data_44ZG # _entry.id 44ZG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.417 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 44ZG pdb_000044zg 10.2210/pdb44zg/pdb WWPDB D_1300078305 ? ? EMDB EMD-83109 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-10-07 ? 2 'EM metadata' 1 0 2026-10-07 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 44ZG _pdbx_database_status.recvd_initial_deposition_date 2026-08-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Sunflower protein amyloid fibrils - PM2' _pdbx_database_related.db_id EMD-83109 _pdbx_database_related.content_type 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 4 caoqin@sjtu.edu.cn Qin Cao ? 'principal investigator/group leader' 0000-0003-4207-2697 5 caoyiping@sjtu.edu.cn Yiping Cao ? 'principal investigator/group leader' 0000-0002-7039-5445 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Li, S.' 1 ? 'Cao, Q.' 2 ? 'Cao, Y.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country DE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Small _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1613-6829 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first e75987 _citation.page_last e75987 _citation.title 'Cryo-EM Structures of Sunflower Amyloid Fibrils Reveal Two Distinct Disulfide‐Linked Assembly Modes.' _citation.year 2026 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/smll.75987 _citation.pdbx_database_id_PubMed 42801496 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, S.' 1 0000-0002-3177-1364 primary 'Ouyang, K.' 2 0000-0001-9095-6230 primary 'Li, S.' 3 ? primary 'Fang, Y.' 4 0000-0003-3411-7648 primary 'Cao, Q.' 5 ? primary 'Cao, Y.' 6 0000-0002-7039-5445 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description '11-S seed storage protein, plant' _entity.formula_weight 4365.760 _entity.pdbx_number_of_molecules 5 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Putative 11-S seed storage protein,plant,RmlC-like cupin domain,RmlC-like jelly roll fold protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code NQCQLQNIEALEPIEVIQAEAGVTEIWDAYDQQFQCAGV _entity_poly.pdbx_seq_one_letter_code_can NQCQLQNIEALEPIEVIQAEAGVTEIWDAYDQQFQCAGV _entity_poly.pdbx_strand_id A,B,C,D,E _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 GLN n 1 3 CYS n 1 4 GLN n 1 5 LEU n 1 6 GLN n 1 7 ASN n 1 8 ILE n 1 9 GLU n 1 10 ALA n 1 11 LEU n 1 12 GLU n 1 13 PRO n 1 14 ILE n 1 15 GLU n 1 16 VAL n 1 17 ILE n 1 18 GLN n 1 19 ALA n 1 20 GLU n 1 21 ALA n 1 22 GLY n 1 23 VAL n 1 24 THR n 1 25 GLU n 1 26 ILE n 1 27 TRP n 1 28 ASP n 1 29 ALA n 1 30 TYR n 1 31 ASP n 1 32 GLN n 1 33 GLN n 1 34 PHE n 1 35 GLN n 1 36 CYS n 1 37 ALA n 1 38 GLY n 1 39 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 39 _entity_src_gen.gene_src_common_name 'common sunflower' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'HannXRQ_Chr10g0288971, HannXRQ_Chr10g0301281, HanXRQr2_Chr10g0447881, HanXRQr2_Chr10g0447931' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Helianthus annuus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4232 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Helianthus annuus' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4232 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 30 30 ASN ASN A . n A 1 2 GLN 2 31 31 GLN GLN A . n A 1 3 CYS 3 32 32 CYS CYS A . n A 1 4 GLN 4 33 33 GLN GLN A . n A 1 5 LEU 5 34 34 LEU LEU A . n A 1 6 GLN 6 35 35 GLN GLN A . n A 1 7 ASN 7 36 36 ASN ASN A . n A 1 8 ILE 8 37 37 ILE ILE A . n A 1 9 GLU 9 38 38 GLU GLU A . n A 1 10 ALA 10 39 39 ALA ALA A . n A 1 11 LEU 11 40 40 LEU LEU A . n A 1 12 GLU 12 41 41 GLU GLU A . n A 1 13 PRO 13 42 42 PRO PRO A . n A 1 14 ILE 14 43 43 ILE ILE A . n A 1 15 GLU 15 44 44 GLU GLU A . n A 1 16 VAL 16 45 45 VAL VAL A . n A 1 17 ILE 17 46 46 ILE ILE A . n A 1 18 GLN 18 47 47 GLN GLN A . n A 1 19 ALA 19 48 48 ALA ALA A . n A 1 20 GLU 20 49 49 GLU GLU A . n A 1 21 ALA 21 50 50 ALA ALA A . n A 1 22 GLY 22 51 51 GLY GLY A . n A 1 23 VAL 23 52 52 VAL VAL A . n A 1 24 THR 24 53 53 THR THR A . n A 1 25 GLU 25 54 54 GLU GLU A . n A 1 26 ILE 26 55 55 ILE ILE A . n A 1 27 TRP 27 56 56 TRP TRP A . n A 1 28 ASP 28 57 57 ASP ASP A . n A 1 29 ALA 29 58 58 ALA ALA A . n A 1 30 TYR 30 59 59 TYR TYR A . n A 1 31 ASP 31 60 60 ASP ASP A . n A 1 32 GLN 32 61 61 GLN GLN A . n A 1 33 GLN 33 62 62 GLN GLN A . n A 1 34 PHE 34 63 63 PHE PHE A . n A 1 35 GLN 35 64 64 GLN GLN A . n A 1 36 CYS 36 65 65 CYS CYS A . n A 1 37 ALA 37 66 66 ALA ALA A . n A 1 38 GLY 38 67 67 GLY GLY A . n A 1 39 VAL 39 68 68 VAL VAL A . n B 1 1 ASN 1 30 30 ASN ASN B . n B 1 2 GLN 2 31 31 GLN GLN B . n B 1 3 CYS 3 32 32 CYS CYS B . n B 1 4 GLN 4 33 33 GLN GLN B . n B 1 5 LEU 5 34 34 LEU LEU B . n B 1 6 GLN 6 35 35 GLN GLN B . n B 1 7 ASN 7 36 36 ASN ASN B . n B 1 8 ILE 8 37 37 ILE ILE B . n B 1 9 GLU 9 38 38 GLU GLU B . n B 1 10 ALA 10 39 39 ALA ALA B . n B 1 11 LEU 11 40 40 LEU LEU B . n B 1 12 GLU 12 41 41 GLU GLU B . n B 1 13 PRO 13 42 42 PRO PRO B . n B 1 14 ILE 14 43 43 ILE ILE B . n B 1 15 GLU 15 44 44 GLU GLU B . n B 1 16 VAL 16 45 45 VAL VAL B . n B 1 17 ILE 17 46 46 ILE ILE B . n B 1 18 GLN 18 47 47 GLN GLN B . n B 1 19 ALA 19 48 48 ALA ALA B . n B 1 20 GLU 20 49 49 GLU GLU B . n B 1 21 ALA 21 50 50 ALA ALA B . n B 1 22 GLY 22 51 51 GLY GLY B . n B 1 23 VAL 23 52 52 VAL VAL B . n B 1 24 THR 24 53 53 THR THR B . n B 1 25 GLU 25 54 54 GLU GLU B . n B 1 26 ILE 26 55 55 ILE ILE B . n B 1 27 TRP 27 56 56 TRP TRP B . n B 1 28 ASP 28 57 57 ASP ASP B . n B 1 29 ALA 29 58 58 ALA ALA B . n B 1 30 TYR 30 59 59 TYR TYR B . n B 1 31 ASP 31 60 60 ASP ASP B . n B 1 32 GLN 32 61 61 GLN GLN B . n B 1 33 GLN 33 62 62 GLN GLN B . n B 1 34 PHE 34 63 63 PHE PHE B . n B 1 35 GLN 35 64 64 GLN GLN B . n B 1 36 CYS 36 65 65 CYS CYS B . n B 1 37 ALA 37 66 66 ALA ALA B . n B 1 38 GLY 38 67 67 GLY GLY B . n B 1 39 VAL 39 68 68 VAL VAL B . n C 1 1 ASN 1 30 30 ASN ASN C . n C 1 2 GLN 2 31 31 GLN GLN C . n C 1 3 CYS 3 32 32 CYS CYS C . n C 1 4 GLN 4 33 33 GLN GLN C . n C 1 5 LEU 5 34 34 LEU LEU C . n C 1 6 GLN 6 35 35 GLN GLN C . n C 1 7 ASN 7 36 36 ASN ASN C . n C 1 8 ILE 8 37 37 ILE ILE C . n C 1 9 GLU 9 38 38 GLU GLU C . n C 1 10 ALA 10 39 39 ALA ALA C . n C 1 11 LEU 11 40 40 LEU LEU C . n C 1 12 GLU 12 41 41 GLU GLU C . n C 1 13 PRO 13 42 42 PRO PRO C . n C 1 14 ILE 14 43 43 ILE ILE C . n C 1 15 GLU 15 44 44 GLU GLU C . n C 1 16 VAL 16 45 45 VAL VAL C . n C 1 17 ILE 17 46 46 ILE ILE C . n C 1 18 GLN 18 47 47 GLN GLN C . n C 1 19 ALA 19 48 48 ALA ALA C . n C 1 20 GLU 20 49 49 GLU GLU C . n C 1 21 ALA 21 50 50 ALA ALA C . n C 1 22 GLY 22 51 51 GLY GLY C . n C 1 23 VAL 23 52 52 VAL VAL C . n C 1 24 THR 24 53 53 THR THR C . n C 1 25 GLU 25 54 54 GLU GLU C . n C 1 26 ILE 26 55 55 ILE ILE C . n C 1 27 TRP 27 56 56 TRP TRP C . n C 1 28 ASP 28 57 57 ASP ASP C . n C 1 29 ALA 29 58 58 ALA ALA C . n C 1 30 TYR 30 59 59 TYR TYR C . n C 1 31 ASP 31 60 60 ASP ASP C . n C 1 32 GLN 32 61 61 GLN GLN C . n C 1 33 GLN 33 62 62 GLN GLN C . n C 1 34 PHE 34 63 63 PHE PHE C . n C 1 35 GLN 35 64 64 GLN GLN C . n C 1 36 CYS 36 65 65 CYS CYS C . n C 1 37 ALA 37 66 66 ALA ALA C . n C 1 38 GLY 38 67 67 GLY GLY C . n C 1 39 VAL 39 68 68 VAL VAL C . n D 1 1 ASN 1 30 30 ASN ASN D . n D 1 2 GLN 2 31 31 GLN GLN D . n D 1 3 CYS 3 32 32 CYS CYS D . n D 1 4 GLN 4 33 33 GLN GLN D . n D 1 5 LEU 5 34 34 LEU LEU D . n D 1 6 GLN 6 35 35 GLN GLN D . n D 1 7 ASN 7 36 36 ASN ASN D . n D 1 8 ILE 8 37 37 ILE ILE D . n D 1 9 GLU 9 38 38 GLU GLU D . n D 1 10 ALA 10 39 39 ALA ALA D . n D 1 11 LEU 11 40 40 LEU LEU D . n D 1 12 GLU 12 41 41 GLU GLU D . n D 1 13 PRO 13 42 42 PRO PRO D . n D 1 14 ILE 14 43 43 ILE ILE D . n D 1 15 GLU 15 44 44 GLU GLU D . n D 1 16 VAL 16 45 45 VAL VAL D . n D 1 17 ILE 17 46 46 ILE ILE D . n D 1 18 GLN 18 47 47 GLN GLN D . n D 1 19 ALA 19 48 48 ALA ALA D . n D 1 20 GLU 20 49 49 GLU GLU D . n D 1 21 ALA 21 50 50 ALA ALA D . n D 1 22 GLY 22 51 51 GLY GLY D . n D 1 23 VAL 23 52 52 VAL VAL D . n D 1 24 THR 24 53 53 THR THR D . n D 1 25 GLU 25 54 54 GLU GLU D . n D 1 26 ILE 26 55 55 ILE ILE D . n D 1 27 TRP 27 56 56 TRP TRP D . n D 1 28 ASP 28 57 57 ASP ASP D . n D 1 29 ALA 29 58 58 ALA ALA D . n D 1 30 TYR 30 59 59 TYR TYR D . n D 1 31 ASP 31 60 60 ASP ASP D . n D 1 32 GLN 32 61 61 GLN GLN D . n D 1 33 GLN 33 62 62 GLN GLN D . n D 1 34 PHE 34 63 63 PHE PHE D . n D 1 35 GLN 35 64 64 GLN GLN D . n D 1 36 CYS 36 65 65 CYS CYS D . n D 1 37 ALA 37 66 66 ALA ALA D . n D 1 38 GLY 38 67 67 GLY GLY D . n D 1 39 VAL 39 68 68 VAL VAL D . n E 1 1 ASN 1 30 30 ASN ASN E . n E 1 2 GLN 2 31 31 GLN GLN E . n E 1 3 CYS 3 32 32 CYS CYS E . n E 1 4 GLN 4 33 33 GLN GLN E . n E 1 5 LEU 5 34 34 LEU LEU E . n E 1 6 GLN 6 35 35 GLN GLN E . n E 1 7 ASN 7 36 36 ASN ASN E . n E 1 8 ILE 8 37 37 ILE ILE E . n E 1 9 GLU 9 38 38 GLU GLU E . n E 1 10 ALA 10 39 39 ALA ALA E . n E 1 11 LEU 11 40 40 LEU LEU E . n E 1 12 GLU 12 41 41 GLU GLU E . n E 1 13 PRO 13 42 42 PRO PRO E . n E 1 14 ILE 14 43 43 ILE ILE E . n E 1 15 GLU 15 44 44 GLU GLU E . n E 1 16 VAL 16 45 45 VAL VAL E . n E 1 17 ILE 17 46 46 ILE ILE E . n E 1 18 GLN 18 47 47 GLN GLN E . n E 1 19 ALA 19 48 48 ALA ALA E . n E 1 20 GLU 20 49 49 GLU GLU E . n E 1 21 ALA 21 50 50 ALA ALA E . n E 1 22 GLY 22 51 51 GLY GLY E . n E 1 23 VAL 23 52 52 VAL VAL E . n E 1 24 THR 24 53 53 THR THR E . n E 1 25 GLU 25 54 54 GLU GLU E . n E 1 26 ILE 26 55 55 ILE ILE E . n E 1 27 TRP 27 56 56 TRP TRP E . n E 1 28 ASP 28 57 57 ASP ASP E . n E 1 29 ALA 29 58 58 ALA ALA E . n E 1 30 TYR 30 59 59 TYR TYR E . n E 1 31 ASP 31 60 60 ASP ASP E . n E 1 32 GLN 32 61 61 GLN GLN E . n E 1 33 GLN 33 62 62 GLN GLN E . n E 1 34 PHE 34 63 63 PHE PHE E . n E 1 35 GLN 35 64 64 GLN GLN E . n E 1 36 CYS 36 65 65 CYS CYS E . n E 1 37 ALA 37 66 66 ALA ALA E . n E 1 38 GLY 38 67 67 GLY GLY E . n E 1 39 VAL 39 68 68 VAL VAL E . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 44ZG _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 44ZG _struct.title 'Sunflower protein amyloid fibrils - PM2' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 44ZG _struct_keywords.text 'protein fibrils, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A251TKL9_HELAN _struct_ref.pdbx_db_accession A0A251TKL9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code NQCQLQNIEALEPIEVIQAEAGVTEIWDAYDQQFQCAGV _struct_ref.pdbx_align_begin 30 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 44ZG A 1 ? 39 ? A0A251TKL9 30 ? 68 ? 30 68 2 1 44ZG B 1 ? 39 ? A0A251TKL9 30 ? 68 ? 30 68 3 1 44ZG C 1 ? 39 ? A0A251TKL9 30 ? 68 ? 30 68 4 1 44ZG D 1 ? 39 ? A0A251TKL9 30 ? 68 ? 30 68 5 1 44ZG E 1 ? 39 ? A0A251TKL9 30 ? 68 ? 30 68 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 36 SG ? ? A CYS 32 A CYS 65 1_555 ? ? ? ? ? ? ? 2.025 ? ? disulf2 disulf ? ? B CYS 3 SG ? ? ? 1_555 B CYS 36 SG ? ? B CYS 32 B CYS 65 1_555 ? ? ? ? ? ? ? 2.024 ? ? disulf3 disulf ? ? C CYS 3 SG ? ? ? 1_555 C CYS 36 SG ? ? C CYS 32 C CYS 65 1_555 ? ? ? ? ? ? ? 2.025 ? ? disulf4 disulf ? ? D CYS 3 SG ? ? ? 1_555 D CYS 36 SG ? ? D CYS 32 D CYS 65 1_555 ? ? ? ? ? ? ? 2.024 ? ? disulf5 disulf ? ? E CYS 3 SG ? ? ? 1_555 E CYS 36 SG ? ? E CYS 32 E CYS 65 1_555 ? ? ? ? ? ? ? 2.024 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 3 ? CYS A 36 ? CYS A 32 ? 1_555 CYS A 65 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS B 3 ? CYS B 36 ? CYS B 32 ? 1_555 CYS B 65 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS C 3 ? CYS C 36 ? CYS C 32 ? 1_555 CYS C 65 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS D 3 ? CYS D 36 ? CYS D 32 ? 1_555 CYS D 65 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS E 3 ? CYS E 36 ? CYS E 32 ? 1_555 CYS E 65 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? AA3 ? 5 ? AA4 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA3 1 2 ? parallel AA3 2 3 ? parallel AA3 3 4 ? parallel AA3 4 5 ? parallel AA4 1 2 ? parallel AA4 2 3 ? parallel AA4 3 4 ? parallel AA4 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 6 ? LEU A 11 ? GLN A 35 LEU A 40 AA1 2 GLN B 6 ? LEU B 11 ? GLN B 35 LEU B 40 AA1 3 GLN C 6 ? LEU C 11 ? GLN C 35 LEU C 40 AA1 4 GLN D 6 ? LEU D 11 ? GLN D 35 LEU D 40 AA1 5 GLN E 6 ? LEU E 11 ? GLN E 35 LEU E 40 AA2 1 ILE A 14 ? ALA A 19 ? ILE A 43 ALA A 48 AA2 2 ILE B 14 ? ALA B 19 ? ILE B 43 ALA B 48 AA2 3 ILE C 14 ? ALA C 19 ? ILE C 43 ALA C 48 AA2 4 ILE D 14 ? ALA D 19 ? ILE D 43 ALA D 48 AA2 5 ILE E 14 ? ALA E 19 ? ILE E 43 ALA E 48 AA3 1 VAL A 23 ? TRP A 27 ? VAL A 52 TRP A 56 AA3 2 VAL B 23 ? TRP B 27 ? VAL B 52 TRP B 56 AA3 3 VAL C 23 ? TRP C 27 ? VAL C 52 TRP C 56 AA3 4 VAL D 23 ? TRP D 27 ? VAL D 52 TRP D 56 AA3 5 VAL E 23 ? TRP E 27 ? VAL E 52 TRP E 56 AA4 1 GLN A 33 ? PHE A 34 ? GLN A 62 PHE A 63 AA4 2 GLN B 33 ? PHE B 34 ? GLN B 62 PHE B 63 AA4 3 GLN C 33 ? PHE C 34 ? GLN C 62 PHE C 63 AA4 4 GLN D 33 ? PHE D 34 ? GLN D 62 PHE D 63 AA4 5 GLN E 33 ? PHE E 34 ? GLN E 62 PHE E 63 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASN A 7 ? N ASN A 36 O ILE B 8 ? O ILE B 37 AA1 2 3 N ASN B 7 ? N ASN B 36 O ILE C 8 ? O ILE C 37 AA1 3 4 N ASN C 7 ? N ASN C 36 O ILE D 8 ? O ILE D 37 AA1 4 5 N ASN D 7 ? N ASN D 36 O ILE E 8 ? O ILE E 37 AA2 1 2 N ILE A 17 ? N ILE A 46 O GLN B 18 ? O GLN B 47 AA2 2 3 N ILE B 17 ? N ILE B 46 O GLN C 18 ? O GLN C 47 AA2 3 4 N ILE C 17 ? N ILE C 46 O GLN D 18 ? O GLN D 47 AA2 4 5 N ILE D 17 ? N ILE D 46 O GLN E 18 ? O GLN E 47 AA3 1 2 N GLU A 25 ? N GLU A 54 O ILE B 26 ? O ILE B 55 AA3 2 3 N GLU B 25 ? N GLU B 54 O ILE C 26 ? O ILE C 55 AA3 3 4 N GLU C 25 ? N GLU C 54 O ILE D 26 ? O ILE D 55 AA3 4 5 N GLU D 25 ? N GLU D 54 O ILE E 26 ? O ILE E 55 AA4 1 2 N GLN A 33 ? N GLN A 62 O PHE B 34 ? O PHE B 63 AA4 2 3 N GLN B 33 ? N GLN B 62 O PHE C 34 ? O PHE C 63 AA4 3 4 N GLN C 33 ? N GLN C 62 O PHE D 34 ? O PHE D 63 AA4 4 5 N GLN D 33 ? N GLN D 62 O PHE E 34 ? O PHE E 63 # _pdbx_entry_details.entry_id 44ZG _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 50 ? ? -147.70 15.22 2 1 CYS A 65 ? ? -32.81 127.39 3 1 ALA A 66 ? ? -145.59 -151.12 4 1 ALA B 50 ? ? -147.73 15.28 5 1 CYS B 65 ? ? -32.74 127.35 6 1 ALA B 66 ? ? -145.66 -151.11 7 1 ALA C 50 ? ? -147.73 15.25 8 1 CYS C 65 ? ? -32.69 127.27 9 1 ALA C 66 ? ? -145.54 -151.12 10 1 ALA D 50 ? ? -147.74 15.28 11 1 CYS D 65 ? ? -32.75 127.39 12 1 ALA D 66 ? ? -145.65 -151.19 13 1 ALA E 50 ? ? -147.69 15.26 14 1 CYS E 65 ? ? -32.76 127.38 15 1 ALA E 66 ? ? -145.62 -151.12 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 44ZG _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 44ZG _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.2 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 46925 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type HELICAL # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 2.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Sunflower protein amyloid fibrils PM2' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 44ZG _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1500 _em_imaging.nominal_defocus_max 2500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_vitrification.entry_id 44ZG _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 44ZG _em_experiment.id 1 _em_experiment.reconstruction_method HELICAL _em_experiment.aggregation_state FILAMENT _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASN N N N N 14 ASN CA C N S 15 ASN C C N N 16 ASN O O N N 17 ASN CB C N N 18 ASN CG C N N 19 ASN OD1 O N N 20 ASN ND2 N N N 21 ASN OXT O N N 22 ASN H H N N 23 ASN H2 H N N 24 ASN HA H N N 25 ASN HB2 H N N 26 ASN HB3 H N N 27 ASN HD21 H N N 28 ASN HD22 H N N 29 ASN HXT H N N 30 ASP N N N N 31 ASP CA C N S 32 ASP C C N N 33 ASP O O N N 34 ASP CB C N N 35 ASP CG C N N 36 ASP OD1 O N N 37 ASP OD2 O N N 38 ASP OXT O N N 39 ASP H H N N 40 ASP H2 H N N 41 ASP HA H N N 42 ASP HB2 H N N 43 ASP HB3 H N N 44 ASP HD2 H N N 45 ASP HXT H N N 46 CYS N N N N 47 CYS CA C N R 48 CYS C C N N 49 CYS O O N N 50 CYS CB C N N 51 CYS SG S N N 52 CYS OXT O N N 53 CYS H H N N 54 CYS H2 H N N 55 CYS HA H N N 56 CYS HB2 H N N 57 CYS HB3 H N N 58 CYS HG H N N 59 CYS HXT H N N 60 GLN N N N N 61 GLN CA C N S 62 GLN C C N N 63 GLN O O N N 64 GLN CB C N N 65 GLN CG C N N 66 GLN CD C N N 67 GLN OE1 O N N 68 GLN NE2 N N N 69 GLN OXT O N N 70 GLN H H N N 71 GLN H2 H N N 72 GLN HA H N N 73 GLN HB2 H N N 74 GLN HB3 H N N 75 GLN HG2 H N N 76 GLN HG3 H N N 77 GLN HE21 H N N 78 GLN HE22 H N N 79 GLN HXT H N N 80 GLU N N N N 81 GLU CA C N S 82 GLU C C N N 83 GLU O O N N 84 GLU CB C N N 85 GLU CG C N N 86 GLU CD C N N 87 GLU OE1 O N N 88 GLU OE2 O N N 89 GLU OXT O N N 90 GLU H H N N 91 GLU H2 H N N 92 GLU HA H N N 93 GLU HB2 H N N 94 GLU HB3 H N N 95 GLU HG2 H N N 96 GLU HG3 H N N 97 GLU HE2 H N N 98 GLU HXT H N N 99 GLY N N N N 100 GLY CA C N N 101 GLY C C N N 102 GLY O O N N 103 GLY OXT O N N 104 GLY H H N N 105 GLY H2 H N N 106 GLY HA2 H N N 107 GLY HA3 H N N 108 GLY HXT H N N 109 ILE N N N N 110 ILE CA C N S 111 ILE C C N N 112 ILE O O N N 113 ILE CB C N S 114 ILE CG1 C N N 115 ILE CG2 C N N 116 ILE CD1 C N N 117 ILE OXT O N N 118 ILE H H N N 119 ILE H2 H N N 120 ILE HA H N N 121 ILE HB H N N 122 ILE HG12 H N N 123 ILE HG13 H N N 124 ILE HG21 H N N 125 ILE HG22 H N N 126 ILE HG23 H N N 127 ILE HD11 H N N 128 ILE HD12 H N N 129 ILE HD13 H N N 130 ILE HXT H N N 131 LEU N N N N 132 LEU CA C N S 133 LEU C C N N 134 LEU O O N N 135 LEU CB C N N 136 LEU CG C N N 137 LEU CD1 C N N 138 LEU CD2 C N N 139 LEU OXT O N N 140 LEU H H N N 141 LEU H2 H N N 142 LEU HA H N N 143 LEU HB2 H N N 144 LEU HB3 H N N 145 LEU HG H N N 146 LEU HD11 H N N 147 LEU HD12 H N N 148 LEU HD13 H N N 149 LEU HD21 H N N 150 LEU HD22 H N N 151 LEU HD23 H N N 152 LEU HXT H N N 153 PHE N N N N 154 PHE CA C N S 155 PHE C C N N 156 PHE O O N N 157 PHE CB C N N 158 PHE CG C Y N 159 PHE CD1 C Y N 160 PHE CD2 C Y N 161 PHE CE1 C Y N 162 PHE CE2 C Y N 163 PHE CZ C Y N 164 PHE OXT O N N 165 PHE H H N N 166 PHE H2 H N N 167 PHE HA H N N 168 PHE HB2 H N N 169 PHE HB3 H N N 170 PHE HD1 H N N 171 PHE HD2 H N N 172 PHE HE1 H N N 173 PHE HE2 H N N 174 PHE HZ H N N 175 PHE HXT H N N 176 PRO N N N N 177 PRO CA C N S 178 PRO C C N N 179 PRO O O N N 180 PRO CB C N N 181 PRO CG C N N 182 PRO CD C N N 183 PRO OXT O N N 184 PRO H H N N 185 PRO HA H N N 186 PRO HB2 H N N 187 PRO HB3 H N N 188 PRO HG2 H N N 189 PRO HG3 H N N 190 PRO HD2 H N N 191 PRO HD3 H N N 192 PRO HXT H N N 193 THR N N N N 194 THR CA C N S 195 THR C C N N 196 THR O O N N 197 THR CB C N R 198 THR OG1 O N N 199 THR CG2 C N N 200 THR OXT O N N 201 THR H H N N 202 THR H2 H N N 203 THR HA H N N 204 THR HB H N N 205 THR HG1 H N N 206 THR HG21 H N N 207 THR HG22 H N N 208 THR HG23 H N N 209 THR HXT H N N 210 TRP N N N N 211 TRP CA C N S 212 TRP C C N N 213 TRP O O N N 214 TRP CB C N N 215 TRP CG C Y N 216 TRP CD1 C Y N 217 TRP CD2 C Y N 218 TRP NE1 N Y N 219 TRP CE2 C Y N 220 TRP CE3 C Y N 221 TRP CZ2 C Y N 222 TRP CZ3 C Y N 223 TRP CH2 C Y N 224 TRP OXT O N N 225 TRP H H N N 226 TRP H2 H N N 227 TRP HA H N N 228 TRP HB2 H N N 229 TRP HB3 H N N 230 TRP HD1 H N N 231 TRP HE1 H N N 232 TRP HE3 H N N 233 TRP HZ2 H N N 234 TRP HZ3 H N N 235 TRP HH2 H N N 236 TRP HXT H N N 237 TYR N N N N 238 TYR CA C N S 239 TYR C C N N 240 TYR O O N N 241 TYR CB C N N 242 TYR CG C Y N 243 TYR CD1 C Y N 244 TYR CD2 C Y N 245 TYR CE1 C Y N 246 TYR CE2 C Y N 247 TYR CZ C Y N 248 TYR OH O N N 249 TYR OXT O N N 250 TYR H H N N 251 TYR H2 H N N 252 TYR HA H N N 253 TYR HB2 H N N 254 TYR HB3 H N N 255 TYR HD1 H N N 256 TYR HD2 H N N 257 TYR HE1 H N N 258 TYR HE2 H N N 259 TYR HH H N N 260 TYR HXT H N N 261 VAL N N N N 262 VAL CA C N S 263 VAL C C N N 264 VAL O O N N 265 VAL CB C N N 266 VAL CG1 C N N 267 VAL CG2 C N N 268 VAL OXT O N N 269 VAL H H N N 270 VAL H2 H N N 271 VAL HA H N N 272 VAL HB H N N 273 VAL HG11 H N N 274 VAL HG12 H N N 275 VAL HG13 H N N 276 VAL HG21 H N N 277 VAL HG22 H N N 278 VAL HG23 H N N 279 VAL HXT H N N 280 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASN N CA sing N N 13 ASN N H sing N N 14 ASN N H2 sing N N 15 ASN CA C sing N N 16 ASN CA CB sing N N 17 ASN CA HA sing N N 18 ASN C O doub N N 19 ASN C OXT sing N N 20 ASN CB CG sing N N 21 ASN CB HB2 sing N N 22 ASN CB HB3 sing N N 23 ASN CG OD1 doub N N 24 ASN CG ND2 sing N N 25 ASN ND2 HD21 sing N N 26 ASN ND2 HD22 sing N N 27 ASN OXT HXT sing N N 28 ASP N CA sing N N 29 ASP N H sing N N 30 ASP N H2 sing N N 31 ASP CA C sing N N 32 ASP CA CB sing N N 33 ASP CA HA sing N N 34 ASP C O doub N N 35 ASP C OXT sing N N 36 ASP CB CG sing N N 37 ASP CB HB2 sing N N 38 ASP CB HB3 sing N N 39 ASP CG OD1 doub N N 40 ASP CG OD2 sing N N 41 ASP OD2 HD2 sing N N 42 ASP OXT HXT sing N N 43 CYS N CA sing N N 44 CYS N H sing N N 45 CYS N H2 sing N N 46 CYS CA C sing N N 47 CYS CA CB sing N N 48 CYS CA HA sing N N 49 CYS C O doub N N 50 CYS C OXT sing N N 51 CYS CB SG sing N N 52 CYS CB HB2 sing N N 53 CYS CB HB3 sing N N 54 CYS SG HG sing N N 55 CYS OXT HXT sing N N 56 GLN N CA sing N N 57 GLN N H sing N N 58 GLN N H2 sing N N 59 GLN CA C sing N N 60 GLN CA CB sing N N 61 GLN CA HA sing N N 62 GLN C O doub N N 63 GLN C OXT sing N N 64 GLN CB CG sing N N 65 GLN CB HB2 sing N N 66 GLN CB HB3 sing N N 67 GLN CG CD sing N N 68 GLN CG HG2 sing N N 69 GLN CG HG3 sing N N 70 GLN CD OE1 doub N N 71 GLN CD NE2 sing N N 72 GLN NE2 HE21 sing N N 73 GLN NE2 HE22 sing N N 74 GLN OXT HXT sing N N 75 GLU N CA sing N N 76 GLU N H sing N N 77 GLU N H2 sing N N 78 GLU CA C sing N N 79 GLU CA CB sing N N 80 GLU CA HA sing N N 81 GLU C O doub N N 82 GLU C OXT sing N N 83 GLU CB CG sing N N 84 GLU CB HB2 sing N N 85 GLU CB HB3 sing N N 86 GLU CG CD sing N N 87 GLU CG HG2 sing N N 88 GLU CG HG3 sing N N 89 GLU CD OE1 doub N N 90 GLU CD OE2 sing N N 91 GLU OE2 HE2 sing N N 92 GLU OXT HXT sing N N 93 GLY N CA sing N N 94 GLY N H sing N N 95 GLY N H2 sing N N 96 GLY CA C sing N N 97 GLY CA HA2 sing N N 98 GLY CA HA3 sing N N 99 GLY C O doub N N 100 GLY C OXT sing N N 101 GLY OXT HXT sing N N 102 ILE N CA sing N N 103 ILE N H sing N N 104 ILE N H2 sing N N 105 ILE CA C sing N N 106 ILE CA CB sing N N 107 ILE CA HA sing N N 108 ILE C O doub N N 109 ILE C OXT sing N N 110 ILE CB CG1 sing N N 111 ILE CB CG2 sing N N 112 ILE CB HB sing N N 113 ILE CG1 CD1 sing N N 114 ILE CG1 HG12 sing N N 115 ILE CG1 HG13 sing N N 116 ILE CG2 HG21 sing N N 117 ILE CG2 HG22 sing N N 118 ILE CG2 HG23 sing N N 119 ILE CD1 HD11 sing N N 120 ILE CD1 HD12 sing N N 121 ILE CD1 HD13 sing N N 122 ILE OXT HXT sing N N 123 LEU N CA sing N N 124 LEU N H sing N N 125 LEU N H2 sing N N 126 LEU CA C sing N N 127 LEU CA CB sing N N 128 LEU CA HA sing N N 129 LEU C O doub N N 130 LEU C OXT sing N N 131 LEU CB CG sing N N 132 LEU CB HB2 sing N N 133 LEU CB HB3 sing N N 134 LEU CG CD1 sing N N 135 LEU CG CD2 sing N N 136 LEU CG HG sing N N 137 LEU CD1 HD11 sing N N 138 LEU CD1 HD12 sing N N 139 LEU CD1 HD13 sing N N 140 LEU CD2 HD21 sing N N 141 LEU CD2 HD22 sing N N 142 LEU CD2 HD23 sing N N 143 LEU OXT HXT sing N N 144 PHE N CA sing N N 145 PHE N H sing N N 146 PHE N H2 sing N N 147 PHE CA C sing N N 148 PHE CA CB sing N N 149 PHE CA HA sing N N 150 PHE C O doub N N 151 PHE C OXT sing N N 152 PHE CB CG sing N N 153 PHE CB HB2 sing N N 154 PHE CB HB3 sing N N 155 PHE CG CD1 doub Y N 156 PHE CG CD2 sing Y N 157 PHE CD1 CE1 sing Y N 158 PHE CD1 HD1 sing N N 159 PHE CD2 CE2 doub Y N 160 PHE CD2 HD2 sing N N 161 PHE CE1 CZ doub Y N 162 PHE CE1 HE1 sing N N 163 PHE CE2 CZ sing Y N 164 PHE CE2 HE2 sing N N 165 PHE CZ HZ sing N N 166 PHE OXT HXT sing N N 167 PRO N CA sing N N 168 PRO N CD sing N N 169 PRO N H sing N N 170 PRO CA C sing N N 171 PRO CA CB sing N N 172 PRO CA HA sing N N 173 PRO C O doub N N 174 PRO C OXT sing N N 175 PRO CB CG sing N N 176 PRO CB HB2 sing N N 177 PRO CB HB3 sing N N 178 PRO CG CD sing N N 179 PRO CG HG2 sing N N 180 PRO CG HG3 sing N N 181 PRO CD HD2 sing N N 182 PRO CD HD3 sing N N 183 PRO OXT HXT sing N N 184 THR N CA sing N N 185 THR N H sing N N 186 THR N H2 sing N N 187 THR CA C sing N N 188 THR CA CB sing N N 189 THR CA HA sing N N 190 THR C O doub N N 191 THR C OXT sing N N 192 THR CB OG1 sing N N 193 THR CB CG2 sing N N 194 THR CB HB sing N N 195 THR OG1 HG1 sing N N 196 THR CG2 HG21 sing N N 197 THR CG2 HG22 sing N N 198 THR CG2 HG23 sing N N 199 THR OXT HXT sing N N 200 TRP N CA sing N N 201 TRP N H sing N N 202 TRP N H2 sing N N 203 TRP CA C sing N N 204 TRP CA CB sing N N 205 TRP CA HA sing N N 206 TRP C O doub N N 207 TRP C OXT sing N N 208 TRP CB CG sing N N 209 TRP CB HB2 sing N N 210 TRP CB HB3 sing N N 211 TRP CG CD1 doub Y N 212 TRP CG CD2 sing Y N 213 TRP CD1 NE1 sing Y N 214 TRP CD1 HD1 sing N N 215 TRP CD2 CE2 doub Y N 216 TRP CD2 CE3 sing Y N 217 TRP NE1 CE2 sing Y N 218 TRP NE1 HE1 sing N N 219 TRP CE2 CZ2 sing Y N 220 TRP CE3 CZ3 doub Y N 221 TRP CE3 HE3 sing N N 222 TRP CZ2 CH2 doub Y N 223 TRP CZ2 HZ2 sing N N 224 TRP CZ3 CH2 sing Y N 225 TRP CZ3 HZ3 sing N N 226 TRP CH2 HH2 sing N N 227 TRP OXT HXT sing N N 228 TYR N CA sing N N 229 TYR N H sing N N 230 TYR N H2 sing N N 231 TYR CA C sing N N 232 TYR CA CB sing N N 233 TYR CA HA sing N N 234 TYR C O doub N N 235 TYR C OXT sing N N 236 TYR CB CG sing N N 237 TYR CB HB2 sing N N 238 TYR CB HB3 sing N N 239 TYR CG CD1 doub Y N 240 TYR CG CD2 sing Y N 241 TYR CD1 CE1 sing Y N 242 TYR CD1 HD1 sing N N 243 TYR CD2 CE2 doub Y N 244 TYR CD2 HD2 sing N N 245 TYR CE1 CZ doub Y N 246 TYR CE1 HE1 sing N N 247 TYR CE2 CZ sing Y N 248 TYR CE2 HE2 sing N N 249 TYR CZ OH sing N N 250 TYR OH HH sing N N 251 TYR OXT HXT sing N N 252 VAL N CA sing N N 253 VAL N H sing N N 254 VAL N H2 sing N N 255 VAL CA C sing N N 256 VAL CA CB sing N N 257 VAL CA HA sing N N 258 VAL C O doub N N 259 VAL C OXT sing N N 260 VAL CB CG1 sing N N 261 VAL CB CG2 sing N N 262 VAL CB HB sing N N 263 VAL CG1 HG11 sing N N 264 VAL CG1 HG12 sing N N 265 VAL CG1 HG13 sing N N 266 VAL CG2 HG21 sing N N 267 VAL CG2 HG22 sing N N 268 VAL CG2 HG23 sing N N 269 VAL OXT HXT sing N N 270 # _em_admin.current_status REL _em_admin.deposition_date 2026-08-19 _em_admin.deposition_site PDBJ _em_admin.entry_id 44ZG _em_admin.last_update 2026-10-07 _em_admin.map_release_date 2026-10-07 _em_admin.title 'Sunflower protein amyloid fibrils - PM2' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 4232 _em_entity_assembly_naturalsource.organism 'Helianthus annuus' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.details ? _em_helical_entity.axial_symmetry C1 _em_helical_entity.angular_rotation_per_subunit 0.792946 _em_helical_entity.axial_rise_per_subunit 4.78639 # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 40 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? RELION 4.0 ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? ? OTHER ? 9 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? RELION 4.0 ? # _em_specimen.concentration 20 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 32572505 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 44ZG _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #