HEADER HYDROLASE 07-DEC-12 3ZET TITLE STRUCTURE OF A SALMONELLA TYPHIMURIUM YGJD-YEAZ HETERODIMER. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE M22 PEPTIDASE YEAZ; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: YEAZ; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PROBABLE TRNA THREONYLCARBAMOYLADENOSINE BIOSYNTHESIS COMPND 8 PROTEIN GCP; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: YGJD, T(6)A37 THREONYLCARBAMOYLADENOSINE BIOSYNTHESIS COMPND 11 PROTEIN; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: TITLE STRUCTURE OF A SALMONELLA TYPHIMURIUM COMPND 14 YGJD-YEAZ HETERODIMER. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TYPHIMURIUM STR. ST4/74; SOURCE 4 ORGANISM_TAXID: 909946; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 9 TYPHIMURIUM STR. ST4/74; SOURCE 10 ORGANISM_TAXID: 909946; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE, YJEE, NUCLEOTIDE BINDING EXPDTA X-RAY DIFFRACTION AUTHOR C.E.NICHOLS,H.K.LAMB,P.THOMPSON,K.EL OMARI,M.LOCKYER,I.CHARLES, AUTHOR 2 A.R.HAWKINS,D.K.STAMMERS REVDAT 2 08-MAY-13 3ZET 1 JRNL REVDAT 1 20-MAR-13 3ZET 0 JRNL AUTH C.E.NICHOLS,H.K.LAMB,P.THOMPSON,K.E.OMARI,M.LOCKYER, JRNL AUTH 2 I.CHARLES,A.R.HAWKINS,D.K.STAMMERS JRNL TITL CRYSTAL STRUCTURE OF THE DIMER OF TWO ESSENTIAL SALMONELLA JRNL TITL 2 TYPHIMURIUM PROTEINS, YGJD & YEAZ AND CALORIMETRIC EVIDENCE JRNL TITL 3 FOR THE FORMATION OF A TERNARY YGJD-YEAZ-YJEE COMPLEX. JRNL REF PROTEIN SCI. V. 22 628 2013 JRNL REFN ISSN 0961-8368 JRNL PMID 23471679 JRNL DOI 10.1002/PRO.2247 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.38 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.0 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.74 REMARK 3 NUMBER OF REFLECTIONS : 25974 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.1811 REMARK 3 R VALUE (WORKING SET) : 0.1781 REMARK 3 FREE R VALUE : 0.2347 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.07 REMARK 3 FREE R VALUE TEST SET COUNT : 1316 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 13 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.40 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.74 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3026 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2162 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2874 REMARK 3 BIN R VALUE (WORKING SET) : 0.2126 REMARK 3 BIN FREE R VALUE : 0.2843 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.02 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 152 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4219 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 207 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.9710 REMARK 3 B22 (A**2) : -1.9195 REMARK 3 B33 (A**2) : 2.8905 REMARK 3 B12 (A**2) : 0.0000 REMARK 3 B13 (A**2) : -3.5039 REMARK 3 B23 (A**2) : 0.0000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.268 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.309 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.224 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.307 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.227 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.9420 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.9018 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4338 ; 2.00 ; HARMONIC REMARK 3 BOND ANGLES : 5890 ; 2.00 ; HARMONIC REMARK 3 TORSION ANGLES : 1981 ; 2.00 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 93 ; 2.00 ; HARMONIC REMARK 3 GENERAL PLANES : 655 ; 5.00 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4338 ; 20.00 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.00 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 567 ; 5.00 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5114 ; 4.00 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.03 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.12 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.84 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 23.9168 -2.3678 16.0014 REMARK 3 T TENSOR REMARK 3 T11: -0.0377 T22: -0.0547 REMARK 3 T33: -0.0214 T12: 0.0184 REMARK 3 T13: -0.0101 T23: 0.0227 REMARK 3 L TENSOR REMARK 3 L11: 1.0902 L22: 0.8115 REMARK 3 L33: 1.5368 L12: 0.3294 REMARK 3 L13: 0.0219 L23: 0.1665 REMARK 3 S TENSOR REMARK 3 S11: 0.0543 S12: 0.0567 S13: 0.0246 REMARK 3 S21: 0.0334 S22: 0.0332 S23: 0.0216 REMARK 3 S31: 0.0167 S32: -0.0731 S33: -0.0874 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 30.1971 1.0669 54.7504 REMARK 3 T TENSOR REMARK 3 T11: -0.0394 T22: -0.0711 REMARK 3 T33: -0.0096 T12: -0.0252 REMARK 3 T13: -0.0208 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.8894 L22: 0.4419 REMARK 3 L33: 1.5299 L12: 0.1806 REMARK 3 L13: -0.3613 L23: 0.1545 REMARK 3 S TENSOR REMARK 3 S11: 0.0846 S12: -0.1050 S13: -0.1177 REMARK 3 S21: 0.0584 S22: -0.0266 S23: -0.0347 REMARK 3 S31: 0.0408 S32: 0.1565 S33: -0.0580 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: IDEAL-DIST CONTACT TERM CONTACT SETUP. REMARK 3 RESIDUE TYPES WITHOUT CCP4 ATOM TYPE IN LIBRARY=CD. NUMBER OF REMARK 3 ATOMS WITH PROPER CCP4 ATOM TYPE=4460. NUMBER WITH APPROX DEFAULT REMARK 3 CCP4 ATOM TYPE=0. NUMBER TREATED BY BAD NON-BONDED CONTACTS=1. REMARK 4 REMARK 4 3ZET COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-DEC-12. REMARK 100 THE PDBE ID CODE IS EBI-55033. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9801 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26090 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.30 REMARK 200 RESOLUTION RANGE LOW (A) : 50.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 5.2 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 4.0 REMARK 200 R MERGE (I) : 0.12 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.10 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.1 REMARK 200 R MERGE FOR SHELL (I) : 0.65 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.20 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.6 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 GLYCEROL, 16 POLYETHYLENE REMARK 280 GLYCOL 8000, 0.080 M SODIUM CACODYLATE PH 6.5, 0.160 M REMARK 280 MAGNESIUM ACETATE, 20 MM CADMIUM CHLORIDE DIHYDRATE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 60.57600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.83150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 60.57600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.83150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 175 REMARK 465 GLU A 176 REMARK 465 CYS A 177 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 116 O HOH A 2056 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 8 15.61 -142.54 REMARK 500 THR A 10 -161.98 -123.03 REMARK 500 MET A 119 10.57 87.25 REMARK 500 GLU A 206 58.47 -99.85 REMARK 500 LEU A 218 -55.83 70.21 REMARK 500 ALA A 223 35.39 -87.02 REMARK 500 THR B 8 35.98 -144.54 REMARK 500 CYS B 10 -116.88 -133.91 REMARK 500 ASN B 124 64.62 61.05 REMARK 500 ASP B 159 -115.11 -141.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 401 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 111 NE2 REMARK 620 2 ASP B 300 OD1 97.3 REMARK 620 3 HOH B2047 O 91.8 76.8 REMARK 620 4 HIS B 115 NE2 85.0 93.1 168.9 REMARK 620 5 AMP B 400 O3P 178.8 81.5 87.6 95.4 REMARK 620 6 HOH B2048 O 81.8 168.9 92.2 97.9 99.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TAM A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AMP B 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ZEU RELATED DB: PDB REMARK 900 STRUCTURE OF A SALMONELLA TYPHIMURIUM YGJD-YEAZ REMARK 900 HETERODIMER BOUND TO ATPGAMMAS DBREF 3ZET A 1 229 UNP E8X8J1 E8X8J1_SALT4 1 229 DBREF 3ZET B 1 337 UNP E8XBD7 E8XBD7_SALT4 1 337 SEQRES 1 A 229 MET ARG ILE LEU ALA ILE ASP THR ALA THR GLU ALA CYS SEQRES 2 A 229 SER VAL ALA LEU TRP ASN ASN GLY THR ILE ASN ALA HIS SEQRES 3 A 229 PHE GLU LEU CYS PRO ARG GLU HIS THR GLN ARG ILE LEU SEQRES 4 A 229 PRO MET VAL GLN GLU ILE LEU ALA ALA SER GLY ALA SER SEQRES 5 A 229 LEU ASN GLU ILE ASP ALA LEU ALA PHE GLY ARG GLY PRO SEQRES 6 A 229 GLY SER PHE THR GLY VAL ARG ILE GLY ILE GLY ILE ALA SEQRES 7 A 229 GLN GLY LEU ALA LEU GLY ALA ASN LEU PRO MET ILE GLY SEQRES 8 A 229 VAL SER THR LEU ALA THR MET ALA GLN GLY ALA TRP ARG SEQRES 9 A 229 LYS THR GLY ALA THR ARG VAL LEU ALA ALA ILE ASP ALA SEQRES 10 A 229 ARG MET GLY GLU VAL TYR TRP ALA GLU TYR GLN ARG ASP SEQRES 11 A 229 ALA GLN GLY VAL TRP GLN GLY GLU GLU THR GLU ALA VAL SEQRES 12 A 229 LEU LYS PRO GLU ARG VAL GLY GLU ARG LEU LYS GLN LEU SEQRES 13 A 229 SER GLY GLU TRP ALA THR VAL GLY THR GLY TRP SER ALA SEQRES 14 A 229 TRP PRO ASP LEU ALA LYS GLU CYS GLY LEU THR LEU HIS SEQRES 15 A 229 ASP GLY GLU VAL SER LEU PRO ALA ALA GLU ASP MET LEU SEQRES 16 A 229 PRO ILE ALA SER GLN LYS LEU ALA ALA GLY GLU THR VAL SEQRES 17 A 229 ALA VAL GLU HIS ALA GLU PRO VAL TYR LEU ARG ASN GLU SEQRES 18 A 229 VAL ALA TRP LYS LYS LEU PRO GLY SEQRES 1 B 337 MET ARG VAL LEU GLY ILE GLU THR SER CYS ASP GLU THR SEQRES 2 B 337 GLY ILE ALA ILE TYR ASP ASP LYS LYS GLY LEU LEU ALA SEQRES 3 B 337 ASN GLN LEU TYR SER GLN VAL LYS LEU HIS ALA ASP TYR SEQRES 4 B 337 GLY GLY VAL VAL PRO GLU LEU ALA SER ARG ASP HIS VAL SEQRES 5 B 337 ARG LYS THR VAL PRO LEU ILE GLN ALA ALA LEU LYS GLU SEQRES 6 B 337 ALA GLY LEU THR ALA SER ASP ILE ASP ALA VAL ALA TYR SEQRES 7 B 337 THR ALA GLY PRO GLY LEU VAL GLY ALA LEU LEU VAL GLY SEQRES 8 B 337 ALA THR VAL GLY ARG SER LEU ALA PHE ALA TRP ASN VAL SEQRES 9 B 337 PRO ALA ILE PRO VAL HIS HIS MET GLU GLY HIS LEU LEU SEQRES 10 B 337 ALA PRO MET LEU GLU ASP ASN PRO PRO GLU PHE PRO PHE SEQRES 11 B 337 VAL ALA LEU LEU VAL SER GLY GLY HIS THR GLN LEU ILE SEQRES 12 B 337 SER VAL THR GLY ILE GLY GLN TYR GLU LEU LEU GLY GLU SEQRES 13 B 337 SER ILE ASP ASP ALA ALA GLY GLU ALA PHE ASP LYS THR SEQRES 14 B 337 ALA LYS LEU LEU GLY LEU ASP TYR PRO GLY GLY PRO MET SEQRES 15 B 337 LEU SER LYS MET ALA SER GLN GLY THR ALA GLY ARG PHE SEQRES 16 B 337 VAL PHE PRO ARG PRO MET THR ASP ARG PRO GLY LEU ASP SEQRES 17 B 337 PHE SER PHE SER GLY LEU LYS THR PHE ALA ALA ASN THR SEQRES 18 B 337 ILE ARG SER ASN GLY GLY ASP GLU GLN THR ARG ALA ASP SEQRES 19 B 337 ILE ALA ARG ALA PHE GLU ASP ALA VAL VAL ASP THR LEU SEQRES 20 B 337 MET ILE LYS CYS LYS ARG ALA LEU GLU SER THR GLY PHE SEQRES 21 B 337 LYS ARG LEU VAL MET ALA GLY GLY VAL SER ALA ASN ARG SEQRES 22 B 337 THR LEU ARG ALA LYS LEU ALA GLU MET MET GLN LYS ARG SEQRES 23 B 337 ARG GLY GLU VAL PHE TYR ALA ARG PRO GLU PHE CYS THR SEQRES 24 B 337 ASP ASN GLY ALA MET ILE ALA TYR ALA GLY MET VAL ARG SEQRES 25 B 337 PHE LYS ALA GLY VAL THR ALA ASP LEU GLY VAL THR VAL SEQRES 26 B 337 ARG PRO ARG TRP PRO LEU ALA GLU LEU PRO ALA ALA HET TAM A 400 11 HET AMP B 400 23 HET CD B 401 1 HETNAM TAM TRIS(HYDROXYETHYL)AMINOMETHANE HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM CD CADMIUM ION FORMUL 3 TAM C7 H17 N O3 FORMUL 4 AMP C10 H14 N5 O7 P FORMUL 5 CD CD 2+ FORMUL 6 HOH *207(H2 O) HELIX 1 1 GLU A 33 SER A 49 1 17 HELIX 2 2 SER A 52 ILE A 56 5 5 HELIX 3 3 SER A 67 ASN A 86 1 20 HELIX 4 4 THR A 94 GLY A 107 1 14 HELIX 5 5 GLY A 137 GLU A 141 5 5 HELIX 6 6 LYS A 145 LEU A 156 1 12 HELIX 7 7 THR A 165 TRP A 170 1 6 HELIX 8 8 PRO A 171 ALA A 174 5 4 HELIX 9 9 ALA A 190 ALA A 204 1 15 HELIX 10 10 ALA A 209 ALA A 213 5 5 HELIX 11 11 GLN B 32 ASP B 38 1 7 HELIX 12 12 VAL B 43 GLY B 67 1 25 HELIX 13 13 THR B 69 ILE B 73 5 5 HELIX 14 14 LEU B 84 ASN B 103 1 20 HELIX 15 15 HIS B 111 ALA B 118 1 8 HELIX 16 16 PRO B 119 GLU B 122 5 4 HELIX 17 17 ALA B 161 LEU B 173 1 13 HELIX 18 18 GLY B 179 SER B 188 1 10 HELIX 19 19 PHE B 211 SER B 224 1 14 HELIX 20 20 ASP B 228 GLY B 259 1 32 HELIX 21 21 GLY B 267 ALA B 271 5 5 HELIX 22 22 ASN B 272 ARG B 286 1 15 HELIX 23 23 ARG B 294 CYS B 298 5 5 HELIX 24 24 GLY B 302 ALA B 315 1 14 SHEET 1 AA 5 THR A 22 LEU A 29 0 SHEET 2 AA 5 ALA A 12 ASN A 19 -1 O CYS A 13 N GLU A 28 SHEET 3 AA 5 ARG A 2 ASP A 7 -1 O ILE A 3 N TRP A 18 SHEET 4 AA 5 ALA A 58 GLY A 64 1 O ALA A 58 N LEU A 4 SHEET 5 AA 5 MET A 89 SER A 93 1 O ILE A 90 N PHE A 61 SHEET 1 AB 2 TRP A 135 GLN A 136 0 SHEET 2 AB 2 VAL A 122 ARG A 129 1 O GLN A 128 N GLN A 136 SHEET 1 AC 2 ALA A 142 LEU A 144 0 SHEET 2 AC 2 VAL A 122 ARG A 129 -1 O VAL A 122 N LEU A 144 SHEET 1 AD 5 THR A 180 ASP A 183 0 SHEET 2 AD 5 GLU A 159 VAL A 163 1 O TRP A 160 N HIS A 182 SHEET 3 AD 5 ARG A 110 ILE A 115 1 O ARG A 110 N ALA A 161 SHEET 4 AD 5 VAL A 122 ARG A 129 -1 O TYR A 123 N ILE A 115 SHEET 5 AD 5 TRP A 135 GLN A 136 1 O GLN A 136 N GLN A 128 SHEET 1 AE 5 THR A 180 ASP A 183 0 SHEET 2 AE 5 GLU A 159 VAL A 163 1 O TRP A 160 N HIS A 182 SHEET 3 AE 5 ARG A 110 ILE A 115 1 O ARG A 110 N ALA A 161 SHEET 4 AE 5 VAL A 122 ARG A 129 -1 O TYR A 123 N ILE A 115 SHEET 5 AE 5 ALA A 142 LEU A 144 -1 O ALA A 142 N TRP A 124 SHEET 1 BA 5 GLY B 23 SER B 31 0 SHEET 2 BA 5 GLU B 12 ASP B 19 -1 O THR B 13 N TYR B 30 SHEET 3 BA 5 ARG B 2 GLU B 7 -1 O VAL B 3 N TYR B 18 SHEET 4 BA 5 ALA B 75 GLY B 81 1 O ALA B 75 N LEU B 4 SHEET 5 BA 5 ALA B 106 HIS B 110 1 O ILE B 107 N TYR B 78 SHEET 1 BB 5 GLN B 150 GLU B 156 0 SHEET 2 BB 5 THR B 140 GLY B 147 -1 O LEU B 142 N LEU B 154 SHEET 3 BB 5 PHE B 130 VAL B 135 -1 O PHE B 130 N VAL B 145 SHEET 4 BB 5 ARG B 262 ALA B 266 1 O ARG B 262 N VAL B 131 SHEET 5 BB 5 GLU B 289 PHE B 291 1 O GLU B 289 N LEU B 263 SSBOND 1 CYS A 13 CYS A 30 1555 1555 2.07 LINK O3P AMP B 400 CD CD B 401 1555 1555 2.34 LINK CD CD B 401 O HOH B2048 1555 1555 2.20 LINK CD CD B 401 OD1 ASP B 300 1555 1555 2.28 LINK CD CD B 401 O HOH B2047 1555 1555 2.44 LINK CD CD B 401 NE2 HIS B 115 1555 1555 2.31 LINK CD CD B 401 NE2 HIS B 111 1555 1555 2.28 CISPEP 1 GLY A 64 PRO A 65 0 2.31 CISPEP 2 GLY B 81 PRO B 82 0 -3.88 CISPEP 3 PHE B 128 PRO B 129 0 1.16 CISPEP 4 TYR B 177 PRO B 178 0 -7.10 SITE 1 AC1 4 SER A 67 PHE A 68 THR A 69 ARG A 118 SITE 1 AC2 14 HIS B 115 SER B 136 GLY B 137 GLY B 163 SITE 2 AC2 14 ASP B 167 GLY B 180 PRO B 181 GLY B 267 SITE 3 AC2 14 GLY B 268 VAL B 269 ASN B 272 ASP B 300 SITE 4 AC2 14 CD B 401 HOH B2092 SITE 1 AC3 6 HIS B 111 HIS B 115 ASP B 300 AMP B 400 SITE 2 AC3 6 HOH B2047 HOH B2048 CRYST1 121.152 61.663 83.835 90.00 101.14 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008254 0.000000 0.001625 0.00000 SCALE2 0.000000 0.016217 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012157 0.00000