ZN B 301 O9 C93 B 303 1555 1555 2.67 LINK ZN ZN B 302 O8 C93 B 303 1555 1555 2.08 SITE 1 AC1 5 HIS A 77 HIS A 79 HIS A 139 ZN A 302 SITE 2 AC1 5 C93 A 303 SITE 1 AC2 5 ASP A 81 CYS A 158 HIS A 197 ZN A 301 SITE 2 AC2 5 C93 A 303 SITE 1 AC3 13 VAL A 31 HIS A 77 HIS A 79 SER A 80 SITE 2 AC3 13 ASP A 81 HIS A 139 CYS A 158 LYS A 161 SITE 3 AC3 13 GLY A 166 ASN A 167 HIS A 197 ZN A 301 SITE 4 AC3 13 ZN A 302 SITE 1 AC4 5 HIS B 77 HIS B 79 HIS B 139 ZN B 302 SITE 2 AC4 5 C93 B 303 SITE 1 AC5 5 ASP B 81 CYS B 158 HIS B 197 ZN B 301 SITE 2 AC5 5 C93 B 303 SITE 1 AC6 12 HIS B 77 HIS B 79 SER B 80 ASP B 81 SITE 2 AC6 12 HIS B 139 CYS B 158 LYS B 161 GLY B 166 SITE 3 AC6 12 ASN B 167 HIS B 197 ZN B 301 ZN B 302 CRYST1 49.994 52.795 198.384 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020003 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018941 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005041 0.00000