HEADER HYDROLASE 02-AUG-11 3ZWQ TITLE HYPERTHERMOPHILIC ESTERASE FROM THE ARCHEON PYROBACULUM CALIDIFONTIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA/BETA HYDROLASE FOLD-3 DOMAIN PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PESTE; COMPND 5 EC: 3.1.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROBACULUM CALIDIFONTIS; SOURCE 3 ORGANISM_TAXID: 410359; SOURCE 4 STRAIN: VA1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET21A KEYWDS HYPERTHERMOPHILIC ENZYME, ESTERASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.J.PALM,X.BOGDANOVIC,W.HINRICHS REVDAT 3 20-DEC-23 3ZWQ 1 REMARK REVDAT 2 04-MAR-15 3ZWQ 1 REMARK REVDAT 1 17-AUG-11 3ZWQ 0 SPRSDE 17-AUG-11 3ZWQ 2WIR JRNL AUTH G.J.PALM,E.FERNANDEZ-ALVARO,X.BOGDANOVIC,S.BARTSCH, JRNL AUTH 2 J.SCZODROK,R.K.SINGH,D.BOETTCHER,H.ATOMI,U.T.BORNSCHEUER, JRNL AUTH 3 W.HINRICHS JRNL TITL THE CRYSTAL STRUCTURE OF AN ESTERASE FROM THE JRNL TITL 2 HYPERTHERMOPHILIC MICROORGANISM PYROBACULUM CALIDIFONTIS VA1 JRNL TITL 3 SUPPORTS EXPLANATION OF ITS ENANTIOSELECTIVITY. JRNL REF APPL.MICROBIOL.BIOTECHNOL. V. 91 1061 2011 JRNL REFN ISSN 0175-7598 JRNL PMID 21614503 JRNL DOI 10.1007/S00253-011-3337-9 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Y.HOTTA,S.EZAKI,H.ATOMI,T.IMANAKA REMARK 1 TITL EXTREMELY STABLE AND VERSATILE CARBOXYLESTERASE FROM A REMARK 1 TITL 2 HYPERTHERMOPHILIC ARCHAEON. REMARK 1 REF APPL.ENVIRON.MICROBIOL. V. 68 3925 2002 REMARK 1 REFN ISSN 0099-2240 REMARK 1 PMID 12147492 REMARK 1 DOI 10.1128/AEM.68.8.3925-3931.2002 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 127.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 3 NUMBER OF REFLECTIONS : 43950 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2351 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2013 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 57.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.3200 REMARK 3 BIN FREE R VALUE SET COUNT : 101 REMARK 3 BIN FREE R VALUE : 0.3360 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4787 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 246 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.45000 REMARK 3 B22 (A**2) : -1.13000 REMARK 3 B33 (A**2) : 2.59000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.199 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.168 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.129 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.594 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4935 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3350 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6723 ; 1.149 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8129 ; 0.848 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 625 ; 5.489 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 221 ;29.375 ;22.896 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 785 ;13.364 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 44 ;13.726 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 750 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5566 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1030 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3103 ; 0.431 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1248 ; 0.107 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5005 ; 0.767 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1832 ; 1.247 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1715 ; 1.961 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 18 REMARK 3 ORIGIN FOR THE GROUP (A): -7.3550 -9.0280 19.2670 REMARK 3 T TENSOR REMARK 3 T11: 0.3870 T22: 0.2992 REMARK 3 T33: 0.7324 T12: 0.1768 REMARK 3 T13: -0.3162 T23: -0.1975 REMARK 3 L TENSOR REMARK 3 L11: 17.1499 L22: 17.3304 REMARK 3 L33: 18.9318 L12: -6.3396 REMARK 3 L13: -5.1688 L23: 1.7983 REMARK 3 S TENSOR REMARK 3 S11: -0.9204 S12: -0.1570 S13: -0.2809 REMARK 3 S21: 1.1046 S22: 0.8545 S23: -2.1802 REMARK 3 S31: 1.1938 S32: 1.4025 S33: 0.0658 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 19 A 34 REMARK 3 ORIGIN FOR THE GROUP (A): -4.0010 -7.6520 0.2240 REMARK 3 T TENSOR REMARK 3 T11: 0.1954 T22: 0.4614 REMARK 3 T33: 0.3975 T12: -0.2222 REMARK 3 T13: -0.0476 T23: 0.0714 REMARK 3 L TENSOR REMARK 3 L11: 6.8882 L22: 13.6366 REMARK 3 L33: 0.8977 L12: 3.2055 REMARK 3 L13: -1.6489 L23: 0.3682 REMARK 3 S TENSOR REMARK 3 S11: 0.1863 S12: -0.3173 S13: -0.0144 REMARK 3 S21: -0.0252 S22: -0.2860 S23: -0.8932 REMARK 3 S31: -0.2833 S32: 0.4532 S33: 0.0997 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 35 A 147 REMARK 3 ORIGIN FOR THE GROUP (A): -16.0160 -27.7280 0.9270 REMARK 3 T TENSOR REMARK 3 T11: 0.0838 T22: 0.1135 REMARK 3 T33: 0.2475 T12: -0.0106 REMARK 3 T13: 0.0334 T23: -0.0456 REMARK 3 L TENSOR REMARK 3 L11: 1.7923 L22: 2.6727 REMARK 3 L33: 1.4701 L12: -0.6201 REMARK 3 L13: -0.0148 L23: -0.7443 REMARK 3 S TENSOR REMARK 3 S11: -0.1060 S12: 0.1457 S13: -0.1838 REMARK 3 S21: -0.1766 S22: 0.1374 S23: -0.1014 REMARK 3 S31: 0.1286 S32: 0.1143 S33: -0.0315 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 148 A 225 REMARK 3 ORIGIN FOR THE GROUP (A): -23.3890 -12.4690 1.1800 REMARK 3 T TENSOR REMARK 3 T11: 0.0922 T22: 0.0854 REMARK 3 T33: 0.2484 T12: -0.0200 REMARK 3 T13: 0.0185 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 1.6407 L22: 2.0893 REMARK 3 L33: 1.3075 L12: 0.5129 REMARK 3 L13: 0.2587 L23: 0.3988 REMARK 3 S TENSOR REMARK 3 S11: -0.1254 S12: 0.1360 S13: 0.0501 REMARK 3 S21: -0.2013 S22: 0.1396 S23: -0.1258 REMARK 3 S31: -0.1383 S32: 0.0732 S33: -0.0141 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 226 A 313 REMARK 3 ORIGIN FOR THE GROUP (A): -27.3130 -14.8540 9.1500 REMARK 3 T TENSOR REMARK 3 T11: 0.0908 T22: 0.0704 REMARK 3 T33: 0.2157 T12: 0.0221 REMARK 3 T13: 0.0180 T23: -0.0103 REMARK 3 L TENSOR REMARK 3 L11: 1.6724 L22: 2.3374 REMARK 3 L33: 0.9602 L12: 0.0148 REMARK 3 L13: 0.3444 L23: 0.1531 REMARK 3 S TENSOR REMARK 3 S11: -0.1508 S12: -0.0149 S13: 0.0512 REMARK 3 S21: 0.1275 S22: 0.0993 S23: 0.1857 REMARK 3 S31: -0.0364 S32: 0.0308 S33: 0.0516 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 24 REMARK 3 ORIGIN FOR THE GROUP (A): -51.1500 -15.7290 18.7400 REMARK 3 T TENSOR REMARK 3 T11: 0.2704 T22: 0.3011 REMARK 3 T33: 0.8500 T12: -0.0610 REMARK 3 T13: -0.0368 T23: -0.2389 REMARK 3 L TENSOR REMARK 3 L11: 7.4801 L22: 5.9463 REMARK 3 L33: 15.2791 L12: -4.6513 REMARK 3 L13: -8.8985 L23: 1.8418 REMARK 3 S TENSOR REMARK 3 S11: 0.0082 S12: 0.4550 S13: -0.6538 REMARK 3 S21: -0.3506 S22: -0.4108 S23: 1.0246 REMARK 3 S31: 0.5134 S32: -0.5471 S33: 0.4025 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 25 B 77 REMARK 3 ORIGIN FOR THE GROUP (A): -41.7550 -32.6140 34.7990 REMARK 3 T TENSOR REMARK 3 T11: 0.5951 T22: 0.1649 REMARK 3 T33: 0.3477 T12: -0.0651 REMARK 3 T13: 0.3156 T23: 0.1082 REMARK 3 L TENSOR REMARK 3 L11: 4.4364 L22: 5.1081 REMARK 3 L33: 2.7673 L12: -0.0749 REMARK 3 L13: -0.3401 L23: -0.3304 REMARK 3 S TENSOR REMARK 3 S11: -0.0694 S12: -0.3504 S13: -0.1958 REMARK 3 S21: 1.1155 S22: -0.0873 S23: 0.4866 REMARK 3 S31: 0.5094 S32: -0.2176 S33: 0.1567 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 78 B 125 REMARK 3 ORIGIN FOR THE GROUP (A): -39.0240 -26.4000 36.6320 REMARK 3 T TENSOR REMARK 3 T11: 0.6281 T22: 0.2517 REMARK 3 T33: 0.2267 T12: 0.0179 REMARK 3 T13: 0.2589 T23: 0.1449 REMARK 3 L TENSOR REMARK 3 L11: 2.6857 L22: 2.0341 REMARK 3 L33: 2.7916 L12: -1.0418 REMARK 3 L13: -1.4837 L23: 0.5352 REMARK 3 S TENSOR REMARK 3 S11: -0.1751 S12: -0.5000 S13: -0.3877 REMARK 3 S21: 0.9626 S22: 0.1682 S23: 0.4017 REMARK 3 S31: 0.2000 S32: 0.0335 S33: 0.0068 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 126 B 196 REMARK 3 ORIGIN FOR THE GROUP (A): -28.2510 -24.0030 39.9430 REMARK 3 T TENSOR REMARK 3 T11: 0.7569 T22: 0.3695 REMARK 3 T33: 0.1157 T12: 0.1184 REMARK 3 T13: 0.0460 T23: 0.1365 REMARK 3 L TENSOR REMARK 3 L11: 3.4144 L22: 5.4719 REMARK 3 L33: 1.7068 L12: -1.1132 REMARK 3 L13: 0.9393 L23: 0.4350 REMARK 3 S TENSOR REMARK 3 S11: -0.0141 S12: -0.6529 S13: -0.3406 REMARK 3 S21: 1.2901 S22: 0.2052 S23: -0.2680 REMARK 3 S31: 0.2180 S32: -0.0936 S33: -0.1911 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 197 B 210 REMARK 3 ORIGIN FOR THE GROUP (A): -43.7740 -5.1590 27.8170 REMARK 3 T TENSOR REMARK 3 T11: 0.2398 T22: 0.1219 REMARK 3 T33: 0.2917 T12: 0.0077 REMARK 3 T13: 0.1502 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 14.8082 L22: 8.0557 REMARK 3 L33: 8.9105 L12: -2.3154 REMARK 3 L13: -2.6423 L23: -1.0843 REMARK 3 S TENSOR REMARK 3 S11: -0.3382 S12: -0.3640 S13: -0.5142 REMARK 3 S21: 0.6390 S22: -0.0233 S23: 0.8177 REMARK 3 S31: 0.3401 S32: -0.6085 S33: 0.3615 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 211 B 313 REMARK 3 ORIGIN FOR THE GROUP (A): -31.8790 -14.7360 31.3120 REMARK 3 T TENSOR REMARK 3 T11: 0.4533 T22: 0.2262 REMARK 3 T33: 0.1101 T12: 0.0844 REMARK 3 T13: 0.0964 T23: 0.0692 REMARK 3 L TENSOR REMARK 3 L11: 1.3560 L22: 3.3345 REMARK 3 L33: 1.3086 L12: -0.4028 REMARK 3 L13: -0.4486 L23: 0.8966 REMARK 3 S TENSOR REMARK 3 S11: -0.2006 S12: -0.3694 S13: -0.1083 REMARK 3 S21: 0.9634 S22: 0.1566 S23: 0.1830 REMARK 3 S31: 0.1280 S32: 0.0303 S33: 0.0439 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED. REMARK 4 REMARK 4 3ZWQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1290048797. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC MULTILAYER REMARK 200 OPTICS : OSMIC MULTILAYER REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46646 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 44.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 59.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2C7B REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 UL PROTEIN (IN 20 MM TRIS PH 8.0) REMARK 280 PLUS 2 UL RESERVOIR (30% MPD, 10% PEG 6000, 0.1 M NAOAC)., PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 30.95950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 63.63550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.95950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 63.63550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -61.91900 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA B 15 REMARK 465 ALA B 16 REMARK 465 GLN B 17 REMARK 465 LEU B 18 REMARK 465 GLN B 19 REMARK 465 PHE B 20 REMARK 465 ARG B 21 REMARK 465 PRO B 22 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 16 55.90 -106.04 REMARK 500 LEU A 18 89.31 54.16 REMARK 500 SER A 157 -116.07 62.19 REMARK 500 TYR A 185 63.77 31.65 REMARK 500 VAL A 207 -54.66 67.38 REMARK 500 LEU A 209 87.85 -152.28 REMARK 500 SER A 234 79.95 -115.12 REMARK 500 TYR A 253 57.96 -107.67 REMARK 500 PHE B 87 -3.60 72.10 REMARK 500 TYR B 141 -50.54 -28.89 REMARK 500 SER B 157 -114.76 62.06 REMARK 500 TYR B 185 63.68 28.62 REMARK 500 VAL B 207 -56.88 65.74 REMARK 500 SER B 234 78.22 -115.74 REMARK 500 TYR B 253 67.42 -101.44 REMARK 500 MET B 310 54.08 37.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: ASA REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ACTIVE SITE MONOMER A WITH CATALYTIC TRIAD (SER REMARK 800 157, HIS 284, ASP 254) AND OXYANION HOLE (ALA 158, GLY 85, GLY REMARK 800 86) DBREF 3ZWQ A 1 313 UNP A3MVR4 A3MVR4_PYRCJ 1 313 DBREF 3ZWQ B 1 313 UNP A3MVR4 A3MVR4_PYRCJ 1 313 SEQRES 1 A 313 MET PRO LEU SER PRO ILE LEU ARG GLN ILE LEU GLN GLN SEQRES 2 A 313 LEU ALA ALA GLN LEU GLN PHE ARG PRO ASP MET ASP VAL SEQRES 3 A 313 LYS THR VAL ARG GLU GLN PHE GLU LYS SER SER LEU ILE SEQRES 4 A 313 LEU VAL LYS MET ALA ASN GLU PRO ILE HIS ARG VAL GLU SEQRES 5 A 313 ASP ILE THR ILE PRO GLY ARG GLY GLY PRO ILE ARG ALA SEQRES 6 A 313 ARG VAL TYR ARG PRO ARG ASP GLY GLU ARG LEU PRO ALA SEQRES 7 A 313 VAL VAL TYR TYR HIS GLY GLY GLY PHE VAL LEU GLY SER SEQRES 8 A 313 VAL GLU THR HIS ASP HIS VAL CYS ARG ARG LEU ALA ASN SEQRES 9 A 313 LEU SER GLY ALA VAL VAL VAL SER VAL ASP TYR ARG LEU SEQRES 10 A 313 ALA PRO GLU HIS LYS PHE PRO ALA ALA VAL GLU ASP ALA SEQRES 11 A 313 TYR ASP ALA ALA LYS TRP VAL ALA ASP ASN TYR ASP LYS SEQRES 12 A 313 LEU GLY VAL ASP ASN GLY LYS ILE ALA VAL ALA GLY ASP SEQRES 13 A 313 SER ALA GLY GLY ASN LEU ALA ALA VAL THR ALA ILE MET SEQRES 14 A 313 ALA ARG ASP ARG GLY GLU SER PHE VAL LYS TYR GLN VAL SEQRES 15 A 313 LEU ILE TYR PRO ALA VAL ASN LEU THR GLY SER PRO THR SEQRES 16 A 313 VAL SER ARG VAL GLU TYR SER GLY PRO GLU TYR VAL ILE SEQRES 17 A 313 LEU THR ALA ASP LEU MET ALA TRP PHE GLY ARG GLN TYR SEQRES 18 A 313 PHE SER LYS PRO GLN ASP ALA LEU SER PRO TYR ALA SER SEQRES 19 A 313 PRO ILE PHE ALA ASP LEU SER ASN LEU PRO PRO ALA LEU SEQRES 20 A 313 VAL ILE THR ALA GLU TYR ASP PRO LEU ARG ASP GLU GLY SEQRES 21 A 313 GLU LEU TYR ALA HIS LEU LEU LYS THR ARG GLY VAL ARG SEQRES 22 A 313 ALA VAL ALA VAL ARG TYR ASN GLY VAL ILE HIS GLY PHE SEQRES 23 A 313 VAL ASN PHE TYR PRO ILE LEU GLU GLU GLY ARG GLU ALA SEQRES 24 A 313 VAL SER GLN ILE ALA ALA SER ILE LYS SER MET ALA VAL SEQRES 25 A 313 ALA SEQRES 1 B 313 MET PRO LEU SER PRO ILE LEU ARG GLN ILE LEU GLN GLN SEQRES 2 B 313 LEU ALA ALA GLN LEU GLN PHE ARG PRO ASP MET ASP VAL SEQRES 3 B 313 LYS THR VAL ARG GLU GLN PHE GLU LYS SER SER LEU ILE SEQRES 4 B 313 LEU VAL LYS MET ALA ASN GLU PRO ILE HIS ARG VAL GLU SEQRES 5 B 313 ASP ILE THR ILE PRO GLY ARG GLY GLY PRO ILE ARG ALA SEQRES 6 B 313 ARG VAL TYR ARG PRO ARG ASP GLY GLU ARG LEU PRO ALA SEQRES 7 B 313 VAL VAL TYR TYR HIS GLY GLY GLY PHE VAL LEU GLY SER SEQRES 8 B 313 VAL GLU THR HIS ASP HIS VAL CYS ARG ARG LEU ALA ASN SEQRES 9 B 313 LEU SER GLY ALA VAL VAL VAL SER VAL ASP TYR ARG LEU SEQRES 10 B 313 ALA PRO GLU HIS LYS PHE PRO ALA ALA VAL GLU ASP ALA SEQRES 11 B 313 TYR ASP ALA ALA LYS TRP VAL ALA ASP ASN TYR ASP LYS SEQRES 12 B 313 LEU GLY VAL ASP ASN GLY LYS ILE ALA VAL ALA GLY ASP SEQRES 13 B 313 SER ALA GLY GLY ASN LEU ALA ALA VAL THR ALA ILE MET SEQRES 14 B 313 ALA ARG ASP ARG GLY GLU SER PHE VAL LYS TYR GLN VAL SEQRES 15 B 313 LEU ILE TYR PRO ALA VAL ASN LEU THR GLY SER PRO THR SEQRES 16 B 313 VAL SER ARG VAL GLU TYR SER GLY PRO GLU TYR VAL ILE SEQRES 17 B 313 LEU THR ALA ASP LEU MET ALA TRP PHE GLY ARG GLN TYR SEQRES 18 B 313 PHE SER LYS PRO GLN ASP ALA LEU SER PRO TYR ALA SER SEQRES 19 B 313 PRO ILE PHE ALA ASP LEU SER ASN LEU PRO PRO ALA LEU SEQRES 20 B 313 VAL ILE THR ALA GLU TYR ASP PRO LEU ARG ASP GLU GLY SEQRES 21 B 313 GLU LEU TYR ALA HIS LEU LEU LYS THR ARG GLY VAL ARG SEQRES 22 B 313 ALA VAL ALA VAL ARG TYR ASN GLY VAL ILE HIS GLY PHE SEQRES 23 B 313 VAL ASN PHE TYR PRO ILE LEU GLU GLU GLY ARG GLU ALA SEQRES 24 B 313 VAL SER GLN ILE ALA ALA SER ILE LYS SER MET ALA VAL SEQRES 25 B 313 ALA FORMUL 3 HOH *246(H2 O) HELIX 1 1 SER A 4 LEU A 14 1 11 HELIX 2 2 ASP A 25 ASN A 45 1 21 HELIX 3 3 VAL A 92 THR A 94 5 3 HELIX 4 4 HIS A 95 GLY A 107 1 13 HELIX 5 5 PRO A 124 ASN A 140 1 17 HELIX 6 6 ASN A 140 GLY A 145 1 6 HELIX 7 7 SER A 157 ARG A 173 1 17 HELIX 8 8 THR A 195 TYR A 201 1 7 HELIX 9 9 GLY A 203 VAL A 207 5 5 HELIX 10 10 THR A 210 PHE A 222 1 13 HELIX 11 11 LYS A 224 SER A 230 5 7 HELIX 12 12 SER A 234 ALA A 238 5 5 HELIX 13 13 LEU A 256 ARG A 270 1 15 HELIX 14 14 GLY A 285 TYR A 290 5 6 HELIX 15 15 LEU A 293 MET A 310 1 18 HELIX 16 16 SER B 4 LEU B 14 1 11 HELIX 17 17 ASP B 25 ASN B 45 1 21 HELIX 18 18 HIS B 95 GLY B 107 1 13 HELIX 19 19 PRO B 124 ASN B 140 1 17 HELIX 20 20 ASN B 140 GLY B 145 1 6 HELIX 21 21 SER B 157 ARG B 173 1 17 HELIX 22 22 THR B 195 TYR B 201 1 7 HELIX 23 23 GLY B 203 VAL B 207 5 5 HELIX 24 24 THR B 210 PHE B 222 1 13 HELIX 25 25 LYS B 224 SER B 230 5 7 HELIX 26 26 SER B 234 ALA B 238 5 5 HELIX 27 27 LEU B 256 ARG B 270 1 15 HELIX 28 28 GLY B 285 TYR B 290 5 6 HELIX 29 29 LEU B 293 SER B 309 1 17 SHEET 1 AA16 ARG A 50 GLY A 58 0 SHEET 2 AA16 GLY A 61 ARG A 69 -1 O GLY A 61 N GLY A 58 SHEET 3 AA16 VAL A 109 ASP A 114 -1 O VAL A 110 N TYR A 68 SHEET 4 AA16 LEU A 76 TYR A 82 1 O PRO A 77 N VAL A 109 SHEET 5 AA16 VAL A 146 ASP A 156 1 N ASP A 147 O LEU A 76 SHEET 6 AA16 VAL A 178 ILE A 184 1 N LYS A 179 O ILE A 151 SHEET 7 AA16 ALA A 246 TYR A 253 1 O LEU A 247 N LEU A 183 SHEET 8 AA16 ALA A 274 ILE A 283 1 O VAL A 275 N VAL A 248 SHEET 9 AA16 ALA B 274 ILE B 283 -1 O ALA B 276 N ASN A 280 SHEET 10 AA16 ALA B 246 TYR B 253 1 O ALA B 246 N VAL B 275 SHEET 11 AA16 TYR B 180 ILE B 184 1 O GLN B 181 N LEU B 247 SHEET 12 AA16 VAL B 146 ASP B 156 1 O VAL B 153 N VAL B 182 SHEET 13 AA16 LEU B 76 TYR B 82 1 O LEU B 76 N ASP B 147 SHEET 14 AA16 VAL B 109 ASP B 114 1 O VAL B 109 N VAL B 79 SHEET 15 AA16 GLY B 61 ARG B 69 -1 O ARG B 64 N ASP B 114 SHEET 16 AA16 ARG B 50 GLY B 58 -1 O ARG B 50 N ARG B 69 CISPEP 1 ALA A 118 PRO A 119 0 0.60 CISPEP 2 PHE A 123 PRO A 124 0 6.73 CISPEP 3 ALA B 118 PRO B 119 0 7.73 CISPEP 4 PHE B 123 PRO B 124 0 7.03 SITE 1 ASA 6 SER A 157 HIS A 284 ASP A 254 ALA A 158 SITE 2 ASA 6 GLY A 85 GLY A 86 CRYST1 61.919 127.271 93.727 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016150 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007857 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010669 0.00000 MTRIX1 1 -0.950000 -0.311000 -0.015000 -60.20645 1 MTRIX2 1 -0.311000 0.950000 0.013000 -9.90338 1 MTRIX3 1 0.010000 0.017000 -1.000000 38.88976 1