data_437D
# 
_entry.id   437D 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.387 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   437D         pdb_0000437d 10.2210/pdb437d/pdb 
RCSB  UR0004       ?            ?                   
WWPDB D_1000179231 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 1998-12-03 
2 'Structure model' 1 1 2008-05-22 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2011-11-16 
5 'Structure model' 1 4 2024-02-28 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Atomic model'              
4 5 'Structure model' 'Data collection'           
5 5 'Structure model' 'Database references'       
6 5 'Structure model' 'Derived calculations'      
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 5 'Structure model' chem_comp_atom         
2 5 'Structure model' chem_comp_bond         
3 5 'Structure model' database_2             
4 5 'Structure model' pdbx_struct_conn_angle 
5 5 'Structure model' struct_conn            
6 5 'Structure model' struct_conn_type       
7 5 'Structure model' struct_site            
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  5 'Structure model' '_database_2.pdbx_DOI'                        
2  5 'Structure model' '_database_2.pdbx_database_accession'         
3  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'  
4  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'   
5  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 
6  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 
7  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 
8  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'  
9  5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id'  
10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'   
11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 
12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 
13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 
14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'  
15 5 'Structure model' '_pdbx_struct_conn_angle.value'               
16 5 'Structure model' '_struct_conn.conn_type_id'                   
17 5 'Structure model' '_struct_conn.id'                             
18 5 'Structure model' '_struct_conn.pdbx_dist_value'                
19 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'         
20 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id'             
21 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id'              
22 5 'Structure model' '_struct_conn.ptnr1_label_asym_id'            
23 5 'Structure model' '_struct_conn.ptnr1_label_atom_id'            
24 5 'Structure model' '_struct_conn.ptnr1_label_comp_id'            
25 5 'Structure model' '_struct_conn.ptnr1_label_seq_id'             
26 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id'             
27 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id'              
28 5 'Structure model' '_struct_conn.ptnr2_label_asym_id'            
29 5 'Structure model' '_struct_conn.ptnr2_label_atom_id'            
30 5 'Structure model' '_struct_conn.ptnr2_label_comp_id'            
31 5 'Structure model' '_struct_conn.ptnr2_label_seq_id'             
32 5 'Structure model' '_struct_conn_type.id'                        
33 5 'Structure model' '_struct_site.pdbx_auth_asym_id'              
34 5 'Structure model' '_struct_site.pdbx_auth_comp_id'              
35 5 'Structure model' '_struct_site.pdbx_auth_seq_id'               
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        437D 
_pdbx_database_status.recvd_initial_deposition_date   1998-11-24 
_pdbx_database_status.deposit_site                    NDB 
_pdbx_database_status.process_site                    NDB 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.SG_entry                        ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Su, L.'       1 
'Chen, L.'     2 
'Egli, M.'     3 
'Berger, J.M.' 4 
'Rich, A.'     5 
# 
_citation.id                        primary 
_citation.title                     
'Minor groove RNA triplex in the crystal structure of a ribosomal frameshifting viral pseudoknot.' 
_citation.journal_abbrev            Nat.Struct.Biol. 
_citation.journal_volume            6 
_citation.page_first                285 
_citation.page_last                 292 
_citation.year                      1999 
_citation.journal_id_ASTM           NSBIEW 
_citation.country                   US 
_citation.journal_id_ISSN           1072-8368 
_citation.journal_id_CSD            2024 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   10074948 
_citation.pdbx_database_id_DOI      10.1038/6722 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Su, L.'       1 ? 
primary 'Chen, L.'     2 ? 
primary 'Egli, M.'     3 ? 
primary 'Berger, J.M.' 4 ? 
primary 'Rich, A.'     5 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn 'RNA PSEUDOKNOT' 9245.484 1   ? ? ? ? 
2 non-polymer syn 'MAGNESIUM ION'  24.305   1   ? ? ? ? 
3 non-polymer syn 'SODIUM ION'     22.990   1   ? ? ? ? 
4 water       nat water            18.015   124 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   yes 
_entity_poly.pdbx_seq_one_letter_code       '(GTP)GCGCGGCACCGUCCGCGGAACAAACGG' 
_entity_poly.pdbx_seq_one_letter_code_can   GGCGCGGCACCGUCCGCGGAACAAACGG 
_entity_poly.pdbx_strand_id                 A 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
2 'MAGNESIUM ION' MG  
3 'SODIUM ION'    NA  
4 water           HOH 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  GTP n 
1 2  G   n 
1 3  C   n 
1 4  G   n 
1 5  C   n 
1 6  G   n 
1 7  G   n 
1 8  C   n 
1 9  A   n 
1 10 C   n 
1 11 C   n 
1 12 G   n 
1 13 U   n 
1 14 C   n 
1 15 C   n 
1 16 G   n 
1 17 C   n 
1 18 G   n 
1 19 G   n 
1 20 A   n 
1 21 A   n 
1 22 C   n 
1 23 A   n 
1 24 A   n 
1 25 A   n 
1 26 C   n 
1 27 G   n 
1 28 G   n 
# 
_pdbx_entity_src_syn.entity_id              1 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       ? 
_pdbx_entity_src_syn.pdbx_end_seq_num       ? 
_pdbx_entity_src_syn.organism_scientific    ? 
_pdbx_entity_src_syn.organism_common_name   ? 
_pdbx_entity_src_syn.ncbi_taxonomy_id       ? 
_pdbx_entity_src_syn.details                'RNA SEQUENCE TAKEN FROM BEET WESTERN YELLOW VIRUS' 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
A   'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P'   347.221 
C   'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE"  ? 'C9 H14 N3 O8 P'    323.197 
G   'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P'   363.221 
GTP non-polymer   n "GUANOSINE-5'-TRIPHOSPHATE"  ? 'C10 H16 N5 O14 P3' 523.180 
HOH non-polymer   . WATER                        ? 'H2 O'              18.015  
MG  non-polymer   . 'MAGNESIUM ION'              ? 'Mg 2'              24.305  
NA  non-polymer   . 'SODIUM ION'                 ? 'Na 1'              22.990  
U   'RNA linking' y "URIDINE-5'-MONOPHOSPHATE"   ? 'C9 H13 N2 O9 P'    324.181 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  GTP 1  1  1  GTP GTP A . n 
A 1 2  G   2  2  2  G   G   A . n 
A 1 3  C   3  3  3  C   C   A . n 
A 1 4  G   4  4  4  G   G   A . n 
A 1 5  C   5  5  5  C   C   A . n 
A 1 6  G   6  6  6  G   G   A . n 
A 1 7  G   7  7  7  G   G   A . n 
A 1 8  C   8  8  8  C   C   A . n 
A 1 9  A   9  9  9  A   A   A . n 
A 1 10 C   10 10 10 C   C   A . n 
A 1 11 C   11 11 11 C   C   A . n 
A 1 12 G   12 12 12 G   G   A . n 
A 1 13 U   13 13 13 U   U   A . n 
A 1 14 C   14 14 14 C   C   A . n 
A 1 15 C   15 15 15 C   C   A . n 
A 1 16 G   16 16 16 G   G   A . n 
A 1 17 C   17 17 17 C   C   A . n 
A 1 18 G   18 18 18 G   G   A . n 
A 1 19 G   19 19 19 G   G   A . n 
A 1 20 A   20 20 20 A   A   A . n 
A 1 21 A   21 21 21 A   A   A . n 
A 1 22 C   22 22 22 C   C   A . n 
A 1 23 A   23 23 23 A   A   A . n 
A 1 24 A   24 24 24 A   A   A . n 
A 1 25 A   25 25 25 A   A   A . n 
A 1 26 C   26 26 26 C   C   A . n 
A 1 27 G   27 27 27 G   G   A . n 
A 1 28 G   28 28 28 G   G   A . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
B 2 MG  1   100 100 MG  MG  A . 
C 3 NA  1   101 101 NA  NA  A . 
D 4 HOH 1   102 102 HOH HOH A . 
D 4 HOH 2   103 103 HOH HOH A . 
D 4 HOH 3   104 104 HOH HOH A . 
D 4 HOH 4   105 105 HOH HOH A . 
D 4 HOH 5   106 106 HOH HOH A . 
D 4 HOH 6   107 107 HOH HOH A . 
D 4 HOH 7   108 108 HOH HOH A . 
D 4 HOH 8   109 109 HOH HOH A . 
D 4 HOH 9   110 110 HOH HOH A . 
D 4 HOH 10  111 111 HOH HOH A . 
D 4 HOH 11  112 112 HOH HOH A . 
D 4 HOH 12  113 113 HOH HOH A . 
D 4 HOH 13  114 114 HOH HOH A . 
D 4 HOH 14  115 115 HOH HOH A . 
D 4 HOH 15  116 116 HOH HOH A . 
D 4 HOH 16  117 117 HOH HOH A . 
D 4 HOH 17  118 118 HOH HOH A . 
D 4 HOH 18  119 119 HOH HOH A . 
D 4 HOH 19  120 120 HOH HOH A . 
D 4 HOH 20  121 121 HOH HOH A . 
D 4 HOH 21  122 122 HOH HOH A . 
D 4 HOH 22  123 123 HOH HOH A . 
D 4 HOH 23  124 124 HOH HOH A . 
D 4 HOH 24  125 125 HOH HOH A . 
D 4 HOH 25  126 126 HOH HOH A . 
D 4 HOH 26  127 127 HOH HOH A . 
D 4 HOH 27  128 128 HOH HOH A . 
D 4 HOH 28  129 129 HOH HOH A . 
D 4 HOH 29  130 130 HOH HOH A . 
D 4 HOH 30  131 131 HOH HOH A . 
D 4 HOH 31  132 132 HOH HOH A . 
D 4 HOH 32  134 134 HOH HOH A . 
D 4 HOH 33  135 135 HOH HOH A . 
D 4 HOH 34  136 136 HOH HOH A . 
D 4 HOH 35  137 137 HOH HOH A . 
D 4 HOH 36  138 138 HOH HOH A . 
D 4 HOH 37  139 139 HOH HOH A . 
D 4 HOH 38  140 140 HOH HOH A . 
D 4 HOH 39  141 141 HOH HOH A . 
D 4 HOH 40  142 142 HOH HOH A . 
D 4 HOH 41  143 143 HOH HOH A . 
D 4 HOH 42  144 144 HOH HOH A . 
D 4 HOH 43  145 145 HOH HOH A . 
D 4 HOH 44  146 146 HOH HOH A . 
D 4 HOH 45  147 147 HOH HOH A . 
D 4 HOH 46  148 148 HOH HOH A . 
D 4 HOH 47  149 149 HOH HOH A . 
D 4 HOH 48  150 150 HOH HOH A . 
D 4 HOH 49  151 151 HOH HOH A . 
D 4 HOH 50  152 152 HOH HOH A . 
D 4 HOH 51  154 154 HOH HOH A . 
D 4 HOH 52  155 155 HOH HOH A . 
D 4 HOH 53  156 156 HOH HOH A . 
D 4 HOH 54  157 157 HOH HOH A . 
D 4 HOH 55  158 158 HOH HOH A . 
D 4 HOH 56  159 159 HOH HOH A . 
D 4 HOH 57  160 160 HOH HOH A . 
D 4 HOH 58  161 161 HOH HOH A . 
D 4 HOH 59  162 162 HOH HOH A . 
D 4 HOH 60  163 163 HOH HOH A . 
D 4 HOH 61  164 164 HOH HOH A . 
D 4 HOH 62  165 165 HOH HOH A . 
D 4 HOH 63  167 167 HOH HOH A . 
D 4 HOH 64  168 168 HOH HOH A . 
D 4 HOH 65  169 169 HOH HOH A . 
D 4 HOH 66  170 170 HOH HOH A . 
D 4 HOH 67  171 171 HOH HOH A . 
D 4 HOH 68  172 172 HOH HOH A . 
D 4 HOH 69  173 173 HOH HOH A . 
D 4 HOH 70  174 174 HOH HOH A . 
D 4 HOH 71  175 175 HOH HOH A . 
D 4 HOH 72  177 177 HOH HOH A . 
D 4 HOH 73  178 178 HOH HOH A . 
D 4 HOH 74  179 179 HOH HOH A . 
D 4 HOH 75  180 180 HOH HOH A . 
D 4 HOH 76  181 181 HOH HOH A . 
D 4 HOH 77  182 182 HOH HOH A . 
D 4 HOH 78  183 183 HOH HOH A . 
D 4 HOH 79  185 185 HOH HOH A . 
D 4 HOH 80  186 186 HOH HOH A . 
D 4 HOH 81  187 187 HOH HOH A . 
D 4 HOH 82  188 188 HOH HOH A . 
D 4 HOH 83  190 190 HOH HOH A . 
D 4 HOH 84  191 191 HOH HOH A . 
D 4 HOH 85  192 192 HOH HOH A . 
D 4 HOH 86  193 193 HOH HOH A . 
D 4 HOH 87  194 194 HOH HOH A . 
D 4 HOH 88  195 195 HOH HOH A . 
D 4 HOH 89  196 196 HOH HOH A . 
D 4 HOH 90  197 197 HOH HOH A . 
D 4 HOH 91  198 198 HOH HOH A . 
D 4 HOH 92  199 199 HOH HOH A . 
D 4 HOH 93  200 200 HOH HOH A . 
D 4 HOH 94  202 202 HOH HOH A . 
D 4 HOH 95  203 203 HOH HOH A . 
D 4 HOH 96  205 205 HOH HOH A . 
D 4 HOH 97  206 206 HOH HOH A . 
D 4 HOH 98  209 209 HOH HOH A . 
D 4 HOH 99  210 210 HOH HOH A . 
D 4 HOH 100 212 212 HOH HOH A . 
D 4 HOH 101 214 214 HOH HOH A . 
D 4 HOH 102 216 216 HOH HOH A . 
D 4 HOH 103 217 217 HOH HOH A . 
D 4 HOH 104 218 218 HOH HOH A . 
D 4 HOH 105 219 219 HOH HOH A . 
D 4 HOH 106 220 220 HOH HOH A . 
D 4 HOH 107 221 221 HOH HOH A . 
D 4 HOH 108 222 222 HOH HOH A . 
D 4 HOH 109 223 223 HOH HOH A . 
D 4 HOH 110 224 224 HOH HOH A . 
D 4 HOH 111 225 225 HOH HOH A . 
D 4 HOH 112 226 226 HOH HOH A . 
D 4 HOH 113 228 228 HOH HOH A . 
D 4 HOH 114 229 229 HOH HOH A . 
D 4 HOH 115 230 230 HOH HOH A . 
D 4 HOH 116 232 232 HOH HOH A . 
D 4 HOH 117 233 233 HOH HOH A . 
D 4 HOH 118 234 234 HOH HOH A . 
D 4 HOH 119 235 235 HOH HOH A . 
D 4 HOH 120 236 236 HOH HOH A . 
D 4 HOH 121 237 237 HOH HOH A . 
D 4 HOH 122 238 238 HOH HOH A . 
D 4 HOH 123 239 239 HOH HOH A . 
D 4 HOH 124 240 240 HOH HOH A . 
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
MIRAS     'model building' . ? 1 
CNS       refinement       . ? 2 
DENZO     'data reduction' . ? 3 
SCALEPACK 'data scaling'   . ? 4 
# 
_cell.entry_id           437D 
_cell.length_a           30.080 
_cell.length_b           30.080 
_cell.length_c           140.080 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        120.00 
_cell.Z_PDB              6 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         437D 
_symmetry.space_group_name_H-M             'P 32 2 1' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     trigonal 
_symmetry.Int_Tables_number                154 
# 
_exptl.entry_id          437D 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      1.98 
_exptl_crystal.density_percent_sol   43 
_exptl_crystal.description           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, SITTING DROP' 
_exptl_crystal_grow.temp            298 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              7.0 
_exptl_crystal_grow.pdbx_details    'pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K' 
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.details 
1 1 1 MGCL2            ? ? ? 
1 2 1 2-BUTANOL        ? ? ? 
1 3 1 'POTASSIUM MOPS' ? ? ? 
1 4 1 SPERMIDINE       ? ? ? 
1 5 2 2-BUTANOL        ? ? ? 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           100 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               'IMAGE PLATE' 
_diffrn_detector.type                   FUJI 
_diffrn_detector.pdbx_collection_date   1997-06-14 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   1.1406 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.type                        'NSLS BEAMLINE X4A' 
_diffrn_source.pdbx_synchrotron_site       NSLS 
_diffrn_source.pdbx_synchrotron_beamline   X4A 
_diffrn_source.pdbx_wavelength             1.1406 
_diffrn_source.pdbx_wavelength_list        ? 
# 
_reflns.entry_id                     437D 
_reflns.observed_criterion_sigma_I   ? 
_reflns.observed_criterion_sigma_F   2 
_reflns.d_resolution_low             30.0 
_reflns.d_resolution_high            1.6 
_reflns.number_obs                   8793 
_reflns.number_all                   9806 
_reflns.percent_possible_obs         93 
_reflns.pdbx_Rmerge_I_obs            0.0700000 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        ? 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              7.1 
_reflns.R_free_details               ? 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
# 
_reflns_shell.d_res_high             1.60 
_reflns_shell.d_res_low              1.66 
_reflns_shell.percent_possible_all   70 
_reflns_shell.Rmerge_I_obs           0.1650000 
_reflns_shell.pdbx_Rsym_value        ? 
_reflns_shell.meanI_over_sigI_obs    ? 
_reflns_shell.pdbx_redundancy        ? 
_reflns_shell.percent_possible_obs   ? 
_reflns_shell.number_unique_all      ? 
_reflns_shell.pdbx_diffrn_id         ? 
_reflns_shell.pdbx_ordinal           1 
# 
_refine.entry_id                                 437D 
_refine.ls_number_reflns_obs                     7877 
_refine.ls_number_reflns_all                     9806 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          2 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             8.0 
_refine.ls_d_res_high                            1.6 
_refine.ls_percent_reflns_obs                    85 
_refine.ls_R_factor_obs                          0.2070000 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       0.2070000 
_refine.ls_R_factor_R_free                       0.2540000 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 9 
_refine.ls_number_reflns_R_free                  916 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            -2.456 
_refine.aniso_B[2][2]                            -2.456 
_refine.aniso_B[3][3]                            4.911 
_refine.aniso_B[1][2]                            -0.282 
_refine.aniso_B[1][3]                            0.000 
_refine.aniso_B[2][3]                            0.000 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_ls_cross_valid_method               ? 
_refine.details                                  ? 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       ? 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.overall_SU_B                             ? 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.overall_SU_R_free                        ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   640 
_refine_hist.pdbx_number_atoms_ligand         2 
_refine_hist.number_atoms_solvent             124 
_refine_hist.number_atoms_total               766 
_refine_hist.d_res_high                       1.6 
_refine_hist.d_res_low                        8.0 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
c_bond_d                0.017 ? ? ? 'X-RAY DIFFRACTION' ? 
c_bond_d_na             ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_bond_d_prot           ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_angle_d               ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_angle_d_na            ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_angle_d_prot          ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_angle_deg             1.87  ? ? ? 'X-RAY DIFFRACTION' ? 
c_angle_deg_na          ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_angle_deg_prot        ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_dihedral_angle_d      ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_dihedral_angle_d_na   ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_dihedral_angle_d_prot ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_improper_angle_d      ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_improper_angle_d_na   ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_improper_angle_d_prot ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_mcbond_it             ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_mcangle_it            ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_scbond_it             ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_scangle_it            ?     ? ? ? 'X-RAY DIFFRACTION' ? 
# 
_database_PDB_matrix.entry_id          437D 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  437D 
_struct.title                     
'CRYSTAL STRUCTURE OF AN RNA PSEUDOKNOT FROM BEET WESTERN YELLOW VIRUS INVOLVED IN RIBOSOMAL FRAMESHIFTING' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        437D 
_struct_keywords.pdbx_keywords   RNA 
_struct_keywords.text            'PSEUDOKNOT, RNA, TRIPLEX, VIRAL FRAMESHIFTING' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
C N N 3 ? 
D N N 4 ? 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    437D 
_struct_ref.pdbx_db_accession          437D 
_struct_ref.pdbx_db_isoform            ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_align_begin           ? 
# 
_struct_ref_seq.align_id                      1 
_struct_ref_seq.ref_id                        1 
_struct_ref_seq.pdbx_PDB_id_code              437D 
_struct_ref_seq.pdbx_strand_id                A 
_struct_ref_seq.seq_align_beg                 1 
_struct_ref_seq.pdbx_seq_align_beg_ins_code   ? 
_struct_ref_seq.seq_align_end                 28 
_struct_ref_seq.pdbx_seq_align_end_ins_code   ? 
_struct_ref_seq.pdbx_db_accession             437D 
_struct_ref_seq.db_align_beg                  1 
_struct_ref_seq.pdbx_db_align_beg_ins_code    ? 
_struct_ref_seq.db_align_end                  28 
_struct_ref_seq.pdbx_db_align_end_ins_code    ? 
_struct_ref_seq.pdbx_auth_seq_align_beg       1 
_struct_ref_seq.pdbx_auth_seq_align_end       28 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   monomeric 
_pdbx_struct_assembly.oligomeric_count     1 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
_struct_biol.id                    1 
_struct_biol.pdbx_parent_biol_id   ? 
_struct_biol.details               ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
covale1  covale both ? A GTP 1  "O3'" ? ? ? 1_555 A G   2  P  ? ? A GTP 1   A G   2   1_555 ? ? ? ? ? ? ?             1.570 ? ? 
metalc1  metalc ?    ? A GTP 1  O2B   ? ? ? 1_555 B MG  .  MG ? ? A GTP 1   A MG  100 1_555 ? ? ? ? ? ? ?             2.024 ? ? 
metalc2  metalc ?    ? A GTP 1  O3G   ? ? ? 1_555 B MG  .  MG ? ? A GTP 1   A MG  100 1_555 ? ? ? ? ? ? ?             2.066 ? ? 
metalc3  metalc ?    ? A G   2  OP1   ? ? ? 1_555 B MG  .  MG ? ? A G   2   A MG  100 1_555 ? ? ? ? ? ? ?             2.071 ? ? 
metalc4  metalc ?    ? A G   16 "O2'" ? ? ? 1_555 C NA  .  NA ? ? A G   16  A NA  101 1_555 ? ? ? ? ? ? ?             2.806 ? ? 
metalc5  metalc ?    ? A G   16 N3    ? ? ? 1_555 C NA  .  NA ? ? A G   16  A NA  101 1_555 ? ? ? ? ? ? ?             2.773 ? ? 
metalc6  metalc ?    ? A A   21 OP2   ? ? ? 1_555 C NA  .  NA ? ? A A   21  A NA  101 1_555 ? ? ? ? ? ? ?             2.599 ? ? 
metalc7  metalc ?    ? A A   21 N7    ? ? ? 1_555 C NA  .  NA ? ? A A   21  A NA  101 1_555 ? ? ? ? ? ? ?             2.909 ? ? 
metalc8  metalc ?    ? B MG  .  MG    ? ? ? 1_555 D HOH .  O  ? ? A MG  100 A HOH 170 1_555 ? ? ? ? ? ? ?             2.211 ? ? 
metalc9  metalc ?    ? B MG  .  MG    ? ? ? 1_555 D HOH .  O  ? ? A MG  100 A HOH 183 1_555 ? ? ? ? ? ? ?             2.246 ? ? 
metalc10 metalc ?    ? B MG  .  MG    ? ? ? 1_555 D HOH .  O  ? ? A MG  100 A HOH 232 1_555 ? ? ? ? ? ? ?             2.083 ? ? 
metalc11 metalc ?    ? C NA  .  NA    ? ? ? 1_555 D HOH .  O  ? ? A NA  101 A HOH 149 1_555 ? ? ? ? ? ? ?             2.768 ? ? 
hydrog1  hydrog ?    ? A C   3  N3    ? ? ? 1_555 A G   18 N1 ? ? A C   3   A G   18  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog2  hydrog ?    ? A C   3  N4    ? ? ? 1_555 A G   18 O6 ? ? A C   3   A G   18  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog3  hydrog ?    ? A C   3  O2    ? ? ? 1_555 A G   18 N2 ? ? A C   3   A G   18  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog4  hydrog ?    ? A G   4  N1    ? ? ? 1_555 A C   17 N3 ? ? A G   4   A C   17  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog5  hydrog ?    ? A G   4  N2    ? ? ? 1_555 A C   17 O2 ? ? A G   4   A C   17  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog6  hydrog ?    ? A G   4  O6    ? ? ? 1_555 A C   17 N4 ? ? A G   4   A C   17  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog7  hydrog ?    ? A G   4  N2    ? ? ? 1_555 A A   20 N3 ? ? A G   4   A A   20  1_555 ? ? ? ? ? ? 'G-A MISPAIR' ?     ? ? 
hydrog8  hydrog ?    ? A C   5  N3    ? ? ? 1_555 A G   16 N1 ? ? A C   5   A G   16  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog9  hydrog ?    ? A C   5  N4    ? ? ? 1_555 A G   16 O6 ? ? A C   5   A G   16  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog10 hydrog ?    ? A C   5  O2    ? ? ? 1_555 A G   16 N2 ? ? A C   5   A G   16  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog11 hydrog ?    ? A G   6  N1    ? ? ? 1_555 A C   15 N3 ? ? A G   6   A C   15  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog12 hydrog ?    ? A G   6  N2    ? ? ? 1_555 A C   15 O2 ? ? A G   6   A C   15  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog13 hydrog ?    ? A G   6  O6    ? ? ? 1_555 A C   15 N4 ? ? A G   6   A C   15  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog14 hydrog ?    ? A G   7  N1    ? ? ? 1_555 A C   14 N3 ? ? A G   7   A C   14  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog15 hydrog ?    ? A G   7  N2    ? ? ? 1_555 A C   14 O2 ? ? A G   7   A C   14  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog16 hydrog ?    ? A G   7  O6    ? ? ? 1_555 A C   14 N4 ? ? A G   7   A C   14  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog17 hydrog ?    ? A G   7  N2    ? ? ? 1_555 A A   24 N1 ? ? A G   7   A A   24  1_555 ? ? ? ? ? ? TYPE_10_PAIR  ?     ? ? 
hydrog18 hydrog ?    ? A G   7  N3    ? ? ? 1_555 A A   24 N6 ? ? A G   7   A A   24  1_555 ? ? ? ? ? ? TYPE_10_PAIR  ?     ? ? 
hydrog19 hydrog ?    ? A C   8  N4    ? ? ? 1_555 A G   12 N7 ? ? A C   8   A G   12  1_555 ? ? ? ? ? ? 'C-G PAIR'    ?     ? ? 
hydrog20 hydrog ?    ? A C   8  O2    ? ? ? 1_555 A C   26 N4 ? ? A C   8   A C   26  1_555 ? ? ? ? ? ? 'C-C MISPAIR' ?     ? ? 
hydrog21 hydrog ?    ? A C   10 N3    ? ? ? 1_555 A G   28 N1 ? ? A C   10  A G   28  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog22 hydrog ?    ? A C   10 N4    ? ? ? 1_555 A G   28 O6 ? ? A C   10  A G   28  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog23 hydrog ?    ? A C   10 O2    ? ? ? 1_555 A G   28 N2 ? ? A C   10  A G   28  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog24 hydrog ?    ? A C   11 N3    ? ? ? 1_555 A G   27 N1 ? ? A C   11  A G   27  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog25 hydrog ?    ? A C   11 N4    ? ? ? 1_555 A G   27 O6 ? ? A C   11  A G   27  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog26 hydrog ?    ? A C   11 O2    ? ? ? 1_555 A G   27 N2 ? ? A C   11  A G   27  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog27 hydrog ?    ? A G   12 N1    ? ? ? 1_555 A C   26 N3 ? ? A G   12  A C   26  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog28 hydrog ?    ? A G   12 N2    ? ? ? 1_555 A C   26 O2 ? ? A G   12  A C   26  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog29 hydrog ?    ? A G   12 O6    ? ? ? 1_555 A C   26 N4 ? ? A G   12  A C   26  1_555 ? ? ? ? ? ? WATSON-CRICK  ?     ? ? 
hydrog30 hydrog ?    ? A C   14 O2    ? ? ? 1_555 A A   25 N6 ? ? A C   14  A A   25  1_555 ? ? ? ? ? ? 'C-A MISPAIR' ?     ? ? 
hydrog31 hydrog ?    ? A C   15 O2    ? ? ? 1_555 A A   23 N6 ? ? A C   15  A A   23  1_555 ? ? ? ? ? ? 'C-A MISPAIR' ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
covale ? ? 
metalc ? ? 
hydrog ? ? 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1  O2B   ? A GTP 1  ? A GTP 1   ? 1_555 MG ? B MG . ? A MG 100 ? 1_555 O3G ? A GTP 1  ? A GTP 1   ? 1_555 96.0  ? 
2  O2B   ? A GTP 1  ? A GTP 1   ? 1_555 MG ? B MG . ? A MG 100 ? 1_555 OP1 ? A G   2  ? A G   2   ? 1_555 83.7  ? 
3  O3G   ? A GTP 1  ? A GTP 1   ? 1_555 MG ? B MG . ? A MG 100 ? 1_555 OP1 ? A G   2  ? A G   2   ? 1_555 176.3 ? 
4  O2B   ? A GTP 1  ? A GTP 1   ? 1_555 MG ? B MG . ? A MG 100 ? 1_555 O   ? D HOH .  ? A HOH 170 ? 1_555 111.2 ? 
5  O3G   ? A GTP 1  ? A GTP 1   ? 1_555 MG ? B MG . ? A MG 100 ? 1_555 O   ? D HOH .  ? A HOH 170 ? 1_555 88.8  ? 
6  OP1   ? A G   2  ? A G   2   ? 1_555 MG ? B MG . ? A MG 100 ? 1_555 O   ? D HOH .  ? A HOH 170 ? 1_555 94.8  ? 
7  O2B   ? A GTP 1  ? A GTP 1   ? 1_555 MG ? B MG . ? A MG 100 ? 1_555 O   ? D HOH .  ? A HOH 183 ? 1_555 81.4  ? 
8  O3G   ? A GTP 1  ? A GTP 1   ? 1_555 MG ? B MG . ? A MG 100 ? 1_555 O   ? D HOH .  ? A HOH 183 ? 1_555 88.8  ? 
9  OP1   ? A G   2  ? A G   2   ? 1_555 MG ? B MG . ? A MG 100 ? 1_555 O   ? D HOH .  ? A HOH 183 ? 1_555 87.5  ? 
10 O     ? D HOH .  ? A HOH 170 ? 1_555 MG ? B MG . ? A MG 100 ? 1_555 O   ? D HOH .  ? A HOH 183 ? 1_555 167.3 ? 
11 O2B   ? A GTP 1  ? A GTP 1   ? 1_555 MG ? B MG . ? A MG 100 ? 1_555 O   ? D HOH .  ? A HOH 232 ? 1_555 161.7 ? 
12 O3G   ? A GTP 1  ? A GTP 1   ? 1_555 MG ? B MG . ? A MG 100 ? 1_555 O   ? D HOH .  ? A HOH 232 ? 1_555 95.6  ? 
13 OP1   ? A G   2  ? A G   2   ? 1_555 MG ? B MG . ? A MG 100 ? 1_555 O   ? D HOH .  ? A HOH 232 ? 1_555 83.9  ? 
14 O     ? D HOH .  ? A HOH 170 ? 1_555 MG ? B MG . ? A MG 100 ? 1_555 O   ? D HOH .  ? A HOH 232 ? 1_555 83.1  ? 
15 O     ? D HOH .  ? A HOH 183 ? 1_555 MG ? B MG . ? A MG 100 ? 1_555 O   ? D HOH .  ? A HOH 232 ? 1_555 84.7  ? 
16 "O2'" ? A G   16 ? A G   16  ? 1_555 NA ? C NA . ? A NA 101 ? 1_555 N3  ? A G   16 ? A G   16  ? 1_555 94.2  ? 
17 "O2'" ? A G   16 ? A G   16  ? 1_555 NA ? C NA . ? A NA 101 ? 1_555 OP2 ? A A   21 ? A A   21  ? 1_555 171.6 ? 
18 N3    ? A G   16 ? A G   16  ? 1_555 NA ? C NA . ? A NA 101 ? 1_555 OP2 ? A A   21 ? A A   21  ? 1_555 92.7  ? 
19 "O2'" ? A G   16 ? A G   16  ? 1_555 NA ? C NA . ? A NA 101 ? 1_555 N7  ? A A   21 ? A A   21  ? 1_555 64.5  ? 
20 N3    ? A G   16 ? A G   16  ? 1_555 NA ? C NA . ? A NA 101 ? 1_555 N7  ? A A   21 ? A A   21  ? 1_555 152.1 ? 
21 OP2   ? A A   21 ? A A   21  ? 1_555 NA ? C NA . ? A NA 101 ? 1_555 N7  ? A A   21 ? A A   21  ? 1_555 107.4 ? 
22 "O2'" ? A G   16 ? A G   16  ? 1_555 NA ? C NA . ? A NA 101 ? 1_555 O   ? D HOH .  ? A HOH 149 ? 1_555 71.3  ? 
23 N3    ? A G   16 ? A G   16  ? 1_555 NA ? C NA . ? A NA 101 ? 1_555 O   ? D HOH .  ? A HOH 149 ? 1_555 99.4  ? 
24 OP2   ? A A   21 ? A A   21  ? 1_555 NA ? C NA . ? A NA 101 ? 1_555 O   ? D HOH .  ? A HOH 149 ? 1_555 112.2 ? 
25 N7    ? A A   21 ? A A   21  ? 1_555 NA ? C NA . ? A NA 101 ? 1_555 O   ? D HOH .  ? A HOH 149 ? 1_555 90.9  ? 
# 
loop_
_struct_site.id 
_struct_site.pdbx_evidence_code 
_struct_site.pdbx_auth_asym_id 
_struct_site.pdbx_auth_comp_id 
_struct_site.pdbx_auth_seq_id 
_struct_site.pdbx_auth_ins_code 
_struct_site.pdbx_num_residues 
_struct_site.details 
AC1 Software A MG 100 ? 5 'BINDING SITE FOR RESIDUE MG A 100' 
AC2 Software A NA 101 ? 4 'BINDING SITE FOR RESIDUE NA A 101' 
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1 AC1 5 GTP A 1  ? GTP A 1   . ? 1_555 ? 
2 AC1 5 G   A 2  ? G   A 2   . ? 1_555 ? 
3 AC1 5 HOH D .  ? HOH A 170 . ? 1_555 ? 
4 AC1 5 HOH D .  ? HOH A 183 . ? 1_555 ? 
5 AC1 5 HOH D .  ? HOH A 232 . ? 1_555 ? 
6 AC2 4 G   A 16 ? G   A 16  . ? 1_555 ? 
7 AC2 4 C   A 17 ? C   A 17  . ? 1_555 ? 
8 AC2 4 A   A 21 ? A   A 21  . ? 1_555 ? 
9 AC2 4 HOH D .  ? HOH A 149 . ? 1_555 ? 
# 
loop_
_pdbx_validate_planes.id 
_pdbx_validate_planes.PDB_model_num 
_pdbx_validate_planes.auth_comp_id 
_pdbx_validate_planes.auth_asym_id 
_pdbx_validate_planes.auth_seq_id 
_pdbx_validate_planes.PDB_ins_code 
_pdbx_validate_planes.label_alt_id 
_pdbx_validate_planes.rmsd 
_pdbx_validate_planes.type 
1 1 C A 14 ? A 0.077 'SIDE CHAIN' 
2 1 G A 27 ? ? 0.053 'SIDE CHAIN' 
# 
_pdbx_struct_mod_residue.id               1 
_pdbx_struct_mod_residue.label_asym_id    A 
_pdbx_struct_mod_residue.label_comp_id    GTP 
_pdbx_struct_mod_residue.label_seq_id     1 
_pdbx_struct_mod_residue.auth_asym_id     A 
_pdbx_struct_mod_residue.auth_comp_id     GTP 
_pdbx_struct_mod_residue.auth_seq_id      1 
_pdbx_struct_mod_residue.PDB_ins_code     ? 
_pdbx_struct_mod_residue.parent_comp_id   G 
_pdbx_struct_mod_residue.details          "GUANOSINE-5'-TRIPHOSPHATE" 
# 
loop_
_pdbx_struct_special_symmetry.id 
_pdbx_struct_special_symmetry.PDB_model_num 
_pdbx_struct_special_symmetry.auth_asym_id 
_pdbx_struct_special_symmetry.auth_comp_id 
_pdbx_struct_special_symmetry.auth_seq_id 
_pdbx_struct_special_symmetry.PDB_ins_code 
_pdbx_struct_special_symmetry.label_asym_id 
_pdbx_struct_special_symmetry.label_comp_id 
_pdbx_struct_special_symmetry.label_seq_id 
1 1 A HOH 118 ? D HOH . 
2 1 A HOH 122 ? D HOH . 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
A   OP3    O  N N 1   
A   P      P  N N 2   
A   OP1    O  N N 3   
A   OP2    O  N N 4   
A   "O5'"  O  N N 5   
A   "C5'"  C  N N 6   
A   "C4'"  C  N R 7   
A   "O4'"  O  N N 8   
A   "C3'"  C  N S 9   
A   "O3'"  O  N N 10  
A   "C2'"  C  N R 11  
A   "O2'"  O  N N 12  
A   "C1'"  C  N R 13  
A   N9     N  Y N 14  
A   C8     C  Y N 15  
A   N7     N  Y N 16  
A   C5     C  Y N 17  
A   C6     C  Y N 18  
A   N6     N  N N 19  
A   N1     N  Y N 20  
A   C2     C  Y N 21  
A   N3     N  Y N 22  
A   C4     C  Y N 23  
A   HOP3   H  N N 24  
A   HOP2   H  N N 25  
A   "H5'"  H  N N 26  
A   "H5''" H  N N 27  
A   "H4'"  H  N N 28  
A   "H3'"  H  N N 29  
A   "HO3'" H  N N 30  
A   "H2'"  H  N N 31  
A   "HO2'" H  N N 32  
A   "H1'"  H  N N 33  
A   H8     H  N N 34  
A   H61    H  N N 35  
A   H62    H  N N 36  
A   H2     H  N N 37  
C   OP3    O  N N 38  
C   P      P  N N 39  
C   OP1    O  N N 40  
C   OP2    O  N N 41  
C   "O5'"  O  N N 42  
C   "C5'"  C  N N 43  
C   "C4'"  C  N R 44  
C   "O4'"  O  N N 45  
C   "C3'"  C  N S 46  
C   "O3'"  O  N N 47  
C   "C2'"  C  N R 48  
C   "O2'"  O  N N 49  
C   "C1'"  C  N R 50  
C   N1     N  N N 51  
C   C2     C  N N 52  
C   O2     O  N N 53  
C   N3     N  N N 54  
C   C4     C  N N 55  
C   N4     N  N N 56  
C   C5     C  N N 57  
C   C6     C  N N 58  
C   HOP3   H  N N 59  
C   HOP2   H  N N 60  
C   "H5'"  H  N N 61  
C   "H5''" H  N N 62  
C   "H4'"  H  N N 63  
C   "H3'"  H  N N 64  
C   "HO3'" H  N N 65  
C   "H2'"  H  N N 66  
C   "HO2'" H  N N 67  
C   "H1'"  H  N N 68  
C   H41    H  N N 69  
C   H42    H  N N 70  
C   H5     H  N N 71  
C   H6     H  N N 72  
G   OP3    O  N N 73  
G   P      P  N N 74  
G   OP1    O  N N 75  
G   OP2    O  N N 76  
G   "O5'"  O  N N 77  
G   "C5'"  C  N N 78  
G   "C4'"  C  N R 79  
G   "O4'"  O  N N 80  
G   "C3'"  C  N S 81  
G   "O3'"  O  N N 82  
G   "C2'"  C  N R 83  
G   "O2'"  O  N N 84  
G   "C1'"  C  N R 85  
G   N9     N  Y N 86  
G   C8     C  Y N 87  
G   N7     N  Y N 88  
G   C5     C  Y N 89  
G   C6     C  N N 90  
G   O6     O  N N 91  
G   N1     N  N N 92  
G   C2     C  N N 93  
G   N2     N  N N 94  
G   N3     N  N N 95  
G   C4     C  Y N 96  
G   HOP3   H  N N 97  
G   HOP2   H  N N 98  
G   "H5'"  H  N N 99  
G   "H5''" H  N N 100 
G   "H4'"  H  N N 101 
G   "H3'"  H  N N 102 
G   "HO3'" H  N N 103 
G   "H2'"  H  N N 104 
G   "HO2'" H  N N 105 
G   "H1'"  H  N N 106 
G   H8     H  N N 107 
G   H1     H  N N 108 
G   H21    H  N N 109 
G   H22    H  N N 110 
GTP PG     P  N N 111 
GTP O1G    O  N N 112 
GTP O2G    O  N N 113 
GTP O3G    O  N N 114 
GTP O3B    O  N N 115 
GTP PB     P  N N 116 
GTP O1B    O  N N 117 
GTP O2B    O  N N 118 
GTP O3A    O  N N 119 
GTP PA     P  N N 120 
GTP O1A    O  N N 121 
GTP O2A    O  N N 122 
GTP "O5'"  O  N N 123 
GTP "C5'"  C  N N 124 
GTP "C4'"  C  N R 125 
GTP "O4'"  O  N N 126 
GTP "C3'"  C  N S 127 
GTP "O3'"  O  N N 128 
GTP "C2'"  C  N R 129 
GTP "O2'"  O  N N 130 
GTP "C1'"  C  N R 131 
GTP N9     N  Y N 132 
GTP C8     C  Y N 133 
GTP N7     N  Y N 134 
GTP C5     C  Y N 135 
GTP C6     C  N N 136 
GTP O6     O  N N 137 
GTP N1     N  N N 138 
GTP C2     C  N N 139 
GTP N2     N  N N 140 
GTP N3     N  N N 141 
GTP C4     C  Y N 142 
GTP HOG2   H  N N 143 
GTP HOG3   H  N N 144 
GTP HOB2   H  N N 145 
GTP HOA2   H  N N 146 
GTP "H5'"  H  N N 147 
GTP "H5''" H  N N 148 
GTP "H4'"  H  N N 149 
GTP "H3'"  H  N N 150 
GTP "HO3'" H  N N 151 
GTP "H2'"  H  N N 152 
GTP "HO2'" H  N N 153 
GTP "H1'"  H  N N 154 
GTP H8     H  N N 155 
GTP HN1    H  N N 156 
GTP HN21   H  N N 157 
GTP HN22   H  N N 158 
HOH O      O  N N 159 
HOH H1     H  N N 160 
HOH H2     H  N N 161 
MG  MG     MG N N 162 
NA  NA     NA N N 163 
U   OP3    O  N N 164 
U   P      P  N N 165 
U   OP1    O  N N 166 
U   OP2    O  N N 167 
U   "O5'"  O  N N 168 
U   "C5'"  C  N N 169 
U   "C4'"  C  N R 170 
U   "O4'"  O  N N 171 
U   "C3'"  C  N S 172 
U   "O3'"  O  N N 173 
U   "C2'"  C  N R 174 
U   "O2'"  O  N N 175 
U   "C1'"  C  N R 176 
U   N1     N  N N 177 
U   C2     C  N N 178 
U   O2     O  N N 179 
U   N3     N  N N 180 
U   C4     C  N N 181 
U   O4     O  N N 182 
U   C5     C  N N 183 
U   C6     C  N N 184 
U   HOP3   H  N N 185 
U   HOP2   H  N N 186 
U   "H5'"  H  N N 187 
U   "H5''" H  N N 188 
U   "H4'"  H  N N 189 
U   "H3'"  H  N N 190 
U   "HO3'" H  N N 191 
U   "H2'"  H  N N 192 
U   "HO2'" H  N N 193 
U   "H1'"  H  N N 194 
U   H3     H  N N 195 
U   H5     H  N N 196 
U   H6     H  N N 197 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A   OP3   P      sing N N 1   
A   OP3   HOP3   sing N N 2   
A   P     OP1    doub N N 3   
A   P     OP2    sing N N 4   
A   P     "O5'"  sing N N 5   
A   OP2   HOP2   sing N N 6   
A   "O5'" "C5'"  sing N N 7   
A   "C5'" "C4'"  sing N N 8   
A   "C5'" "H5'"  sing N N 9   
A   "C5'" "H5''" sing N N 10  
A   "C4'" "O4'"  sing N N 11  
A   "C4'" "C3'"  sing N N 12  
A   "C4'" "H4'"  sing N N 13  
A   "O4'" "C1'"  sing N N 14  
A   "C3'" "O3'"  sing N N 15  
A   "C3'" "C2'"  sing N N 16  
A   "C3'" "H3'"  sing N N 17  
A   "O3'" "HO3'" sing N N 18  
A   "C2'" "O2'"  sing N N 19  
A   "C2'" "C1'"  sing N N 20  
A   "C2'" "H2'"  sing N N 21  
A   "O2'" "HO2'" sing N N 22  
A   "C1'" N9     sing N N 23  
A   "C1'" "H1'"  sing N N 24  
A   N9    C8     sing Y N 25  
A   N9    C4     sing Y N 26  
A   C8    N7     doub Y N 27  
A   C8    H8     sing N N 28  
A   N7    C5     sing Y N 29  
A   C5    C6     sing Y N 30  
A   C5    C4     doub Y N 31  
A   C6    N6     sing N N 32  
A   C6    N1     doub Y N 33  
A   N6    H61    sing N N 34  
A   N6    H62    sing N N 35  
A   N1    C2     sing Y N 36  
A   C2    N3     doub Y N 37  
A   C2    H2     sing N N 38  
A   N3    C4     sing Y N 39  
C   OP3   P      sing N N 40  
C   OP3   HOP3   sing N N 41  
C   P     OP1    doub N N 42  
C   P     OP2    sing N N 43  
C   P     "O5'"  sing N N 44  
C   OP2   HOP2   sing N N 45  
C   "O5'" "C5'"  sing N N 46  
C   "C5'" "C4'"  sing N N 47  
C   "C5'" "H5'"  sing N N 48  
C   "C5'" "H5''" sing N N 49  
C   "C4'" "O4'"  sing N N 50  
C   "C4'" "C3'"  sing N N 51  
C   "C4'" "H4'"  sing N N 52  
C   "O4'" "C1'"  sing N N 53  
C   "C3'" "O3'"  sing N N 54  
C   "C3'" "C2'"  sing N N 55  
C   "C3'" "H3'"  sing N N 56  
C   "O3'" "HO3'" sing N N 57  
C   "C2'" "O2'"  sing N N 58  
C   "C2'" "C1'"  sing N N 59  
C   "C2'" "H2'"  sing N N 60  
C   "O2'" "HO2'" sing N N 61  
C   "C1'" N1     sing N N 62  
C   "C1'" "H1'"  sing N N 63  
C   N1    C2     sing N N 64  
C   N1    C6     sing N N 65  
C   C2    O2     doub N N 66  
C   C2    N3     sing N N 67  
C   N3    C4     doub N N 68  
C   C4    N4     sing N N 69  
C   C4    C5     sing N N 70  
C   N4    H41    sing N N 71  
C   N4    H42    sing N N 72  
C   C5    C6     doub N N 73  
C   C5    H5     sing N N 74  
C   C6    H6     sing N N 75  
G   OP3   P      sing N N 76  
G   OP3   HOP3   sing N N 77  
G   P     OP1    doub N N 78  
G   P     OP2    sing N N 79  
G   P     "O5'"  sing N N 80  
G   OP2   HOP2   sing N N 81  
G   "O5'" "C5'"  sing N N 82  
G   "C5'" "C4'"  sing N N 83  
G   "C5'" "H5'"  sing N N 84  
G   "C5'" "H5''" sing N N 85  
G   "C4'" "O4'"  sing N N 86  
G   "C4'" "C3'"  sing N N 87  
G   "C4'" "H4'"  sing N N 88  
G   "O4'" "C1'"  sing N N 89  
G   "C3'" "O3'"  sing N N 90  
G   "C3'" "C2'"  sing N N 91  
G   "C3'" "H3'"  sing N N 92  
G   "O3'" "HO3'" sing N N 93  
G   "C2'" "O2'"  sing N N 94  
G   "C2'" "C1'"  sing N N 95  
G   "C2'" "H2'"  sing N N 96  
G   "O2'" "HO2'" sing N N 97  
G   "C1'" N9     sing N N 98  
G   "C1'" "H1'"  sing N N 99  
G   N9    C8     sing Y N 100 
G   N9    C4     sing Y N 101 
G   C8    N7     doub Y N 102 
G   C8    H8     sing N N 103 
G   N7    C5     sing Y N 104 
G   C5    C6     sing N N 105 
G   C5    C4     doub Y N 106 
G   C6    O6     doub N N 107 
G   C6    N1     sing N N 108 
G   N1    C2     sing N N 109 
G   N1    H1     sing N N 110 
G   C2    N2     sing N N 111 
G   C2    N3     doub N N 112 
G   N2    H21    sing N N 113 
G   N2    H22    sing N N 114 
G   N3    C4     sing N N 115 
GTP PG    O1G    doub N N 116 
GTP PG    O2G    sing N N 117 
GTP PG    O3G    sing N N 118 
GTP PG    O3B    sing N N 119 
GTP O2G   HOG2   sing N N 120 
GTP O3G   HOG3   sing N N 121 
GTP O3B   PB     sing N N 122 
GTP PB    O1B    doub N N 123 
GTP PB    O2B    sing N N 124 
GTP PB    O3A    sing N N 125 
GTP O2B   HOB2   sing N N 126 
GTP O3A   PA     sing N N 127 
GTP PA    O1A    doub N N 128 
GTP PA    O2A    sing N N 129 
GTP PA    "O5'"  sing N N 130 
GTP O2A   HOA2   sing N N 131 
GTP "O5'" "C5'"  sing N N 132 
GTP "C5'" "C4'"  sing N N 133 
GTP "C5'" "H5'"  sing N N 134 
GTP "C5'" "H5''" sing N N 135 
GTP "C4'" "O4'"  sing N N 136 
GTP "C4'" "C3'"  sing N N 137 
GTP "C4'" "H4'"  sing N N 138 
GTP "O4'" "C1'"  sing N N 139 
GTP "C3'" "O3'"  sing N N 140 
GTP "C3'" "C2'"  sing N N 141 
GTP "C3'" "H3'"  sing N N 142 
GTP "O3'" "HO3'" sing N N 143 
GTP "C2'" "O2'"  sing N N 144 
GTP "C2'" "C1'"  sing N N 145 
GTP "C2'" "H2'"  sing N N 146 
GTP "O2'" "HO2'" sing N N 147 
GTP "C1'" N9     sing N N 148 
GTP "C1'" "H1'"  sing N N 149 
GTP N9    C8     sing Y N 150 
GTP N9    C4     sing Y N 151 
GTP C8    N7     doub Y N 152 
GTP C8    H8     sing N N 153 
GTP N7    C5     sing Y N 154 
GTP C5    C6     sing N N 155 
GTP C5    C4     doub Y N 156 
GTP C6    O6     doub N N 157 
GTP C6    N1     sing N N 158 
GTP N1    C2     sing N N 159 
GTP N1    HN1    sing N N 160 
GTP C2    N2     sing N N 161 
GTP C2    N3     doub N N 162 
GTP N2    HN21   sing N N 163 
GTP N2    HN22   sing N N 164 
GTP N3    C4     sing N N 165 
HOH O     H1     sing N N 166 
HOH O     H2     sing N N 167 
U   OP3   P      sing N N 168 
U   OP3   HOP3   sing N N 169 
U   P     OP1    doub N N 170 
U   P     OP2    sing N N 171 
U   P     "O5'"  sing N N 172 
U   OP2   HOP2   sing N N 173 
U   "O5'" "C5'"  sing N N 174 
U   "C5'" "C4'"  sing N N 175 
U   "C5'" "H5'"  sing N N 176 
U   "C5'" "H5''" sing N N 177 
U   "C4'" "O4'"  sing N N 178 
U   "C4'" "C3'"  sing N N 179 
U   "C4'" "H4'"  sing N N 180 
U   "O4'" "C1'"  sing N N 181 
U   "C3'" "O3'"  sing N N 182 
U   "C3'" "C2'"  sing N N 183 
U   "C3'" "H3'"  sing N N 184 
U   "O3'" "HO3'" sing N N 185 
U   "C2'" "O2'"  sing N N 186 
U   "C2'" "C1'"  sing N N 187 
U   "C2'" "H2'"  sing N N 188 
U   "O2'" "HO2'" sing N N 189 
U   "C1'" N1     sing N N 190 
U   "C1'" "H1'"  sing N N 191 
U   N1    C2     sing N N 192 
U   N1    C6     sing N N 193 
U   C2    O2     doub N N 194 
U   C2    N3     sing N N 195 
U   N3    C4     sing N N 196 
U   N3    H3     sing N N 197 
U   C4    O4     doub N N 198 
U   C4    C5     sing N N 199 
U   C5    C6     doub N N 200 
U   C5    H5     sing N N 201 
U   C6    H6     sing N N 202 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
437D 'double helix'        
437D 'a-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A C 3  1_555 A G 18 1_555 0.126  -0.037 -0.279 6.602   -3.154  -0.188 1 A_C3:G18_A  A 3  ? A 18 ? 19 1 
1 A G 4  1_555 A C 17 1_555 -0.261 -0.104 0.023  -3.707  -19.484 3.824  2 A_G4:C17_A  A 4  ? A 17 ? 19 1 
1 A C 5  1_555 A G 16 1_555 0.070  -0.119 -0.040 3.911   -15.797 2.366  3 A_C5:G16_A  A 5  ? A 16 ? 19 1 
1 A G 6  1_555 A C 15 1_555 -0.243 -0.090 0.066  -6.254  -14.356 -1.915 4 A_G6:C15_A  A 6  ? A 15 ? 19 1 
1 A G 7  1_555 A C 14 1_555 -0.180 -0.047 -0.062 -10.888 -11.767 1.660  5 A_G7:C14_A  A 7  ? A 14 ? 19 1 
1 A C 26 1_555 A G 12 1_555 0.451  -0.103 -0.067 9.858   -27.246 3.205  6 A_C26:G12_A A 26 ? A 12 ? 19 1 
1 A G 27 1_555 A C 11 1_555 -0.328 -0.203 0.344  6.446   -13.560 -1.054 7 A_G27:C11_A A 27 ? A 11 ? 19 1 
1 A G 28 1_555 A C 10 1_555 -0.295 -0.119 -0.422 -13.770 -20.560 -1.189 8 A_G28:C10_A A 28 ? A 10 ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A C 3  1_555 A G 18 1_555 A G 4  1_555 A C 17 1_555 0.815  -1.918 3.535 -1.587 8.879  31.860 -4.866 -1.699 2.869 15.783 2.820   
33.081 1 AA_C3G4:C17G18_AA   A 3  ? A 18 ? A 4  ? A 17 ? 
1 A G 4  1_555 A C 17 1_555 A C 5  1_555 A G 16 1_555 -1.013 -1.866 3.098 -1.988 0.780  29.371 -3.829 1.590  3.108 1.535  3.914   
29.447 2 AA_G4C5:G16C17_AA   A 4  ? A 17 ? A 5  ? A 16 ? 
1 A C 5  1_555 A G 16 1_555 A G 6  1_555 A C 15 1_555 -0.203 -1.648 3.440 -0.429 10.776 28.530 -5.212 0.305  2.658 20.944 0.834   
30.461 3 AA_C5G6:C15G16_AA   A 5  ? A 16 ? A 6  ? A 15 ? 
1 A G 6  1_555 A C 15 1_555 A G 7  1_555 A C 14 1_555 0.390  -1.552 3.365 3.247  5.235  36.634 -3.137 -0.178 3.143 8.257  -5.122  
37.130 4 AA_G6G7:C14C15_AA   A 6  ? A 15 ? A 7  ? A 14 ? 
1 A G 7  1_555 A C 14 1_555 A C 26 1_555 A G 12 1_555 -5.613 -0.332 3.628 14.233 -5.491 92.315 -0.125 4.128  2.952 -3.786 -9.814  
93.285 5 AA_G7C26:G12C14_AA  A 7  ? A 14 ? A 26 ? A 12 ? 
1 A C 26 1_555 A G 12 1_555 A G 27 1_555 A C 11 1_555 -0.439 -1.713 3.161 -5.449 14.114 31.220 -4.777 0.005  2.246 24.505 9.461   
34.610 6 AA_C26G27:C11G12_AA A 26 ? A 12 ? A 27 ? A 11 ? 
1 A G 27 1_555 A C 11 1_555 A G 28 1_555 A C 10 1_555 0.739  -1.977 3.883 6.401  6.836  29.134 -5.301 0.051  3.423 13.168 -12.329 
30.572 7 AA_G27G28:C10C11_AA A 27 ? A 11 ? A 28 ? A 10 ? 
# 
_atom_sites.entry_id                    437D 
_atom_sites.fract_transf_matrix[1][1]   0.033245 
_atom_sites.fract_transf_matrix[1][2]   0.019194 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.038388 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.007139 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C  
MG 
N  
NA 
O  
P  
# 
loop_