HEADER BIOTIN BINDING PROTEIN 01-OCT-14 3WZN TITLE CRYSTAL STRUCTURE OF THE CORE STREPTAVIDIN MUTANT V21 TITLE 2 (Y22S/N23D/S27D/Y83S/R84K/E101D/R103K/E116N) COMPLEXED WITH BIOTIN AT TITLE 3 1.3 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: STREPTAVIDIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 37-163; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES AVIDINII; SOURCE 3 ORGANISM_TAXID: 1895; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21STAR(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PCOLD TF KEYWDS BETA-BARREL, BIOTIN BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.KAWATO,E.MIZOHATA,Y.SHIMIZU,T.MESHIZUKA,T.YAMAMOTO,N.TAKASU, AUTHOR 2 M.MATSUOKA,H.MATSUMURA,K.TSUMOTO,T.KODAMA,M.KANAI,H.DOI,T.INOUE, AUTHOR 3 A.SUGIYAMA REVDAT 4 08-NOV-23 3WZN 1 REMARK REVDAT 3 24-AUG-22 3WZN 1 JRNL REMARK SEQADV REVDAT 2 22-NOV-17 3WZN 1 REMARK REVDAT 1 18-FEB-15 3WZN 0 JRNL AUTH T.KAWATO,E.MIZOHATA,Y.SHIMIZU,T.MESHIZUKA,T.YAMAMOTO, JRNL AUTH 2 N.TAKASU,M.MATSUOKA,H.MATSUMURA,T.KODAMA,M.KANAI,H.DOI, JRNL AUTH 3 T.INOUE,A.SUGIYAMA JRNL TITL STRUCTURE-BASED DESIGN OF A STREPTAVIDIN MUTANT SPECIFIC FOR JRNL TITL 2 AN ARTIFICIAL BIOTIN ANALOGUE. JRNL REF J.BIOCHEM. V. 157 467 2015 JRNL REFN ISSN 0021-924X JRNL PMID 25645976 JRNL DOI 10.1093/JB/MVV004 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 51662 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2761 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3744 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.3230 REMARK 3 BIN FREE R VALUE SET COUNT : 206 REMARK 3 BIN FREE R VALUE : 0.3460 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1801 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 37 REMARK 3 SOLVENT ATOMS : 222 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.29000 REMARK 3 B22 (A**2) : -0.65000 REMARK 3 B33 (A**2) : 0.93000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.054 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.055 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.041 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.288 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1929 ; 0.026 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2656 ; 2.328 ; 1.916 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 263 ; 7.196 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 75 ;27.963 ;25.200 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 260 ;13.610 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;21.876 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 303 ; 0.325 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1476 ; 0.014 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1230 ; 2.767 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1961 ; 3.824 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 699 ; 5.341 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 686 ; 7.112 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 1929 ; 2.719 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3WZN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000096993. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54829 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 26.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.40600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3WYQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM ACETATE TRIHYDRATE, 2.0 REMARK 280 M AMMONIUM SULFATE, PH 4.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 33.83850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.17200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.83850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.17200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -54.34400 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 135 REMARK 465 SER A 136 REMARK 465 ALA A 137 REMARK 465 ALA A 138 REMARK 465 SER A 139 REMARK 465 LYS B 134 REMARK 465 PRO B 135 REMARK 465 SER B 136 REMARK 465 ALA B 137 REMARK 465 ALA B 138 REMARK 465 SER B 139 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1196 O HOH A 1228 2.11 REMARK 500 O HOH A 1177 O HOH A 1213 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1150 O HOH A 1161 2545 1.12 REMARK 500 O HOH A 1223 O HOH B 1188 4545 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 128 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 128 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 LEU B 56 CA - CB - CG ANGL. DEV. = 18.4 DEGREES REMARK 500 LEU B 56 CB - CG - CD1 ANGL. DEV. = 19.2 DEGREES REMARK 500 THR B 115 OG1 - CB - CG2 ANGL. DEV. = 15.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 52 -151.38 64.66 REMARK 500 ASP A 101 75.01 -117.42 REMARK 500 SER B 52 -150.04 64.52 REMARK 500 SER B 52 -151.22 66.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTN A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTN B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WZO RELATED DB: PDB REMARK 900 THE MUTANT V21 COMPLEXED WITH BIOTIN LONG TAIL (BTNTAIL) REMARK 900 RELATED ID: 3WZP RELATED DB: PDB REMARK 900 THE MUTANT V21 COMPLEXED WITH IMINOBIOTIN LONG TAIL (IMNTAIL) REMARK 900 RELATED ID: 3WZQ RELATED DB: PDB REMARK 900 THE MUTANT V21 COMPLEXED WITH IMINOBIOTIN LONG TAIL (IMNTAIL) 1.7 A REMARK 900 RESOLUTION DBREF 3WZN A 13 139 UNP P22629 SAV_STRAV 37 163 DBREF 3WZN B 13 139 UNP P22629 SAV_STRAV 37 163 SEQADV 3WZN GLY A 11 UNP P22629 EXPRESSION TAG SEQADV 3WZN PRO A 12 UNP P22629 EXPRESSION TAG SEQADV 3WZN SER A 22 UNP P22629 TYR 46 ENGINEERED MUTATION SEQADV 3WZN ASP A 23 UNP P22629 ASN 47 ENGINEERED MUTATION SEQADV 3WZN ASP A 27 UNP P22629 SER 51 ENGINEERED MUTATION SEQADV 3WZN SER A 83 UNP P22629 TYR 107 ENGINEERED MUTATION SEQADV 3WZN LYS A 84 UNP P22629 ARG 108 ENGINEERED MUTATION SEQADV 3WZN ASP A 101 UNP P22629 GLU 125 ENGINEERED MUTATION SEQADV 3WZN LYS A 103 UNP P22629 ARG 127 ENGINEERED MUTATION SEQADV 3WZN ASN A 116 UNP P22629 GLU 140 ENGINEERED MUTATION SEQADV 3WZN GLY B 11 UNP P22629 EXPRESSION TAG SEQADV 3WZN PRO B 12 UNP P22629 EXPRESSION TAG SEQADV 3WZN SER B 22 UNP P22629 TYR 46 ENGINEERED MUTATION SEQADV 3WZN ASP B 23 UNP P22629 ASN 47 ENGINEERED MUTATION SEQADV 3WZN ASP B 27 UNP P22629 SER 51 ENGINEERED MUTATION SEQADV 3WZN SER B 83 UNP P22629 TYR 107 ENGINEERED MUTATION SEQADV 3WZN LYS B 84 UNP P22629 ARG 108 ENGINEERED MUTATION SEQADV 3WZN ASP B 101 UNP P22629 GLU 125 ENGINEERED MUTATION SEQADV 3WZN LYS B 103 UNP P22629 ARG 127 ENGINEERED MUTATION SEQADV 3WZN ASN B 116 UNP P22629 GLU 140 ENGINEERED MUTATION SEQRES 1 A 129 GLY PRO ALA GLU ALA GLY ILE THR GLY THR TRP SER ASP SEQRES 2 A 129 GLN LEU GLY ASP THR PHE ILE VAL THR ALA GLY ALA ASP SEQRES 3 A 129 GLY ALA LEU THR GLY THR TYR GLU SER ALA VAL GLY ASN SEQRES 4 A 129 ALA GLU SER ARG TYR VAL LEU THR GLY ARG TYR ASP SER SEQRES 5 A 129 ALA PRO ALA THR ASP GLY SER GLY THR ALA LEU GLY TRP SEQRES 6 A 129 THR VAL ALA TRP LYS ASN ASN SER LYS ASN ALA HIS SER SEQRES 7 A 129 ALA THR THR TRP SER GLY GLN TYR VAL GLY GLY ALA ASP SEQRES 8 A 129 ALA LYS ILE ASN THR GLN TRP LEU LEU THR SER GLY THR SEQRES 9 A 129 THR ASN ALA ASN ALA TRP LYS SER THR LEU VAL GLY HIS SEQRES 10 A 129 ASP THR PHE THR LYS VAL LYS PRO SER ALA ALA SER SEQRES 1 B 129 GLY PRO ALA GLU ALA GLY ILE THR GLY THR TRP SER ASP SEQRES 2 B 129 GLN LEU GLY ASP THR PHE ILE VAL THR ALA GLY ALA ASP SEQRES 3 B 129 GLY ALA LEU THR GLY THR TYR GLU SER ALA VAL GLY ASN SEQRES 4 B 129 ALA GLU SER ARG TYR VAL LEU THR GLY ARG TYR ASP SER SEQRES 5 B 129 ALA PRO ALA THR ASP GLY SER GLY THR ALA LEU GLY TRP SEQRES 6 B 129 THR VAL ALA TRP LYS ASN ASN SER LYS ASN ALA HIS SER SEQRES 7 B 129 ALA THR THR TRP SER GLY GLN TYR VAL GLY GLY ALA ASP SEQRES 8 B 129 ALA LYS ILE ASN THR GLN TRP LEU LEU THR SER GLY THR SEQRES 9 B 129 THR ASN ALA ASN ALA TRP LYS SER THR LEU VAL GLY HIS SEQRES 10 B 129 ASP THR PHE THR LYS VAL LYS PRO SER ALA ALA SER HET BTN A1001 16 HET BTN B1001 16 HET SO4 B1002 5 HETNAM BTN BIOTIN HETNAM SO4 SULFATE ION FORMUL 3 BTN 2(C10 H16 N2 O3 S) FORMUL 5 SO4 O4 S 2- FORMUL 6 HOH *222(H2 O) HELIX 1 1 GLY A 11 THR A 18 1 8 HELIX 2 2 THR A 115 LYS A 121 5 7 HELIX 3 3 PRO B 12 THR B 18 1 7 HELIX 4 4 ASN B 118 LYS B 121 5 4 SHEET 1 A 9 GLY A 19 SER A 22 0 SHEET 2 A 9 THR A 28 ALA A 33 -1 O PHE A 29 N TRP A 21 SHEET 3 A 9 ALA A 38 GLU A 44 -1 O GLU A 44 N THR A 28 SHEET 4 A 9 TYR A 54 TYR A 60 -1 O LEU A 56 N GLY A 41 SHEET 5 A 9 THR A 71 LYS A 80 -1 O THR A 76 N THR A 57 SHEET 6 A 9 ASN A 85 VAL A 97 -1 O THR A 90 N VAL A 77 SHEET 7 A 9 LYS A 103 SER A 112 -1 O LYS A 103 N VAL A 97 SHEET 8 A 9 THR A 123 LYS A 134 -1 O PHE A 130 N ILE A 104 SHEET 9 A 9 GLY A 19 SER A 22 -1 N THR A 20 O VAL A 133 SHEET 1 B 9 GLY B 19 SER B 22 0 SHEET 2 B 9 THR B 28 ALA B 33 -1 O PHE B 29 N TRP B 21 SHEET 3 B 9 ALA B 38 GLU B 44 -1 O GLU B 44 N THR B 28 SHEET 4 B 9 TYR B 54 TYR B 60 -1 O TYR B 54 N TYR B 43 SHEET 5 B 9 THR B 71 LYS B 80 -1 O THR B 76 N THR B 57 SHEET 6 B 9 ASN B 85 VAL B 97 -1 O THR B 90 N VAL B 77 SHEET 7 B 9 LYS B 103 SER B 112 -1 O GLN B 107 N SER B 93 SHEET 8 B 9 THR B 123 LYS B 132 -1 O PHE B 130 N ILE B 104 SHEET 9 B 9 GLY B 19 SER B 22 -1 N SER B 22 O THR B 131 SITE 1 AC1 11 ASP A 27 TYR A 43 SER A 45 VAL A 47 SITE 2 AC1 11 ASN A 49 TRP A 79 SER A 88 THR A 90 SITE 3 AC1 11 TRP A 108 HOH A1184 HOH A1205 SITE 1 AC2 11 ASP B 27 TYR B 43 SER B 45 VAL B 47 SITE 2 AC2 11 ASN B 49 TRP B 79 SER B 88 THR B 90 SITE 3 AC2 11 TRP B 108 HOH B1128 HOH B1174 SITE 1 AC3 5 ARG B 53 THR B 115 ASN B 116 ALA B 117 SITE 2 AC3 5 HOH B1194 CRYST1 67.677 54.344 60.064 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014776 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018401 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016649 0.00000