HEADER HYDROLASE/TRANSFERASE/DNA 25-JUL-11 3ZVM TITLE THE STRUCTURAL BASIS FOR SUBSTRATE RECOGNITION BY MAMMALIAN TITLE 2 POLYNUCLEOTIDE KINASE 3' PHOSPHATASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: POLYNUCLEOTIDE 3'-PHOSPHATASE AND POLYNUCLEOTIDE 5'- COMPND 5 HYDROXYL-KINASE DOMAINS, RESIDUES 111-522; COMPND 6 SYNONYM: DNA 5'-KINASE/3'-PHOSPHATASE, POLYNUCLEOTIDE KINASE-3'- COMPND 7 PHOSPHATASE, PNKP; COMPND 8 EC: 3.1.3.32, 2.7.1.78; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: 5'-D(*GP*TP*CP*AP*CP)-3'; COMPND 12 CHAIN: E, F; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA2 PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PTWO-E; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630 KEYWDS HYDROLASE-TRANSFERASE-DNA COMPLEX, BASE EXCISION REPAIR, BER, NON- KEYWDS 2 HOMOLOGOUS END-JOINING, NHEJ, DNA REPAIR, CANCER EXPDTA X-RAY DIFFRACTION AUTHOR F.GARCES,L.H.PEARL,A.W.OLIVER REVDAT 3 20-DEC-23 3ZVM 1 REMARK LINK REVDAT 2 07-MAR-18 3ZVM 1 SOURCE JRNL REVDAT 1 16-NOV-11 3ZVM 0 JRNL AUTH F.GARCES,L.H.PEARL,A.W.OLIVER JRNL TITL THE STRUCTURAL BASIS FOR SUBSTRATE RECOGNITION BY MAMMALIAN JRNL TITL 2 POLYNUCLEOTIDE KINASE 3' PHOSPHATASE. JRNL REF MOL. CELL V. 44 385 2011 JRNL REFN ISSN 1097-4164 JRNL PMID 22055185 JRNL DOI 10.1016/J.MOLCEL.2011.08.036 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 60655 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3071 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.4967 - 4.3008 1.00 5906 306 0.1504 0.1709 REMARK 3 2 4.3008 - 3.4143 1.00 5729 348 0.1287 0.1611 REMARK 3 3 3.4143 - 2.9829 1.00 5780 330 0.1452 0.2173 REMARK 3 4 2.9829 - 2.7103 1.00 5763 312 0.1569 0.2122 REMARK 3 5 2.7103 - 2.5160 1.00 5760 298 0.1530 0.2047 REMARK 3 6 2.5160 - 2.3677 1.00 5707 299 0.1588 0.2090 REMARK 3 7 2.3677 - 2.2492 1.00 5786 286 0.1538 0.2174 REMARK 3 8 2.2492 - 2.1513 1.00 5753 288 0.1633 0.2351 REMARK 3 9 2.1513 - 2.0684 1.00 5782 303 0.1654 0.2179 REMARK 3 10 2.0684 - 1.9971 0.98 5618 301 0.1690 0.2449 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 43.72 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.22 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.31450 REMARK 3 B22 (A**2) : -0.36670 REMARK 3 B33 (A**2) : 0.05220 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.12860 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6402 REMARK 3 ANGLE : 1.099 8718 REMARK 3 CHIRALITY : 0.067 936 REMARK 3 PLANARITY : 0.005 1111 REMARK 3 DIHEDRAL : 17.638 2395 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3ZVM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1290049159. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR-H REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PROTEUM2 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60655 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 38.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.120 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.75 REMARK 200 R MERGE FOR SHELL (I) : 0.31000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1YJ5 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.0, 18% (W/V) PEG REMARK 280 12000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.62150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 107 REMARK 465 PRO A 108 REMARK 465 HIS A 109 REMARK 465 MET A 110 REMARK 465 THR A 111 REMARK 465 SER A 112 REMARK 465 GLY A 113 REMARK 465 SER A 114 REMARK 465 GLN A 115 REMARK 465 PRO A 116 REMARK 465 ASP A 117 REMARK 465 ALA A 118 REMARK 465 PRO A 119 REMARK 465 PRO A 120 REMARK 465 ASP A 121 REMARK 465 THR A 122 REMARK 465 PRO A 123 REMARK 465 GLY A 124 REMARK 465 ASP A 125 REMARK 465 PRO A 126 REMARK 465 GLU A 127 REMARK 465 GLU A 128 REMARK 465 GLY A 129 REMARK 465 GLU A 130 REMARK 465 ASP A 131 REMARK 465 THR A 132 REMARK 465 GLU A 133 REMARK 465 PRO A 134 REMARK 465 GLN A 135 REMARK 465 LYS A 136 REMARK 465 LYS A 137 REMARK 465 ARG A 138 REMARK 465 VAL A 139 REMARK 465 ARG A 140 REMARK 465 LYS A 141 REMARK 465 SER A 142 REMARK 465 GLY B 107 REMARK 465 PRO B 108 REMARK 465 HIS B 109 REMARK 465 MET B 110 REMARK 465 THR B 111 REMARK 465 SER B 112 REMARK 465 GLY B 113 REMARK 465 SER B 114 REMARK 465 GLN B 115 REMARK 465 PRO B 116 REMARK 465 ASP B 117 REMARK 465 ALA B 118 REMARK 465 PRO B 119 REMARK 465 PRO B 120 REMARK 465 ASP B 121 REMARK 465 THR B 122 REMARK 465 PRO B 123 REMARK 465 GLY B 124 REMARK 465 ASP B 125 REMARK 465 PRO B 126 REMARK 465 GLU B 127 REMARK 465 GLU B 128 REMARK 465 GLY B 129 REMARK 465 GLU B 130 REMARK 465 ASP B 131 REMARK 465 THR B 132 REMARK 465 GLU B 133 REMARK 465 PRO B 134 REMARK 465 GLN B 135 REMARK 465 LYS B 136 REMARK 465 LYS B 137 REMARK 465 ARG B 138 REMARK 465 VAL B 139 REMARK 465 ARG B 140 REMARK 465 LYS B 141 REMARK 465 SER B 142 REMARK 465 SER B 143 REMARK 465 DG E -2 REMARK 465 DG F -2 REMARK 465 DT F -1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 143 OG REMARK 470 GLU A 281 CG CD OE1 OE2 REMARK 470 LEU B 144 CG CD1 CD2 REMARK 470 DT E -1 P OP1 OP2 O5' C5' C4' O4' REMARK 470 DT E -1 C2' C1' N1 C2 O2 N3 C4 REMARK 470 DT E -1 O4 C5 C7 C6 REMARK 470 DC F 0 P OP1 OP2 O5' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2530 O HOH A 2534 2.10 REMARK 500 O HOH A 2530 O HOH A 2538 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2470 O HOH B 2523 1455 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC F 2 C3' - C2' - C1' ANGL. DEV. = -5.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 144 123.62 -10.18 REMARK 500 LEU A 171 -72.46 -102.92 REMARK 500 THR A 174 -53.92 -122.99 REMARK 500 SER A 347 34.87 -87.19 REMARK 500 LEU B 149 -161.24 -110.82 REMARK 500 LEU B 171 -74.56 -97.75 REMARK 500 THR B 174 -55.05 -122.04 REMARK 500 ARG B 300 79.96 -119.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2137 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH A2175 DISTANCE = 6.14 ANGSTROMS REMARK 525 HOH A2276 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A2319 DISTANCE = 6.37 ANGSTROMS REMARK 525 HOH B2113 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH B2160 DISTANCE = 6.84 ANGSTROMS REMARK 525 HOH B2262 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH B2296 DISTANCE = 7.18 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1525 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 170 OD2 REMARK 620 2 ASP A 172 O 80.9 REMARK 620 3 ASP A 288 OD1 79.3 89.2 REMARK 620 4 HOH A2047 O 83.6 164.0 91.9 REMARK 620 5 HOH A2050 O 164.3 94.3 85.7 101.7 REMARK 620 6 DC E 2 OP1 120.4 92.4 160.2 92.0 74.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1526 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 378 OG REMARK 620 2 ASP A 396 OD2 91.6 REMARK 620 3 ADP A1523 O2B 89.1 179.1 REMARK 620 4 HOH A2423 O 89.2 88.2 92.4 REMARK 620 5 HOH A2424 O 88.6 89.1 90.4 176.4 REMARK 620 6 HOH A2460 O 177.6 89.0 90.4 88.4 93.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1525 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 170 OD2 REMARK 620 2 ASP B 172 O 84.0 REMARK 620 3 ASP B 288 OD1 81.5 90.0 REMARK 620 4 HOH B2032 O 91.9 174.6 92.8 REMARK 620 5 HOH B2034 O 88.7 90.9 170.1 85.5 REMARK 620 6 HOH B2035 O 165.0 91.6 84.1 93.2 105.7 REMARK 620 7 DC F 2 OP1 131.2 93.1 147.2 86.9 42.6 63.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1526 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 378 OG REMARK 620 2 ASP B 396 OD2 91.8 REMARK 620 3 ADP B1523 O3B 82.2 171.4 REMARK 620 4 HOH B2374 O 92.3 88.9 85.2 REMARK 620 5 HOH B2375 O 89.3 94.9 91.2 175.9 REMARK 620 6 HOH B2395 O 178.4 89.8 96.2 87.8 90.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 1523 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A 1524 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1525 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1526 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1527 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1528 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1529 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1530 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 1523 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE B 1524 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1525 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1526 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1527 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1528 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1529 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1530 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 1531 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 1532 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1UJX RELATED DB: PDB REMARK 900 THE FORKHEAD ASSOCIATED (FHA) DOMAIN LIKE STRUCTURE FROMMOUSE REMARK 900 POLYNUCLEOTIDE KINASE 3'-PHOSPHATASE REMARK 900 RELATED ID: 3ZVL RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR SUBSTRATE RECOGNITION BY MAMMALIAN REMARK 900 POLYNUCLEOTIDE KINASE 3' PHOSPHATASE REMARK 900 RELATED ID: 1YJ5 RELATED DB: PDB REMARK 900 MOLECULAR ARCHITECTURE OF MAMMALIAN POLYNUCLEOTIDE KINASE, A DNA REMARK 900 REPAIR ENZYME REMARK 900 RELATED ID: 1YJM RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE FHA DOMAIN OF MOUSE POLYNUCLEOTIDEKINASE REMARK 900 IN COMPLEX WITH AN XRCC4-DERIVED PHOSPHOPEPTIDE. REMARK 900 RELATED ID: 3ZVN RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR SUBSTRATE RECOGNITION BY MAMMALIAN REMARK 900 POLYNUCLEOTIDE KINASE 3' PHOSPHATASE DBREF 3ZVM A 111 522 UNP Q9JLV6 PNKP_MOUSE 111 522 DBREF 3ZVM B 111 522 UNP Q9JLV6 PNKP_MOUSE 111 522 DBREF 3ZVM E -2 2 PDB 3ZVM 3ZVM -2 2 DBREF 3ZVM F -2 2 PDB 3ZVM 3ZVM -2 2 SEQADV 3ZVM GLY A 107 UNP Q9JLV6 EXPRESSION TAG SEQADV 3ZVM PRO A 108 UNP Q9JLV6 EXPRESSION TAG SEQADV 3ZVM HIS A 109 UNP Q9JLV6 EXPRESSION TAG SEQADV 3ZVM MET A 110 UNP Q9JLV6 EXPRESSION TAG SEQADV 3ZVM GLY B 107 UNP Q9JLV6 EXPRESSION TAG SEQADV 3ZVM PRO B 108 UNP Q9JLV6 EXPRESSION TAG SEQADV 3ZVM HIS B 109 UNP Q9JLV6 EXPRESSION TAG SEQADV 3ZVM MET B 110 UNP Q9JLV6 EXPRESSION TAG SEQRES 1 A 416 GLY PRO HIS MET THR SER GLY SER GLN PRO ASP ALA PRO SEQRES 2 A 416 PRO ASP THR PRO GLY ASP PRO GLU GLU GLY GLU ASP THR SEQRES 3 A 416 GLU PRO GLN LYS LYS ARG VAL ARG LYS SER SER LEU GLY SEQRES 4 A 416 TRP GLU SER LEU LYS LYS LEU LEU VAL PHE THR ALA SER SEQRES 5 A 416 GLY VAL LYS PRO GLN GLY LYS VAL ALA ALA PHE ASP LEU SEQRES 6 A 416 ASP GLY THR LEU ILE THR THR ARG SER GLY LYS VAL PHE SEQRES 7 A 416 PRO THR SER PRO SER ASP TRP ARG ILE LEU TYR PRO GLU SEQRES 8 A 416 ILE PRO LYS LYS LEU GLN GLU LEU ALA ALA GLU GLY TYR SEQRES 9 A 416 LYS LEU VAL ILE PHE THR ASN GLN MET GLY ILE GLY ARG SEQRES 10 A 416 GLY LYS LEU PRO ALA GLU VAL PHE LYS GLY LYS VAL GLU SEQRES 11 A 416 ALA VAL LEU GLU LYS LEU GLY VAL PRO PHE GLN VAL LEU SEQRES 12 A 416 VAL ALA THR HIS ALA GLY LEU ASN ARG LYS PRO VAL SER SEQRES 13 A 416 GLY MET TRP ASP HIS LEU GLN GLU GLN ALA ASN GLU GLY SEQRES 14 A 416 ILE PRO ILE SER VAL GLU ASP SER VAL PHE VAL GLY ASP SEQRES 15 A 416 ALA ALA GLY ARG LEU ALA ASN TRP ALA PRO GLY ARG LYS SEQRES 16 A 416 LYS LYS ASP PHE SER CYS ALA ASP ARG LEU PHE ALA LEU SEQRES 17 A 416 ASN VAL GLY LEU PRO PHE ALA THR PRO GLU GLU PHE PHE SEQRES 18 A 416 LEU LYS TRP PRO ALA ALA ARG PHE GLU LEU PRO ALA PHE SEQRES 19 A 416 ASP PRO ARG THR ILE SER SER ALA GLY PRO LEU TYR LEU SEQRES 20 A 416 PRO GLU SER SER SER LEU LEU SER PRO ASN PRO GLU VAL SEQRES 21 A 416 VAL VAL ALA VAL GLY PHE PRO GLY ALA GLY LYS SER THR SEQRES 22 A 416 PHE ILE GLN GLU HIS LEU VAL SER ALA GLY TYR VAL HIS SEQRES 23 A 416 VAL ASN ARG ASP THR LEU GLY SER TRP GLN ARG CYS VAL SEQRES 24 A 416 SER SER CYS GLN ALA ALA LEU ARG GLN GLY LYS ARG VAL SEQRES 25 A 416 VAL ILE ASP ASN THR ASN PRO ASP VAL PRO SER ARG ALA SEQRES 26 A 416 ARG TYR ILE GLN CYS ALA LYS ASP ALA GLY VAL PRO CYS SEQRES 27 A 416 ARG CYS PHE ASN PHE CYS ALA THR ILE GLU GLN ALA ARG SEQRES 28 A 416 HIS ASN ASN ARG PHE ARG GLU MET THR ASP PRO SER HIS SEQRES 29 A 416 ALA PRO VAL SER ASP MET VAL MET PHE SER TYR ARG LYS SEQRES 30 A 416 GLN PHE GLU PRO PRO THR LEU ALA GLU GLY PHE LEU GLU SEQRES 31 A 416 ILE LEU GLU ILE PRO PHE ARG LEU GLN GLU HIS LEU ASP SEQRES 32 A 416 PRO ALA LEU GLN ARG LEU TYR ARG GLN PHE SER GLU GLY SEQRES 1 B 416 GLY PRO HIS MET THR SER GLY SER GLN PRO ASP ALA PRO SEQRES 2 B 416 PRO ASP THR PRO GLY ASP PRO GLU GLU GLY GLU ASP THR SEQRES 3 B 416 GLU PRO GLN LYS LYS ARG VAL ARG LYS SER SER LEU GLY SEQRES 4 B 416 TRP GLU SER LEU LYS LYS LEU LEU VAL PHE THR ALA SER SEQRES 5 B 416 GLY VAL LYS PRO GLN GLY LYS VAL ALA ALA PHE ASP LEU SEQRES 6 B 416 ASP GLY THR LEU ILE THR THR ARG SER GLY LYS VAL PHE SEQRES 7 B 416 PRO THR SER PRO SER ASP TRP ARG ILE LEU TYR PRO GLU SEQRES 8 B 416 ILE PRO LYS LYS LEU GLN GLU LEU ALA ALA GLU GLY TYR SEQRES 9 B 416 LYS LEU VAL ILE PHE THR ASN GLN MET GLY ILE GLY ARG SEQRES 10 B 416 GLY LYS LEU PRO ALA GLU VAL PHE LYS GLY LYS VAL GLU SEQRES 11 B 416 ALA VAL LEU GLU LYS LEU GLY VAL PRO PHE GLN VAL LEU SEQRES 12 B 416 VAL ALA THR HIS ALA GLY LEU ASN ARG LYS PRO VAL SER SEQRES 13 B 416 GLY MET TRP ASP HIS LEU GLN GLU GLN ALA ASN GLU GLY SEQRES 14 B 416 ILE PRO ILE SER VAL GLU ASP SER VAL PHE VAL GLY ASP SEQRES 15 B 416 ALA ALA GLY ARG LEU ALA ASN TRP ALA PRO GLY ARG LYS SEQRES 16 B 416 LYS LYS ASP PHE SER CYS ALA ASP ARG LEU PHE ALA LEU SEQRES 17 B 416 ASN VAL GLY LEU PRO PHE ALA THR PRO GLU GLU PHE PHE SEQRES 18 B 416 LEU LYS TRP PRO ALA ALA ARG PHE GLU LEU PRO ALA PHE SEQRES 19 B 416 ASP PRO ARG THR ILE SER SER ALA GLY PRO LEU TYR LEU SEQRES 20 B 416 PRO GLU SER SER SER LEU LEU SER PRO ASN PRO GLU VAL SEQRES 21 B 416 VAL VAL ALA VAL GLY PHE PRO GLY ALA GLY LYS SER THR SEQRES 22 B 416 PHE ILE GLN GLU HIS LEU VAL SER ALA GLY TYR VAL HIS SEQRES 23 B 416 VAL ASN ARG ASP THR LEU GLY SER TRP GLN ARG CYS VAL SEQRES 24 B 416 SER SER CYS GLN ALA ALA LEU ARG GLN GLY LYS ARG VAL SEQRES 25 B 416 VAL ILE ASP ASN THR ASN PRO ASP VAL PRO SER ARG ALA SEQRES 26 B 416 ARG TYR ILE GLN CYS ALA LYS ASP ALA GLY VAL PRO CYS SEQRES 27 B 416 ARG CYS PHE ASN PHE CYS ALA THR ILE GLU GLN ALA ARG SEQRES 28 B 416 HIS ASN ASN ARG PHE ARG GLU MET THR ASP PRO SER HIS SEQRES 29 B 416 ALA PRO VAL SER ASP MET VAL MET PHE SER TYR ARG LYS SEQRES 30 B 416 GLN PHE GLU PRO PRO THR LEU ALA GLU GLY PHE LEU GLU SEQRES 31 B 416 ILE LEU GLU ILE PRO PHE ARG LEU GLN GLU HIS LEU ASP SEQRES 32 B 416 PRO ALA LEU GLN ARG LEU TYR ARG GLN PHE SER GLU GLY SEQRES 1 E 5 DG DT DC DA DC SEQRES 1 F 5 DG DT DC DA DC HET ADP A1523 27 HET EPE A1524 15 HET MG A1525 1 HET MG A1526 1 HET GOL A1527 6 HET GOL A1528 6 HET GOL A1529 6 HET GOL A1530 6 HET ADP B1523 27 HET EPE B1524 15 HET MG B1525 1 HET MG B1526 1 HET GOL B1527 6 HET GOL B1528 6 HET GOL B1529 6 HET GOL B1530 6 HET ACT B1531 4 HET ACT B1532 4 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETNAM ACT ACETATE ION HETSYN EPE HEPES HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 ADP 2(C10 H15 N5 O10 P2) FORMUL 6 EPE 2(C8 H18 N2 O4 S) FORMUL 7 MG 4(MG 2+) FORMUL 9 GOL 8(C3 H8 O3) FORMUL 21 ACT 2(C2 H3 O2 1-) FORMUL 23 HOH *1196(H2 O) HELIX 1 1 GLU A 197 GLU A 208 1 12 HELIX 2 2 GLN A 218 ARG A 223 1 6 HELIX 3 3 PRO A 227 GLY A 243 1 17 HELIX 4 4 SER A 262 ALA A 272 1 11 HELIX 5 5 CYS A 307 GLY A 317 1 11 HELIX 6 6 THR A 322 LYS A 329 1 8 HELIX 7 7 ASP A 341 ILE A 345 5 5 HELIX 8 8 GLY A 376 LEU A 385 1 10 HELIX 9 9 VAL A 386 GLY A 389 5 4 HELIX 10 10 ARG A 395 GLY A 399 1 5 HELIX 11 11 SER A 400 GLN A 414 1 15 HELIX 12 12 ASP A 426 GLY A 441 1 16 HELIX 13 13 THR A 452 ASP A 467 1 16 HELIX 14 14 SER A 474 PHE A 485 1 12 HELIX 15 15 THR A 489 GLY A 493 5 5 HELIX 16 16 ASP A 509 ARG A 517 1 9 HELIX 17 17 GLU B 197 GLU B 208 1 12 HELIX 18 18 GLN B 218 ARG B 223 1 6 HELIX 19 19 PRO B 227 GLY B 243 1 17 HELIX 20 20 SER B 262 GLN B 271 1 10 HELIX 21 21 CYS B 307 GLY B 317 1 11 HELIX 22 22 THR B 322 LYS B 329 1 8 HELIX 23 23 ASP B 341 ILE B 345 5 5 HELIX 24 24 GLY B 376 LEU B 385 1 10 HELIX 25 25 VAL B 386 GLY B 389 5 4 HELIX 26 26 ARG B 395 GLY B 399 1 5 HELIX 27 27 SER B 400 GLN B 414 1 15 HELIX 28 28 ASP B 426 GLY B 441 1 16 HELIX 29 29 THR B 452 ASP B 467 1 16 HELIX 30 30 SER B 474 PHE B 485 1 12 HELIX 31 31 THR B 489 GLY B 493 5 5 HELIX 32 32 ASP B 509 ARG B 517 1 9 SHEET 1 AA 7 GLY A 145 LEU A 149 0 SHEET 2 AA 7 LEU A 152 THR A 156 -1 O LEU A 152 N LEU A 149 SHEET 3 AA 7 GLN A 247 ALA A 251 -1 O VAL A 248 N PHE A 155 SHEET 4 AA 7 LYS A 211 ASN A 217 1 O LEU A 212 N GLN A 247 SHEET 5 AA 7 VAL A 166 PHE A 169 1 O ALA A 167 N VAL A 213 SHEET 6 AA 7 VAL A 284 VAL A 286 1 O VAL A 284 N ALA A 168 SHEET 7 AA 7 PHE A 320 ALA A 321 1 N ALA A 321 O PHE A 285 SHEET 1 AB 2 ILE A 176 THR A 177 0 SHEET 2 AB 2 ARG A 192 ILE A 193 -1 O ARG A 192 N THR A 177 SHEET 1 AC 5 VAL A 391 ASN A 394 0 SHEET 2 AC 5 VAL A 418 ASP A 421 1 O VAL A 419 N VAL A 393 SHEET 3 AC 5 VAL A 366 VAL A 370 1 O VAL A 367 N ILE A 420 SHEET 4 AC 5 CYS A 444 PHE A 449 1 O ARG A 445 N VAL A 368 SHEET 5 AC 5 GLU A 496 ILE A 500 1 O GLU A 496 N CYS A 446 SHEET 1 BA 7 TRP B 146 LEU B 149 0 SHEET 2 BA 7 LEU B 152 THR B 156 -1 O LEU B 152 N LEU B 149 SHEET 3 BA 7 GLN B 247 ALA B 251 -1 O VAL B 248 N PHE B 155 SHEET 4 BA 7 LYS B 211 ASN B 217 1 O LEU B 212 N GLN B 247 SHEET 5 BA 7 VAL B 166 PHE B 169 1 O ALA B 167 N VAL B 213 SHEET 6 BA 7 VAL B 284 VAL B 286 1 O VAL B 284 N ALA B 168 SHEET 7 BA 7 PHE B 320 ALA B 321 1 N ALA B 321 O PHE B 285 SHEET 1 BB 2 ILE B 176 THR B 177 0 SHEET 2 BB 2 ARG B 192 ILE B 193 -1 O ARG B 192 N THR B 177 SHEET 1 BC 5 VAL B 391 ASN B 394 0 SHEET 2 BC 5 VAL B 418 ASP B 421 1 O VAL B 419 N VAL B 393 SHEET 3 BC 5 VAL B 366 VAL B 370 1 O VAL B 367 N ILE B 420 SHEET 4 BC 5 CYS B 444 PHE B 449 1 O ARG B 445 N VAL B 368 SHEET 5 BC 5 GLU B 496 ILE B 500 1 O GLU B 496 N CYS B 446 LINK OD2 ASP A 170 MG MG A1525 1555 1555 2.22 LINK O ASP A 172 MG MG A1525 1555 1555 2.26 LINK OD1 ASP A 288 MG MG A1525 1555 1555 2.37 LINK OG SER A 378 MG MG A1526 1555 1555 2.30 LINK OD2 ASP A 396 MG MG A1526 1555 1555 2.31 LINK O2B ADP A1523 MG MG A1526 1555 1555 2.15 LINK MG MG A1525 O HOH A2047 1555 1555 2.27 LINK MG MG A1525 O HOH A2050 1555 1555 2.35 LINK MG MG A1525 OP1 DC E 2 1555 1555 2.66 LINK MG MG A1526 O HOH A2423 1555 1555 2.29 LINK MG MG A1526 O HOH A2424 1555 1555 2.19 LINK MG MG A1526 O HOH A2460 1555 1555 2.27 LINK OD2 ASP B 170 MG MG B1525 1555 1555 2.22 LINK O ASP B 172 MG MG B1525 1555 1555 2.28 LINK OD1 ASP B 288 MG MG B1525 1555 1555 2.32 LINK OG SER B 378 MG MG B1526 1555 1555 2.26 LINK OD2 ASP B 396 MG MG B1526 1555 1555 2.19 LINK O3B ADP B1523 MG MG B1526 1555 1555 2.29 LINK MG MG B1525 O HOH B2032 1555 1555 2.28 LINK MG MG B1525 O HOH B2034 1555 1555 2.38 LINK MG MG B1525 O HOH B2035 1555 1555 2.44 LINK MG MG B1525 OP1 DC F 2 1555 1555 2.84 LINK MG MG B1526 O HOH B2374 1555 1555 2.34 LINK MG MG B1526 O HOH B2375 1555 1555 2.25 LINK MG MG B1526 O HOH B2395 1555 1555 2.27 CISPEP 1 LYS A 259 PRO A 260 0 12.16 CISPEP 2 LEU A 353 PRO A 354 0 -2.12 CISPEP 3 LYS B 259 PRO B 260 0 10.61 CISPEP 4 LEU B 353 PRO B 354 0 -1.78 SITE 1 AC1 22 PHE A 372 GLY A 374 ALA A 375 GLY A 376 SITE 2 AC1 22 LYS A 377 SER A 378 THR A 379 ASN A 459 SITE 3 AC1 22 PHE A 462 ARG A 463 PHE A 502 ARG A 503 SITE 4 AC1 22 LEU A 504 GLN A 505 MG A1526 HOH A2420 SITE 5 AC1 22 HOH A2424 HOH A2426 HOH A2460 HOH A2551 SITE 6 AC1 22 HOH A2625 HOH A2626 SITE 1 AC2 14 PRO A 373 ARG A 395 ASP A 396 TRP A 401 SITE 2 AC2 14 ASN A 422 HIS A 470 HOH A2454 HOH A2457 SITE 3 AC2 14 HOH A2458 HOH A2460 HOH A2490 HOH A2498 SITE 4 AC2 14 HOH A2499 HOH A2629 SITE 1 AC3 6 ASP A 170 ASP A 172 ASP A 288 HOH A2047 SITE 2 AC3 6 HOH A2050 DC E 2 SITE 1 AC4 6 SER A 378 ASP A 396 ADP A1523 HOH A2423 SITE 2 AC4 6 HOH A2424 HOH A2460 SITE 1 AC5 4 GLU A 197 LEU A 328 HOH A2088 HOH A2089 SITE 1 AC6 11 ALA A 254 GLY A 255 ARG A 258 LYS A 259 SITE 2 AC6 11 PRO A 260 VAL A 261 MET A 465 SER A 520 SITE 3 AC6 11 HOH A2207 HOH A2539 HOH A2630 SITE 1 AC7 6 ARG A 179 SER A 189 TRP A 191 LYS A 241 SITE 2 AC7 6 HOH A2064 HOH A2632 SITE 1 AC8 9 GLY A 159 VAL A 160 LYS A 161 GLN A 163 SITE 2 AC8 9 TYR A 210 LYS A 211 LEU A 212 HOH A2125 SITE 3 AC8 9 HOH A2184 SITE 1 AC9 21 GLY B 374 ALA B 375 GLY B 376 LYS B 377 SITE 2 AC9 21 SER B 378 THR B 379 ASN B 459 PHE B 462 SITE 3 AC9 21 ARG B 463 PHE B 502 ARG B 503 GLN B 505 SITE 4 AC9 21 HIS B 507 TYR B 516 MG B1526 HOH B2372 SITE 5 AC9 21 HOH B2374 HOH B2376 HOH B2395 HOH B2468 SITE 6 AC9 21 HOH B2545 SITE 1 BC1 17 ARG B 395 ASP B 396 TRP B 401 ASN B 422 SITE 2 BC1 17 HIS B 470 HOH B2144 HOH B2373 HOH B2392 SITE 3 BC1 17 HOH B2394 HOH B2395 HOH B2396 HOH B2402 SITE 4 BC1 17 HOH B2418 HOH B2424 HOH B2425 HOH B2458 SITE 5 BC1 17 HOH B2547 SITE 1 BC2 7 ASP B 170 ASP B 172 ASP B 288 HOH B2032 SITE 2 BC2 7 HOH B2034 HOH B2035 DC F 2 SITE 1 BC3 6 SER B 378 ASP B 396 ADP B1523 HOH B2374 SITE 2 BC3 6 HOH B2375 HOH B2395 SITE 1 BC4 7 PRO B 338 PHE B 340 HIS B 458 ARG B 461 SITE 2 BC4 7 PHE B 519 SER B 520 GLU B 521 SITE 1 BC5 7 PRO B 188 TRP B 191 LYS B 234 ALA B 237 SITE 2 BC5 7 HOH B2058 HOH B2116 HOH B2121 SITE 1 BC6 6 LYS A 438 GLY A 441 ARG B 179 SER B 189 SITE 2 BC6 6 TRP B 191 HOH B2549 SITE 1 BC7 7 ALA B 297 PRO B 298 TRP B 330 HOH B2229 SITE 2 BC7 7 HOH B2231 HOH B2550 HOH B2551 SITE 1 BC8 5 LYS B 150 ASN B 257 HIS B 267 HOH B2159 SITE 2 BC8 5 HOH B2178 SITE 1 BC9 4 ARG B 432 CYS B 436 HOH B2431 HOH B2518 CRYST1 44.817 75.243 135.199 90.00 96.30 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022313 0.000000 0.002463 0.00000 SCALE2 0.000000 0.013290 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007441 0.00000