HEADER GENE REGULATION 27-JUN-26 43EA TITLE CRYSTAL STRUCTURE OF ASPERGILLUS FUMIGATUS HISTONE DEACETYLASE HOS3 IN TITLE 2 COMPLEX WITH T2383 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE DEACETYLASE HOSB; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS FUMIGATUS (STRAIN CBS 144.89 / FGSC SOURCE 3 A1163 / CEA10); SOURCE 4 ORGANISM_TAXID: 451804; SOURCE 5 STRAIN: CBS 144.89 / FGSC A1163 / CEA10; SOURCE 6 GENE: AFUB_098740; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: RIL; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28A-SMT KEYWDS STONE DEACETYLASE, FUNGAL HDAC, ZINC-DEPENDENT ENZYME, T2383, GENE KEYWDS 2 REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR H.W.YANG,T.LI,C.T.LIU,X.D.WANG,T.LI,N.YANG REVDAT 1 28-OCT-26 43EA 0 JRNL AUTH H.YANG,T.LI,C.LIU,X.WANG,T.LI,N.YANG JRNL TITL STRUCTURAL AND MECHANISTIC BASIS OF SELECTIVE INHIBITION OF JRNL TITL 2 THE FUNGAL-SPECIFIC HISTONE DEACETYLASE HOS3 FROM THE JRNL TITL 3 PATHOGENIC FUNGUS ASPERGILLUS FUMIGATUS. JRNL REF PROTEIN SCI. V. 35 70827 2026 JRNL REFN ESSN 1469-896X JRNL PMID 42876389 JRNL DOI 10.1002/PRO.70827 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 82.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 43866 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.540 REMARK 3 FREE R VALUE TEST SET COUNT : 1991 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 10.0000 - 4.7800 0.98 3140 146 0.1721 0.1886 REMARK 3 2 4.7800 - 3.7900 0.98 3023 145 0.1426 0.1899 REMARK 3 3 3.7900 - 3.3100 0.98 2977 142 0.1681 0.1941 REMARK 3 4 3.3100 - 3.0100 0.99 2976 143 0.1944 0.2545 REMARK 3 5 3.0100 - 2.7900 1.00 3016 144 0.2022 0.2559 REMARK 3 6 2.7900 - 2.6300 1.00 2985 142 0.1987 0.2396 REMARK 3 7 2.6300 - 2.5000 1.00 2977 141 0.2025 0.2646 REMARK 3 8 2.5000 - 2.3900 1.00 2997 143 0.2006 0.2511 REMARK 3 9 2.3900 - 2.3000 1.00 2996 142 0.2106 0.2904 REMARK 3 10 2.3000 - 2.2200 1.00 2960 141 0.2379 0.2760 REMARK 3 11 2.2200 - 2.1500 1.00 2975 142 0.2346 0.2668 REMARK 3 12 2.1500 - 2.0900 1.00 2958 140 0.2503 0.2964 REMARK 3 13 2.0900 - 2.0300 1.00 3002 143 0.2842 0.3220 REMARK 3 14 2.0300 - 1.9800 0.98 2893 137 0.3154 0.3383 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.263 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.324 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3906 REMARK 3 ANGLE : 0.965 5320 REMARK 3 CHIRALITY : 0.053 588 REMARK 3 PLANARITY : 0.006 686 REMARK 3 DIHEDRAL : 17.978 1352 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 43EA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 30-JUN-26. REMARK 100 THE DEPOSITION ID IS D_1300076193. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUN-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44076 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 82.750 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.03546 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.41500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.410 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) POLYACRYLIC ACID 5100, 100 REMARK 280 MM HEPES-NAOH PH 7.0, 20 MM MGCL2., VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.99000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.21500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 82.74500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 34.99000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.21500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 82.74500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.99000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 54.21500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 82.74500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 34.99000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 54.21500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 82.74500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 139.96000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 165.49000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 145 REMARK 465 PRO A 146 REMARK 465 GLN A 147 REMARK 465 GLU A 148 REMARK 465 GLN A 149 REMARK 465 ALA A 150 REMARK 465 ALA A 151 REMARK 465 GLN A 244 REMARK 465 ARG A 300 REMARK 465 SER A 301 REMARK 465 SER A 302 REMARK 465 GLY A 303 REMARK 465 LYS A 304 REMARK 465 ASP A 305 REMARK 465 GLY A 306 REMARK 465 ASP A 307 REMARK 465 SER A 308 REMARK 465 ALA A 309 REMARK 465 LYS A 310 REMARK 465 LYS A 311 REMARK 465 ALA A 312 REMARK 465 ASN A 607 REMARK 465 HIS A 608 REMARK 465 GLU A 609 REMARK 465 GLN A 610 REMARK 465 GLN A 611 REMARK 465 VAL A 612 REMARK 465 GLY A 613 REMARK 465 LEU A 614 REMARK 465 ALA A 615 REMARK 465 SER A 616 REMARK 465 GLU A 617 REMARK 465 MET A 618 REMARK 465 PHE A 619 REMARK 465 ASP A 620 REMARK 465 ARG A 621 REMARK 465 LEU A 622 REMARK 465 HIS A 623 REMARK 465 VAL A 624 REMARK 465 SER A 625 REMARK 465 ASP A 626 REMARK 465 SER A 627 REMARK 465 ASN A 628 REMARK 465 ALA A 629 REMARK 465 PRO A 630 REMARK 465 ALA A 631 REMARK 465 GLU A 632 REMARK 465 ALA A 633 REMARK 465 LEU A 634 REMARK 465 ARG A 635 REMARK 465 THR A 636 REMARK 465 PRO A 637 REMARK 465 SER A 638 REMARK 465 PRO A 664 REMARK 465 SER A 665 REMARK 465 THR A 666 REMARK 465 ALA A 667 REMARK 465 PRO A 668 REMARK 465 LYS A 669 REMARK 465 SER A 670 REMARK 465 LYS A 671 REMARK 465 SER A 672 REMARK 465 ALA A 673 REMARK 465 ARG A 674 REMARK 465 THR A 675 REMARK 465 TYR A 676 REMARK 465 PHE A 677 REMARK 465 ALA A 678 REMARK 465 PRO A 679 REMARK 465 THR A 680 REMARK 465 GLN A 681 REMARK 465 SER A 682 REMARK 465 PHE A 683 REMARK 465 ALA A 684 REMARK 465 ALA A 685 REMARK 465 LYS A 686 REMARK 465 VAL A 687 REMARK 465 VAL A 688 REMARK 465 ALA A 689 REMARK 465 ALA A 690 REMARK 465 PRO A 691 REMARK 465 ARG A 692 REMARK 465 ASP A 693 REMARK 465 ARG A 694 REMARK 465 LYS A 695 REMARK 465 SER A 696 REMARK 465 THR A 697 REMARK 465 GLY A 698 REMARK 465 SER A 699 REMARK 465 PRO A 700 REMARK 465 ALA A 701 REMARK 465 GLY A 702 REMARK 465 SER A 703 REMARK 465 ASP A 704 REMARK 465 VAL A 705 REMARK 465 VAL A 706 REMARK 465 PRO A 707 REMARK 465 LEU A 708 REMARK 465 PRO A 709 REMARK 465 GLU A 710 REMARK 465 VAL A 711 REMARK 465 ASN A 740 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 195 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 198 CG CD CE NZ REMARK 470 ARG A 233 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 239 CG CD OE1 OE2 REMARK 470 LEU A 291 CG CD1 CD2 REMARK 470 LYS A 294 CG CD CE NZ REMARK 470 ARG A 540 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 542 CG CD OE1 NE2 REMARK 470 ASP A 639 CG OD1 OD2 REMARK 470 ARG A 651 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE ARG A 454 NE ARG A 454 3756 1.09 REMARK 500 CD ARG A 454 NE ARG A 454 3756 1.43 REMARK 500 NE ARG A 454 CZ ARG A 454 3756 1.49 REMARK 500 CD ARG A 454 CD ARG A 454 3756 1.77 REMARK 500 NE ARG A 454 NH2 ARG A 454 3756 1.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 462 O - C - N ANGL. DEV. = -10.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 192 20.07 -142.38 REMARK 500 PHE A 234 39.08 -89.63 REMARK 500 ASN A 292 13.18 -152.66 REMARK 500 LYS A 294 77.23 -114.26 REMARK 500 ASN A 347 -161.85 -161.55 REMARK 500 LYS A 462 -11.82 -155.27 REMARK 500 ARG A 540 -152.91 -96.65 REMARK 500 GLN A 542 27.27 42.02 REMARK 500 GLU A 577 -110.92 -109.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 803 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 397 O REMARK 620 2 ASP A 397 OD1 67.7 REMARK 620 3 ASP A 399 O 105.2 102.5 REMARK 620 4 HIS A 401 O 164.6 98.3 83.4 REMARK 620 5 SER A 436 OG 76.0 106.3 149.0 103.3 REMARK 620 6 LEU A 437 O 75.8 136.9 65.3 119.6 85.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 399 OD1 REMARK 620 2 HIS A 401 ND1 108.6 REMARK 620 3 ASP A 529 OD2 97.6 103.0 REMARK 620 4 LBH A 801 O2 98.2 120.6 125.1 REMARK 620 N 1 2 3 DBREF 43EA A 145 740 UNP B0YEC9 B0YEC9_ASPFC 145 739 SEQRES 1 A 595 ARG PRO GLN GLU GLN ALA ALA PRO THR ALA ALA SER VAL SEQRES 2 A 595 ALA ALA ASP PHE PHE GLN ARG GLU VAL ASP LEU HIS GLN SEQRES 3 A 595 SER THR ASP LEU HIS SER LYS VAL VAL VAL VAL VAL HIS SEQRES 4 A 595 ASP ALA CYS TYR GLY HIS ARG PHE SER ARG PRO ARG THR SEQRES 5 A 595 SER LYS THR ALA LEU SER TYR ILE VAL GLU ARG PRO GLU SEQRES 6 A 595 ARG ILE GLN ALA CYS VAL VAL GLY VAL SER ALA ALA TYR SEQRES 7 A 595 VAL LEU MET ALA GLY ARG HIS ALA GLY LYS ARG PHE ALA SEQRES 8 A 595 PRO HIS PRO GLU LEU ASP LEU HIS GLN LEU PRO ALA PRO SEQRES 9 A 595 PRO PHE GLN ILE ARG LYS THR SER ARG THR MET PRO ILE SEQRES 10 A 595 THR SER ALA ALA VAL THR HIS VAL HIS GLY THR LYS TRP SEQRES 11 A 595 MET ASP GLU LEU LYS THR MET CYS ASP ALA ALA GLU SER SEQRES 12 A 595 ARG LEU ALA LEU ASN GLY LYS GLU LEU VAL ARG PRO ARG SEQRES 13 A 595 SER SER GLY LYS ASP GLY ASP SER ALA LYS LYS ALA PRO SEQRES 14 A 595 LEU ASN ASP GLY ASP LEU TYR LEU CYS SER GLU SER LEU SEQRES 15 A 595 ASN ALA PHE GLU GLY ALA LEU GLY GLY VAL CYS GLU GLY SEQRES 16 A 595 VAL ASP ALA VAL PHE ASN SER ASN THR THR LYS ARG ALA SEQRES 17 A 595 PHE VAL CYS ILE ARG PRO PRO GLY HIS HIS CYS SER THR SEQRES 18 A 595 SER HIS PRO SER GLY PHE CYS TRP ILE ASN ASN VAL HIS SEQRES 19 A 595 VAL GLY ILE THR TYR ALA ALA MET THR HIS GLY LEU THR SEQRES 20 A 595 HIS ALA ALA ILE LEU ASP PHE ASP LEU HIS HIS GLY ASP SEQRES 21 A 595 GLY SER GLN ASP ILE ALA TRP GLU GLN ASN GLN LYS ALA SEQRES 22 A 595 VAL SER ALA ALA TRP ASN ALA ALA ASN HIS LYS LYS THR SEQRES 23 A 595 ARG ILE GLY TYR PHE SER LEU HIS ASP ILE ASN SER PHE SEQRES 24 A 595 PRO CYS GLU TYR GLY ASP VAL GLU LYS VAL ARG ASN ALA SEQRES 25 A 595 SER VAL CYS ILE ASP LYS ALA HIS GLY GLN SER ILE TRP SEQRES 26 A 595 ASN VAL HIS LEU GLU THR TRP LYS SER ASP ALA GLU PHE SEQRES 27 A 595 TRP GLU ILE TYR ALA ALA LYS TYR THR ILE LEU LEU GLU SEQRES 28 A 595 LYS ALA ARG ALA PHE LEU ARG LEU HIS THR GLU ARG LEU SEQRES 29 A 595 LEU ASP SER ALA PRO GLY ASP THR PRO PRO LYS ALA ALA SEQRES 30 A 595 ILE PHE ILE SER ALA GLY PHE ASP ALA SER GLU TRP GLU SEQRES 31 A 595 GLY SER GLY MET GLN ARG HIS GLN VAL ASN VAL PRO THR SEQRES 32 A 595 GLU PHE TYR ALA LYS PHE THR ALA ASP VAL VAL GLN MET SEQRES 33 A 595 ALA GLU GLU GLU GLY LEU GLY VAL ASP GLY ARG VAL ILE SEQRES 34 A 595 SER VAL LEU GLU GLY GLY TYR SER ASN ARG ALA LEU THR SEQRES 35 A 595 SER GLY VAL LEU SER HIS LEU ALA ALA LEU GLY ASP THR SEQRES 36 A 595 THR THR LEU SER ALA ILE VAL ASN HIS GLU GLN GLN VAL SEQRES 37 A 595 GLY LEU ALA SER GLU MET PHE ASP ARG LEU HIS VAL SER SEQRES 38 A 595 ASP SER ASN ALA PRO ALA GLU ALA LEU ARG THR PRO SER SEQRES 39 A 595 ASP ILE GLY TYR ASP SER GLN TRP TRP ALA PRO THR ARG SEQRES 40 A 595 LEU ASP GLU LEU GLU ALA LEU VAL TYR PRO PRO PRO SER SEQRES 41 A 595 THR ALA PRO LYS SER LYS SER ALA ARG THR TYR PHE ALA SEQRES 42 A 595 PRO THR GLN SER PHE ALA ALA LYS VAL VAL ALA ALA PRO SEQRES 43 A 595 ARG ASP ARG LYS SER THR GLY SER PRO ALA GLY SER ASP SEQRES 44 A 595 VAL VAL PRO LEU PRO GLU VAL GLY TRP ALA THR ALA ALA SEQRES 45 A 595 HIS GLU LEU SER LYS VAL LEU ILE PRO SER HIS ARG GLN SEQRES 46 A 595 THR THR SER TYR ARG PRO GLU GLU LEU ASN HET LBH A 801 26 HET ZN A 802 1 HET K A 803 1 HETNAM LBH PANOBINOSTAT HETNAM ZN ZINC ION HETNAM K POTASSIUM ION FORMUL 2 LBH C21 H23 N3 O2 FORMUL 3 ZN ZN 2+ FORMUL 4 K K 1+ FORMUL 5 HOH *325(H2 O) HELIX 1 AA1 THR A 153 THR A 172 1 20 HELIX 2 AA2 ASP A 184 GLY A 188 5 5 HELIX 3 AA3 SER A 197 TYR A 203 1 7 HELIX 4 AA4 PRO A 208 GLY A 227 1 20 HELIX 5 AA5 SER A 263 GLY A 271 1 9 HELIX 6 AA6 GLY A 271 GLY A 293 1 23 HELIX 7 AA7 GLU A 324 ASN A 345 1 22 HELIX 8 AA8 ASN A 375 HIS A 388 1 14 HELIX 9 AA9 GLY A 403 SER A 419 1 17 HELIX 10 AB1 ALA A 425 THR A 430 1 6 HELIX 11 AB2 ASP A 449 ALA A 456 1 8 HELIX 12 AB3 LYS A 462 GLN A 466 5 5 HELIX 13 AB4 SER A 478 LYS A 489 1 12 HELIX 14 AB5 THR A 491 ASP A 510 1 20 HELIX 15 AB6 THR A 547 GLU A 562 1 16 HELIX 16 AB7 SER A 581 GLY A 597 1 17 HELIX 17 AB8 THR A 599 VAL A 606 1 8 HELIX 18 AB9 ASP A 643 TRP A 647 5 5 HELIX 19 AC1 ALA A 648 TYR A 660 1 13 HELIX 20 AC2 TRP A 713 ILE A 725 1 13 HELIX 21 AC3 ARG A 735 LEU A 739 5 5 SHEET 1 AA1 9 GLN A 251 LYS A 254 0 SHEET 2 AA1 9 VAL A 178 VAL A 182 1 N VAL A 180 O ARG A 253 SHEET 3 AA1 9 ARG A 351 CYS A 355 1 O CYS A 355 N VAL A 181 SHEET 4 AA1 9 VAL A 572 LEU A 576 1 O SER A 574 N ALA A 352 SHEET 5 AA1 9 ALA A 520 ALA A 526 1 N ILE A 522 O ILE A 573 SHEET 6 AA1 9 HIS A 392 ASP A 397 1 N LEU A 396 O PHE A 523 SHEET 7 AA1 9 ARG A 431 HIS A 438 1 O GLY A 433 N ILE A 395 SHEET 8 AA1 9 SER A 467 HIS A 472 1 O VAL A 471 N SER A 436 SHEET 9 AA1 9 CYS A 459 ILE A 460 -1 N ILE A 460 O ILE A 468 LINK O ASP A 397 K K A 803 1555 1555 2.95 LINK OD1 ASP A 397 K K A 803 1555 1555 2.75 LINK OD1 ASP A 399 ZN ZN A 802 1555 1555 2.10 LINK O ASP A 399 K K A 803 1555 1555 2.67 LINK ND1 HIS A 401 ZN ZN A 802 1555 1555 2.15 LINK O HIS A 401 K K A 803 1555 1555 2.90 LINK OG SER A 436 K K A 803 1555 1555 2.72 LINK O LEU A 437 K K A 803 1555 1555 2.70 LINK OD2 ASP A 529 ZN ZN A 802 1555 1555 2.03 LINK O2 LBH A 801 ZN ZN A 802 1555 1555 1.91 CISPEP 1 ARG A 357 PRO A 358 0 -0.74 CISPEP 2 PHE A 443 PRO A 444 0 -0.12 CRYST1 69.980 108.430 165.490 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014290 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009223 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006043 0.00000 CONECT 1741 3808 CONECT 1744 3808 CONECT 1760 3808 CONECT 1763 3807 CONECT 1776 3808 CONECT 1779 3807 CONECT 2057 3808 CONECT 2061 3808 CONECT 2803 3807 CONECT 3781 3782 CONECT 3782 3781 3783 3785 CONECT 3783 3782 3784 CONECT 3784 3783 3807 CONECT 3785 3782 3786 CONECT 3786 3785 3787 CONECT 3787 3786 3788 3790 CONECT 3788 3787 3789 CONECT 3789 3788 3792 CONECT 3790 3787 3791 CONECT 3791 3790 3792 CONECT 3792 3789 3791 3793 CONECT 3793 3792 3794 CONECT 3794 3793 3795 CONECT 3795 3794 3796 CONECT 3796 3795 3797 CONECT 3797 3796 3798 3801 CONECT 3798 3797 3799 3806 CONECT 3799 3798 3800 3803 CONECT 3800 3799 3801 CONECT 3801 3797 3800 3802 CONECT 3802 3801 CONECT 3803 3799 3804 CONECT 3804 3803 3805 CONECT 3805 3804 3806 CONECT 3806 3798 3805 CONECT 3807 1763 1779 2803 3784 CONECT 3808 1741 1744 1760 1776 CONECT 3808 2057 2061 MASTER 438 0 3 21 9 0 0 6 4132 1 38 46 END