HEADER TRANSLATION 22-AUG-14 3WYA TITLE CRYSTAL STRUCTURE OF GDP-BOUND EF1ALPHA FROM PYROCOCCUS HORIKOSHII COMPND MOL_ID: 1; COMPND 2 MOLECULE: ELONGATION FACTOR 1-ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EF-1-ALPHA, ELONGATION FACTOR TU, EF-TU; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS HORIKOSHII OT3; SOURCE 3 ORGANISM_TAXID: 70601; SOURCE 4 GENE: TUF, PH1484, PHCC033; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MULTI-DOMAIN, GTPASE, AMINOACYL-TRNA DELIVERY, GTP, STALK PROTEIN, KEYWDS 2 TRANSLATION EXPDTA X-RAY DIFFRACTION AUTHOR K.ITO,T.HONDA,T.SUZUKI,T.MIYOSHI,R.MURAKAMI,M.YAO,T.UCHIUMI REVDAT 3 29-MAY-24 3WYA 1 REMARK REVDAT 2 24-AUG-22 3WYA 1 JRNL REMARK SEQADV REVDAT 1 24-DEC-14 3WYA 0 JRNL AUTH K.ITO,T.HONDA,T.SUZUKI,T.MIYOSHI,R.MURAKAMI,M.YAO,T.UCHIUMI JRNL TITL MOLECULAR INSIGHTS INTO THE INTERACTION OF THE RIBOSOMAL JRNL TITL 2 STALK PROTEIN WITH ELONGATION FACTOR 1 ALPHA. JRNL REF NUCLEIC ACIDS RES. V. 42 14042 2014 JRNL REFN ESSN 1362-4962 JRNL PMID 25428348 JRNL DOI 10.1093/NAR/GKU1248 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 3 NUMBER OF REFLECTIONS : 19771 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1076 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1223 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.75 REMARK 3 BIN R VALUE (WORKING SET) : 0.2300 REMARK 3 BIN FREE R VALUE SET COUNT : 59 REMARK 3 BIN FREE R VALUE : 0.2800 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3087 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 76 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.54000 REMARK 3 B22 (A**2) : -2.56000 REMARK 3 B33 (A**2) : -0.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.322 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.239 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.156 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.192 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3186 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4330 ; 1.239 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 393 ; 5.984 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 126 ;37.479 ;24.524 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 562 ;14.314 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;14.438 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 500 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2341 ; 0.005 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 427 REMARK 3 RESIDUE RANGE : A 500 A 500 REMARK 3 ORIGIN FOR THE GROUP (A): 21.6203 44.3352 16.0112 REMARK 3 T TENSOR REMARK 3 T11: 0.0240 T22: 0.0648 REMARK 3 T33: 0.0201 T12: -0.0056 REMARK 3 T13: 0.0157 T23: -0.0205 REMARK 3 L TENSOR REMARK 3 L11: 0.1528 L22: 1.2179 REMARK 3 L33: 0.5580 L12: 0.0432 REMARK 3 L13: 0.1491 L23: -0.2321 REMARK 3 S TENSOR REMARK 3 S11: -0.0089 S12: 0.0235 S13: -0.0057 REMARK 3 S21: 0.0241 S22: -0.0265 S23: 0.0609 REMARK 3 S31: 0.0080 S32: 0.0056 S33: 0.0354 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 3WYA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000096944. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20974 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM HEPES-NAOH, PH 7.5, 10% (W/V) REMARK 280 PEG 6000, 5% (V/V) 2-METHYL-2,4-PENTANEDIOL, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.84000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.08700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.13950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.08700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.84000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.13950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 LYS A 3 REMARK 465 GLU A 4 REMARK 465 GLU A 36 REMARK 465 THR A 37 REMARK 465 ILE A 38 REMARK 465 ILE A 39 REMARK 465 LYS A 40 REMARK 465 LYS A 41 REMARK 465 PHE A 42 REMARK 465 GLU A 43 REMARK 465 GLU A 44 REMARK 465 MET A 45 REMARK 465 GLY A 46 REMARK 465 GLU A 47 REMARK 465 LYS A 48 REMARK 465 GLY A 49 REMARK 465 LYS A 50 REMARK 465 SER A 51 REMARK 465 PHE A 52 REMARK 465 ARG A 65 REMARK 465 GLU A 66 REMARK 465 ARG A 67 REMARK 465 GLY A 68 REMARK 465 ILE A 69 REMARK 465 THR A 70 REMARK 465 ILE A 71 REMARK 465 ASP A 72 REMARK 465 VAL A 73 REMARK 465 ALA A 74 REMARK 465 GLU A 428 REMARK 465 HIS A 429 REMARK 465 HIS A 430 REMARK 465 HIS A 431 REMARK 465 HIS A 432 REMARK 465 HIS A 433 REMARK 465 HIS A 434 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 57 -52.56 106.04 REMARK 500 THR A 334 -99.69 -137.27 REMARK 500 HIS A 347 -113.03 41.48 REMARK 500 GLU A 400 -64.14 -90.64 REMARK 500 ASP A 411 147.67 -170.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WY9 RELATED DB: PDB DBREF 3WYA A 1 428 UNP O59153 EF1A_PYRHO 1 428 SEQADV 3WYA HIS A 429 UNP O59153 EXPRESSION TAG SEQADV 3WYA HIS A 430 UNP O59153 EXPRESSION TAG SEQADV 3WYA HIS A 431 UNP O59153 EXPRESSION TAG SEQADV 3WYA HIS A 432 UNP O59153 EXPRESSION TAG SEQADV 3WYA HIS A 433 UNP O59153 EXPRESSION TAG SEQADV 3WYA HIS A 434 UNP O59153 EXPRESSION TAG SEQRES 1 A 434 MET PRO LYS GLU LYS PRO HIS VAL ASN ILE VAL PHE ILE SEQRES 2 A 434 GLY HIS VAL ASP HIS GLY LYS SER THR THR ILE GLY ARG SEQRES 3 A 434 LEU LEU TYR ASP THR GLY ASN ILE PRO GLU THR ILE ILE SEQRES 4 A 434 LYS LYS PHE GLU GLU MET GLY GLU LYS GLY LYS SER PHE SEQRES 5 A 434 LYS PHE ALA TRP VAL MET ASP ARG LEU LYS GLU GLU ARG SEQRES 6 A 434 GLU ARG GLY ILE THR ILE ASP VAL ALA HIS THR LYS PHE SEQRES 7 A 434 GLU THR PRO HIS ARG TYR ILE THR ILE ILE ASP ALA PRO SEQRES 8 A 434 GLY HIS ARG ASP PHE VAL LYS ASN MET ILE THR GLY ALA SEQRES 9 A 434 SER GLN ALA ASP ALA ALA VAL LEU VAL VAL ALA ALA THR SEQRES 10 A 434 ASP GLY VAL MET PRO GLN THR LYS GLU HIS ALA PHE LEU SEQRES 11 A 434 ALA ARG THR LEU GLY ILE LYS HIS ILE ILE VAL THR ILE SEQRES 12 A 434 ASN LYS MET ASP MET VAL ASN TYR ASP GLN LYS VAL PHE SEQRES 13 A 434 GLU LYS VAL LYS ALA GLN VAL GLU LYS LEU LEU LYS THR SEQRES 14 A 434 LEU GLY TYR LYS ASP PHE PRO VAL ILE PRO THR SER ALA SEQRES 15 A 434 TRP ASN GLY ASP ASN VAL VAL LYS LYS SER ASP LYS MET SEQRES 16 A 434 PRO TRP TYR ASN GLY PRO THR LEU ILE GLU ALA LEU ASP SEQRES 17 A 434 GLN ILE PRO GLU PRO GLU LYS PRO ILE ASP LYS PRO LEU SEQRES 18 A 434 ARG ILE PRO ILE GLN ASP VAL TYR SER ILE LYS GLY VAL SEQRES 19 A 434 GLY THR VAL PRO VAL GLY ARG VAL GLU THR GLY LYS LEU SEQRES 20 A 434 LYS VAL GLY ASP VAL VAL ILE PHE GLU PRO ALA SER THR SEQRES 21 A 434 ILE PHE HIS LYS PRO ILE GLN GLY GLU VAL LYS SER ILE SEQRES 22 A 434 GLU MET HIS HIS GLU PRO LEU GLN GLU ALA LEU PRO GLY SEQRES 23 A 434 ASP ASN ILE GLY PHE ASN VAL ARG GLY VAL SER LYS ASN SEQRES 24 A 434 ASP ILE LYS ARG GLY ASP VAL ALA GLY HIS THR ASP LYS SEQRES 25 A 434 PRO PRO THR VAL VAL ARG THR LYS ASP THR PHE LYS ALA SEQRES 26 A 434 GLN ILE ILE VAL LEU ASN HIS PRO THR ALA ILE THR VAL SEQRES 27 A 434 GLY TYR SER PRO VAL LEU HIS ALA HIS THR ALA GLN ILE SEQRES 28 A 434 PRO VAL ARG PHE GLU GLN ILE LEU ALA LYS VAL ASP PRO SEQRES 29 A 434 ARG THR GLY ASN ILE VAL GLU GLU ASN PRO GLN PHE ILE SEQRES 30 A 434 LYS THR GLY ASP SER ALA ILE VAL VAL LEU ARG PRO MET SEQRES 31 A 434 LYS PRO VAL VAL LEU GLU PRO VAL LYS GLU ILE PRO GLN SEQRES 32 A 434 LEU GLY ARG PHE ALA ILE ARG ASP MET GLY MET THR ILE SEQRES 33 A 434 ALA ALA GLY MET VAL ILE SER ILE GLN LYS GLY GLU HIS SEQRES 34 A 434 HIS HIS HIS HIS HIS HET GDP A 500 28 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE FORMUL 2 GDP C10 H15 N5 O11 P2 FORMUL 3 HOH *76(H2 O) HELIX 1 1 GLY A 19 THR A 31 1 13 HELIX 2 2 PHE A 54 GLU A 64 1 11 HELIX 3 3 ASP A 95 THR A 102 1 8 HELIX 4 4 MET A 121 LEU A 134 1 14 HELIX 5 5 LYS A 145 ASN A 150 5 6 HELIX 6 6 ASP A 152 LEU A 170 1 19 HELIX 7 7 THR A 202 ASP A 208 1 7 HELIX 8 8 LYS A 215 LYS A 219 5 5 HELIX 9 9 PRO A 257 HIS A 263 1 7 HELIX 10 10 SER A 297 ILE A 301 5 5 HELIX 11 11 ILE A 401 LEU A 404 5 4 SHEET 1 A 6 THR A 76 GLU A 79 0 SHEET 2 A 6 TYR A 84 ASP A 89 -1 O ILE A 85 N PHE A 78 SHEET 3 A 6 HIS A 7 ILE A 13 1 N ILE A 10 O THR A 86 SHEET 4 A 6 ALA A 109 ALA A 115 1 O VAL A 113 N ILE A 13 SHEET 5 A 6 HIS A 138 ASN A 144 1 O THR A 142 N VAL A 114 SHEET 6 A 6 VAL A 177 PRO A 179 1 O ILE A 178 N VAL A 141 SHEET 1 B 8 GLU A 278 LEU A 280 0 SHEET 2 B 8 GLN A 267 MET A 275 -1 N MET A 275 O GLU A 278 SHEET 3 B 8 ASN A 288 VAL A 293 -1 O GLY A 290 N GLU A 274 SHEET 4 B 8 GLY A 235 ARG A 241 -1 N GLY A 240 O ILE A 289 SHEET 5 B 8 ILE A 223 ILE A 231 -1 N ILE A 231 O GLY A 235 SHEET 6 B 8 VAL A 306 HIS A 309 -1 O ALA A 307 N ILE A 223 SHEET 7 B 8 VAL A 252 GLU A 256 -1 N ILE A 254 O GLY A 308 SHEET 8 B 8 GLN A 267 MET A 275 -1 O GLY A 268 N VAL A 253 SHEET 1 C 2 LEU A 247 LYS A 248 0 SHEET 2 C 2 GLU A 282 ALA A 283 -1 O ALA A 283 N LEU A 247 SHEET 1 D 2 VAL A 316 VAL A 317 0 SHEET 2 D 2 VAL A 393 VAL A 394 -1 O VAL A 393 N VAL A 317 SHEET 1 E 8 ILE A 369 GLU A 372 0 SHEET 2 E 8 ALA A 349 VAL A 362 -1 N LYS A 361 O GLU A 371 SHEET 3 E 8 SER A 382 PRO A 389 -1 O SER A 382 N VAL A 362 SHEET 4 E 8 THR A 322 VAL A 329 -1 N PHE A 323 O LEU A 387 SHEET 5 E 8 MET A 414 GLN A 425 -1 O ILE A 422 N LYS A 324 SHEET 6 E 8 ARG A 406 ASP A 411 -1 N ILE A 409 O ALA A 417 SHEET 7 E 8 VAL A 343 ALA A 346 -1 N HIS A 345 O ALA A 408 SHEET 8 E 8 ALA A 349 VAL A 362 -1 O ILE A 351 N LEU A 344 CISPEP 1 GLU A 256 PRO A 257 0 3.57 SITE 1 AC1 16 ASP A 17 HIS A 18 GLY A 19 LYS A 20 SITE 2 AC1 16 SER A 21 THR A 22 ASN A 144 LYS A 145 SITE 3 AC1 16 ASP A 147 MET A 148 SER A 181 ALA A 182 SITE 4 AC1 16 TRP A 183 LYS A 232 GLY A 233 HOH A 676 CRYST1 47.680 78.279 138.174 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020973 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012775 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007237 0.00000