HEADER VIRAL PROTEIN 27-FEB-13 3ZPE TITLE STRUCTURE OF THE CARBOXY-TERMINAL DOMAIN OF THE TURKEY TYPE 3 TITLE 2 SIADENOVIRUS FIBRE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBER; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HEAD DOMAIN, RESIDUES 301-454; COMPND 5 SYNONYM: TURKEY ADENOVIRUS TYPE 3 FIBRE; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AVIRULENT TURKEY HEMORRHAGIC ENTERITIS VIRUS; SOURCE 3 ORGANISM_TAXID: 318490; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A; SOURCE 9 OTHER_DETAILS: ARKO LABORATORIES, JEWELL IA, USA KEYWDS VIRAL PROTEIN, TURKEY HEMORRHAGIC ENTERITIS VIRUS, BETA-SANDWICH EXPDTA X-RAY DIFFRACTION AUTHOR A.K.SINGH,M.J.VAN RAAIJ REVDAT 4 08-MAY-24 3ZPE 1 REMARK REVDAT 3 17-JAN-18 3ZPE 1 JRNL REVDAT 2 14-OCT-15 3ZPE 1 JRNL REVDAT 1 12-MAR-14 3ZPE 0 JRNL AUTH A.K.SINGH,M.A.BERBIS,M.Z.BALLMANN,M.KILCOYNE,M.MENENDEZ, JRNL AUTH 2 T.H.NGUYEN,L.JOSHI,F.J.CANADA,J.JIMENEZ-BARBERO,M.BENKO, JRNL AUTH 3 B.HARRACH,M.J.VAN RAAIJ JRNL TITL STRUCTURE AND SIALYLLACTOSE BINDING OF THE CARBOXY-TERMINAL JRNL TITL 2 HEAD DOMAIN OF THE FIBRE FROM A SIADENOVIRUS, TURKEY JRNL TITL 3 ADENOVIRUS 3. JRNL REF PLOS ONE V. 10 39339 2015 JRNL REFN ESSN 1932-6203 JRNL PMID 26418008 JRNL DOI 10.1371/JOURNAL.PONE.0139339 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 7866 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM COPIED FROM SEMET REMARK 3 DERIVATIVE REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 384 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.32 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1128 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2510 REMARK 3 BIN FREE R VALUE SET COUNT : 55 REMARK 3 BIN FREE R VALUE : 0.3320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1092 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 57 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.265 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.207 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.165 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.563 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1117 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1515 ; 1.506 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 137 ; 7.624 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 46 ;38.494 ;24.130 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 202 ;15.598 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;23.017 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 178 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 819 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 402 ; 0.225 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 756 ; 0.315 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 68 ; 0.139 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 40 ; 0.203 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.186 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 689 ; 0.995 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1133 ; 1.863 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 428 ; 2.193 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 382 ; 3.707 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 3ZPE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1290055980. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9768 REMARK 200 MONOCHROMATOR : CHANNEL CUT ESRF MONOCHROMATOR REMARK 200 OPTICS : TOROIDAL FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8256 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.60 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.00 REMARK 200 R MERGE FOR SHELL (I) : 0.69000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25 MM MORPHOLINO-ETHANESULFONIC ACID, REMARK 280 0.5-1.0 M DIAMMONIUM PHOSPHATE, 0.1 M SODIUM CITRATE PH 5.5-5.8, REMARK 280 0.2-0.3 M SODIUM CHLORIDE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 49.28500 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 49.28500 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 49.28500 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 49.28500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 49.28500 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 49.28500 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 49.28500 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 49.28500 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 49.28500 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 49.28500 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 49.28500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 49.28500 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 49.28500 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 49.28500 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 49.28500 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 49.28500 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 49.28500 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 49.28500 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 49.28500 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 49.28500 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 49.28500 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 49.28500 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 49.28500 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 49.28500 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 49.28500 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 49.28500 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 49.28500 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 49.28500 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 49.28500 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 49.28500 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 49.28500 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 49.28500 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 49.28500 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 49.28500 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 49.28500 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 49.28500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 1.000000 0.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 265 REMARK 465 GLY A 266 REMARK 465 SER A 267 REMARK 465 SER A 268 REMARK 465 HIS A 269 REMARK 465 HIS A 270 REMARK 465 HIS A 271 REMARK 465 HIS A 272 REMARK 465 HIS A 273 REMARK 465 HIS A 274 REMARK 465 SER A 275 REMARK 465 SER A 276 REMARK 465 GLY A 277 REMARK 465 LEU A 278 REMARK 465 VAL A 279 REMARK 465 PRO A 280 REMARK 465 ARG A 281 REMARK 465 GLY A 282 REMARK 465 SER A 283 REMARK 465 HIS A 284 REMARK 465 MET A 285 REMARK 465 ALA A 286 REMARK 465 SER A 287 REMARK 465 MET A 288 REMARK 465 THR A 289 REMARK 465 GLY A 290 REMARK 465 GLY A 291 REMARK 465 GLN A 292 REMARK 465 GLN A 293 REMARK 465 MET A 294 REMARK 465 GLY A 295 REMARK 465 ARG A 296 REMARK 465 GLY A 297 REMARK 465 SER A 298 REMARK 465 GLU A 299 REMARK 465 PHE A 300 REMARK 465 ALA A 301 REMARK 465 SER A 302 REMARK 465 ILE A 303 REMARK 465 GLY A 304 REMARK 465 PRO A 305 REMARK 465 PRO A 306 REMARK 465 THR A 307 REMARK 465 THR A 308 REMARK 465 MET A 309 REMARK 465 VAL A 310 REMARK 465 THR A 311 REMARK 465 GLY A 312 REMARK 465 THR A 313 REMARK 465 VAL A 314 REMARK 465 SER A 315 REMARK 465 PRO A 316 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 340 128.01 -7.49 REMARK 500 ASN A 407 5.39 59.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1455 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ZPF RELATED DB: PDB REMARK 900 STRUCTURE OF THE CARBOXY-TERMINAL DOMAIN OF THE TURKEY TYPE 3 REMARK 900 SIADENOVIRUS FIBRE DBREF 3ZPE A 301 454 UNP Q2TLC1 Q2TLC1_9ADEN 301 454 SEQADV 3ZPE MET A 265 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE GLY A 266 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE SER A 267 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE SER A 268 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE HIS A 269 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE HIS A 270 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE HIS A 271 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE HIS A 272 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE HIS A 273 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE HIS A 274 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE SER A 275 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE SER A 276 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE GLY A 277 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE LEU A 278 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE VAL A 279 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE PRO A 280 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE ARG A 281 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE GLY A 282 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE SER A 283 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE HIS A 284 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE MET A 285 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE ALA A 286 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE SER A 287 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE MET A 288 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE THR A 289 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE GLY A 290 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE GLY A 291 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE GLN A 292 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE GLN A 293 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE MET A 294 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE GLY A 295 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE ARG A 296 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE GLY A 297 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE SER A 298 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE GLU A 299 UNP Q2TLC1 EXPRESSION TAG SEQADV 3ZPE PHE A 300 UNP Q2TLC1 EXPRESSION TAG SEQRES 1 A 190 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 190 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 A 190 GLY GLN GLN MET GLY ARG GLY SER GLU PHE ALA SER ILE SEQRES 4 A 190 GLY PRO PRO THR THR MET VAL THR GLY THR VAL SER PRO SEQRES 5 A 190 GLY ARG ALA THR ASN GLY GLN PHE VAL THR LYS THR ALA SEQRES 6 A 190 LYS VAL LEU ARG TYR LYS PHE VAL ARG TRP ASP ALA LEU SEQRES 7 A 190 LEU ILE ILE GLN PHE ILE ASP ASN ILE GLY VAL MET GLU SEQRES 8 A 190 ASN PRO THR PHE TYR ARG ASN LYS SER ILE GLU LEU ARG SEQRES 9 A 190 SER ALA ASP PHE LEU SER PRO MET LEU ASN ASN THR TYR SEQRES 10 A 190 ILE VAL PRO LEU ASN GLY GLY VAL ARG VAL GLU SER PRO SEQRES 11 A 190 THR ILE PRO VAL GLN LEU GLU VAL ILE LEU GLU ASN ASN SEQRES 12 A 190 SER SER PHE ILE GLN VAL GLY PHE VAL ARG LEU THR VAL SEQRES 13 A 190 LYS ASN GLY ASN PRO HIS MET ILE ILE GLN CYS ASN PRO SEQRES 14 A 190 VAL PRO GLY ASN ILE LYS MET ILE LYS ILE LYS SER VAL SEQRES 15 A 190 MET LEU PHE THR CYS LEU ILE GLY HET PO4 A1455 5 HETNAM PO4 PHOSPHATE ION FORMUL 2 PO4 O4 P 3- FORMUL 3 HOH *57(H2 O) HELIX 1 1 ALA A 370 PHE A 372 5 3 SHEET 1 AA10 ILE A 365 ARG A 368 0 SHEET 2 AA10 ILE A 438 ILE A 443 -1 O ILE A 441 N LEU A 367 SHEET 3 AA10 ILE A 396 LEU A 404 -1 O GLU A 401 N LYS A 442 SHEET 4 AA10 SER A 409 LYS A 421 -1 O PHE A 410 N VAL A 402 SHEET 5 AA10 ASN A 424 GLN A 430 -1 O ASN A 424 N LYS A 421 SHEET 6 AA10 THR A 380 GLY A 387 -1 O TYR A 381 N ILE A 429 SHEET 7 AA10 THR A 320 THR A 326 -1 O VAL A 325 N ASN A 386 SHEET 8 AA10 VAL A 331 ARG A 338 -1 O LEU A 332 N PHE A 324 SHEET 9 AA10 LEU A 342 PHE A 347 -1 O ILE A 344 N VAL A 337 SHEET 10 AA10 LEU A 448 LEU A 452 -1 O PHE A 449 N ILE A 345 SHEET 1 AB 2 VAL A 353 ASN A 356 0 SHEET 2 AB 2 PHE A 359 ARG A 361 -1 O PHE A 359 N GLU A 355 CISPEP 1 ASP A 340 ALA A 341 0 15.48 CISPEP 2 SER A 374 PRO A 375 0 -0.73 SITE 1 AC1 5 ARG A 368 LYS A 421 ASN A 422 LYS A 439 SITE 2 AC1 5 HOH A2049 CRYST1 98.570 98.570 98.570 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010145 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010145 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010145 0.00000