data_3X2L # _entry.id 3X2L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code RCSB RCSB097099 PDB 3X2L WWPDB D_1000097099 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3x2g . unspecified PDB 3x2h . unspecified PDB 3x2i . unspecified PDB 3x2j . unspecified PDB 3x2k . unspecified PDB 3x2m . unspecified PDB 3x2n . unspecified PDB 3x2o . unspecified PDB 3x2p . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3X2L _pdbx_database_status.recvd_initial_deposition_date 2014-12-22 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nakamura, A.' 1 'Ishida, T.' 2 'Ohta, K.' 3 'Tanaka, H.' 4 'Inaka, K.' 5 'Samejima, M.' 6 'Igarashi, K.' 7 # _citation.id primary _citation.title ;"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography. ; _citation.journal_abbrev 'Sci Adv' _citation.journal_volume 1 _citation.page_first e1500263 _citation.page_last e1500263 _citation.year 2015 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 2375-2548 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26601228 _citation.pdbx_database_id_DOI 10.1126/sciadv.1500263 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nakamura, A.' 1 ? primary 'Ishida, T.' 2 ? primary 'Kusaka, K.' 3 ? primary 'Yamada, T.' 4 ? primary 'Fushinobu, S.' 5 ? primary 'Tanaka, I.' 6 ? primary 'Kaneko, S.' 7 ? primary 'Ohta, K.' 8 ? primary 'Tanaka, H.' 9 ? primary 'Inaka, K.' 10 ? primary 'Higuchi, Y.' 11 ? primary 'Niimura, N.' 12 ? primary 'Samejima, M.' 13 ? primary 'Igarashi, K.' 14 ? # _cell.entry_id 3X2L _cell.length_a 45.450 _cell.length_b 58.086 _cell.length_c 62.862 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3X2L _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Endoglucanase V-like protein' 18178.793 1 ? ? 'UNP residues 27-206' ? 2 non-polymer syn 3-methylpentane-1,5-diol 118.174 4 ? ? ? ? 3 non-polymer syn 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 122.143 1 ? ? ? ? 4 water nat water 18.015 214 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIV VKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLS GETAPNWPSTACGNKGTAPS ; _entity_poly.pdbx_seq_one_letter_code_can ;ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIV VKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLS GETAPNWPSTACGNKGTAPS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 THR n 1 3 GLY n 1 4 GLY n 1 5 TYR n 1 6 VAL n 1 7 GLN n 1 8 GLN n 1 9 ALA n 1 10 THR n 1 11 GLY n 1 12 GLN n 1 13 ALA n 1 14 SER n 1 15 PHE n 1 16 THR n 1 17 MET n 1 18 TYR n 1 19 SER n 1 20 GLY n 1 21 CYS n 1 22 GLY n 1 23 SER n 1 24 PRO n 1 25 ALA n 1 26 CYS n 1 27 GLY n 1 28 LYS n 1 29 ALA n 1 30 ALA n 1 31 SER n 1 32 GLY n 1 33 PHE n 1 34 THR n 1 35 ALA n 1 36 ALA n 1 37 ILE n 1 38 ASN n 1 39 GLN n 1 40 LEU n 1 41 ALA n 1 42 PHE n 1 43 GLY n 1 44 SER n 1 45 ALA n 1 46 PRO n 1 47 GLY n 1 48 LEU n 1 49 GLY n 1 50 ALA n 1 51 GLY n 1 52 ASP n 1 53 ALA n 1 54 CYS n 1 55 GLY n 1 56 ARG n 1 57 CYS n 1 58 PHE n 1 59 ALA n 1 60 LEU n 1 61 THR n 1 62 GLY n 1 63 ASN n 1 64 HIS n 1 65 ASP n 1 66 PRO n 1 67 TYR n 1 68 SER n 1 69 PRO n 1 70 ASN n 1 71 TYR n 1 72 THR n 1 73 GLY n 1 74 PRO n 1 75 PHE n 1 76 GLY n 1 77 GLN n 1 78 THR n 1 79 ILE n 1 80 VAL n 1 81 VAL n 1 82 LYS n 1 83 VAL n 1 84 THR n 1 85 ASP n 1 86 LEU n 1 87 CYS n 1 88 PRO n 1 89 VAL n 1 90 GLN n 1 91 GLY n 1 92 ASN n 1 93 GLN n 1 94 GLU n 1 95 PHE n 1 96 CYS n 1 97 GLY n 1 98 GLN n 1 99 THR n 1 100 THR n 1 101 SER n 1 102 ASN n 1 103 PRO n 1 104 THR n 1 105 ASN n 1 106 GLN n 1 107 HIS n 1 108 GLY n 1 109 MET n 1 110 PRO n 1 111 PHE n 1 112 HIS n 1 113 PHE n 1 114 ASP n 1 115 ILE n 1 116 CYS n 1 117 GLU n 1 118 ASP n 1 119 THR n 1 120 GLY n 1 121 GLY n 1 122 SER n 1 123 ALA n 1 124 LYS n 1 125 PHE n 1 126 PHE n 1 127 PRO n 1 128 SER n 1 129 GLY n 1 130 HIS n 1 131 GLY n 1 132 ALA n 1 133 LEU n 1 134 THR n 1 135 GLY n 1 136 THR n 1 137 PHE n 1 138 THR n 1 139 GLU n 1 140 VAL n 1 141 SER n 1 142 CYS n 1 143 SER n 1 144 GLN n 1 145 TRP n 1 146 SER n 1 147 GLY n 1 148 SER n 1 149 ASP n 1 150 GLY n 1 151 GLY n 1 152 GLN n 1 153 LEU n 1 154 TRP n 1 155 ASN n 1 156 GLY n 1 157 ALA n 1 158 CYS n 1 159 LEU n 1 160 SER n 1 161 GLY n 1 162 GLU n 1 163 THR n 1 164 ALA n 1 165 PRO n 1 166 ASN n 1 167 TRP n 1 168 PRO n 1 169 SER n 1 170 THR n 1 171 ALA n 1 172 CYS n 1 173 GLY n 1 174 ASN n 1 175 LYS n 1 176 GLY n 1 177 THR n 1 178 ALA n 1 179 PRO n 1 180 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'White-rot fungus' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'egv, PcCel45A' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K-3 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Phanerochaete chrysosporium' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5306 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Pichia pastoris' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain KM71H _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pPICZa _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B3Y002_PHACH _struct_ref.pdbx_db_accession B3Y002 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIV VKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLS GETAPNWPSTACGNKGTAPS ; _struct_ref.pdbx_align_begin 27 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3X2L _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 180 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B3Y002 _struct_ref_seq.db_align_beg 27 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 206 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 180 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 40S non-polymer . 3-methylpentane-1,5-diol ? 'C6 H14 O2' 118.174 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TRS non-polymer . 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 'TRIS BUFFER' 'C4 H12 N O3 1' 122.143 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3X2L _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.28 _exptl_crystal.density_percent_sol 46.11 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'Liquid diffusion under micro gravity' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '60% 3-methyl-1,5-pentanediol, 50mM Tris-HCl, pH 8.0, Liquid diffusion under micro gravity, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 95 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAYONIX MX300HE' _diffrn_detector.pdbx_collection_date 2013-05-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.75 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL44XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL44XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.75 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3X2L _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 0.80 _reflns.number_obs 176380 _reflns.number_all ? _reflns.percent_possible_obs 97.0 _reflns.pdbx_Rmerge_I_obs 0.161 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 0.80 _reflns_shell.d_res_low 0.81 _reflns_shell.percent_possible_all 92.5 _reflns_shell.Rmerge_I_obs 0.402 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.0 _reflns_shell.pdbx_redundancy 4.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3X2L _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 154250 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.52 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.643 _refine.ls_d_res_high 0.830 _refine.ls_percent_reflns_obs 98.30 _refine.ls_R_factor_obs 0.1156 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1151 _refine.ls_R_factor_R_free 0.1248 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.03 _refine.ls_number_reflns_R_free 7753 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.04 _refine.pdbx_overall_phase_error 8.83 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1273 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 214 _refine_hist.number_atoms_total 1527 _refine_hist.d_res_high 0.830 _refine_hist.d_res_low 27.643 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.007 ? ? 1508 'X-RAY DIFFRACTION' ? f_angle_d 1.303 ? ? 2061 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 17.045 ? ? 528 'X-RAY DIFFRACTION' ? f_chiral_restr 0.091 ? ? 206 'X-RAY DIFFRACTION' ? f_plane_restr 0.008 ? ? 287 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 0.8304 0.8398 4586 0.1913 94.00 0.2099 . . 255 . . . . 'X-RAY DIFFRACTION' . 0.8398 0.8497 4667 0.1769 95.00 0.1756 . . 253 . . . . 'X-RAY DIFFRACTION' . 0.8497 0.8600 4744 0.1637 96.00 0.1502 . . 217 . . . . 'X-RAY DIFFRACTION' . 0.8600 0.8709 4707 0.1543 96.00 0.1400 . . 283 . . . . 'X-RAY DIFFRACTION' . 0.8709 0.8824 4738 0.1481 97.00 0.1611 . . 262 . . . . 'X-RAY DIFFRACTION' . 0.8824 0.8945 4746 0.1388 97.00 0.1561 . . 230 . . . . 'X-RAY DIFFRACTION' . 0.8945 0.9073 4784 0.1301 97.00 0.1274 . . 254 . . . . 'X-RAY DIFFRACTION' . 0.9073 0.9208 4794 0.1215 97.00 0.1404 . . 263 . . . . 'X-RAY DIFFRACTION' . 0.9208 0.9352 4812 0.1141 98.00 0.1315 . . 273 . . . . 'X-RAY DIFFRACTION' . 0.9352 0.9505 4860 0.1075 98.00 0.1163 . . 227 . . . . 'X-RAY DIFFRACTION' . 0.9505 0.9669 4840 0.1017 98.00 0.1154 . . 249 . . . . 'X-RAY DIFFRACTION' . 0.9669 0.9845 4884 0.0977 99.00 0.0979 . . 257 . . . . 'X-RAY DIFFRACTION' . 0.9845 1.0034 4803 0.0938 99.00 0.1007 . . 270 . . . . 'X-RAY DIFFRACTION' . 1.0034 1.0239 4894 0.0887 99.00 0.1044 . . 280 . . . . 'X-RAY DIFFRACTION' . 1.0239 1.0462 4857 0.0867 99.00 0.0967 . . 263 . . . . 'X-RAY DIFFRACTION' . 1.0462 1.0705 4906 0.0835 99.00 0.0925 . . 230 . . . . 'X-RAY DIFFRACTION' . 1.0705 1.0973 4961 0.0822 99.00 0.0804 . . 257 . . . . 'X-RAY DIFFRACTION' . 1.0973 1.1270 4886 0.0806 99.00 0.0865 . . 278 . . . . 'X-RAY DIFFRACTION' . 1.1270 1.1601 4901 0.0811 99.00 0.0892 . . 265 . . . . 'X-RAY DIFFRACTION' . 1.1601 1.1976 4913 0.0836 99.00 0.0944 . . 269 . . . . 'X-RAY DIFFRACTION' . 1.1976 1.2404 4961 0.0898 100.00 0.0860 . . 248 . . . . 'X-RAY DIFFRACTION' . 1.2404 1.2900 4976 0.0955 99.00 0.1066 . . 242 . . . . 'X-RAY DIFFRACTION' . 1.2900 1.3487 4938 0.1052 99.00 0.1054 . . 262 . . . . 'X-RAY DIFFRACTION' . 1.3487 1.4199 4960 0.1084 99.00 0.1108 . . 269 . . . . 'X-RAY DIFFRACTION' . 1.4199 1.5088 4924 0.1094 99.00 0.1103 . . 280 . . . . 'X-RAY DIFFRACTION' . 1.5088 1.6253 5008 0.1096 100.00 0.1145 . . 258 . . . . 'X-RAY DIFFRACTION' . 1.6253 1.7888 4984 0.1126 99.00 0.1336 . . 260 . . . . 'X-RAY DIFFRACTION' . 1.7888 2.0476 5074 0.1225 100.00 0.1455 . . 264 . . . . 'X-RAY DIFFRACTION' . 2.0476 2.5795 5094 0.1285 100.00 0.1455 . . 262 . . . . 'X-RAY DIFFRACTION' . 2.5795 27.6588 5295 0.1411 100.00 0.1530 . . 273 . . . . # _struct.entry_id 3X2L _struct.title 'X-ray structure of PcCel45A apo form at 95K.' _struct.pdbx_descriptor 'Endoglucanase V-like protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3X2L _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text Hydrolase # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 1 ? TYR A 5 ? ALA A 1 TYR A 5 5 ? 5 HELX_P HELX_P2 2 GLN A 39 ? GLY A 43 ? GLN A 39 GLY A 43 1 ? 5 HELX_P HELX_P3 3 ASN A 92 ? GLY A 97 ? ASN A 92 GLY A 97 1 ? 6 HELX_P HELX_P4 4 GLY A 120 ? PHE A 126 ? GLY A 120 PHE A 126 1 ? 7 HELX_P HELX_P5 5 SER A 141 ? TRP A 145 ? SER A 141 TRP A 145 5 ? 5 HELX_P HELX_P6 6 LEU A 159 ? ALA A 164 ? LEU A 159 ALA A 164 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 21 SG ? ? ? 1_555 A CYS 116 SG ? ? A CYS 21 A CYS 116 1_555 ? ? ? ? ? ? ? 2.060 ? disulf2 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 54 SG ? ? A CYS 26 A CYS 54 1_555 ? ? ? ? ? ? ? 2.042 ? disulf3 disulf ? ? A CYS 57 SG ? ? ? 1_555 A CYS 142 SG ? ? A CYS 57 A CYS 142 1_555 ? ? ? ? ? ? ? 2.066 ? disulf4 disulf ? ? A CYS 87 SG ? ? ? 1_555 A CYS 96 SG ? ? A CYS 87 A CYS 96 1_555 ? ? ? ? ? ? ? 2.065 ? disulf5 disulf ? ? A CYS 158 SG ? ? ? 1_555 A CYS 172 SG ? ? A CYS 158 A CYS 172 1_555 ? ? ? ? ? ? ? 2.073 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 73 A . ? GLY 73 A PRO 74 A ? PRO 74 A 1 4.93 2 TRP 167 A . ? TRP 167 A PRO 168 A ? PRO 168 A 1 4.39 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 10 ? TYR A 18 ? THR A 10 TYR A 18 A 2 PHE A 111 ? CYS A 116 ? PHE A 111 CYS A 116 A 3 THR A 34 ? ASN A 38 ? THR A 34 ASN A 38 A 4 ILE A 79 ? CYS A 87 ? ILE A 79 CYS A 87 A 5 CYS A 57 ? HIS A 64 ? CYS A 57 HIS A 64 A 6 LEU A 133 ? VAL A 140 ? LEU A 133 VAL A 140 A 7 THR A 10 ? TYR A 18 ? THR A 10 TYR A 18 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 16 ? N THR A 16 O ILE A 115 ? O ILE A 115 A 2 3 O CYS A 116 ? O CYS A 116 N THR A 34 ? N THR A 34 A 3 4 N ILE A 37 ? N ILE A 37 O CYS A 87 ? O CYS A 87 A 4 5 O ILE A 79 ? O ILE A 79 N LEU A 60 ? N LEU A 60 A 5 6 N ALA A 59 ? N ALA A 59 O THR A 138 ? O THR A 138 A 6 7 O LEU A 133 ? O LEU A 133 N PHE A 15 ? N PHE A 15 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE 40S A 201' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE 40S A 202' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE 40S A 203' AC4 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE 40S A 204' AC5 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE TRS A 205' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 ALA A 29 ? ALA A 29 . ? 1_555 ? 2 AC1 8 ALA A 30 ? ALA A 30 . ? 1_555 ? 3 AC1 8 SER A 31 ? SER A 31 . ? 1_555 ? 4 AC1 8 THR A 138 ? THR A 138 . ? 4_545 ? 5 AC1 8 HOH G . ? HOH A 358 . ? 1_555 ? 6 AC1 8 HOH G . ? HOH A 376 . ? 1_555 ? 7 AC1 8 HOH G . ? HOH A 400 . ? 1_555 ? 8 AC1 8 HOH G . ? HOH A 445 . ? 4_545 ? 9 AC2 6 LEU A 48 ? LEU A 48 . ? 1_555 ? 10 AC2 6 GLY A 176 ? GLY A 176 . ? 1_555 ? 11 AC2 6 THR A 177 ? THR A 177 . ? 1_555 ? 12 AC2 6 HOH G . ? HOH A 424 . ? 1_555 ? 13 AC2 6 HOH G . ? HOH A 462 . ? 1_555 ? 14 AC2 6 HOH G . ? HOH A 470 . ? 1_555 ? 15 AC3 5 ASN A 70 ? ASN A 70 . ? 2_545 ? 16 AC3 5 SER A 146 ? SER A 146 . ? 1_555 ? 17 AC3 5 HOH G . ? HOH A 312 . ? 4_545 ? 18 AC3 5 HOH G . ? HOH A 328 . ? 2_545 ? 19 AC3 5 HOH G . ? HOH A 365 . ? 1_555 ? 20 AC4 7 PHE A 75 ? PHE A 75 . ? 1_555 ? 21 AC4 7 GLN A 77 ? GLN A 77 . ? 1_555 ? 22 AC4 7 ALA A 123 ? ALA A 123 . ? 1_555 ? 23 AC4 7 LYS A 124 ? LYS A 124 . ? 1_555 ? 24 AC4 7 PHE A 126 ? PHE A 126 . ? 1_555 ? 25 AC4 7 HOH G . ? HOH A 332 . ? 1_555 ? 26 AC4 7 HOH G . ? HOH A 480 . ? 1_555 ? 27 AC5 7 TYR A 18 ? TYR A 18 . ? 1_555 ? 28 AC5 7 ASN A 92 ? ASN A 92 . ? 1_555 ? 29 AC5 7 PHE A 95 ? PHE A 95 . ? 1_555 ? 30 AC5 7 ASP A 114 ? ASP A 114 . ? 1_555 ? 31 AC5 7 HOH G . ? HOH A 403 . ? 1_555 ? 32 AC5 7 HOH G . ? HOH A 437 . ? 1_555 ? 33 AC5 7 HOH G . ? HOH A 506 . ? 1_555 ? # _database_PDB_matrix.entry_id 3X2L _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3X2L _atom_sites.fract_transf_matrix[1][1] 0.022002 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017216 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015908 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 TYR 5 5 5 TYR TYR A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 MET 17 17 17 MET MET A . n A 1 18 TYR 18 18 18 TYR TYR A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 CYS 21 21 21 CYS CYS A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 PRO 24 24 24 PRO PRO A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 CYS 26 26 26 CYS CYS A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 CYS 54 54 54 CYS CYS A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 CYS 57 57 57 CYS CYS A . n A 1 58 PHE 58 58 58 PHE PHE A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 HIS 64 64 64 HIS HIS A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 TYR 67 67 67 TYR TYR A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 TYR 71 71 71 TYR TYR A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 PHE 75 75 75 PHE PHE A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 GLN 77 77 77 GLN GLN A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 THR 84 84 84 THR THR A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 CYS 87 87 87 CYS CYS A . n A 1 88 PRO 88 88 88 PRO PRO A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 ASN 92 92 92 ASN ASN A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 CYS 96 96 96 CYS CYS A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 GLN 98 98 98 GLN GLN A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 ASN 102 102 102 ASN ASN A . n A 1 103 PRO 103 103 103 PRO PRO A . n A 1 104 THR 104 104 104 THR THR A . n A 1 105 ASN 105 105 105 ASN ASN A . n A 1 106 GLN 106 106 106 GLN GLN A . n A 1 107 HIS 107 107 107 HIS HIS A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 MET 109 109 109 MET MET A . n A 1 110 PRO 110 110 110 PRO PRO A . n A 1 111 PHE 111 111 111 PHE PHE A . n A 1 112 HIS 112 112 112 HIS HIS A . n A 1 113 PHE 113 113 113 PHE PHE A . n A 1 114 ASP 114 114 114 ASP ASP A . n A 1 115 ILE 115 115 115 ILE ILE A . n A 1 116 CYS 116 116 116 CYS CYS A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 ASP 118 118 118 ASP ASP A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 LYS 124 124 124 LYS LYS A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 PHE 126 126 126 PHE PHE A . n A 1 127 PRO 127 127 127 PRO PRO A . n A 1 128 SER 128 128 128 SER SER A . n A 1 129 GLY 129 129 129 GLY GLY A . n A 1 130 HIS 130 130 130 HIS HIS A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 THR 134 134 134 THR THR A . n A 1 135 GLY 135 135 135 GLY GLY A . n A 1 136 THR 136 136 136 THR THR A . n A 1 137 PHE 137 137 137 PHE PHE A . n A 1 138 THR 138 138 138 THR THR A . n A 1 139 GLU 139 139 139 GLU GLU A . n A 1 140 VAL 140 140 140 VAL VAL A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 CYS 142 142 142 CYS CYS A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 GLN 144 144 144 GLN GLN A . n A 1 145 TRP 145 145 145 TRP TRP A . n A 1 146 SER 146 146 146 SER SER A . n A 1 147 GLY 147 147 147 GLY GLY A . n A 1 148 SER 148 148 148 SER SER A . n A 1 149 ASP 149 149 149 ASP ASP A . n A 1 150 GLY 150 150 150 GLY GLY A . n A 1 151 GLY 151 151 151 GLY GLY A . n A 1 152 GLN 152 152 152 GLN GLN A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 TRP 154 154 154 TRP TRP A . n A 1 155 ASN 155 155 155 ASN ASN A . n A 1 156 GLY 156 156 156 GLY GLY A . n A 1 157 ALA 157 157 157 ALA ALA A . n A 1 158 CYS 158 158 158 CYS CYS A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 GLY 161 161 161 GLY GLY A . n A 1 162 GLU 162 162 162 GLU GLU A . n A 1 163 THR 163 163 163 THR THR A . n A 1 164 ALA 164 164 164 ALA ALA A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 ASN 166 166 166 ASN ASN A . n A 1 167 TRP 167 167 167 TRP TRP A . n A 1 168 PRO 168 168 168 PRO PRO A . n A 1 169 SER 169 169 169 SER SER A . n A 1 170 THR 170 170 170 THR THR A . n A 1 171 ALA 171 171 171 ALA ALA A . n A 1 172 CYS 172 172 172 CYS CYS A . n A 1 173 GLY 173 173 173 GLY GLY A . n A 1 174 ASN 174 174 174 ASN ASN A . n A 1 175 LYS 175 175 175 LYS LYS A . n A 1 176 GLY 176 176 176 GLY GLY A . n A 1 177 THR 177 177 177 THR THR A . n A 1 178 ALA 178 178 178 ALA ALA A . n A 1 179 PRO 179 179 179 PRO PRO A . n A 1 180 SER 180 180 180 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 40S 1 201 201 40S 40S A . C 2 40S 1 202 202 40S 40S A . D 2 40S 1 203 203 40S 40S A . E 2 40S 1 204 204 40S 40S A . F 3 TRS 1 205 205 TRS TRS A . G 4 HOH 1 301 301 HOH HOH A . G 4 HOH 2 302 302 HOH HOH A . G 4 HOH 3 303 303 HOH HOH A . G 4 HOH 4 304 304 HOH HOH A . G 4 HOH 5 305 305 HOH HOH A . G 4 HOH 6 306 306 HOH HOH A . G 4 HOH 7 307 307 HOH HOH A . G 4 HOH 8 308 308 HOH HOH A . G 4 HOH 9 309 309 HOH HOH A . G 4 HOH 10 310 310 HOH HOH A . G 4 HOH 11 311 311 HOH HOH A . G 4 HOH 12 312 312 HOH HOH A . G 4 HOH 13 313 313 HOH HOH A . G 4 HOH 14 314 314 HOH HOH A . G 4 HOH 15 315 315 HOH HOH A . G 4 HOH 16 316 316 HOH HOH A . G 4 HOH 17 317 317 HOH HOH A . G 4 HOH 18 318 318 HOH HOH A . G 4 HOH 19 319 319 HOH HOH A . G 4 HOH 20 320 320 HOH HOH A . G 4 HOH 21 321 321 HOH HOH A . G 4 HOH 22 322 322 HOH HOH A . G 4 HOH 23 323 323 HOH HOH A . G 4 HOH 24 324 324 HOH HOH A . G 4 HOH 25 325 325 HOH HOH A . G 4 HOH 26 326 326 HOH HOH A . G 4 HOH 27 327 327 HOH HOH A . G 4 HOH 28 328 328 HOH HOH A . G 4 HOH 29 329 329 HOH HOH A . G 4 HOH 30 330 330 HOH HOH A . G 4 HOH 31 331 331 HOH HOH A . G 4 HOH 32 332 332 HOH HOH A . G 4 HOH 33 333 333 HOH HOH A . G 4 HOH 34 334 334 HOH HOH A . G 4 HOH 35 335 335 HOH HOH A . G 4 HOH 36 336 336 HOH HOH A . G 4 HOH 37 337 337 HOH HOH A . G 4 HOH 38 338 338 HOH HOH A . G 4 HOH 39 339 339 HOH HOH A . G 4 HOH 40 340 340 HOH HOH A . G 4 HOH 41 341 341 HOH HOH A . G 4 HOH 42 342 342 HOH HOH A . G 4 HOH 43 343 343 HOH HOH A . G 4 HOH 44 344 344 HOH HOH A . G 4 HOH 45 345 345 HOH HOH A . G 4 HOH 46 346 346 HOH HOH A . G 4 HOH 47 347 347 HOH HOH A . G 4 HOH 48 348 348 HOH HOH A . G 4 HOH 49 349 349 HOH HOH A . G 4 HOH 50 350 350 HOH HOH A . G 4 HOH 51 351 351 HOH HOH A . G 4 HOH 52 352 352 HOH HOH A . G 4 HOH 53 353 353 HOH HOH A . G 4 HOH 54 354 354 HOH HOH A . G 4 HOH 55 355 355 HOH HOH A . G 4 HOH 56 356 356 HOH HOH A . G 4 HOH 57 357 357 HOH HOH A . G 4 HOH 58 358 358 HOH HOH A . G 4 HOH 59 359 359 HOH HOH A . G 4 HOH 60 360 360 HOH HOH A . G 4 HOH 61 361 361 HOH HOH A . G 4 HOH 62 362 362 HOH HOH A . G 4 HOH 63 363 363 HOH HOH A . G 4 HOH 64 364 364 HOH HOH A . G 4 HOH 65 365 365 HOH HOH A . G 4 HOH 66 366 366 HOH HOH A . G 4 HOH 67 367 367 HOH HOH A . G 4 HOH 68 368 368 HOH HOH A . G 4 HOH 69 369 369 HOH HOH A . G 4 HOH 70 370 370 HOH HOH A . G 4 HOH 71 371 371 HOH HOH A . G 4 HOH 72 372 372 HOH HOH A . G 4 HOH 73 373 373 HOH HOH A . G 4 HOH 74 374 374 HOH HOH A . G 4 HOH 75 375 375 HOH HOH A . G 4 HOH 76 376 376 HOH HOH A . G 4 HOH 77 377 377 HOH HOH A . G 4 HOH 78 378 378 HOH HOH A . G 4 HOH 79 379 379 HOH HOH A . G 4 HOH 80 380 380 HOH HOH A . G 4 HOH 81 381 381 HOH HOH A . G 4 HOH 82 382 382 HOH HOH A . G 4 HOH 83 383 383 HOH HOH A . G 4 HOH 84 384 384 HOH HOH A . G 4 HOH 85 385 385 HOH HOH A . G 4 HOH 86 386 386 HOH HOH A . G 4 HOH 87 387 387 HOH HOH A . G 4 HOH 88 388 388 HOH HOH A . G 4 HOH 89 389 389 HOH HOH A . G 4 HOH 90 390 390 HOH HOH A . G 4 HOH 91 391 391 HOH HOH A . G 4 HOH 92 392 392 HOH HOH A . G 4 HOH 93 393 393 HOH HOH A . G 4 HOH 94 394 394 HOH HOH A . G 4 HOH 95 395 395 HOH HOH A . G 4 HOH 96 396 396 HOH HOH A . G 4 HOH 97 397 397 HOH HOH A . G 4 HOH 98 398 398 HOH HOH A . G 4 HOH 99 399 399 HOH HOH A . G 4 HOH 100 400 400 HOH HOH A . G 4 HOH 101 401 401 HOH HOH A . G 4 HOH 102 402 402 HOH HOH A . G 4 HOH 103 403 403 HOH HOH A . G 4 HOH 104 404 404 HOH HOH A . G 4 HOH 105 405 405 HOH HOH A . G 4 HOH 106 406 406 HOH HOH A . G 4 HOH 107 407 407 HOH HOH A . G 4 HOH 108 408 408 HOH HOH A . G 4 HOH 109 409 409 HOH HOH A . G 4 HOH 110 410 410 HOH HOH A . G 4 HOH 111 411 411 HOH HOH A . G 4 HOH 112 412 412 HOH HOH A . G 4 HOH 113 413 413 HOH HOH A . G 4 HOH 114 414 414 HOH HOH A . G 4 HOH 115 415 415 HOH HOH A . G 4 HOH 116 416 416 HOH HOH A . G 4 HOH 117 417 417 HOH HOH A . G 4 HOH 118 418 418 HOH HOH A . G 4 HOH 119 419 419 HOH HOH A . G 4 HOH 120 420 420 HOH HOH A . G 4 HOH 121 421 421 HOH HOH A . G 4 HOH 122 422 422 HOH HOH A . G 4 HOH 123 423 423 HOH HOH A . G 4 HOH 124 424 424 HOH HOH A . G 4 HOH 125 425 425 HOH HOH A . G 4 HOH 126 426 426 HOH HOH A . G 4 HOH 127 427 427 HOH HOH A . G 4 HOH 128 428 428 HOH HOH A . G 4 HOH 129 429 429 HOH HOH A . G 4 HOH 130 430 430 HOH HOH A . G 4 HOH 131 431 431 HOH HOH A . G 4 HOH 132 432 432 HOH HOH A . G 4 HOH 133 433 433 HOH HOH A . G 4 HOH 134 434 434 HOH HOH A . G 4 HOH 135 435 435 HOH HOH A . G 4 HOH 136 436 436 HOH HOH A . G 4 HOH 137 437 437 HOH HOH A . G 4 HOH 138 438 438 HOH HOH A . G 4 HOH 139 439 439 HOH HOH A . G 4 HOH 140 440 440 HOH HOH A . G 4 HOH 141 441 441 HOH HOH A . G 4 HOH 142 442 442 HOH HOH A . G 4 HOH 143 443 443 HOH HOH A . G 4 HOH 144 444 444 HOH HOH A . G 4 HOH 145 445 445 HOH HOH A . G 4 HOH 146 446 446 HOH HOH A . G 4 HOH 147 447 447 HOH HOH A . G 4 HOH 148 448 448 HOH HOH A . G 4 HOH 149 449 449 HOH HOH A . G 4 HOH 150 450 450 HOH HOH A . G 4 HOH 151 451 451 HOH HOH A . G 4 HOH 152 452 452 HOH HOH A . G 4 HOH 153 453 453 HOH HOH A . G 4 HOH 154 454 454 HOH HOH A . G 4 HOH 155 455 455 HOH HOH A . G 4 HOH 156 456 456 HOH HOH A . G 4 HOH 157 457 457 HOH HOH A . G 4 HOH 158 458 458 HOH HOH A . G 4 HOH 159 459 459 HOH HOH A . G 4 HOH 160 460 460 HOH HOH A . G 4 HOH 161 461 461 HOH HOH A . G 4 HOH 162 462 462 HOH HOH A . G 4 HOH 163 463 463 HOH HOH A . G 4 HOH 164 464 464 HOH HOH A . G 4 HOH 165 465 465 HOH HOH A . G 4 HOH 166 466 466 HOH HOH A . G 4 HOH 167 467 467 HOH HOH A . G 4 HOH 168 468 468 HOH HOH A . G 4 HOH 169 469 469 HOH HOH A . G 4 HOH 170 470 470 HOH HOH A . G 4 HOH 171 471 471 HOH HOH A . G 4 HOH 172 472 472 HOH HOH A . G 4 HOH 173 473 473 HOH HOH A . G 4 HOH 174 474 474 HOH HOH A . G 4 HOH 175 475 475 HOH HOH A . G 4 HOH 176 476 476 HOH HOH A . G 4 HOH 177 477 477 HOH HOH A . G 4 HOH 178 478 478 HOH HOH A . G 4 HOH 179 479 479 HOH HOH A . G 4 HOH 180 480 480 HOH HOH A . G 4 HOH 181 481 481 HOH HOH A . G 4 HOH 182 482 482 HOH HOH A . G 4 HOH 183 483 483 HOH HOH A . G 4 HOH 184 484 484 HOH HOH A . G 4 HOH 185 485 485 HOH HOH A . G 4 HOH 186 486 486 HOH HOH A . G 4 HOH 187 487 487 HOH HOH A . G 4 HOH 188 488 488 HOH HOH A . G 4 HOH 189 489 489 HOH HOH A . G 4 HOH 190 490 490 HOH HOH A . G 4 HOH 191 491 491 HOH HOH A . G 4 HOH 192 492 492 HOH HOH A . G 4 HOH 193 493 493 HOH HOH A . G 4 HOH 194 494 494 HOH HOH A . G 4 HOH 195 495 495 HOH HOH A . G 4 HOH 196 496 496 HOH HOH A . G 4 HOH 197 497 497 HOH HOH A . G 4 HOH 198 498 498 HOH HOH A . G 4 HOH 199 499 499 HOH HOH A . G 4 HOH 200 500 500 HOH HOH A . G 4 HOH 201 501 501 HOH HOH A . G 4 HOH 202 502 502 HOH HOH A . G 4 HOH 203 503 503 HOH HOH A . G 4 HOH 204 504 504 HOH HOH A . G 4 HOH 205 505 505 HOH HOH A . G 4 HOH 206 506 506 HOH HOH A . G 4 HOH 207 507 507 HOH HOH A . G 4 HOH 208 508 508 HOH HOH A . G 4 HOH 209 509 509 HOH HOH A . G 4 HOH 210 510 510 HOH HOH A . G 4 HOH 211 511 511 HOH HOH A . G 4 HOH 212 512 512 HOH HOH A . G 4 HOH 213 513 513 HOH HOH A . G 4 HOH 214 514 514 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-10-14 2 'Structure model' 1 1 2015-11-04 3 'Structure model' 1 2 2015-12-30 4 'Structure model' 1 3 2019-12-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 3 'Structure model' 'Experimental preparation' 3 4 'Structure model' 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_abbrev' 2 4 'Structure model' '_citation.pdbx_database_id_PubMed' 3 4 'Structure model' '_citation.title' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.9_1692)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 63 ? ? -143.09 10.94 2 1 ASN A 92 ? ? -140.89 51.04 3 1 ALA A 171 ? ? -127.99 -91.09 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 3-methylpentane-1,5-diol 40S 3 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRS 4 water HOH #