HEADER TRANSFERASE 30-JAN-13 3ZLB TITLE CRYSTAL STRUCTURE OF PHOSPHOGLYCERATE KINASE FROM STREPTOCOCCUS TITLE 2 PNEUMONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOGLYCERATE KINASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.2.3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 373153; SOURCE 4 STRAIN: D39; SOURCE 5 ATCC: 7466; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: M15(PREP4); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR N.BERNARDO-GARCIA,J.A.HERMOSO REVDAT 3 20-DEC-23 3ZLB 1 REMARK LINK REVDAT 2 27-FEB-19 3ZLB 1 JRNL REVDAT 1 12-FEB-14 3ZLB 0 JRNL AUTH M.FULDE,N.BERNARDO-GARCIA,M.ROHDE,N.NACHTIGALL,R.FRANK, JRNL AUTH 2 K.T.PREISSNER,J.KLETT,A.MORREALE,G.S.CHHATWAL,J.A.HERMOSO, JRNL AUTH 3 S.BERGMANN JRNL TITL PNEUMOCOCCAL PHOSPHOGLYCERATE KINASE INTERACTS WITH JRNL TITL 2 PLASMINOGEN AND ITS TISSUE ACTIVATOR. JRNL REF THROMB. HAEMOST. V. 111 401 2014 JRNL REFN ISSN 2567-689X JRNL PMID 24196407 JRNL DOI 10.1160/TH13-05-0421 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 34945 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.148 REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1751 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.9532 - 4.1845 1.00 2609 141 0.1457 0.1810 REMARK 3 2 4.1845 - 3.3216 1.00 2586 131 0.1191 0.1484 REMARK 3 3 3.3216 - 2.9018 1.00 2544 136 0.1339 0.1929 REMARK 3 4 2.9018 - 2.6365 1.00 2574 139 0.1371 0.1830 REMARK 3 5 2.6365 - 2.4476 1.00 2554 119 0.1343 0.1915 REMARK 3 6 2.4476 - 2.3033 1.00 2543 145 0.1417 0.1914 REMARK 3 7 2.3033 - 2.1879 1.00 2553 120 0.1387 0.1903 REMARK 3 8 2.1879 - 2.0927 1.00 2544 140 0.1465 0.2013 REMARK 3 9 2.0927 - 2.0121 1.00 2524 152 0.1528 0.1980 REMARK 3 10 2.0121 - 1.9427 1.00 2557 137 0.1668 0.2469 REMARK 3 11 1.9427 - 1.8819 1.00 2537 128 0.1816 0.2226 REMARK 3 12 1.8819 - 1.8282 1.00 2527 139 0.2054 0.2336 REMARK 3 13 1.8282 - 1.7800 1.00 2542 124 0.2463 0.3405 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.92 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3067 REMARK 3 ANGLE : 1.279 4154 REMARK 3 CHIRALITY : 0.067 474 REMARK 3 PLANARITY : 0.007 531 REMARK 3 DIHEDRAL : 14.638 1117 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 24.0032 -12.9341 -12.4408 REMARK 3 T TENSOR REMARK 3 T11: 0.0760 T22: 0.0692 REMARK 3 T33: 0.0648 T12: -0.0214 REMARK 3 T13: -0.0177 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 0.8548 L22: 0.6448 REMARK 3 L33: 0.5921 L12: -0.5118 REMARK 3 L13: -0.5571 L23: 0.4366 REMARK 3 S TENSOR REMARK 3 S11: 0.0211 S12: 0.0076 S13: 0.0041 REMARK 3 S21: -0.0322 S22: -0.0227 S23: -0.0030 REMARK 3 S31: -0.0289 S32: -0.0009 S33: 0.0042 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3ZLB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1290055679. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34968 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 46.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.59000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1VPE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 4000, 0.2 M MGCL2, 0.1 M TRIS REMARK 280 -HCL PH 8.6 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.11350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ3 LYS A 398 MG MG A 1399 1.46 REMARK 500 O HOH A 2345 O HOH A 2346 1.48 REMARK 500 O HOH A 2347 O HOH A 2348 1.56 REMARK 500 OD2 ASP A 284 O HOH A 2302 1.79 REMARK 500 NZ LYS A 387 O HOH A 2380 2.07 REMARK 500 O SER A 374 O HOH A 2358 2.09 REMARK 500 O HOH A 2100 O HOH A 2204 2.12 REMARK 500 O HOH A 2082 O HOH A 2163 2.13 REMARK 500 O HOH A 2018 O HOH A 2065 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 368 O HOH A 2209 1655 2.03 REMARK 500 O HOH A 2162 O HOH A 2249 2655 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 117 116.28 -32.00 REMARK 500 ASN A 162 -72.29 -121.85 REMARK 500 GLN A 186 -65.74 -103.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2119 DISTANCE = 6.22 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1399 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD2 REMARK 620 2 LYS A 398 NZ 119.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1400 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 288 OE1 REMARK 620 2 HOH A2286 O 91.1 REMARK 620 3 HOH A2307 O 87.2 88.6 REMARK 620 4 HOH A2396 O 173.7 86.4 98.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1407 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ANP A1401 O1B REMARK 620 2 ANP A1401 O2A 86.6 REMARK 620 3 ANP A1401 O1G 88.5 93.9 REMARK 620 4 HOH A2361 O 90.6 84.8 178.5 REMARK 620 5 HOH A2397 O 95.3 173.0 92.9 88.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1406 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2388 O REMARK 620 2 HOH A2390 O 84.6 REMARK 620 3 HOH A2401 O 93.2 175.5 REMARK 620 4 HOH A2402 O 87.7 91.6 84.4 REMARK 620 5 HOH A2403 O 102.5 83.9 100.3 168.5 REMARK 620 6 HOH A2404 O 171.6 90.4 91.4 85.8 83.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1399 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP A 1401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1407 DBREF 3ZLB A 1 398 UNP Q04LZ5 PGK_STRP2 1 398 SEQRES 1 A 398 MET ALA LYS LEU THR VAL LYS ASP VAL ASP LEU LYS GLY SEQRES 2 A 398 LYS LYS VAL LEU VAL ARG VAL ASP PHE ASN VAL PRO LEU SEQRES 3 A 398 LYS ASP GLY VAL ILE THR ASN ASP ASN ARG ILE THR ALA SEQRES 4 A 398 ALA LEU PRO THR ILE LYS TYR ILE ILE GLU GLN GLY GLY SEQRES 5 A 398 ARG ALA ILE LEU PHE SER HIS LEU GLY ARG VAL LYS GLU SEQRES 6 A 398 GLU SER ASP LYS ALA GLY LYS SER LEU ALA PRO VAL ALA SEQRES 7 A 398 ALA ASP LEU ALA ALA LYS LEU GLY GLN ASP VAL VAL PHE SEQRES 8 A 398 PRO GLY VAL THR ARG GLY ALA GLU LEU GLU ALA ALA ILE SEQRES 9 A 398 ASN ALA LEU GLU ASP GLY GLN VAL LEU LEU VAL GLU ASN SEQRES 10 A 398 THR ARG TYR GLU ASP VAL ASP GLY LYS LYS GLU SER LYS SEQRES 11 A 398 ASN ASP PRO GLU LEU GLY LYS TYR TRP ALA SER LEU GLY SEQRES 12 A 398 ASP GLY ILE PHE VAL ASN ASP ALA PHE GLY THR ALA HIS SEQRES 13 A 398 ARG ALA HIS ALA SER ASN VAL GLY ILE SER ALA ASN VAL SEQRES 14 A 398 GLU LYS ALA VAL ALA GLY PHE LEU LEU GLU ASN GLU ILE SEQRES 15 A 398 ALA TYR ILE GLN GLU ALA VAL GLU THR PRO GLU ARG PRO SEQRES 16 A 398 PHE VAL ALA ILE LEU GLY GLY SER LYS VAL SER ASP LYS SEQRES 17 A 398 ILE GLY VAL ILE GLU ASN LEU LEU GLU LYS ALA ASP LYS SEQRES 18 A 398 VAL LEU ILE GLY GLY GLY MET THR TYR THR PHE TYR LYS SEQRES 19 A 398 ALA GLN GLY ILE GLU ILE GLY ASN SER LEU VAL GLU GLU SEQRES 20 A 398 ASP LYS LEU ASP VAL ALA LYS ALA LEU LEU GLU LYS ALA SEQRES 21 A 398 ASN GLY LYS LEU ILE LEU PRO VAL ASP SER LYS GLU ALA SEQRES 22 A 398 ASN ALA PHE ALA GLY TYR THR GLU VAL ARG ASP THR GLU SEQRES 23 A 398 GLY GLU ALA VAL SER GLU GLY PHE LEU GLY LEU ASP ILE SEQRES 24 A 398 GLY PRO LYS SER ILE ALA LYS PHE ASP GLU ALA LEU THR SEQRES 25 A 398 GLY ALA LYS THR VAL VAL TRP ASN GLY PRO MET GLY VAL SEQRES 26 A 398 PHE GLU ASN PRO ASP PHE GLN ALA GLY THR ILE GLY VAL SEQRES 27 A 398 MET ASP ALA ILE VAL LYS GLN PRO GLY VAL LYS SER ILE SEQRES 28 A 398 ILE GLY GLY GLY ASP SER ALA ALA ALA ALA ILE ASN LEU SEQRES 29 A 398 GLY ARG ALA ASP LYS PHE SER TRP ILE SER THR GLY GLY SEQRES 30 A 398 GLY ALA SER MET GLU LEU LEU GLU GLY LYS VAL LEU PRO SEQRES 31 A 398 GLY LEU ALA ALA LEU THR GLU LYS HET MG A1399 1 HET MG A1400 1 HET ANP A1401 46 HET GOL A1402 14 HET GOL A1403 14 HET GOL A1404 14 HET GOL A1405 14 HET MG A1406 1 HET MG A1407 1 HETNAM MG MAGNESIUM ION HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 MG 4(MG 2+) FORMUL 4 ANP C10 H17 N6 O12 P3 FORMUL 5 GOL 4(C3 H8 O3) FORMUL 11 HOH *404(H2 O) HELIX 1 1 VAL A 6 VAL A 9 5 4 HELIX 2 2 ASP A 34 GLN A 50 1 17 HELIX 3 3 GLU A 65 LYS A 69 5 5 HELIX 4 4 LEU A 74 GLY A 86 1 13 HELIX 5 5 GLY A 97 ALA A 106 1 10 HELIX 6 6 ASN A 117 VAL A 123 5 7 HELIX 7 7 ASP A 132 LEU A 142 1 11 HELIX 8 8 ALA A 151 ALA A 155 5 5 HELIX 9 9 ASN A 162 ALA A 167 1 6 HELIX 10 10 GLY A 175 GLN A 186 1 12 HELIX 11 11 GLN A 186 THR A 191 1 6 HELIX 12 12 LYS A 208 ALA A 219 1 12 HELIX 13 13 GLY A 227 GLN A 236 1 10 HELIX 14 14 GLU A 246 ASP A 248 5 3 HELIX 15 15 LYS A 249 ALA A 260 1 12 HELIX 16 16 GLY A 300 THR A 312 1 13 HELIX 17 17 ASN A 328 PHE A 331 5 4 HELIX 18 18 GLN A 332 LYS A 344 1 13 HELIX 19 19 GLY A 354 LEU A 364 1 11 HELIX 20 20 ARG A 366 PHE A 370 5 5 HELIX 21 21 GLY A 377 GLU A 385 1 9 HELIX 22 22 LEU A 389 ALA A 394 1 6 SHEET 1 AA 6 VAL A 89 VAL A 90 0 SHEET 2 AA 6 VAL A 112 LEU A 114 1 O VAL A 112 N VAL A 90 SHEET 3 AA 6 ARG A 53 PHE A 57 1 O ALA A 54 N LEU A 113 SHEET 4 AA 6 LYS A 15 ARG A 19 1 O VAL A 16 N ILE A 55 SHEET 5 AA 6 ILE A 146 ASN A 149 1 O ILE A 146 N LEU A 17 SHEET 6 AA 6 LYS A 171 ALA A 174 1 O LYS A 171 N PHE A 147 SHEET 1 AB 2 LEU A 26 LYS A 27 0 SHEET 2 AB 2 VAL A 30 ILE A 31 -1 O VAL A 30 N LYS A 27 SHEET 1 AC 6 LEU A 264 ILE A 265 0 SHEET 2 AC 6 LYS A 221 ILE A 224 1 O VAL A 222 N ILE A 265 SHEET 3 AC 6 PHE A 196 LEU A 200 1 O ALA A 198 N LEU A 223 SHEET 4 AC 6 THR A 316 ASN A 320 1 O THR A 316 N VAL A 197 SHEET 5 AC 6 LYS A 349 ILE A 352 1 O LYS A 349 N VAL A 317 SHEET 6 AC 6 TRP A 372 ILE A 373 1 O TRP A 372 N ILE A 352 SHEET 1 AD 3 VAL A 282 ASP A 284 0 SHEET 2 AD 3 SER A 270 ALA A 273 -1 O GLU A 272 N ARG A 283 SHEET 3 AD 3 LEU A 295 ILE A 299 -1 O LEU A 295 N ALA A 273 LINK OD2 ASP A 8 MG MG A1399 1555 1555 2.66 LINK OE1 GLU A 288 MG MG A1400 1555 1555 2.06 LINK NZ LYS A 398 MG MG A1399 1555 1555 2.03 LINK MG MG A1400 O HOH A2286 1555 1555 2.07 LINK MG MG A1400 O HOH A2307 1555 1555 2.12 LINK MG MG A1400 O HOH A2396 1555 1555 2.05 LINK O1B ANP A1401 MG MG A1407 1555 1555 2.07 LINK O2A ANP A1401 MG MG A1407 1555 1555 2.07 LINK O1G ANP A1401 MG MG A1407 1555 1555 2.08 LINK MG MG A1406 O HOH A2388 1555 1555 2.15 LINK MG MG A1406 O HOH A2390 1555 1555 2.09 LINK MG MG A1406 O HOH A2401 1555 1555 2.15 LINK MG MG A1406 O HOH A2402 1555 1555 2.30 LINK MG MG A1406 O HOH A2403 1555 1555 2.07 LINK MG MG A1406 O HOH A2404 1555 1555 2.23 LINK MG MG A1407 O HOH A2361 1555 1555 2.03 LINK MG MG A1407 O HOH A2397 1555 1555 2.09 CISPEP 1 ARG A 194 PRO A 195 0 -1.42 SITE 1 AC1 5 MET A 1 LYS A 3 ASP A 8 LYS A 398 SITE 2 AC1 5 GOL A1403 SITE 1 AC2 4 GLU A 288 HOH A2286 HOH A2307 HOH A2396 SITE 1 AC3 28 GLY A 202 SER A 203 LYS A 208 GLY A 226 SITE 2 AC3 28 GLY A 227 GLY A 296 ASN A 320 PRO A 322 SITE 3 AC3 28 GLY A 324 VAL A 325 GLU A 327 GLY A 354 SITE 4 AC3 28 GLY A 355 ASP A 356 SER A 357 MG A1407 SITE 5 AC3 28 HOH A2241 HOH A2243 HOH A2244 HOH A2249 SITE 6 AC3 28 HOH A2256 HOH A2271 HOH A2361 HOH A2362 SITE 7 AC3 28 HOH A2378 HOH A2397 HOH A2398 HOH A2399 SITE 1 AC4 1 ALA A 83 SITE 1 AC5 7 MET A 1 THR A 5 LYS A 7 ASP A 8 SITE 2 AC5 7 LYS A 398 MG A1399 HOH A2001 SITE 1 AC6 10 ASP A 21 ALA A 151 PHE A 152 GLY A 153 SITE 2 AC6 10 LEU A 177 GLU A 181 THR A 375 GLY A 376 SITE 3 AC6 10 HOH A2042 HOH A2201 SITE 1 AC7 4 ASP A 88 VAL A 89 HOH A2137 HOH A2400 SITE 1 AC8 6 HOH A2388 HOH A2390 HOH A2401 HOH A2402 SITE 2 AC8 6 HOH A2403 HOH A2404 SITE 1 AC9 3 ANP A1401 HOH A2361 HOH A2397 CRYST1 40.347 78.227 59.033 90.00 96.34 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024785 0.000000 0.002754 0.00000 SCALE2 0.000000 0.012783 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017044 0.00000