data_446D # _entry.id 446D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 446D pdb_0000446d 10.2210/pdb446d/pdb RCSB UD0004 ? ? WWPDB D_1000179235 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-03-18 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 19 4 'Structure model' '_pdbx_struct_conn_angle.value' 20 4 'Structure model' '_struct_conn.pdbx_dist_value' 21 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 22 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 23 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 28 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 35 4 'Structure model' '_struct_conn.ptnr2_symmetry' 36 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 37 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 38 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 446D _pdbx_database_status.recvd_initial_deposition_date 1999-01-15 _pdbx_database_status.deposit_site NDB _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Abrescia, N.G.A.' 1 'Malinina, L.' 2 'Gonzaga, L.F.' 3 'Huynh-Dinh, T.' 4 'Neidle, S.' 5 'Subirana, J.A.' 6 # _citation.id primary _citation.title 'Structure of the oligonucleotide d(CGTATATACG) as a site-specific complex with nickel ions.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 27 _citation.page_first 1593 _citation.page_last 1599 _citation.year 1999 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10075989 _citation.pdbx_database_id_DOI 10.1093/nar/27.7.1593 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Abrescia, N.G.' 1 ? primary 'Malinina, L.' 2 ? primary 'Fernandez, L.G.' 3 ? primary 'Huynh-Dinh, T.' 4 ? primary 'Neidle, S.' 5 ? primary 'Subirana, J.A.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*GP*TP*AP*TP*AP*TP*AP*CP*G)-3') ; 3044.017 4 ? ? ? ? 2 non-polymer syn 'NICKEL (II) ION' 58.693 9 ? ? ? ? 3 water nat water 18.015 61 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DT)(DA)(DT)(DA)(DT)(DA)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGTATATACG _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NICKEL (II) ION' NI 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DT n 1 4 DA n 1 5 DT n 1 6 DA n 1 7 DT n 1 8 DA n 1 9 DC n 1 10 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC CYT A . n A 1 2 DG 2 2 2 DG GUA A . n A 1 3 DT 3 3 3 DT THY A . n A 1 4 DA 4 4 4 DA ADE A . n A 1 5 DT 5 5 5 DT THY A . n A 1 6 DA 6 6 6 DA ADE A . n A 1 7 DT 7 7 7 DT THY A . n A 1 8 DA 8 8 8 DA ADE A . n A 1 9 DC 9 9 9 DC CYT A . n A 1 10 DG 10 10 10 DG GUA A . n B 1 1 DC 1 11 ? ? ? B . n B 1 2 DG 2 12 12 DG GUA B . n B 1 3 DT 3 13 13 DT THY B . n B 1 4 DA 4 14 14 DA ADE B . n B 1 5 DT 5 15 15 DT THY B . n B 1 6 DA 6 16 16 DA ADE B . n B 1 7 DT 7 17 17 DT THY B . n B 1 8 DA 8 18 18 DA ADE B . n B 1 9 DC 9 19 19 DC CYT B . n B 1 10 DG 10 20 20 DG GUA B . n C 1 1 DC 1 21 21 DC CYT C . n C 1 2 DG 2 22 22 DG GUA C . n C 1 3 DT 3 23 23 DT THY C . n C 1 4 DA 4 24 24 DA ADE C . n C 1 5 DT 5 25 25 DT THY C . n C 1 6 DA 6 26 26 DA ADE C . n C 1 7 DT 7 27 27 DT THY C . n C 1 8 DA 8 28 28 DA ADE C . n C 1 9 DC 9 29 29 DC CYT C . n C 1 10 DG 10 30 30 DG GUA C . n D 1 1 DC 1 31 31 DC CYT D . n D 1 2 DG 2 32 32 DG GUA D . n D 1 3 DT 3 33 33 DT THY D . n D 1 4 DA 4 34 34 DA ADE D . n D 1 5 DT 5 35 35 DT THY D . n D 1 6 DA 6 36 36 DA ADE D . n D 1 7 DT 7 37 37 DT THY D . n D 1 8 DA 8 38 38 DA ADE D . n D 1 9 DC 9 39 39 DC CYT D . n D 1 10 DG 10 40 40 DG GUA D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NI 1 11 100 NI NI A . F 2 NI 1 12 300 NI NI A . G 2 NI 1 13 800 NI NI A . H 2 NI 1 14 900 NI NI A . I 2 NI 1 7 200 NI NI B . J 2 NI 1 5 500 NI NI B . K 2 NI 1 1 600 NI NI C . L 2 NI 1 9 400 NI NI D . M 2 NI 1 2 700 NI NI D . N 3 HOH 1 15 100 HOH HOH A . N 3 HOH 2 16 100 HOH HOH A . N 3 HOH 3 17 100 HOH HOH A . N 3 HOH 4 18 100 HOH HOH A . N 3 HOH 5 19 300 HOH HOH A . N 3 HOH 6 20 300 HOH HOH A . N 3 HOH 7 21 300 HOH HOH A . N 3 HOH 8 22 300 HOH HOH A . N 3 HOH 9 23 300 HOH HOH A . N 3 HOH 10 24 800 HOH HOH A . N 3 HOH 11 25 800 HOH HOH A . N 3 HOH 12 26 800 HOH HOH A . N 3 HOH 13 27 800 HOH HOH A . N 3 HOH 14 28 800 HOH HOH A . N 3 HOH 15 29 800 HOH HOH A . N 3 HOH 16 30 900 HOH HOH A . N 3 HOH 17 31 900 HOH HOH A . N 3 HOH 18 32 900 HOH HOH A . N 3 HOH 19 33 900 HOH HOH A . N 3 HOH 20 34 900 HOH HOH A . N 3 HOH 21 35 900 HOH HOH A . N 3 HOH 22 36 50 HOH H2O A . N 3 HOH 23 37 52 HOH H2O A . N 3 HOH 24 38 55 HOH H2O A . N 3 HOH 25 39 56 HOH H2O A . N 3 HOH 26 40 59 HOH H2O A . N 3 HOH 27 41 60 HOH H2O A . N 3 HOH 28 42 61 HOH H2O A . N 3 HOH 29 43 62 HOH H2O A . N 3 HOH 30 44 64 HOH H2O A . O 3 HOH 1 21 200 HOH HOH B . O 3 HOH 2 22 200 HOH HOH B . O 3 HOH 3 23 200 HOH HOH B . O 3 HOH 4 24 200 HOH HOH B . O 3 HOH 5 25 200 HOH HOH B . O 3 HOH 6 26 500 HOH HOH B . O 3 HOH 7 27 500 HOH HOH B . O 3 HOH 8 28 500 HOH HOH B . O 3 HOH 9 29 500 HOH HOH B . O 3 HOH 10 30 500 HOH HOH B . O 3 HOH 11 31 51 HOH H2O B . O 3 HOH 12 32 53 HOH H2O B . O 3 HOH 13 33 57 HOH H2O B . P 3 HOH 1 34 600 HOH HOH C . P 3 HOH 2 35 600 HOH HOH C . P 3 HOH 3 36 600 HOH HOH C . P 3 HOH 4 37 600 HOH HOH C . P 3 HOH 5 38 600 HOH HOH C . Q 3 HOH 1 41 400 HOH HOH D . Q 3 HOH 2 42 400 HOH HOH D . Q 3 HOH 3 43 400 HOH HOH D . Q 3 HOH 4 44 400 HOH HOH D . Q 3 HOH 5 45 400 HOH HOH D . Q 3 HOH 6 46 700 HOH HOH D . Q 3 HOH 7 47 700 HOH HOH D . Q 3 HOH 8 48 700 HOH HOH D . Q 3 HOH 9 49 700 HOH HOH D . Q 3 HOH 10 50 700 HOH HOH D . Q 3 HOH 11 51 54 HOH H2O D . Q 3 HOH 12 52 58 HOH H2O D . Q 3 HOH 13 53 63 HOH H2O D . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A DC 1 ? "O5'" ? A DC 1 "O5'" 2 1 Y 1 A DC 1 ? "C5'" ? A DC 1 "C5'" 3 1 Y 1 A DC 1 ? "C4'" ? A DC 1 "C4'" 4 1 Y 1 A DC 1 ? "O4'" ? A DC 1 "O4'" 5 1 Y 1 A DC 1 ? "C3'" ? A DC 1 "C3'" 6 1 Y 1 A DC 1 ? "C2'" ? A DC 1 "C2'" 7 1 Y 1 A DC 1 ? "C1'" ? A DC 1 "C1'" 8 1 Y 1 A DC 1 ? N1 ? A DC 1 N1 9 1 Y 1 A DC 1 ? C2 ? A DC 1 C2 10 1 Y 1 A DC 1 ? O2 ? A DC 1 O2 11 1 Y 1 A DC 1 ? N3 ? A DC 1 N3 12 1 Y 1 A DC 1 ? C4 ? A DC 1 C4 13 1 Y 1 A DC 1 ? N4 ? A DC 1 N4 14 1 Y 1 A DC 1 ? C5 ? A DC 1 C5 15 1 Y 1 A DC 1 ? C6 ? A DC 1 C6 16 1 Y 1 C DC 21 ? "O5'" ? C DC 1 "O5'" 17 1 Y 1 C DC 21 ? "C5'" ? C DC 1 "C5'" 18 1 Y 1 C DC 21 ? "C4'" ? C DC 1 "C4'" 19 1 Y 1 C DC 21 ? "O4'" ? C DC 1 "O4'" 20 1 Y 1 C DC 21 ? "C3'" ? C DC 1 "C3'" 21 1 Y 1 C DC 21 ? "C2'" ? C DC 1 "C2'" 22 1 Y 1 C DC 21 ? "C1'" ? C DC 1 "C1'" 23 1 Y 1 C DC 21 ? N1 ? C DC 1 N1 24 1 Y 1 C DC 21 ? C2 ? C DC 1 C2 25 1 Y 1 C DC 21 ? O2 ? C DC 1 O2 26 1 Y 1 C DC 21 ? N3 ? C DC 1 N3 27 1 Y 1 C DC 21 ? C4 ? C DC 1 C4 28 1 Y 1 C DC 21 ? N4 ? C DC 1 N4 29 1 Y 1 C DC 21 ? C5 ? C DC 1 C5 30 1 Y 1 C DC 21 ? C6 ? C DC 1 C6 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 X-PLOR refinement 3.851 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 446D _cell.length_a 52.460 _cell.length_b 52.460 _cell.length_c 101.490 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 446D _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting tetragonal _symmetry.Int_Tables_number 92 # _exptl.entry_id 446D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 55.52 _exptl_crystal.density_Matthews 2.77 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293.00 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.00 _exptl_crystal_grow.pdbx_details 'pH 6.00, VAPOR DIFFUSION, HANGING DROP, temperature 293.00K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 110.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'FOCUSING MIRRORS' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 446D _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.000 _reflns.d_resolution_high 2.800 _reflns.number_obs 3841 _reflns.number_all ? _reflns.percent_possible_obs 99.400 _reflns.pdbx_Rmerge_I_obs 0.0710000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.800 _reflns_shell.d_res_low 2.850 _reflns_shell.percent_possible_all 69.90 _reflns_shell.Rmerge_I_obs 0.4050000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 446D _refine.ls_number_reflns_obs 2427 _refine.ls_number_reflns_all 3015 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.000 _refine.ls_d_res_high 3.000 _refine.ls_percent_reflns_obs 82.330 _refine.ls_R_factor_obs 0.2040000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2040000 _refine.ls_R_factor_R_free 0.2530000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 258 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 762 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.number_atoms_solvent 61 _refine_hist.number_atoms_total 832 _refine_hist.d_res_high 3.000 _refine_hist.d_res_low 8.000 # _database_PDB_matrix.entry_id 446D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 446D _struct.title 'STRUCTURE OF THE OLIGONUCLEOTIDE D(CGTATATACG) AS A SITE SPECIFIC COMPLEX WITH NICKEL IONS' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 446D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'TRIPLE HELIX, NICKEL BINDING, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 2 ? M N N 2 ? N N N 3 ? O N N 3 ? P N N 3 ? Q N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 446D _struct_ref.pdbx_db_accession 446D _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 446D A 1 ? 10 ? 446D 1 ? 10 ? 1 10 2 1 446D B 1 ? 10 ? 446D 11 ? 20 ? 11 20 3 1 446D C 1 ? 10 ? 446D 21 ? 30 ? 21 30 4 1 446D D 1 ? 10 ? 446D 31 ? 40 ? 31 40 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F,G,H,I,J,N,O 2 1 C,D,K,L,M,P,Q # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 2 N7 ? ? ? 1_555 F NI . NI ? ? A DG 2 A NI 12 1_555 ? ? ? ? ? ? ? 1.969 ? ? metalc2 metalc ? ? A DG 10 N7 ? ? ? 1_555 E NI . NI ? ? A DG 10 A NI 11 1_555 ? ? ? ? ? ? ? 1.920 ? ? metalc3 metalc ? ? E NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 11 A HOH 15 1_555 ? ? ? ? ? ? ? 2.015 ? ? metalc4 metalc ? ? E NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 11 A HOH 16 1_555 ? ? ? ? ? ? ? 2.103 ? ? metalc5 metalc ? ? E NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 11 A HOH 17 1_555 ? ? ? ? ? ? ? 1.958 ? ? metalc6 metalc ? ? E NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 11 A HOH 18 1_555 ? ? ? ? ? ? ? 2.149 ? ? metalc7 metalc ? ? E NI . NI ? ? ? 1_555 C DG 10 N7 ? ? A NI 11 C DG 30 3_545 ? ? ? ? ? ? ? 1.737 ? ? metalc8 metalc ? ? F NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 12 A HOH 19 1_555 ? ? ? ? ? ? ? 2.067 ? ? metalc9 metalc ? ? F NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 12 A HOH 20 1_555 ? ? ? ? ? ? ? 2.054 ? ? metalc10 metalc ? ? F NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 12 A HOH 21 1_555 ? ? ? ? ? ? ? 2.142 ? ? metalc11 metalc ? ? F NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 12 A HOH 22 1_555 ? ? ? ? ? ? ? 1.998 ? ? metalc12 metalc ? ? F NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 12 A HOH 23 1_555 ? ? ? ? ? ? ? 2.144 ? ? metalc13 metalc ? ? G NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 13 A HOH 24 1_555 ? ? ? ? ? ? ? 2.027 ? ? metalc14 metalc ? ? G NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 13 A HOH 25 1_555 ? ? ? ? ? ? ? 2.064 ? ? metalc15 metalc ? ? G NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 13 A HOH 26 1_555 ? ? ? ? ? ? ? 2.104 ? ? metalc16 metalc ? ? G NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 13 A HOH 27 1_555 ? ? ? ? ? ? ? 2.025 ? ? metalc17 metalc ? ? G NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 13 A HOH 28 1_555 ? ? ? ? ? ? ? 2.148 ? ? metalc18 metalc ? ? G NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 13 A HOH 29 1_555 ? ? ? ? ? ? ? 2.165 ? ? metalc19 metalc ? ? H NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 14 A HOH 30 1_555 ? ? ? ? ? ? ? 1.990 ? ? metalc20 metalc ? ? H NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 14 A HOH 31 1_555 ? ? ? ? ? ? ? 2.029 ? ? metalc21 metalc ? ? H NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 14 A HOH 32 1_555 ? ? ? ? ? ? ? 2.097 ? ? metalc22 metalc ? ? H NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 14 A HOH 33 1_555 ? ? ? ? ? ? ? 1.919 ? ? metalc23 metalc ? ? H NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 14 A HOH 34 1_555 ? ? ? ? ? ? ? 2.135 ? ? metalc24 metalc ? ? H NI . NI ? ? ? 1_555 N HOH . O ? ? A NI 14 A HOH 35 1_555 ? ? ? ? ? ? ? 2.106 ? ? metalc25 metalc ? ? J NI . NI ? ? ? 1_555 B DG 10 N7 ? ? B NI 5 B DG 20 1_555 ? ? ? ? ? ? ? 1.837 ? ? metalc26 metalc ? ? J NI . NI ? ? ? 1_555 O HOH . O ? ? B NI 5 B HOH 26 1_555 ? ? ? ? ? ? ? 2.064 ? ? metalc27 metalc ? ? J NI . NI ? ? ? 1_555 O HOH . O ? ? B NI 5 B HOH 27 1_555 ? ? ? ? ? ? ? 2.056 ? ? metalc28 metalc ? ? J NI . NI ? ? ? 1_555 O HOH . O ? ? B NI 5 B HOH 28 1_555 ? ? ? ? ? ? ? 2.064 ? ? metalc29 metalc ? ? J NI . NI ? ? ? 1_555 O HOH . O ? ? B NI 5 B HOH 29 1_555 ? ? ? ? ? ? ? 2.074 ? ? metalc30 metalc ? ? J NI . NI ? ? ? 1_555 O HOH . O ? ? B NI 5 B HOH 30 1_555 ? ? ? ? ? ? ? 2.139 ? ? metalc31 metalc ? ? I NI . NI ? ? ? 1_555 B DG 2 N7 ? ? B NI 7 B DG 12 1_555 ? ? ? ? ? ? ? 2.173 ? ? metalc32 metalc ? ? I NI . NI ? ? ? 1_555 O HOH . O ? ? B NI 7 B HOH 21 1_555 ? ? ? ? ? ? ? 2.042 ? ? metalc33 metalc ? ? I NI . NI ? ? ? 1_555 O HOH . O ? ? B NI 7 B HOH 22 1_555 ? ? ? ? ? ? ? 2.080 ? ? metalc34 metalc ? ? I NI . NI ? ? ? 1_555 O HOH . O ? ? B NI 7 B HOH 23 1_555 ? ? ? ? ? ? ? 2.083 ? ? metalc35 metalc ? ? I NI . NI ? ? ? 1_555 O HOH . O ? ? B NI 7 B HOH 24 1_555 ? ? ? ? ? ? ? 2.047 ? ? metalc36 metalc ? ? I NI . NI ? ? ? 1_555 O HOH . O ? ? B NI 7 B HOH 25 1_555 ? ? ? ? ? ? ? 2.132 ? ? metalc37 metalc ? ? K NI . NI ? ? ? 1_555 C DG 2 N7 ? ? C NI 1 C DG 22 1_555 ? ? ? ? ? ? ? 1.873 ? ? metalc38 metalc ? ? K NI . NI ? ? ? 1_555 P HOH . O ? ? C NI 1 C HOH 34 1_555 ? ? ? ? ? ? ? 2.008 ? ? metalc39 metalc ? ? K NI . NI ? ? ? 1_555 P HOH . O ? ? C NI 1 C HOH 35 1_555 ? ? ? ? ? ? ? 2.109 ? ? metalc40 metalc ? ? K NI . NI ? ? ? 1_555 P HOH . O ? ? C NI 1 C HOH 36 1_555 ? ? ? ? ? ? ? 2.068 ? ? metalc41 metalc ? ? K NI . NI ? ? ? 1_555 P HOH . O ? ? C NI 1 C HOH 37 1_555 ? ? ? ? ? ? ? 2.069 ? ? metalc42 metalc ? ? K NI . NI ? ? ? 1_555 P HOH . O ? ? C NI 1 C HOH 38 1_555 ? ? ? ? ? ? ? 2.054 ? ? metalc43 metalc ? ? M NI . NI ? ? ? 1_555 D DG 10 N7 ? ? D NI 2 D DG 40 1_555 ? ? ? ? ? ? ? 1.959 ? ? metalc44 metalc ? ? M NI . NI ? ? ? 1_555 Q HOH . O ? ? D NI 2 D HOH 46 1_555 ? ? ? ? ? ? ? 2.039 ? ? metalc45 metalc ? ? M NI . NI ? ? ? 1_555 Q HOH . O ? ? D NI 2 D HOH 47 1_555 ? ? ? ? ? ? ? 2.108 ? ? metalc46 metalc ? ? M NI . NI ? ? ? 1_555 Q HOH . O ? ? D NI 2 D HOH 48 1_555 ? ? ? ? ? ? ? 2.042 ? ? metalc47 metalc ? ? M NI . NI ? ? ? 1_555 Q HOH . O ? ? D NI 2 D HOH 49 1_555 ? ? ? ? ? ? ? 2.092 ? ? metalc48 metalc ? ? M NI . NI ? ? ? 1_555 Q HOH . O ? ? D NI 2 D HOH 50 1_555 ? ? ? ? ? ? ? 2.115 ? ? metalc49 metalc ? ? L NI . NI ? ? ? 1_555 D DG 2 N7 ? ? D NI 9 D DG 32 1_555 ? ? ? ? ? ? ? 2.244 ? ? metalc50 metalc ? ? L NI . NI ? ? ? 1_555 Q HOH . O ? ? D NI 9 D HOH 41 1_555 ? ? ? ? ? ? ? 2.018 ? ? metalc51 metalc ? ? L NI . NI ? ? ? 1_555 Q HOH . O ? ? D NI 9 D HOH 42 1_555 ? ? ? ? ? ? ? 2.109 ? ? metalc52 metalc ? ? L NI . NI ? ? ? 1_555 Q HOH . O ? ? D NI 9 D HOH 43 1_555 ? ? ? ? ? ? ? 2.056 ? ? metalc53 metalc ? ? L NI . NI ? ? ? 1_555 Q HOH . O ? ? D NI 9 D HOH 44 1_555 ? ? ? ? ? ? ? 2.058 ? ? metalc54 metalc ? ? L NI . NI ? ? ? 1_555 Q HOH . O ? ? D NI 9 D HOH 45 1_555 ? ? ? ? ? ? ? 2.004 ? ? hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 2 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 2 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 2 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N2 ? ? ? 1_555 C DG 10 N3 ? ? A DG 2 C DG 30 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog5 hydrog ? ? A DG 2 N3 ? ? ? 1_555 C DG 10 N2 ? ? A DG 2 C DG 30 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog6 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 8 N1 ? ? A DT 3 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 8 N6 ? ? A DT 3 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 4 B DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 4 B DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 5 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 5 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 6 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 6 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 7 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 7 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 8 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 8 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 9 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 9 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 9 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 10 N2 ? ? ? 1_555 D DG 2 N3 ? ? B DG 20 D DG 32 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog22 hydrog ? ? B DG 10 N3 ? ? ? 1_555 D DG 2 N2 ? ? B DG 20 D DG 32 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog23 hydrog ? ? C DG 2 N1 ? ? ? 1_555 D DC 9 N3 ? ? C DG 22 D DC 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 2 N2 ? ? ? 1_555 D DC 9 O2 ? ? C DG 22 D DC 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 2 O6 ? ? ? 1_555 D DC 9 N4 ? ? C DG 22 D DC 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 8 N1 ? ? C DT 23 D DA 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 8 N6 ? ? C DT 23 D DA 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 7 N3 ? ? C DA 24 D DT 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 7 O4 ? ? C DA 24 D DT 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DT 5 N3 ? ? ? 1_555 D DA 6 N1 ? ? C DT 25 D DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DT 5 O4 ? ? ? 1_555 D DA 6 N6 ? ? C DT 25 D DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DA 6 N1 ? ? ? 1_555 D DT 5 N3 ? ? C DA 26 D DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DA 6 N6 ? ? ? 1_555 D DT 5 O4 ? ? C DA 26 D DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DT 7 N3 ? ? ? 1_555 D DA 4 N1 ? ? C DT 27 D DA 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DT 7 O4 ? ? ? 1_555 D DA 4 N6 ? ? C DT 27 D DA 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DA 8 N1 ? ? ? 1_555 D DT 3 N3 ? ? C DA 28 D DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DA 8 N6 ? ? ? 1_555 D DT 3 O4 ? ? C DA 28 D DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DC 9 N3 ? ? ? 1_555 D DG 2 N1 ? ? C DC 29 D DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DC 9 N4 ? ? ? 1_555 D DG 2 O6 ? ? C DC 29 D DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DC 9 O2 ? ? ? 1_555 D DG 2 N2 ? ? C DC 29 D DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? A DG 2 ? A DG 2 ? 1_555 NI ? F NI . ? A NI 12 ? 1_555 O ? N HOH . ? A HOH 19 ? 1_555 103.4 ? 2 N7 ? A DG 2 ? A DG 2 ? 1_555 NI ? F NI . ? A NI 12 ? 1_555 O ? N HOH . ? A HOH 20 ? 1_555 81.5 ? 3 O ? N HOH . ? A HOH 19 ? 1_555 NI ? F NI . ? A NI 12 ? 1_555 O ? N HOH . ? A HOH 20 ? 1_555 170.8 ? 4 N7 ? A DG 2 ? A DG 2 ? 1_555 NI ? F NI . ? A NI 12 ? 1_555 O ? N HOH . ? A HOH 21 ? 1_555 81.8 ? 5 O ? N HOH . ? A HOH 19 ? 1_555 NI ? F NI . ? A NI 12 ? 1_555 O ? N HOH . ? A HOH 21 ? 1_555 86.3 ? 6 O ? N HOH . ? A HOH 20 ? 1_555 NI ? F NI . ? A NI 12 ? 1_555 O ? N HOH . ? A HOH 21 ? 1_555 86.7 ? 7 N7 ? A DG 2 ? A DG 2 ? 1_555 NI ? F NI . ? A NI 12 ? 1_555 O ? N HOH . ? A HOH 22 ? 1_555 104.3 ? 8 O ? N HOH . ? A HOH 19 ? 1_555 NI ? F NI . ? A NI 12 ? 1_555 O ? N HOH . ? A HOH 22 ? 1_555 91.6 ? 9 O ? N HOH . ? A HOH 20 ? 1_555 NI ? F NI . ? A NI 12 ? 1_555 O ? N HOH . ? A HOH 22 ? 1_555 94.7 ? 10 O ? N HOH . ? A HOH 21 ? 1_555 NI ? F NI . ? A NI 12 ? 1_555 O ? N HOH . ? A HOH 22 ? 1_555 173.9 ? 11 N7 ? A DG 2 ? A DG 2 ? 1_555 NI ? F NI . ? A NI 12 ? 1_555 O ? N HOH . ? A HOH 23 ? 1_555 162.7 ? 12 O ? N HOH . ? A HOH 19 ? 1_555 NI ? F NI . ? A NI 12 ? 1_555 O ? N HOH . ? A HOH 23 ? 1_555 86.6 ? 13 O ? N HOH . ? A HOH 20 ? 1_555 NI ? F NI . ? A NI 12 ? 1_555 O ? N HOH . ? A HOH 23 ? 1_555 86.8 ? 14 O ? N HOH . ? A HOH 21 ? 1_555 NI ? F NI . ? A NI 12 ? 1_555 O ? N HOH . ? A HOH 23 ? 1_555 84.8 ? 15 O ? N HOH . ? A HOH 22 ? 1_555 NI ? F NI . ? A NI 12 ? 1_555 O ? N HOH . ? A HOH 23 ? 1_555 89.3 ? 16 N7 ? A DG 10 ? A DG 10 ? 1_555 NI ? E NI . ? A NI 11 ? 1_555 O ? N HOH . ? A HOH 15 ? 1_555 92.4 ? 17 N7 ? A DG 10 ? A DG 10 ? 1_555 NI ? E NI . ? A NI 11 ? 1_555 O ? N HOH . ? A HOH 16 ? 1_555 83.6 ? 18 O ? N HOH . ? A HOH 15 ? 1_555 NI ? E NI . ? A NI 11 ? 1_555 O ? N HOH . ? A HOH 16 ? 1_555 173.9 ? 19 N7 ? A DG 10 ? A DG 10 ? 1_555 NI ? E NI . ? A NI 11 ? 1_555 O ? N HOH . ? A HOH 17 ? 1_555 81.5 ? 20 O ? N HOH . ? A HOH 15 ? 1_555 NI ? E NI . ? A NI 11 ? 1_555 O ? N HOH . ? A HOH 17 ? 1_555 95.8 ? 21 O ? N HOH . ? A HOH 16 ? 1_555 NI ? E NI . ? A NI 11 ? 1_555 O ? N HOH . ? A HOH 17 ? 1_555 88.2 ? 22 N7 ? A DG 10 ? A DG 10 ? 1_555 NI ? E NI . ? A NI 11 ? 1_555 O ? N HOH . ? A HOH 18 ? 1_555 96.3 ? 23 O ? N HOH . ? A HOH 15 ? 1_555 NI ? E NI . ? A NI 11 ? 1_555 O ? N HOH . ? A HOH 18 ? 1_555 89.2 ? 24 O ? N HOH . ? A HOH 16 ? 1_555 NI ? E NI . ? A NI 11 ? 1_555 O ? N HOH . ? A HOH 18 ? 1_555 86.6 ? 25 O ? N HOH . ? A HOH 17 ? 1_555 NI ? E NI . ? A NI 11 ? 1_555 O ? N HOH . ? A HOH 18 ? 1_555 174.6 ? 26 N7 ? A DG 10 ? A DG 10 ? 1_555 NI ? E NI . ? A NI 11 ? 1_555 N7 ? C DG 10 ? C DG 30 ? 3_545 172.7 ? 27 O ? N HOH . ? A HOH 15 ? 1_555 NI ? E NI . ? A NI 11 ? 1_555 N7 ? C DG 10 ? C DG 30 ? 3_545 81.7 ? 28 O ? N HOH . ? A HOH 16 ? 1_555 NI ? E NI . ? A NI 11 ? 1_555 N7 ? C DG 10 ? C DG 30 ? 3_545 102.6 ? 29 O ? N HOH . ? A HOH 17 ? 1_555 NI ? E NI . ? A NI 11 ? 1_555 N7 ? C DG 10 ? C DG 30 ? 3_545 94.7 ? 30 O ? N HOH . ? A HOH 18 ? 1_555 NI ? E NI . ? A NI 11 ? 1_555 N7 ? C DG 10 ? C DG 30 ? 3_545 88.0 ? 31 O ? N HOH . ? A HOH 24 ? 1_555 NI ? G NI . ? A NI 13 ? 1_555 O ? N HOH . ? A HOH 25 ? 1_555 93.4 ? 32 O ? N HOH . ? A HOH 24 ? 1_555 NI ? G NI . ? A NI 13 ? 1_555 O ? N HOH . ? A HOH 26 ? 1_555 92.9 ? 33 O ? N HOH . ? A HOH 25 ? 1_555 NI ? G NI . ? A NI 13 ? 1_555 O ? N HOH . ? A HOH 26 ? 1_555 172.4 ? 34 O ? N HOH . ? A HOH 24 ? 1_555 NI ? G NI . ? A NI 13 ? 1_555 O ? N HOH . ? A HOH 27 ? 1_555 97.5 ? 35 O ? N HOH . ? A HOH 25 ? 1_555 NI ? G NI . ? A NI 13 ? 1_555 O ? N HOH . ? A HOH 27 ? 1_555 91.8 ? 36 O ? N HOH . ? A HOH 26 ? 1_555 NI ? G NI . ? A NI 13 ? 1_555 O ? N HOH . ? A HOH 27 ? 1_555 91.7 ? 37 O ? N HOH . ? A HOH 24 ? 1_555 NI ? G NI . ? A NI 13 ? 1_555 O ? N HOH . ? A HOH 28 ? 1_555 89.4 ? 38 O ? N HOH . ? A HOH 25 ? 1_555 NI ? G NI . ? A NI 13 ? 1_555 O ? N HOH . ? A HOH 28 ? 1_555 88.3 ? 39 O ? N HOH . ? A HOH 26 ? 1_555 NI ? G NI . ? A NI 13 ? 1_555 O ? N HOH . ? A HOH 28 ? 1_555 87.4 ? 40 O ? N HOH . ? A HOH 27 ? 1_555 NI ? G NI . ? A NI 13 ? 1_555 O ? N HOH . ? A HOH 28 ? 1_555 173.1 ? 41 O ? N HOH . ? A HOH 24 ? 1_555 NI ? G NI . ? A NI 13 ? 1_555 O ? N HOH . ? A HOH 29 ? 1_555 174.6 ? 42 O ? N HOH . ? A HOH 25 ? 1_555 NI ? G NI . ? A NI 13 ? 1_555 O ? N HOH . ? A HOH 29 ? 1_555 85.8 ? 43 O ? N HOH . ? A HOH 26 ? 1_555 NI ? G NI . ? A NI 13 ? 1_555 O ? N HOH . ? A HOH 29 ? 1_555 87.6 ? 44 O ? N HOH . ? A HOH 27 ? 1_555 NI ? G NI . ? A NI 13 ? 1_555 O ? N HOH . ? A HOH 29 ? 1_555 87.8 ? 45 O ? N HOH . ? A HOH 28 ? 1_555 NI ? G NI . ? A NI 13 ? 1_555 O ? N HOH . ? A HOH 29 ? 1_555 85.3 ? 46 O ? N HOH . ? A HOH 30 ? 1_555 NI ? H NI . ? A NI 14 ? 1_555 O ? N HOH . ? A HOH 31 ? 1_555 92.4 ? 47 O ? N HOH . ? A HOH 30 ? 1_555 NI ? H NI . ? A NI 14 ? 1_555 O ? N HOH . ? A HOH 32 ? 1_555 90.9 ? 48 O ? N HOH . ? A HOH 31 ? 1_555 NI ? H NI . ? A NI 14 ? 1_555 O ? N HOH . ? A HOH 32 ? 1_555 174.0 ? 49 O ? N HOH . ? A HOH 30 ? 1_555 NI ? H NI . ? A NI 14 ? 1_555 O ? N HOH . ? A HOH 33 ? 1_555 93.8 ? 50 O ? N HOH . ? A HOH 31 ? 1_555 NI ? H NI . ? A NI 14 ? 1_555 O ? N HOH . ? A HOH 33 ? 1_555 93.8 ? 51 O ? N HOH . ? A HOH 32 ? 1_555 NI ? H NI . ? A NI 14 ? 1_555 O ? N HOH . ? A HOH 33 ? 1_555 91.0 ? 52 O ? N HOH . ? A HOH 30 ? 1_555 NI ? H NI . ? A NI 14 ? 1_555 O ? N HOH . ? A HOH 34 ? 1_555 89.8 ? 53 O ? N HOH . ? A HOH 31 ? 1_555 NI ? H NI . ? A NI 14 ? 1_555 O ? N HOH . ? A HOH 34 ? 1_555 88.1 ? 54 O ? N HOH . ? A HOH 32 ? 1_555 NI ? H NI . ? A NI 14 ? 1_555 O ? N HOH . ? A HOH 34 ? 1_555 86.9 ? 55 O ? N HOH . ? A HOH 33 ? 1_555 NI ? H NI . ? A NI 14 ? 1_555 O ? N HOH . ? A HOH 34 ? 1_555 175.9 ? 56 O ? N HOH . ? A HOH 30 ? 1_555 NI ? H NI . ? A NI 14 ? 1_555 O ? N HOH . ? A HOH 35 ? 1_555 174.3 ? 57 O ? N HOH . ? A HOH 31 ? 1_555 NI ? H NI . ? A NI 14 ? 1_555 O ? N HOH . ? A HOH 35 ? 1_555 89.5 ? 58 O ? N HOH . ? A HOH 32 ? 1_555 NI ? H NI . ? A NI 14 ? 1_555 O ? N HOH . ? A HOH 35 ? 1_555 86.7 ? 59 O ? N HOH . ? A HOH 33 ? 1_555 NI ? H NI . ? A NI 14 ? 1_555 O ? N HOH . ? A HOH 35 ? 1_555 91.5 ? 60 O ? N HOH . ? A HOH 34 ? 1_555 NI ? H NI . ? A NI 14 ? 1_555 O ? N HOH . ? A HOH 35 ? 1_555 84.9 ? 61 N7 ? B DG 10 ? B DG 20 ? 1_555 NI ? J NI . ? B NI 5 ? 1_555 O ? O HOH . ? B HOH 26 ? 1_555 97.9 ? 62 N7 ? B DG 10 ? B DG 20 ? 1_555 NI ? J NI . ? B NI 5 ? 1_555 O ? O HOH . ? B HOH 27 ? 1_555 92.8 ? 63 O ? O HOH . ? B HOH 26 ? 1_555 NI ? J NI . ? B NI 5 ? 1_555 O ? O HOH . ? B HOH 27 ? 1_555 169.3 ? 64 N7 ? B DG 10 ? B DG 20 ? 1_555 NI ? J NI . ? B NI 5 ? 1_555 O ? O HOH . ? B HOH 28 ? 1_555 91.7 ? 65 O ? O HOH . ? B HOH 26 ? 1_555 NI ? J NI . ? B NI 5 ? 1_555 O ? O HOH . ? B HOH 28 ? 1_555 88.2 ? 66 O ? O HOH . ? B HOH 27 ? 1_555 NI ? J NI . ? B NI 5 ? 1_555 O ? O HOH . ? B HOH 28 ? 1_555 90.7 ? 67 N7 ? B DG 10 ? B DG 20 ? 1_555 NI ? J NI . ? B NI 5 ? 1_555 O ? O HOH . ? B HOH 29 ? 1_555 96.5 ? 68 O ? O HOH . ? B HOH 26 ? 1_555 NI ? J NI . ? B NI 5 ? 1_555 O ? O HOH . ? B HOH 29 ? 1_555 88.5 ? 69 O ? O HOH . ? B HOH 27 ? 1_555 NI ? J NI . ? B NI 5 ? 1_555 O ? O HOH . ? B HOH 29 ? 1_555 91.1 ? 70 O ? O HOH . ? B HOH 28 ? 1_555 NI ? J NI . ? B NI 5 ? 1_555 O ? O HOH . ? B HOH 29 ? 1_555 171.5 ? 71 N7 ? B DG 10 ? B DG 20 ? 1_555 NI ? J NI . ? B NI 5 ? 1_555 O ? O HOH . ? B HOH 30 ? 1_555 176.3 ? 72 O ? O HOH . ? B HOH 26 ? 1_555 NI ? J NI . ? B NI 5 ? 1_555 O ? O HOH . ? B HOH 30 ? 1_555 84.5 ? 73 O ? O HOH . ? B HOH 27 ? 1_555 NI ? J NI . ? B NI 5 ? 1_555 O ? O HOH . ? B HOH 30 ? 1_555 84.8 ? 74 O ? O HOH . ? B HOH 28 ? 1_555 NI ? J NI . ? B NI 5 ? 1_555 O ? O HOH . ? B HOH 30 ? 1_555 85.6 ? 75 O ? O HOH . ? B HOH 29 ? 1_555 NI ? J NI . ? B NI 5 ? 1_555 O ? O HOH . ? B HOH 30 ? 1_555 86.3 ? 76 N7 ? B DG 2 ? B DG 12 ? 1_555 NI ? I NI . ? B NI 7 ? 1_555 O ? O HOH . ? B HOH 21 ? 1_555 109.7 ? 77 N7 ? B DG 2 ? B DG 12 ? 1_555 NI ? I NI . ? B NI 7 ? 1_555 O ? O HOH . ? B HOH 22 ? 1_555 78.9 ? 78 O ? O HOH . ? B HOH 21 ? 1_555 NI ? I NI . ? B NI 7 ? 1_555 O ? O HOH . ? B HOH 22 ? 1_555 171.4 ? 79 N7 ? B DG 2 ? B DG 12 ? 1_555 NI ? I NI . ? B NI 7 ? 1_555 O ? O HOH . ? B HOH 23 ? 1_555 83.5 ? 80 O ? O HOH . ? B HOH 21 ? 1_555 NI ? I NI . ? B NI 7 ? 1_555 O ? O HOH . ? B HOH 23 ? 1_555 91.2 ? 81 O ? O HOH . ? B HOH 22 ? 1_555 NI ? I NI . ? B NI 7 ? 1_555 O ? O HOH . ? B HOH 23 ? 1_555 89.7 ? 82 N7 ? B DG 2 ? B DG 12 ? 1_555 NI ? I NI . ? B NI 7 ? 1_555 O ? O HOH . ? B HOH 24 ? 1_555 103.1 ? 83 O ? O HOH . ? B HOH 21 ? 1_555 NI ? I NI . ? B NI 7 ? 1_555 O ? O HOH . ? B HOH 24 ? 1_555 90.4 ? 84 O ? O HOH . ? B HOH 22 ? 1_555 NI ? I NI . ? B NI 7 ? 1_555 O ? O HOH . ? B HOH 24 ? 1_555 87.5 ? 85 O ? O HOH . ? B HOH 23 ? 1_555 NI ? I NI . ? B NI 7 ? 1_555 O ? O HOH . ? B HOH 24 ? 1_555 172.2 ? 86 N7 ? B DG 2 ? B DG 12 ? 1_555 NI ? I NI . ? B NI 7 ? 1_555 O ? O HOH . ? B HOH 25 ? 1_555 162.9 ? 87 O ? O HOH . ? B HOH 21 ? 1_555 NI ? I NI . ? B NI 7 ? 1_555 O ? O HOH . ? B HOH 25 ? 1_555 84.5 ? 88 O ? O HOH . ? B HOH 22 ? 1_555 NI ? I NI . ? B NI 7 ? 1_555 O ? O HOH . ? B HOH 25 ? 1_555 87.0 ? 89 O ? O HOH . ? B HOH 23 ? 1_555 NI ? I NI . ? B NI 7 ? 1_555 O ? O HOH . ? B HOH 25 ? 1_555 86.7 ? 90 O ? O HOH . ? B HOH 24 ? 1_555 NI ? I NI . ? B NI 7 ? 1_555 O ? O HOH . ? B HOH 25 ? 1_555 85.8 ? 91 N7 ? C DG 2 ? C DG 22 ? 1_555 NI ? K NI . ? C NI 1 ? 1_555 O ? P HOH . ? C HOH 34 ? 1_555 93.1 ? 92 N7 ? C DG 2 ? C DG 22 ? 1_555 NI ? K NI . ? C NI 1 ? 1_555 O ? P HOH . ? C HOH 35 ? 1_555 86.8 ? 93 O ? P HOH . ? C HOH 34 ? 1_555 NI ? K NI . ? C NI 1 ? 1_555 O ? P HOH . ? C HOH 35 ? 1_555 178.0 ? 94 N7 ? C DG 2 ? C DG 22 ? 1_555 NI ? K NI . ? C NI 1 ? 1_555 O ? P HOH . ? C HOH 36 ? 1_555 82.4 ? 95 O ? P HOH . ? C HOH 34 ? 1_555 NI ? K NI . ? C NI 1 ? 1_555 O ? P HOH . ? C HOH 36 ? 1_555 93.5 ? 96 O ? P HOH . ? C HOH 35 ? 1_555 NI ? K NI . ? C NI 1 ? 1_555 O ? P HOH . ? C HOH 36 ? 1_555 88.4 ? 97 N7 ? C DG 2 ? C DG 22 ? 1_555 NI ? K NI . ? C NI 1 ? 1_555 O ? P HOH . ? C HOH 37 ? 1_555 96.0 ? 98 O ? P HOH . ? C HOH 34 ? 1_555 NI ? K NI . ? C NI 1 ? 1_555 O ? P HOH . ? C HOH 37 ? 1_555 90.5 ? 99 O ? P HOH . ? C HOH 35 ? 1_555 NI ? K NI . ? C NI 1 ? 1_555 O ? P HOH . ? C HOH 37 ? 1_555 87.5 ? 100 O ? P HOH . ? C HOH 36 ? 1_555 NI ? K NI . ? C NI 1 ? 1_555 O ? P HOH . ? C HOH 37 ? 1_555 175.7 ? 101 N7 ? C DG 2 ? C DG 22 ? 1_555 NI ? K NI . ? C NI 1 ? 1_555 O ? P HOH . ? C HOH 38 ? 1_555 172.3 ? 102 O ? P HOH . ? C HOH 34 ? 1_555 NI ? K NI . ? C NI 1 ? 1_555 O ? P HOH . ? C HOH 38 ? 1_555 91.6 ? 103 O ? P HOH . ? C HOH 35 ? 1_555 NI ? K NI . ? C NI 1 ? 1_555 O ? P HOH . ? C HOH 38 ? 1_555 88.7 ? 104 O ? P HOH . ? C HOH 36 ? 1_555 NI ? K NI . ? C NI 1 ? 1_555 O ? P HOH . ? C HOH 38 ? 1_555 91.3 ? 105 O ? P HOH . ? C HOH 37 ? 1_555 NI ? K NI . ? C NI 1 ? 1_555 O ? P HOH . ? C HOH 38 ? 1_555 89.9 ? 106 N7 ? D DG 10 ? D DG 40 ? 1_555 NI ? M NI . ? D NI 2 ? 1_555 O ? Q HOH . ? D HOH 46 ? 1_555 81.6 ? 107 N7 ? D DG 10 ? D DG 40 ? 1_555 NI ? M NI . ? D NI 2 ? 1_555 O ? Q HOH . ? D HOH 47 ? 1_555 106.0 ? 108 O ? Q HOH . ? D HOH 46 ? 1_555 NI ? M NI . ? D NI 2 ? 1_555 O ? Q HOH . ? D HOH 47 ? 1_555 172.4 ? 109 N7 ? D DG 10 ? D DG 40 ? 1_555 NI ? M NI . ? D NI 2 ? 1_555 O ? Q HOH . ? D HOH 48 ? 1_555 96.3 ? 110 O ? Q HOH . ? D HOH 46 ? 1_555 NI ? M NI . ? D NI 2 ? 1_555 O ? Q HOH . ? D HOH 48 ? 1_555 93.0 ? 111 O ? Q HOH . ? D HOH 47 ? 1_555 NI ? M NI . ? D NI 2 ? 1_555 O ? Q HOH . ? D HOH 48 ? 1_555 87.1 ? 112 N7 ? D DG 10 ? D DG 40 ? 1_555 NI ? M NI . ? D NI 2 ? 1_555 O ? Q HOH . ? D HOH 49 ? 1_555 90.9 ? 113 O ? Q HOH . ? D HOH 46 ? 1_555 NI ? M NI . ? D NI 2 ? 1_555 O ? Q HOH . ? D HOH 49 ? 1_555 92.5 ? 114 O ? Q HOH . ? D HOH 47 ? 1_555 NI ? M NI . ? D NI 2 ? 1_555 O ? Q HOH . ? D HOH 49 ? 1_555 86.6 ? 115 O ? Q HOH . ? D HOH 48 ? 1_555 NI ? M NI . ? D NI 2 ? 1_555 O ? Q HOH . ? D HOH 49 ? 1_555 171.5 ? 116 N7 ? D DG 10 ? D DG 40 ? 1_555 NI ? M NI . ? D NI 2 ? 1_555 O ? Q HOH . ? D HOH 50 ? 1_555 168.4 ? 117 O ? Q HOH . ? D HOH 46 ? 1_555 NI ? M NI . ? D NI 2 ? 1_555 O ? Q HOH . ? D HOH 50 ? 1_555 87.4 ? 118 O ? Q HOH . ? D HOH 47 ? 1_555 NI ? M NI . ? D NI 2 ? 1_555 O ? Q HOH . ? D HOH 50 ? 1_555 85.0 ? 119 O ? Q HOH . ? D HOH 48 ? 1_555 NI ? M NI . ? D NI 2 ? 1_555 O ? Q HOH . ? D HOH 50 ? 1_555 87.6 ? 120 O ? Q HOH . ? D HOH 49 ? 1_555 NI ? M NI . ? D NI 2 ? 1_555 O ? Q HOH . ? D HOH 50 ? 1_555 86.2 ? 121 N7 ? D DG 2 ? D DG 32 ? 1_555 NI ? L NI . ? D NI 9 ? 1_555 O ? Q HOH . ? D HOH 41 ? 1_555 82.4 ? 122 N7 ? D DG 2 ? D DG 32 ? 1_555 NI ? L NI . ? D NI 9 ? 1_555 O ? Q HOH . ? D HOH 42 ? 1_555 90.7 ? 123 O ? Q HOH . ? D HOH 41 ? 1_555 NI ? L NI . ? D NI 9 ? 1_555 O ? Q HOH . ? D HOH 42 ? 1_555 173.1 ? 124 N7 ? D DG 2 ? D DG 32 ? 1_555 NI ? L NI . ? D NI 9 ? 1_555 O ? Q HOH . ? D HOH 43 ? 1_555 76.1 ? 125 O ? Q HOH . ? D HOH 41 ? 1_555 NI ? L NI . ? D NI 9 ? 1_555 O ? Q HOH . ? D HOH 43 ? 1_555 93.1 ? 126 O ? Q HOH . ? D HOH 42 ? 1_555 NI ? L NI . ? D NI 9 ? 1_555 O ? Q HOH . ? D HOH 43 ? 1_555 84.8 ? 127 N7 ? D DG 2 ? D DG 32 ? 1_555 NI ? L NI . ? D NI 9 ? 1_555 O ? Q HOH . ? D HOH 44 ? 1_555 99.2 ? 128 O ? Q HOH . ? D HOH 41 ? 1_555 NI ? L NI . ? D NI 9 ? 1_555 O ? Q HOH . ? D HOH 44 ? 1_555 91.8 ? 129 O ? Q HOH . ? D HOH 42 ? 1_555 NI ? L NI . ? D NI 9 ? 1_555 O ? Q HOH . ? D HOH 44 ? 1_555 89.7 ? 130 O ? Q HOH . ? D HOH 43 ? 1_555 NI ? L NI . ? D NI 9 ? 1_555 O ? Q HOH . ? D HOH 44 ? 1_555 172.7 ? 131 N7 ? D DG 2 ? D DG 32 ? 1_555 NI ? L NI . ? D NI 9 ? 1_555 O ? Q HOH . ? D HOH 45 ? 1_555 169.2 ? 132 O ? Q HOH . ? D HOH 41 ? 1_555 NI ? L NI . ? D NI 9 ? 1_555 O ? Q HOH . ? D HOH 45 ? 1_555 96.9 ? 133 O ? Q HOH . ? D HOH 42 ? 1_555 NI ? L NI . ? D NI 9 ? 1_555 O ? Q HOH . ? D HOH 45 ? 1_555 89.8 ? 134 O ? Q HOH . ? D HOH 43 ? 1_555 NI ? L NI . ? D NI 9 ? 1_555 O ? Q HOH . ? D HOH 45 ? 1_555 93.1 ? 135 O ? Q HOH . ? D HOH 44 ? 1_555 NI ? L NI . ? D NI 9 ? 1_555 O ? Q HOH . ? D HOH 45 ? 1_555 91.7 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NI 11 ? 6 'BINDING SITE FOR RESIDUE NI A 11' AC2 Software B NI 7 ? 6 'BINDING SITE FOR RESIDUE NI B 7' AC3 Software A NI 12 ? 6 'BINDING SITE FOR RESIDUE NI A 12' AC4 Software D NI 9 ? 6 'BINDING SITE FOR RESIDUE NI D 9' AC5 Software B NI 5 ? 6 'BINDING SITE FOR RESIDUE NI B 5' AC6 Software C NI 1 ? 6 'BINDING SITE FOR RESIDUE NI C 1' AC7 Software D NI 2 ? 6 'BINDING SITE FOR RESIDUE NI D 2' AC8 Software A NI 13 ? 6 'BINDING SITE FOR RESIDUE NI A 13' AC9 Software A NI 14 ? 6 'BINDING SITE FOR RESIDUE NI A 14' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 DG A 10 ? DG A 10 . ? 1_555 ? 2 AC1 6 HOH N . ? HOH A 15 . ? 1_555 ? 3 AC1 6 HOH N . ? HOH A 16 . ? 1_555 ? 4 AC1 6 HOH N . ? HOH A 17 . ? 1_555 ? 5 AC1 6 HOH N . ? HOH A 18 . ? 1_555 ? 6 AC1 6 DG C 10 ? DG C 30 . ? 3_545 ? 7 AC2 6 DG B 2 ? DG B 12 . ? 1_555 ? 8 AC2 6 HOH O . ? HOH B 21 . ? 1_555 ? 9 AC2 6 HOH O . ? HOH B 22 . ? 1_555 ? 10 AC2 6 HOH O . ? HOH B 23 . ? 1_555 ? 11 AC2 6 HOH O . ? HOH B 24 . ? 1_555 ? 12 AC2 6 HOH O . ? HOH B 25 . ? 1_555 ? 13 AC3 6 DG A 2 ? DG A 2 . ? 1_555 ? 14 AC3 6 HOH N . ? HOH A 19 . ? 1_555 ? 15 AC3 6 HOH N . ? HOH A 20 . ? 1_555 ? 16 AC3 6 HOH N . ? HOH A 21 . ? 1_555 ? 17 AC3 6 HOH N . ? HOH A 22 . ? 1_555 ? 18 AC3 6 HOH N . ? HOH A 23 . ? 1_555 ? 19 AC4 6 DG D 2 ? DG D 32 . ? 1_555 ? 20 AC4 6 HOH Q . ? HOH D 41 . ? 1_555 ? 21 AC4 6 HOH Q . ? HOH D 42 . ? 1_555 ? 22 AC4 6 HOH Q . ? HOH D 43 . ? 1_555 ? 23 AC4 6 HOH Q . ? HOH D 44 . ? 1_555 ? 24 AC4 6 HOH Q . ? HOH D 45 . ? 1_555 ? 25 AC5 6 DG B 10 ? DG B 20 . ? 1_555 ? 26 AC5 6 HOH O . ? HOH B 26 . ? 1_555 ? 27 AC5 6 HOH O . ? HOH B 27 . ? 1_555 ? 28 AC5 6 HOH O . ? HOH B 28 . ? 1_555 ? 29 AC5 6 HOH O . ? HOH B 29 . ? 1_555 ? 30 AC5 6 HOH O . ? HOH B 30 . ? 1_555 ? 31 AC6 6 DG C 2 ? DG C 22 . ? 1_555 ? 32 AC6 6 HOH P . ? HOH C 34 . ? 1_555 ? 33 AC6 6 HOH P . ? HOH C 35 . ? 1_555 ? 34 AC6 6 HOH P . ? HOH C 36 . ? 1_555 ? 35 AC6 6 HOH P . ? HOH C 37 . ? 1_555 ? 36 AC6 6 HOH P . ? HOH C 38 . ? 1_555 ? 37 AC7 6 DG D 10 ? DG D 40 . ? 1_555 ? 38 AC7 6 HOH Q . ? HOH D 46 . ? 1_555 ? 39 AC7 6 HOH Q . ? HOH D 47 . ? 1_555 ? 40 AC7 6 HOH Q . ? HOH D 48 . ? 1_555 ? 41 AC7 6 HOH Q . ? HOH D 49 . ? 1_555 ? 42 AC7 6 HOH Q . ? HOH D 50 . ? 1_555 ? 43 AC8 6 HOH N . ? HOH A 24 . ? 1_555 ? 44 AC8 6 HOH N . ? HOH A 25 . ? 1_555 ? 45 AC8 6 HOH N . ? HOH A 26 . ? 1_555 ? 46 AC8 6 HOH N . ? HOH A 27 . ? 1_555 ? 47 AC8 6 HOH N . ? HOH A 28 . ? 1_555 ? 48 AC8 6 HOH N . ? HOH A 29 . ? 1_555 ? 49 AC9 6 HOH N . ? HOH A 30 . ? 1_555 ? 50 AC9 6 HOH N . ? HOH A 31 . ? 1_555 ? 51 AC9 6 HOH N . ? HOH A 32 . ? 1_555 ? 52 AC9 6 HOH N . ? HOH A 33 . ? 1_555 ? 53 AC9 6 HOH N . ? HOH A 34 . ? 1_555 ? 54 AC9 6 HOH N . ? HOH A 35 . ? 1_555 ? # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG A 10 ? ? 0.087 'SIDE CHAIN' 2 1 DG C 30 ? ? 0.054 'SIDE CHAIN' # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id B _pdbx_unobs_or_zero_occ_residues.auth_comp_id DC _pdbx_unobs_or_zero_occ_residues.auth_seq_id 11 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id B _pdbx_unobs_or_zero_occ_residues.label_comp_id DC _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 NI NI NI N N 147 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 446D 'double helix' 446D 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 2 1_555 A DC 9 1_555 -0.231 -0.123 -0.064 -4.613 3.548 0.249 1 B_DG12:DC9_A B 12 ? A 9 ? 19 1 1 B DT 3 1_555 A DA 8 1_555 0.038 -0.116 -0.383 13.269 -0.218 -1.910 2 B_DT13:DA8_A B 13 ? A 8 ? 20 1 1 B DA 4 1_555 A DT 7 1_555 0.001 -0.089 0.250 15.663 -10.683 1.054 3 B_DA14:DT7_A B 14 ? A 7 ? 20 1 1 B DT 5 1_555 A DA 6 1_555 -0.105 -0.123 0.163 1.052 -4.210 0.205 4 B_DT15:DA6_A B 15 ? A 6 ? 20 1 1 B DA 6 1_555 A DT 5 1_555 0.066 -0.201 0.164 -10.491 -0.876 -1.723 5 B_DA16:DT5_A B 16 ? A 5 ? 20 1 1 B DT 7 1_555 A DA 4 1_555 -0.016 -0.214 0.091 -0.178 -3.554 -0.022 6 B_DT17:DA4_A B 17 ? A 4 ? 20 1 1 B DA 8 1_555 A DT 3 1_555 -0.048 -0.227 0.362 -7.075 3.005 -1.580 7 B_DA18:DT3_A B 18 ? A 3 ? 20 1 1 B DC 9 1_555 A DG 2 1_555 0.291 -0.147 -0.406 10.479 -0.439 -0.300 8 B_DC19:DG2_A B 19 ? A 2 ? 19 1 1 D DG 2 1_555 C DC 9 1_555 -0.310 -0.109 -0.209 -7.348 12.968 1.648 9 D_DG32:DC29_C D 32 ? C 29 ? 19 1 1 D DT 3 1_555 C DA 8 1_555 0.019 -0.213 -0.733 14.178 -7.975 -4.395 10 D_DT33:DA28_C D 33 ? C 28 ? 20 1 1 D DA 4 1_555 C DT 7 1_555 -0.027 -0.164 -0.099 0.349 -11.449 1.831 11 D_DA34:DT27_C D 34 ? C 27 ? 20 1 1 D DT 5 1_555 C DA 6 1_555 -0.264 -0.091 -0.346 2.181 -11.294 -1.789 12 D_DT35:DA26_C D 35 ? C 26 ? 20 1 1 D DA 6 1_555 C DT 5 1_555 0.123 -0.095 -0.051 -13.094 -11.129 -0.840 13 D_DA36:DT25_C D 36 ? C 25 ? 20 1 1 D DT 7 1_555 C DA 4 1_555 -0.015 -0.085 -0.057 0.936 -8.654 -2.618 14 D_DT37:DA24_C D 37 ? C 24 ? 20 1 1 D DA 8 1_555 C DT 3 1_555 0.159 -0.157 0.334 -7.721 -1.569 -2.279 15 D_DA38:DT23_C D 38 ? C 23 ? 20 1 1 D DC 9 1_555 C DG 2 1_555 0.280 -0.102 -0.136 13.425 6.746 -1.310 16 D_DC39:DG22_C D 39 ? C 22 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 2 1_555 A DC 9 1_555 B DT 3 1_555 A DA 8 1_555 -0.113 -0.168 2.930 1.069 3.193 27.054 -1.068 0.479 2.885 6.792 -2.274 27.259 1 BB_DG12DT13:DA8DC9_AA B 12 ? A 9 ? B 13 ? A 8 ? 1 B DT 3 1_555 A DA 8 1_555 B DA 4 1_555 A DT 7 1_555 0.107 -0.162 3.104 -2.501 5.277 38.379 -0.853 -0.449 3.043 7.971 3.778 38.804 2 BB_DT13DA14:DT7DA8_AA B 13 ? A 8 ? B 14 ? A 7 ? 1 B DA 4 1_555 A DT 7 1_555 B DT 5 1_555 A DA 6 1_555 0.032 -0.697 3.747 0.238 -0.957 30.561 -1.103 -0.007 3.766 -1.814 -0.451 30.576 3 BB_DA14DT15:DA6DT7_AA B 14 ? A 7 ? B 15 ? A 6 ? 1 B DT 5 1_555 A DA 6 1_555 B DA 6 1_555 A DT 5 1_555 0.016 -0.557 3.565 -1.468 -0.515 42.674 -0.708 -0.183 3.569 -0.707 2.016 42.701 4 BB_DT15DA16:DT5DA6_AA B 15 ? A 6 ? B 16 ? A 5 ? 1 B DA 6 1_555 A DT 5 1_555 B DT 7 1_555 A DA 4 1_555 -0.280 -0.534 2.969 0.372 -4.884 30.142 -0.122 0.600 3.013 -9.313 -0.709 30.528 5 BB_DA16DT17:DA4DT5_AA B 16 ? A 5 ? B 17 ? A 4 ? 1 B DT 7 1_555 A DA 4 1_555 B DA 8 1_555 A DT 3 1_555 0.181 0.481 3.470 -2.292 0.445 43.379 0.604 -0.480 3.461 0.602 3.098 43.439 6 BB_DT17DA18:DT3DA4_AA B 17 ? A 4 ? B 18 ? A 3 ? 1 B DA 8 1_555 A DT 3 1_555 B DC 9 1_555 A DG 2 1_555 0.163 -0.045 2.985 8.759 -0.204 27.738 -0.048 1.448 2.900 -0.412 -17.719 29.063 7 BB_DA18DC19:DG2DT3_AA B 18 ? A 3 ? B 19 ? A 2 ? 1 B DC 9 1_555 A DG 2 1_555 D DG 2 1_555 C DC 9 1_555 -0.135 2.393 3.640 -4.672 6.419 -60.819 -2.674 -0.371 3.379 -6.312 -4.594 -61.286 8 BD_DC19DG32:DC29DG2_CA B 19 ? A 2 ? D 32 ? C 29 ? 1 D DG 2 1_555 C DC 9 1_555 D DT 3 1_555 C DA 8 1_555 -0.671 0.023 2.830 6.475 2.730 29.565 -0.418 2.380 2.619 5.257 -12.468 30.370 9 DD_DG32DT33:DA28DC29_CC D 32 ? C 29 ? D 33 ? C 28 ? 1 D DT 3 1_555 C DA 8 1_555 D DA 4 1_555 C DT 7 1_555 -0.331 0.017 3.658 -6.954 5.808 37.649 -0.780 -0.464 3.624 8.844 10.589 38.685 10 DD_DT33DA34:DT27DA28_CC D 33 ? C 28 ? D 34 ? C 27 ? 1 D DA 4 1_555 C DT 7 1_555 D DT 5 1_555 C DA 6 1_555 0.112 -0.824 3.210 2.437 2.894 30.699 -2.090 0.249 3.121 5.440 -4.582 30.925 11 DD_DA34DT35:DA26DT27_CC D 34 ? C 27 ? D 35 ? C 26 ? 1 D DT 5 1_555 C DA 6 1_555 D DA 6 1_555 C DT 5 1_555 0.123 -0.100 3.773 -4.584 -2.458 42.933 0.141 -0.684 3.741 -3.343 6.236 43.232 12 DD_DT35DA36:DT25DA26_CC D 35 ? C 26 ? D 36 ? C 25 ? 1 D DA 6 1_555 C DT 5 1_555 D DT 7 1_555 C DA 4 1_555 -0.239 -0.559 2.851 -0.627 -3.124 31.453 -0.516 0.336 2.895 -5.745 1.152 31.610 13 DD_DA36DT37:DA24DT25_CC D 36 ? C 25 ? D 37 ? C 24 ? 1 D DT 7 1_555 C DA 4 1_555 D DA 8 1_555 C DT 3 1_555 -0.005 -0.067 3.407 -2.413 3.451 39.878 -0.508 -0.279 3.384 5.043 3.525 40.091 14 DD_DT37DA38:DT23DA24_CC D 37 ? C 24 ? D 38 ? C 23 ? 1 D DA 8 1_555 C DT 3 1_555 D DC 9 1_555 C DG 2 1_555 0.150 -0.371 2.925 2.856 2.168 27.415 -1.246 0.304 2.887 4.549 -5.994 27.644 15 DD_DA38DC39:DG22DT23_CC D 38 ? C 23 ? D 39 ? C 22 ? # _atom_sites.entry_id 446D _atom_sites.fract_transf_matrix[1][1] 0.019062 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019062 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009853 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O P # loop_