HEADER TRANSFERASE 08-NOV-12 3ZBF TITLE STRUCTURE OF HUMAN ROS1 KINASE DOMAIN IN COMPLEX WITH CRIZOTINIB COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTO-ONCOGENE TYROSINE-PROTEIN KINASE ROS; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 1934-2232; COMPND 5 SYNONYM: PROTO-ONCOGENE C-ROS, PROTO-ONCOGENE C-ROS-1, RECEPTOR COMPND 6 TYROSINE KINASE C-ROS ONCOGENE 1, C-ROS RECEPTOR TYROSINE KINASE; COMPND 7 EC: 2.7.10.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: SF21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PFASTBAC KEYWDS TRANSFERASE, TYROSINE KINASE EXPDTA X-RAY DIFFRACTION AUTHOR M.MCTIGUE,Y.DENG,W.LIU,A.BROOUN,A.STEWART REVDAT 5 20-DEC-23 3ZBF 1 REMARK REVDAT 4 08-MAY-19 3ZBF 1 REMARK REVDAT 3 24-APR-19 3ZBF 1 SOURCE REVDAT 2 03-JUL-13 3ZBF 1 JRNL REVDAT 1 12-JUN-13 3ZBF 0 JRNL AUTH M.M.AWAD,R.KATAYAMA,M.MCTIGUE,W.LIU,Y.DENG,A.BROOUN, JRNL AUTH 2 L.FRIBOULET,D.HUANG,M.D.FALK,S.TIMOFEEVSKI,K.D.WILNER, JRNL AUTH 3 E.L.LOCKERMAN,T.M.KHAN,S.MAHMOOD,J.F.GAINOR,S.R.DIGUMARTHY, JRNL AUTH 4 J.R.STONE,M.MINO-KENUDSON,J.G.CHRISTENSEN,J.IAFRATE, JRNL AUTH 5 J.A.ENGELMAN,A.T.SHAW JRNL TITL ACQUIRED RESISTANCE TO CRIZOTINIB FROM A MUTATION IN JRNL TITL 2 CD74-ROS1 JRNL REF N.ENGL.J.MED. V. 368 2395 2013 JRNL REFN ISSN 0028-4793 JRNL PMID 23724914 JRNL DOI 10.1056/NEJMOA1215530 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNX 2005 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN,ACCELRYS REMARK 3 : SOFTWARE INC.(BADGER,BERARD,KUMAR,SZALMA, REMARK 3 : YIP,DZAKULA) REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 328539.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 16486 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.236 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 796 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.010 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.2360 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.2330 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 816 REMARK 3 ESTIMATED ERROR OF FREE R VALUE (NO CUTOFF) : 0.0100 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 16863 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.34 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2480 REMARK 3 BIN R VALUE (WORKING SET) : 0.2730 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 126 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2260 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 137 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.63000 REMARK 3 B22 (A**2) : -1.63000 REMARK 3 B33 (A**2) : 3.26000 REMARK 3 B12 (A**2) : 2.53000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM SIGMAA (A) : 0.24 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.42 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.35 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 0.900 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.670 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.630 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.660 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.240 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.220 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 77.91 REMARK 3 REMARK 3 NCS MODEL : NONE REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : UNL.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : UNL.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3ZBF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1290054757. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 87 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18796 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.120 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.880 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.12 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 0.59000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNX REMARK 200 STARTING MODEL: PDB ENTRY 2XP2 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS WERE OBTAINED BY THE HANGING REMARK 280 DROP VAPOR DIFFUSION METHOD AT 13 DEGREES C BY MIXING 1.5 REMARK 280 MICROLITERS OF SOLUTION CONTAINING A 1:3 MOLAR RATIO OF REMARK 280 PHOSPHORYLATED ROS1 KD (12.2MG/ML) TO CRIZOTINIB AND 1.5 REMARK 280 MICROLITERS OF RESERVOIR SOLUTION CONTAINING 25% (W/V) PEG 3350, REMARK 280 0.6M POTASSIUM THIOCYANATE AND 0.1M SODIUM CITRATE TRIBASIC REMARK 280 DIHYDRATE, PH5.6. CRYSTALS WERE FLASH-FROZEN IN LIQUID NITROGEN REMARK 280 AFTER TRANSFER TO 2 MICROLITERS OF RESERVOIR SOLUTION CONTAINING REMARK 280 25% (V/V) GLYCEROL AS A CRYOPROTECTANT., VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 286K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 16.78567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.57133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 16.78567 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 33.57133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1911 REMARK 465 ALA A 1912 REMARK 465 HIS A 1913 REMARK 465 HIS A 1914 REMARK 465 HIS A 1915 REMARK 465 HIS A 1916 REMARK 465 HIS A 1917 REMARK 465 HIS A 1918 REMARK 465 ASP A 1919 REMARK 465 TYR A 1920 REMARK 465 GLY A 1921 REMARK 465 ILE A 1922 REMARK 465 PRO A 1923 REMARK 465 THR A 1924 REMARK 465 THR A 1925 REMARK 465 GLU A 1926 REMARK 465 ASN A 1927 REMARK 465 LEU A 1928 REMARK 465 TYR A 1929 REMARK 465 PHE A 1930 REMARK 465 GLN A 1931 REMARK 465 GLY A 1932 REMARK 465 SER A 1933 REMARK 465 GLY A 1954 REMARK 465 ALA A 1955 REMARK 465 PHE A 1956 REMARK 465 LYS A 2111 REMARK 465 ASN A 2112 REMARK 465 ASP A 2113 REMARK 465 TYR A 2114 REMARK 465 TYR A 2115 REMARK 465 ARG A 2116 REMARK 465 LYS A 2117 REMARK 465 ARG A 2118 REMARK 465 GLY A 2119 REMARK 465 GLU A 2120 REMARK 465 GLY A 2121 REMARK 465 LEU A 2122 REMARK 465 ASP A 2231 REMARK 465 GLU A 2232 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A2230 CA C O CB CG CD NE REMARK 470 ARG A2230 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A1948 -83.67 -146.77 REMARK 500 GLU A1958 117.18 164.99 REMARK 500 ASP A1966 72.87 51.22 REMARK 500 ASP A2079 32.67 -160.65 REMARK 500 ALA A2081 145.69 176.58 REMARK 500 THR A2176 -12.81 -48.95 REMARK 500 LYS A2228 52.89 -101.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A3008 DISTANCE = 6.29 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VGH A 3000 DBREF 3ZBF A 1934 2232 UNP P08922 ROS1_HUMAN 1934 2232 SEQADV 3ZBF MET A 1911 UNP P08922 EXPRESSION TAG SEQADV 3ZBF ALA A 1912 UNP P08922 EXPRESSION TAG SEQADV 3ZBF HIS A 1913 UNP P08922 EXPRESSION TAG SEQADV 3ZBF HIS A 1914 UNP P08922 EXPRESSION TAG SEQADV 3ZBF HIS A 1915 UNP P08922 EXPRESSION TAG SEQADV 3ZBF HIS A 1916 UNP P08922 EXPRESSION TAG SEQADV 3ZBF HIS A 1917 UNP P08922 EXPRESSION TAG SEQADV 3ZBF HIS A 1918 UNP P08922 EXPRESSION TAG SEQADV 3ZBF ASP A 1919 UNP P08922 EXPRESSION TAG SEQADV 3ZBF TYR A 1920 UNP P08922 EXPRESSION TAG SEQADV 3ZBF GLY A 1921 UNP P08922 EXPRESSION TAG SEQADV 3ZBF ILE A 1922 UNP P08922 EXPRESSION TAG SEQADV 3ZBF PRO A 1923 UNP P08922 EXPRESSION TAG SEQADV 3ZBF THR A 1924 UNP P08922 EXPRESSION TAG SEQADV 3ZBF THR A 1925 UNP P08922 EXPRESSION TAG SEQADV 3ZBF GLU A 1926 UNP P08922 EXPRESSION TAG SEQADV 3ZBF ASN A 1927 UNP P08922 EXPRESSION TAG SEQADV 3ZBF LEU A 1928 UNP P08922 EXPRESSION TAG SEQADV 3ZBF TYR A 1929 UNP P08922 EXPRESSION TAG SEQADV 3ZBF PHE A 1930 UNP P08922 EXPRESSION TAG SEQADV 3ZBF GLN A 1931 UNP P08922 EXPRESSION TAG SEQADV 3ZBF GLY A 1932 UNP P08922 EXPRESSION TAG SEQADV 3ZBF SER A 1933 UNP P08922 EXPRESSION TAG SEQRES 1 A 322 MET ALA HIS HIS HIS HIS HIS HIS ASP TYR GLY ILE PRO SEQRES 2 A 322 THR THR GLU ASN LEU TYR PHE GLN GLY SER ILE GLU ASN SEQRES 3 A 322 LEU PRO ALA PHE PRO ARG GLU LYS LEU THR LEU ARG LEU SEQRES 4 A 322 LEU LEU GLY SER GLY ALA PHE GLY GLU VAL TYR GLU GLY SEQRES 5 A 322 THR ALA VAL ASP ILE LEU GLY VAL GLY SER GLY GLU ILE SEQRES 6 A 322 LYS VAL ALA VAL LYS THR LEU LYS LYS GLY SER THR ASP SEQRES 7 A 322 GLN GLU LYS ILE GLU PHE LEU LYS GLU ALA HIS LEU MET SEQRES 8 A 322 SER LYS PHE ASN HIS PRO ASN ILE LEU LYS GLN LEU GLY SEQRES 9 A 322 VAL CYS LEU LEU ASN GLU PRO GLN TYR ILE ILE LEU GLU SEQRES 10 A 322 LEU MET GLU GLY GLY ASP LEU LEU THR TYR LEU ARG LYS SEQRES 11 A 322 ALA ARG MET ALA THR PHE TYR GLY PRO LEU LEU THR LEU SEQRES 12 A 322 VAL ASP LEU VAL ASP LEU CYS VAL ASP ILE SER LYS GLY SEQRES 13 A 322 CYS VAL TYR LEU GLU ARG MET HIS PHE ILE HIS ARG ASP SEQRES 14 A 322 LEU ALA ALA ARG ASN CYS LEU VAL SER VAL LYS ASP TYR SEQRES 15 A 322 THR SER PRO ARG ILE VAL LYS ILE GLY ASP PHE GLY LEU SEQRES 16 A 322 ALA ARG ASP ILE TYR LYS ASN ASP TYR TYR ARG LYS ARG SEQRES 17 A 322 GLY GLU GLY LEU LEU PRO VAL ARG TRP MET ALA PRO GLU SEQRES 18 A 322 SER LEU MET ASP GLY ILE PHE THR THR GLN SER ASP VAL SEQRES 19 A 322 TRP SER PHE GLY ILE LEU ILE TRP GLU ILE LEU THR LEU SEQRES 20 A 322 GLY HIS GLN PRO TYR PRO ALA HIS SER ASN LEU ASP VAL SEQRES 21 A 322 LEU ASN TYR VAL GLN THR GLY GLY ARG LEU GLU PRO PRO SEQRES 22 A 322 ARG ASN CYS PRO ASP ASP LEU TRP ASN LEU MET THR GLN SEQRES 23 A 322 CYS TRP ALA GLN GLU PRO ASP GLN ARG PRO THR PHE HIS SEQRES 24 A 322 ARG ILE GLN ASP GLN LEU GLN LEU PHE ARG ASN PHE PHE SEQRES 25 A 322 LEU ASN SER ILE TYR LYS SER ARG ASP GLU HET VGH A3000 30 HETNAM VGH 3-[(1R)-1-(2,6-DICHLORO-3-FLUOROPHENYL)ETHOXY]-5-(1- HETNAM 2 VGH PIPERIDIN-4-YL-1H-PYRAZOL-4-YL)PYRIDIN-2-AMINE HETSYN VGH CRIZOTINIB FORMUL 2 VGH C21 H22 CL2 F N5 O FORMUL 3 HOH *137(H2 O) HELIX 1 1 PRO A 1941 GLU A 1943 5 3 HELIX 2 2 THR A 1987 LYS A 2003 1 17 HELIX 3 3 ASP A 2033 ALA A 2044 1 12 HELIX 4 4 THR A 2052 MET A 2073 1 22 HELIX 5 5 ALA A 2081 ARG A 2083 5 3 HELIX 6 6 PRO A 2124 MET A 2128 5 5 HELIX 7 7 ALA A 2129 GLY A 2136 1 8 HELIX 8 8 THR A 2139 THR A 2156 1 18 HELIX 9 9 SER A 2166 THR A 2176 1 11 HELIX 10 10 PRO A 2187 TRP A 2198 1 12 HELIX 11 11 GLU A 2201 ARG A 2205 5 5 HELIX 12 12 THR A 2207 LYS A 2228 1 22 SHEET 1 AA 5 LEU A1945 GLY A1952 0 SHEET 2 AA 5 VAL A1959 VAL A1965 -1 O VAL A1959 N LEU A1951 SHEET 3 AA 5 GLU A1974 THR A1981 -1 O ILE A1975 N ALA A1964 SHEET 4 AA 5 TYR A2023 GLU A2027 -1 O ILE A2024 N LYS A1980 SHEET 5 AA 5 GLN A2012 CYS A2016 -1 N LEU A2013 O ILE A2025 SHEET 1 AB 2 PHE A2075 ILE A2076 0 SHEET 2 AB 2 ARG A2107 ASP A2108 -1 O ARG A2107 N ILE A2076 SHEET 1 AC 2 CYS A2085 VAL A2087 0 SHEET 2 AC 2 VAL A2098 ILE A2100 -1 O LYS A2099 N LEU A2086 CISPEP 1 GLU A 2020 PRO A 2021 0 3.11 CISPEP 2 LEU A 2123 PRO A 2124 0 -23.79 SITE 1 AC1 11 ALA A1978 LEU A2010 GLU A2027 MET A2029 SITE 2 AC1 11 GLY A2032 ASP A2033 ARG A2083 ASN A2084 SITE 3 AC1 11 LEU A2086 GLY A2101 ASP A2102 CRYST1 106.854 106.854 50.357 90.00 90.00 120.00 P 64 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009359 0.005403 0.000000 0.00000 SCALE2 0.000000 0.010806 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019858 0.00000 TER 2261 ARG A2230 HETATM 2262 CL VGH A3000 41.460 21.445 3.206 1.00 53.92 CL HETATM 2263 C13 VGH A3000 40.342 20.151 3.469 1.00 51.61 C HETATM 2264 C3 VGH A3000 40.039 19.339 2.333 1.00 51.64 C HETATM 2265 C2 VGH A3000 39.135 18.258 2.432 1.00 51.88 C HETATM 2266 C12 VGH A3000 38.508 17.957 3.669 1.00 53.21 C HETATM 2267 F VGH A3000 37.651 16.922 3.727 1.00 51.93 F HETATM 2268 C17 VGH A3000 39.723 19.875 4.759 1.00 51.22 C HETATM 2269 C18 VGH A3000 38.788 18.748 4.836 1.00 53.17 C HETATM 2270 CL2 VGH A3000 37.960 18.286 6.305 1.00 65.44 CL HETATM 2271 C21 VGH A3000 40.062 20.783 6.011 1.00 47.98 C HETATM 2272 C1 VGH A3000 38.771 21.384 6.608 1.00 44.93 C HETATM 2273 O27 VGH A3000 40.753 20.075 7.125 1.00 42.27 O HETATM 2274 C15 VGH A3000 42.016 19.472 7.031 1.00 38.99 C HETATM 2275 C4 VGH A3000 42.967 19.776 6.004 1.00 40.94 C HETATM 2276 C19 VGH A3000 42.443 18.505 8.006 1.00 37.27 C HETATM 2277 N22 VGH A3000 41.578 18.149 9.061 1.00 36.61 N HETATM 2278 N23 VGH A3000 43.668 17.894 7.986 1.00 37.98 N HETATM 2279 C5 VGH A3000 44.548 18.214 6.979 1.00 40.12 C HETATM 2280 C14 VGH A3000 44.246 19.158 5.951 1.00 40.87 C HETATM 2281 C16 VGH A3000 45.193 19.529 4.829 1.00 44.81 C HETATM 2282 C6 VGH A3000 46.631 19.294 4.693 1.00 45.20 C HETATM 2283 C7 VGH A3000 44.837 20.196 3.675 1.00 48.89 C HETATM 2284 N26 VGH A3000 46.003 20.318 2.954 1.00 52.17 N HETATM 2285 N24 VGH A3000 47.019 19.790 3.561 1.00 48.48 N HETATM 2286 C20 VGH A3000 46.042 20.983 1.634 1.00 57.73 C HETATM 2287 C8 VGH A3000 45.770 19.938 0.518 1.00 60.56 C HETATM 2288 C10 VGH A3000 45.805 20.633 -0.863 1.00 62.17 C HETATM 2289 N25 VGH A3000 47.063 21.404 -1.088 1.00 62.01 N HETATM 2290 C11 VGH A3000 47.361 22.376 0.008 1.00 60.06 C HETATM 2291 C9 VGH A3000 47.391 21.699 1.399 1.00 59.17 C HETATM 2292 O HOH A3001 39.989 18.881 -7.650 1.00 62.30 O HETATM 2293 O HOH A3002 58.793 -2.937 -12.092 1.00 64.81 O HETATM 2294 O HOH A3003 30.748 21.811 -4.069 1.00 63.03 O HETATM 2295 O HOH A3004 45.692 4.773 11.301 1.00 69.19 O HETATM 2296 O HOH A3005 42.209 6.403 -16.347 1.00 42.78 O HETATM 2297 O HOH A3006 33.852 8.430 -20.223 1.00 30.06 O HETATM 2298 O HOH A3007 40.671 -8.714 -15.295 1.00 54.66 O HETATM 2299 O HOH A3008 13.420 10.016 -17.161 1.00 81.43 O HETATM 2300 O HOH A3009 25.277 23.216 25.014 1.00 54.98 O HETATM 2301 O HOH A3010 20.342 22.768 19.126 1.00 67.95 O HETATM 2302 O HOH A3011 30.157 24.869 26.022 1.00 42.99 O HETATM 2303 O HOH A3012 30.635 25.294 23.282 1.00 55.50 O HETATM 2304 O HOH A3013 36.547 21.229 27.944 1.00 56.86 O HETATM 2305 O HOH A3014 35.142 28.167 23.139 1.00 42.09 O HETATM 2306 O HOH A3015 43.539 31.729 19.388 1.00 66.90 O HETATM 2307 O HOH A3016 36.489 31.755 20.803 1.00 61.38 O HETATM 2308 O HOH A3017 42.165 35.360 17.380 1.00 57.57 O HETATM 2309 O HOH A3018 47.771 31.446 22.162 1.00 71.43 O HETATM 2310 O HOH A3019 49.315 32.666 9.493 1.00 58.22 O HETATM 2311 O HOH A3020 43.720 23.584 2.905 1.00 45.50 O HETATM 2312 O HOH A3021 46.590 25.417 -0.814 1.00 71.40 O HETATM 2313 O HOH A3022 48.436 12.303 32.224 1.00 64.15 O HETATM 2314 O HOH A3023 44.996 15.735 15.482 1.00 56.57 O HETATM 2315 O HOH A3024 36.492 41.706 6.366 1.00 67.26 O HETATM 2316 O HOH A3025 23.806 19.985 11.996 1.00 41.23 O HETATM 2317 O HOH A3026 32.062 19.897 7.056 1.00 35.45 O HETATM 2318 O HOH A3027 32.269 13.600 18.113 1.00 67.16 O HETATM 2319 O HOH A3028 25.553 10.355 17.770 1.00 61.52 O HETATM 2320 O HOH A3029 33.535 12.284 14.135 1.00 41.38 O HETATM 2321 O HOH A3030 36.367 9.659 16.310 1.00 46.97 O HETATM 2322 O HOH A3031 34.514 10.056 14.302 1.00 39.88 O HETATM 2323 O HOH A3032 38.098 9.450 13.537 1.00 40.29 O HETATM 2324 O HOH A3033 36.624 6.420 16.290 1.00 41.40 O HETATM 2325 O HOH A3034 37.989 1.355 10.409 1.00 49.31 O HETATM 2326 O HOH A3035 33.161 27.975 21.589 1.00 54.16 O HETATM 2327 O HOH A3036 42.943 33.596 12.859 1.00 62.09 O HETATM 2328 O HOH A3037 54.955 14.228 9.687 1.00 82.79 O HETATM 2329 O HOH A3038 49.478 13.998 12.728 1.00 62.49 O HETATM 2330 O HOH A3039 49.566 14.814 -0.401 1.00 45.84 O HETATM 2331 O HOH A3040 41.219 18.539 -3.888 1.00 51.50 O HETATM 2332 O HOH A3041 40.141 18.991 -1.337 1.00 37.21 O HETATM 2333 O HOH A3042 44.658 17.641 -5.592 1.00 51.50 O HETATM 2334 O HOH A3043 51.517 5.532 3.723 1.00 26.14 O HETATM 2335 O HOH A3044 40.437 17.653 -10.875 1.00 57.36 O HETATM 2336 O HOH A3045 54.583 13.530 -6.961 1.00 47.81 O HETATM 2337 O HOH A3046 54.943 7.641 -8.824 1.00 44.42 O HETATM 2338 O HOH A3047 49.880 9.802 -14.976 1.00 52.48 O HETATM 2339 O HOH A3048 45.184 14.060 -13.458 1.00 52.34 O HETATM 2340 O HOH A3049 49.713 16.368 -8.583 1.00 55.24 O HETATM 2341 O HOH A3050 55.959 9.463 -13.139 1.00 55.46 O HETATM 2342 O HOH A3051 59.384 0.130 -13.677 1.00 50.21 O HETATM 2343 O HOH A3052 56.088 0.610 -9.046 1.00 54.23 O HETATM 2344 O HOH A3053 57.256 2.791 -7.714 1.00 40.39 O HETATM 2345 O HOH A3054 52.953 2.175 -0.679 1.00 30.28 O HETATM 2346 O HOH A3055 48.857 1.039 -8.292 1.00 34.03 O HETATM 2347 O HOH A3056 45.810 2.199 2.202 1.00 26.74 O HETATM 2348 O HOH A3057 52.140 0.504 1.753 1.00 48.45 O HETATM 2349 O HOH A3058 43.946 2.452 4.243 1.00 38.08 O HETATM 2350 O HOH A3059 40.159 -5.141 7.707 1.00 63.90 O HETATM 2351 O HOH A3060 24.433 0.908 7.303 1.00 51.73 O HETATM 2352 O HOH A3061 28.195 6.637 17.052 1.00 55.28 O HETATM 2353 O HOH A3062 23.646 -1.170 3.959 1.00 54.84 O HETATM 2354 O HOH A3063 22.977 1.024 1.588 1.00 46.48 O HETATM 2355 O HOH A3064 26.460 3.259 14.564 1.00 60.85 O HETATM 2356 O HOH A3065 28.502 16.699 2.548 1.00 43.51 O HETATM 2357 O HOH A3066 27.238 11.210 -2.064 1.00 47.20 O HETATM 2358 O HOH A3067 27.731 14.801 -5.939 1.00 52.12 O HETATM 2359 O HOH A3068 25.703 12.675 -4.596 1.00 43.76 O HETATM 2360 O HOH A3069 32.899 19.691 -3.599 1.00 53.47 O HETATM 2361 O HOH A3070 37.378 14.482 -5.904 1.00 34.57 O HETATM 2362 O HOH A3071 33.998 20.133 -7.797 1.00 54.02 O HETATM 2363 O HOH A3072 37.568 16.754 -7.253 1.00 43.80 O HETATM 2364 O HOH A3073 47.822 6.555 9.961 1.00 45.74 O HETATM 2365 O HOH A3074 51.460 12.751 -0.058 1.00 37.40 O HETATM 2366 O HOH A3075 51.441 1.007 4.860 1.00 46.25 O HETATM 2367 O HOH A3076 58.545 6.837 2.630 1.00 48.99 O HETATM 2368 O HOH A3077 48.345 1.292 5.787 1.00 57.44 O HETATM 2369 O HOH A3078 42.101 7.305 13.198 1.00 63.02 O HETATM 2370 O HOH A3079 34.908 19.091 7.528 1.00 54.36 O HETATM 2371 O HOH A3080 23.350 19.971 8.275 1.00 52.95 O HETATM 2372 O HOH A3081 15.916 13.274 12.599 1.00 53.96 O HETATM 2373 O HOH A3082 32.263 18.179 -12.127 1.00 35.14 O HETATM 2374 O HOH A3083 26.913 12.316 -13.433 1.00 48.59 O HETATM 2375 O HOH A3084 28.693 10.277 -12.191 1.00 36.73 O HETATM 2376 O HOH A3085 36.877 16.443 -18.984 1.00 65.08 O HETATM 2377 O HOH A3086 18.306 8.008 -5.896 1.00 70.20 O HETATM 2378 O HOH A3087 12.365 17.329 -12.627 1.00 50.37 O HETATM 2379 O HOH A3088 12.728 13.837 -15.445 1.00 57.37 O HETATM 2380 O HOH A3089 14.768 12.449 -14.191 1.00 70.77 O HETATM 2381 O HOH A3090 11.753 17.522 -9.582 1.00 54.02 O HETATM 2382 O HOH A3091 23.692 11.544 -2.753 1.00 37.03 O HETATM 2383 O HOH A3092 38.856 13.025 -9.716 1.00 37.39 O HETATM 2384 O HOH A3093 46.694 5.266 -13.256 1.00 60.99 O HETATM 2385 O HOH A3094 40.891 8.339 -17.507 1.00 44.81 O HETATM 2386 O HOH A3095 40.578 11.046 -16.377 1.00 44.34 O HETATM 2387 O HOH A3096 47.008 9.802 -17.657 1.00 56.61 O HETATM 2388 O HOH A3097 42.413 13.314 -15.660 1.00 43.81 O HETATM 2389 O HOH A3098 30.146 6.191 -14.948 1.00 49.02 O HETATM 2390 O HOH A3099 35.148 10.099 -20.896 1.00 42.24 O HETATM 2391 O HOH A3100 33.014 8.027 -23.804 1.00 51.51 O HETATM 2392 O HOH A3101 32.129 22.425 -24.408 1.00 51.20 O HETATM 2393 O HOH A3102 31.597 18.684 -25.601 1.00 57.74 O HETATM 2394 O HOH A3103 30.723 22.909 -19.920 1.00 50.90 O HETATM 2395 O HOH A3104 33.981 19.698 -12.784 1.00 50.97 O HETATM 2396 O HOH A3105 29.362 3.671 -21.505 1.00 66.32 O HETATM 2397 O HOH A3106 20.647 4.166 -21.626 1.00 73.03 O HETATM 2398 O HOH A3107 25.705 1.055 -23.937 1.00 70.50 O HETATM 2399 O HOH A3108 31.621 2.007 -19.600 1.00 55.06 O HETATM 2400 O HOH A3109 36.158 7.280 -18.092 1.00 39.67 O HETATM 2401 O HOH A3110 40.560 4.815 -17.416 1.00 53.91 O HETATM 2402 O HOH A3111 43.608 4.826 -14.879 1.00 36.43 O HETATM 2403 O HOH A3112 44.612 -6.364 -13.062 1.00 58.21 O HETATM 2404 O HOH A3113 38.811 -6.542 -16.073 1.00 56.50 O HETATM 2405 O HOH A3114 38.545 -3.909 -16.618 1.00 60.23 O HETATM 2406 O HOH A3115 39.179 -10.230 -9.981 1.00 35.62 O HETATM 2407 O HOH A3116 36.340 -6.269 -16.417 1.00 76.47 O HETATM 2408 O HOH A3117 34.590 -11.845 -11.524 1.00 42.56 O HETATM 2409 O HOH A3118 32.775 -7.716 -6.724 1.00 42.96 O HETATM 2410 O HOH A3119 27.050 0.966 -14.512 1.00 40.55 O HETATM 2411 O HOH A3120 18.570 0.778 -17.589 1.00 52.58 O HETATM 2412 O HOH A3121 17.846 -1.688 -2.626 1.00 69.65 O HETATM 2413 O HOH A3122 11.823 -0.215 -5.324 1.00 67.71 O HETATM 2414 O HOH A3123 13.085 1.638 -4.083 1.00 75.79 O HETATM 2415 O HOH A3124 20.591 -6.998 -7.390 1.00 65.26 O HETATM 2416 O HOH A3125 22.786 -11.260 -5.275 1.00 66.75 O HETATM 2417 O HOH A3126 28.245 -11.008 0.596 1.00 45.87 O HETATM 2418 O HOH A3127 31.701 -1.333 9.007 1.00 37.66 O HETATM 2419 O HOH A3128 33.736 -3.106 10.386 1.00 63.08 O HETATM 2420 O HOH A3129 36.871 -14.321 -0.917 1.00 47.25 O HETATM 2421 O HOH A3130 44.763 -8.800 6.550 1.00 56.62 O HETATM 2422 O HOH A3131 47.337 -4.270 6.182 1.00 68.96 O HETATM 2423 O HOH A3132 42.435 -16.739 -3.536 1.00 43.29 O HETATM 2424 O HOH A3133 45.131 -12.948 3.505 1.00 72.15 O HETATM 2425 O HOH A3134 49.827 -7.919 0.939 1.00 34.96 O HETATM 2426 O HOH A3135 43.436 22.579 -2.066 1.00 58.82 O HETATM 2427 O HOH A3136 52.677 2.614 -14.484 1.00 58.40 O HETATM 2428 O HOH A3137 17.349 1.924 6.372 1.00 71.85 O CONECT 2262 2263 CONECT 2263 2262 2264 2268 CONECT 2264 2263 2265 CONECT 2265 2264 2266 CONECT 2266 2265 2267 2269 CONECT 2267 2266 CONECT 2268 2263 2269 2271 CONECT 2269 2266 2268 2270 CONECT 2270 2269 CONECT 2271 2268 2272 2273 CONECT 2272 2271 CONECT 2273 2271 2274 CONECT 2274 2273 2275 2276 CONECT 2275 2274 2280 CONECT 2276 2274 2277 2278 CONECT 2277 2276 CONECT 2278 2276 2279 CONECT 2279 2278 2280 CONECT 2280 2275 2279 2281 CONECT 2281 2280 2282 2283 CONECT 2282 2281 2285 CONECT 2283 2281 2284 CONECT 2284 2283 2285 2286 CONECT 2285 2282 2284 CONECT 2286 2284 2287 2291 CONECT 2287 2286 2288 CONECT 2288 2287 2289 CONECT 2289 2288 2290 CONECT 2290 2289 2291 CONECT 2291 2286 2290 MASTER 343 0 1 12 9 0 3 6 2427 1 30 25 END