data_454D # _entry.id 454D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 454D pdb_0000454d 10.2210/pdb454d/pdb NDB UD0005 ? ? RCSB RCSB009572 ? ? WWPDB D_1000009572 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-02-21 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-28 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_conn 5 4 'Structure model' struct_site 6 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 454D _pdbx_database_status.recvd_initial_deposition_date 1999-03-03 _pdbx_database_status.deposit_site NDB _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kielkopf, C.L.' 1 'Erkkila, K.E.' 2 'Hudson, B.P.' 3 'Barton, J.K.' 4 'Rees, D.C.' 5 # _citation.id primary _citation.title 'Structure of a photoactive rhodium complex intercalated into DNA.' _citation.journal_abbrev Nat.Struct.Biol. _citation.journal_volume 7 _citation.page_first 117 _citation.page_last 121 _citation.year 2000 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10655613 _citation.pdbx_database_id_DOI 10.1038/72385 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kielkopf, C.L.' 1 ? primary 'Erkkila, K.E.' 2 ? primary 'Hudson, B.P.' 3 ? primary 'Barton, J.K.' 4 ? primary 'Rees, D.C.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*(5IU)P*TP*GP*CP*AP*AP*C)-3'" 2538.487 10 ? ? ? ? 2 non-polymer syn 'DELTA-ALPHA-RH[2R,9R-DIAMINO-4,7-DIAZADECANE]9,10-PHENANTHRENEQUINONE DIIMINE' 478.395 5 ? ? ? ? 3 water nat water 18.015 374 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DG)(5IU)(DT)(DG)(DC)(DA)(DA)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GUTGCAAC _entity_poly.pdbx_strand_id A,B,C,D,E,F,G,H,I,J _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'DELTA-ALPHA-RH[2R,9R-DIAMINO-4,7-DIAZADECANE]9,10-PHENANTHRENEQUINONE DIIMINE' RHM 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 5IU n 1 3 DT n 1 4 DG n 1 5 DC n 1 6 DA n 1 7 DA n 1 8 DC n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5IU 'DNA linking' n "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 I N2 O8 P' 434.078 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 RHM non-polymer . 'DELTA-ALPHA-RH[2R,9R-DIAMINO-4,7-DIAZADECANE]9,10-PHENANTHRENEQUINONE DIIMINE' 'RH(ME2TRIEN)PHI' 'C22 H27 N6 Rh 2' 478.395 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 5IU 2 2 2 5IU 5IU A . n A 1 3 DT 3 3 3 DT T A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DA 6 6 6 DA A A . n A 1 7 DA 7 7 7 DA A A . n A 1 8 DC 8 8 8 DC C A . n B 1 1 DG 1 9 9 DG G B . n B 1 2 5IU 2 10 10 5IU 5IU B . n B 1 3 DT 3 11 11 DT T B . n B 1 4 DG 4 12 12 DG G B . n B 1 5 DC 5 13 13 DC C B . n B 1 6 DA 6 14 14 DA A B . n B 1 7 DA 7 15 15 DA A B . n B 1 8 DC 8 16 16 DC C B . n C 1 1 DG 1 17 17 DG G C . n C 1 2 5IU 2 18 18 5IU 5IU C . n C 1 3 DT 3 19 19 DT T C . n C 1 4 DG 4 20 20 DG G C . n C 1 5 DC 5 21 21 DC C C . n C 1 6 DA 6 22 22 DA A C . n C 1 7 DA 7 23 23 DA A C . n C 1 8 DC 8 24 24 DC C C . n D 1 1 DG 1 25 25 DG G D . n D 1 2 5IU 2 26 26 5IU 5IU D . n D 1 3 DT 3 27 27 DT T D . n D 1 4 DG 4 28 28 DG G D . n D 1 5 DC 5 29 29 DC C D . n D 1 6 DA 6 30 30 DA A D . n D 1 7 DA 7 31 31 DA A D . n D 1 8 DC 8 32 32 DC C D . n E 1 1 DG 1 33 33 DG G E . n E 1 2 5IU 2 34 34 5IU 5IU E . n E 1 3 DT 3 35 35 DT T E . n E 1 4 DG 4 36 36 DG G E . n E 1 5 DC 5 37 37 DC C E . n E 1 6 DA 6 38 38 DA A E . n E 1 7 DA 7 39 39 DA A E . n E 1 8 DC 8 40 40 DC C E . n F 1 1 DG 1 41 41 DG G F . n F 1 2 5IU 2 42 42 5IU 5IU F . n F 1 3 DT 3 43 43 DT T F . n F 1 4 DG 4 44 44 DG G F . n F 1 5 DC 5 45 45 DC C F . n F 1 6 DA 6 46 46 DA A F . n F 1 7 DA 7 47 47 DA A F . n F 1 8 DC 8 48 48 DC C F . n G 1 1 DG 1 49 49 DG G G . n G 1 2 5IU 2 50 50 5IU 5IU G . n G 1 3 DT 3 51 51 DT T G . n G 1 4 DG 4 52 52 DG G G . n G 1 5 DC 5 53 53 DC C G . n G 1 6 DA 6 54 54 DA A G . n G 1 7 DA 7 55 55 DA A G . n G 1 8 DC 8 56 56 DC C G . n H 1 1 DG 1 57 57 DG G H . n H 1 2 5IU 2 58 58 5IU 5IU H . n H 1 3 DT 3 59 59 DT T H . n H 1 4 DG 4 60 60 DG G H . n H 1 5 DC 5 61 61 DC C H . n H 1 6 DA 6 62 62 DA A H . n H 1 7 DA 7 63 63 DA A H . n H 1 8 DC 8 64 64 DC C H . n I 1 1 DG 1 65 65 DG G I . n I 1 2 5IU 2 66 66 5IU 5IU I . n I 1 3 DT 3 67 67 DT T I . n I 1 4 DG 4 68 68 DG G I . n I 1 5 DC 5 69 69 DC C I . n I 1 6 DA 6 70 70 DA A I . n I 1 7 DA 7 71 71 DA A I . n I 1 8 DC 8 72 72 DC C I . n J 1 1 DG 1 73 73 DG G J . n J 1 2 5IU 2 74 74 5IU 5IU J . n J 1 3 DT 3 75 75 DT T J . n J 1 4 DG 4 76 76 DG G J . n J 1 5 DC 5 77 77 DC C J . n J 1 6 DA 6 78 78 DA A J . n J 1 7 DA 7 79 79 DA A J . n J 1 8 DC 8 80 80 DC C J . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code K 2 RHM 1 81 81 RHM RHM B . L 2 RHM 1 82 82 RHM RHM D . M 2 RHM 1 83 83 RHM RHM E . N 2 RHM 1 84 84 RHM RHM G . O 2 RHM 1 85 85 RHM RHM J . P 3 HOH 1 86 86 HOH HOH A . P 3 HOH 2 87 87 HOH HOH A . P 3 HOH 3 91 91 HOH HOH A . P 3 HOH 4 94 94 HOH HOH A . P 3 HOH 5 101 101 HOH HOH A . P 3 HOH 6 120 120 HOH HOH A . P 3 HOH 7 154 154 HOH HOH A . P 3 HOH 8 170 170 HOH HOH A . P 3 HOH 9 173 173 HOH HOH A . P 3 HOH 10 180 180 HOH HOH A . P 3 HOH 11 182 182 HOH HOH A . P 3 HOH 12 183 183 HOH HOH A . P 3 HOH 13 184 184 HOH HOH A . P 3 HOH 14 191 191 HOH HOH A . P 3 HOH 15 211 211 HOH HOH A . P 3 HOH 16 223 223 HOH HOH A . P 3 HOH 17 227 227 HOH HOH A . P 3 HOH 18 232 232 HOH HOH A . P 3 HOH 19 241 241 HOH HOH A . P 3 HOH 20 249 249 HOH HOH A . P 3 HOH 21 295 295 HOH HOH A . P 3 HOH 22 299 299 HOH HOH A . P 3 HOH 23 338 338 HOH HOH A . P 3 HOH 24 364 364 HOH HOH A . P 3 HOH 25 368 368 HOH HOH A . P 3 HOH 26 369 369 HOH HOH A . P 3 HOH 27 370 370 HOH HOH A . P 3 HOH 28 371 371 HOH HOH A . P 3 HOH 29 381 381 HOH HOH A . P 3 HOH 30 392 392 HOH HOH A . P 3 HOH 31 393 393 HOH HOH A . P 3 HOH 32 402 402 HOH HOH A . P 3 HOH 33 405 405 HOH HOH A . P 3 HOH 34 406 406 HOH HOH A . P 3 HOH 35 431 431 HOH HOH A . P 3 HOH 36 433 433 HOH HOH A . P 3 HOH 37 434 434 HOH HOH A . P 3 HOH 38 435 435 HOH HOH A . P 3 HOH 39 439 439 HOH HOH A . P 3 HOH 40 440 440 HOH HOH A . P 3 HOH 41 446 446 HOH HOH A . P 3 HOH 42 470 470 HOH HOH A . P 3 HOH 43 471 471 HOH HOH A . P 3 HOH 44 474 474 HOH HOH A . P 3 HOH 45 475 475 HOH HOH A . P 3 HOH 46 476 476 HOH HOH A . P 3 HOH 47 486 486 HOH HOH A . P 3 HOH 48 497 497 HOH HOH A . Q 3 HOH 1 92 92 HOH HOH B . Q 3 HOH 2 93 93 HOH HOH B . Q 3 HOH 3 95 95 HOH HOH B . Q 3 HOH 4 96 96 HOH HOH B . Q 3 HOH 5 97 97 HOH HOH B . Q 3 HOH 6 99 99 HOH HOH B . Q 3 HOH 7 103 103 HOH HOH B . Q 3 HOH 8 104 104 HOH HOH B . Q 3 HOH 9 106 106 HOH HOH B . Q 3 HOH 10 107 107 HOH HOH B . Q 3 HOH 11 152 152 HOH HOH B . Q 3 HOH 12 153 153 HOH HOH B . Q 3 HOH 13 155 155 HOH HOH B . Q 3 HOH 14 167 167 HOH HOH B . Q 3 HOH 15 168 168 HOH HOH B . Q 3 HOH 16 172 172 HOH HOH B . Q 3 HOH 17 174 174 HOH HOH B . Q 3 HOH 18 188 188 HOH HOH B . Q 3 HOH 19 189 189 HOH HOH B . Q 3 HOH 20 190 190 HOH HOH B . Q 3 HOH 21 195 195 HOH HOH B . Q 3 HOH 22 197 197 HOH HOH B . Q 3 HOH 23 198 198 HOH HOH B . Q 3 HOH 24 238 238 HOH HOH B . Q 3 HOH 25 242 242 HOH HOH B . Q 3 HOH 26 243 243 HOH HOH B . Q 3 HOH 27 246 246 HOH HOH B . Q 3 HOH 28 275 275 HOH HOH B . Q 3 HOH 29 276 276 HOH HOH B . Q 3 HOH 30 296 296 HOH HOH B . Q 3 HOH 31 297 297 HOH HOH B . Q 3 HOH 32 298 298 HOH HOH B . Q 3 HOH 33 316 316 HOH HOH B . Q 3 HOH 34 365 365 HOH HOH B . Q 3 HOH 35 366 366 HOH HOH B . Q 3 HOH 36 367 367 HOH HOH B . Q 3 HOH 37 382 382 HOH HOH B . Q 3 HOH 38 383 383 HOH HOH B . Q 3 HOH 39 394 394 HOH HOH B . Q 3 HOH 40 395 395 HOH HOH B . Q 3 HOH 41 396 396 HOH HOH B . Q 3 HOH 42 401 401 HOH HOH B . Q 3 HOH 43 427 427 HOH HOH B . Q 3 HOH 44 428 428 HOH HOH B . Q 3 HOH 45 429 429 HOH HOH B . Q 3 HOH 46 469 469 HOH HOH B . Q 3 HOH 47 485 485 HOH HOH B . R 3 HOH 1 102 102 HOH HOH C . R 3 HOH 2 137 137 HOH HOH C . R 3 HOH 3 177 177 HOH HOH C . R 3 HOH 4 255 255 HOH HOH C . R 3 HOH 5 257 257 HOH HOH C . R 3 HOH 6 300 300 HOH HOH C . R 3 HOH 7 341 341 HOH HOH C . R 3 HOH 8 346 346 HOH HOH C . R 3 HOH 9 350 350 HOH HOH C . R 3 HOH 10 353 353 HOH HOH C . R 3 HOH 11 363 363 HOH HOH C . R 3 HOH 12 377 377 HOH HOH C . R 3 HOH 13 391 391 HOH HOH C . R 3 HOH 14 398 398 HOH HOH C . R 3 HOH 15 409 409 HOH HOH C . R 3 HOH 16 444 444 HOH HOH C . S 3 HOH 1 98 98 HOH HOH D . S 3 HOH 2 100 100 HOH HOH D . S 3 HOH 3 105 105 HOH HOH D . S 3 HOH 4 144 144 HOH HOH D . S 3 HOH 5 148 148 HOH HOH D . S 3 HOH 6 157 157 HOH HOH D . S 3 HOH 7 196 196 HOH HOH D . S 3 HOH 8 199 199 HOH HOH D . S 3 HOH 9 247 247 HOH HOH D . S 3 HOH 10 248 248 HOH HOH D . S 3 HOH 11 320 320 HOH HOH D . S 3 HOH 12 340 340 HOH HOH D . S 3 HOH 13 342 342 HOH HOH D . S 3 HOH 14 347 347 HOH HOH D . S 3 HOH 15 348 348 HOH HOH D . S 3 HOH 16 351 351 HOH HOH D . S 3 HOH 17 390 390 HOH HOH D . S 3 HOH 18 397 397 HOH HOH D . S 3 HOH 19 407 407 HOH HOH D . S 3 HOH 20 408 408 HOH HOH D . S 3 HOH 21 441 441 HOH HOH D . S 3 HOH 22 442 442 HOH HOH D . S 3 HOH 23 445 445 HOH HOH D . S 3 HOH 24 505 505 HOH HOH D . T 3 HOH 1 89 89 HOH HOH E . T 3 HOH 2 90 90 HOH HOH E . T 3 HOH 3 109 109 HOH HOH E . T 3 HOH 4 115 115 HOH HOH E . T 3 HOH 5 116 116 HOH HOH E . T 3 HOH 6 118 118 HOH HOH E . T 3 HOH 7 119 119 HOH HOH E . T 3 HOH 8 123 123 HOH HOH E . T 3 HOH 9 125 125 HOH HOH E . T 3 HOH 10 126 126 HOH HOH E . T 3 HOH 11 133 133 HOH HOH E . T 3 HOH 12 138 138 HOH HOH E . T 3 HOH 13 140 140 HOH HOH E . T 3 HOH 14 141 141 HOH HOH E . T 3 HOH 15 142 142 HOH HOH E . T 3 HOH 16 161 161 HOH HOH E . T 3 HOH 17 165 165 HOH HOH E . T 3 HOH 18 169 169 HOH HOH E . T 3 HOH 19 171 171 HOH HOH E . T 3 HOH 20 179 179 HOH HOH E . T 3 HOH 21 181 181 HOH HOH E . T 3 HOH 22 212 212 HOH HOH E . T 3 HOH 23 258 258 HOH HOH E . T 3 HOH 24 259 259 HOH HOH E . T 3 HOH 25 260 260 HOH HOH E . T 3 HOH 26 265 265 HOH HOH E . T 3 HOH 27 266 266 HOH HOH E . T 3 HOH 28 267 267 HOH HOH E . T 3 HOH 29 269 269 HOH HOH E . T 3 HOH 30 281 281 HOH HOH E . T 3 HOH 31 288 288 HOH HOH E . T 3 HOH 32 289 289 HOH HOH E . T 3 HOH 33 313 313 HOH HOH E . T 3 HOH 34 327 327 HOH HOH E . T 3 HOH 35 329 329 HOH HOH E . T 3 HOH 36 333 333 HOH HOH E . T 3 HOH 37 345 345 HOH HOH E . T 3 HOH 38 387 387 HOH HOH E . T 3 HOH 39 388 388 HOH HOH E . T 3 HOH 40 404 404 HOH HOH E . T 3 HOH 41 414 414 HOH HOH E . T 3 HOH 42 415 415 HOH HOH E . T 3 HOH 43 416 416 HOH HOH E . T 3 HOH 44 417 417 HOH HOH E . T 3 HOH 45 418 418 HOH HOH E . T 3 HOH 46 419 419 HOH HOH E . T 3 HOH 47 426 426 HOH HOH E . T 3 HOH 48 450 450 HOH HOH E . T 3 HOH 49 453 453 HOH HOH E . T 3 HOH 50 463 463 HOH HOH E . T 3 HOH 51 478 478 HOH HOH E . T 3 HOH 52 483 483 HOH HOH E . T 3 HOH 53 484 484 HOH HOH E . U 3 HOH 1 88 88 HOH HOH F . U 3 HOH 2 108 108 HOH HOH F . U 3 HOH 3 110 110 HOH HOH F . U 3 HOH 4 111 111 HOH HOH F . U 3 HOH 5 114 114 HOH HOH F . U 3 HOH 6 117 117 HOH HOH F . U 3 HOH 7 121 121 HOH HOH F . U 3 HOH 8 122 122 HOH HOH F . U 3 HOH 9 124 124 HOH HOH F . U 3 HOH 10 127 127 HOH HOH F . U 3 HOH 11 128 128 HOH HOH F . U 3 HOH 12 129 129 HOH HOH F . U 3 HOH 13 139 139 HOH HOH F . U 3 HOH 14 162 162 HOH HOH F . U 3 HOH 15 163 163 HOH HOH F . U 3 HOH 16 164 164 HOH HOH F . U 3 HOH 17 166 166 HOH HOH F . U 3 HOH 18 185 185 HOH HOH F . U 3 HOH 19 186 186 HOH HOH F . U 3 HOH 20 187 187 HOH HOH F . U 3 HOH 21 210 210 HOH HOH F . U 3 HOH 22 213 213 HOH HOH F . U 3 HOH 23 214 214 HOH HOH F . U 3 HOH 24 215 215 HOH HOH F . U 3 HOH 25 216 216 HOH HOH F . U 3 HOH 26 217 217 HOH HOH F . U 3 HOH 27 219 219 HOH HOH F . U 3 HOH 28 220 220 HOH HOH F . U 3 HOH 29 221 221 HOH HOH F . U 3 HOH 30 222 222 HOH HOH F . U 3 HOH 31 224 224 HOH HOH F . U 3 HOH 32 226 226 HOH HOH F . U 3 HOH 33 229 229 HOH HOH F . U 3 HOH 34 240 240 HOH HOH F . U 3 HOH 35 261 261 HOH HOH F . U 3 HOH 36 262 262 HOH HOH F . U 3 HOH 37 263 263 HOH HOH F . U 3 HOH 38 264 264 HOH HOH F . U 3 HOH 39 280 280 HOH HOH F . U 3 HOH 40 291 291 HOH HOH F . U 3 HOH 41 292 292 HOH HOH F . U 3 HOH 42 293 293 HOH HOH F . U 3 HOH 43 310 310 HOH HOH F . U 3 HOH 44 328 328 HOH HOH F . U 3 HOH 45 330 330 HOH HOH F . U 3 HOH 46 336 336 HOH HOH F . U 3 HOH 47 337 337 HOH HOH F . U 3 HOH 48 354 354 HOH HOH F . U 3 HOH 49 355 355 HOH HOH F . U 3 HOH 50 356 356 HOH HOH F . U 3 HOH 51 357 357 HOH HOH F . U 3 HOH 52 372 372 HOH HOH F . U 3 HOH 53 373 373 HOH HOH F . U 3 HOH 54 374 374 HOH HOH F . U 3 HOH 55 375 375 HOH HOH F . U 3 HOH 56 376 376 HOH HOH F . U 3 HOH 57 386 386 HOH HOH F . U 3 HOH 58 389 389 HOH HOH F . U 3 HOH 59 403 403 HOH HOH F . U 3 HOH 60 420 420 HOH HOH F . U 3 HOH 61 421 421 HOH HOH F . U 3 HOH 62 422 422 HOH HOH F . U 3 HOH 63 423 423 HOH HOH F . U 3 HOH 64 424 424 HOH HOH F . U 3 HOH 65 425 425 HOH HOH F . U 3 HOH 66 437 437 HOH HOH F . U 3 HOH 67 438 438 HOH HOH F . U 3 HOH 68 447 447 HOH HOH F . U 3 HOH 69 452 452 HOH HOH F . U 3 HOH 70 454 454 HOH HOH F . U 3 HOH 71 460 460 HOH HOH F . U 3 HOH 72 472 472 HOH HOH F . U 3 HOH 73 477 477 HOH HOH F . V 3 HOH 1 113 113 HOH HOH G . V 3 HOH 2 130 130 HOH HOH G . V 3 HOH 3 131 131 HOH HOH G . V 3 HOH 4 132 132 HOH HOH G . V 3 HOH 5 135 135 HOH HOH G . V 3 HOH 6 136 136 HOH HOH G . V 3 HOH 7 156 156 HOH HOH G . V 3 HOH 8 158 158 HOH HOH G . V 3 HOH 9 159 159 HOH HOH G . V 3 HOH 10 160 160 HOH HOH G . V 3 HOH 11 178 178 HOH HOH G . V 3 HOH 12 193 193 HOH HOH G . V 3 HOH 13 194 194 HOH HOH G . V 3 HOH 14 225 225 HOH HOH G . V 3 HOH 15 230 230 HOH HOH G . V 3 HOH 16 233 233 HOH HOH G . V 3 HOH 17 235 235 HOH HOH G . V 3 HOH 18 236 236 HOH HOH G . V 3 HOH 19 237 237 HOH HOH G . V 3 HOH 20 239 239 HOH HOH G . V 3 HOH 21 244 244 HOH HOH G . V 3 HOH 22 250 250 HOH HOH G . V 3 HOH 23 252 252 HOH HOH G . V 3 HOH 24 253 253 HOH HOH G . V 3 HOH 25 254 254 HOH HOH G . V 3 HOH 26 273 273 HOH HOH G . V 3 HOH 27 274 274 HOH HOH G . V 3 HOH 28 277 277 HOH HOH G . V 3 HOH 29 279 279 HOH HOH G . V 3 HOH 30 283 283 HOH HOH G . V 3 HOH 31 284 284 HOH HOH G . V 3 HOH 32 285 285 HOH HOH G . V 3 HOH 33 305 305 HOH HOH G . V 3 HOH 34 307 307 HOH HOH G . V 3 HOH 35 312 312 HOH HOH G . V 3 HOH 36 314 314 HOH HOH G . V 3 HOH 37 315 315 HOH HOH G . V 3 HOH 38 317 317 HOH HOH G . V 3 HOH 39 331 331 HOH HOH G . V 3 HOH 40 411 411 HOH HOH G . V 3 HOH 41 455 455 HOH HOH G . V 3 HOH 42 456 456 HOH HOH G . V 3 HOH 43 457 457 HOH HOH G . V 3 HOH 44 459 459 HOH HOH G . V 3 HOH 45 461 461 HOH HOH G . V 3 HOH 46 464 464 HOH HOH G . V 3 HOH 47 465 465 HOH HOH G . V 3 HOH 48 468 468 HOH HOH G . V 3 HOH 49 473 473 HOH HOH G . W 3 HOH 1 112 112 HOH HOH H . W 3 HOH 2 134 134 HOH HOH H . W 3 HOH 3 192 192 HOH HOH H . W 3 HOH 4 207 207 HOH HOH H . W 3 HOH 5 208 208 HOH HOH H . W 3 HOH 6 218 218 HOH HOH H . W 3 HOH 7 231 231 HOH HOH H . W 3 HOH 8 234 234 HOH HOH H . W 3 HOH 9 251 251 HOH HOH H . W 3 HOH 10 268 268 HOH HOH H . W 3 HOH 11 270 270 HOH HOH H . W 3 HOH 12 271 271 HOH HOH H . W 3 HOH 13 278 278 HOH HOH H . W 3 HOH 14 286 286 HOH HOH H . W 3 HOH 15 308 308 HOH HOH H . W 3 HOH 16 332 332 HOH HOH H . W 3 HOH 17 334 334 HOH HOH H . W 3 HOH 18 344 344 HOH HOH H . W 3 HOH 19 358 358 HOH HOH H . W 3 HOH 20 378 378 HOH HOH H . W 3 HOH 21 379 379 HOH HOH H . W 3 HOH 22 380 380 HOH HOH H . W 3 HOH 23 384 384 HOH HOH H . W 3 HOH 24 385 385 HOH HOH H . W 3 HOH 25 412 412 HOH HOH H . W 3 HOH 26 413 413 HOH HOH H . W 3 HOH 27 448 448 HOH HOH H . W 3 HOH 28 449 449 HOH HOH H . W 3 HOH 29 458 458 HOH HOH H . W 3 HOH 30 466 466 HOH HOH H . W 3 HOH 31 467 467 HOH HOH H . X 3 HOH 1 145 145 HOH HOH I . X 3 HOH 2 147 147 HOH HOH I . X 3 HOH 3 149 149 HOH HOH I . X 3 HOH 4 175 175 HOH HOH I . X 3 HOH 5 200 200 HOH HOH I . X 3 HOH 6 228 228 HOH HOH I . X 3 HOH 7 256 256 HOH HOH I . X 3 HOH 8 287 287 HOH HOH I . X 3 HOH 9 304 304 HOH HOH I . X 3 HOH 10 323 323 HOH HOH I . X 3 HOH 11 360 360 HOH HOH I . X 3 HOH 12 362 362 HOH HOH I . X 3 HOH 13 462 462 HOH HOH I . X 3 HOH 14 482 482 HOH HOH I . Y 3 HOH 1 143 143 HOH HOH J . Y 3 HOH 2 146 146 HOH HOH J . Y 3 HOH 3 150 150 HOH HOH J . Y 3 HOH 4 151 151 HOH HOH J . Y 3 HOH 5 176 176 HOH HOH J . Y 3 HOH 6 201 201 HOH HOH J . Y 3 HOH 7 203 203 HOH HOH J . Y 3 HOH 8 204 204 HOH HOH J . Y 3 HOH 9 205 205 HOH HOH J . Y 3 HOH 10 301 301 HOH HOH J . Y 3 HOH 11 302 302 HOH HOH J . Y 3 HOH 12 322 322 HOH HOH J . Y 3 HOH 13 325 325 HOH HOH J . Y 3 HOH 14 326 326 HOH HOH J . Y 3 HOH 15 359 359 HOH HOH J . Y 3 HOH 16 410 410 HOH HOH J . Y 3 HOH 17 479 479 HOH HOH J . Y 3 HOH 18 480 480 HOH HOH J . Y 3 HOH 19 481 481 HOH HOH J . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SOLVE phasing . ? 1 SHELXL-97 refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 454D _cell.length_a 94.740 _cell.length_b 23.980 _cell.length_c 96.520 _cell.angle_alpha 90.00 _cell.angle_beta 93.24 _cell.angle_gamma 90.00 _cell.Z_PDB 40 _cell.pdbx_unique_axis ? # _symmetry.entry_id 454D _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 5 # _exptl.entry_id 454D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 40.79 _exptl_crystal.density_Matthews 2.08 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'MPD, CALCIUM ACETATE, SODIUM CACODYLATE, PH 7.0, VAPOR DIFFUSION, SITTING DROP at 277 K, temperature 277.0K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'CALCIUM ACETATE' ? ? ? 1 2 1 'SODIUM CACODYLATE' ? ? ? 1 3 1 MPD ? ? ? 1 4 2 MPD ? ? ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 103 ? 1 2 103 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 'IMAGE PLATE' 'RIGAKU RAXIS IV' ? ? 2 'IMAGE PLATE' MARRESEARCH ? ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M ? 'SINGLE WAVELENGTH' x-ray 2 1 M ? 'SINGLE WAVELENGTH' x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.5418 1.0 2 0.9800 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 'ROTATING ANODE' RIGAKU ? ? 1.5418 ? 2 SYNCHROTRON 'SSRL BEAMLINE BL9-1' SSRL BL9-1 0.9800 ? # _reflns.entry_id 454D _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 17.0 _reflns.d_resolution_high 1.2 _reflns.number_obs 122830 _reflns.number_all 122830 _reflns.percent_possible_obs 92.5 _reflns.pdbx_Rmerge_I_obs 0.0680000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 25.0 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.9 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.2 _reflns_shell.d_res_low 1.3 _reflns_shell.percent_possible_all 88.2 _reflns_shell.Rmerge_I_obs 0.2780000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 454D _refine.ls_number_reflns_obs 122830 _refine.ls_number_reflns_all 122830 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 17.0 _refine.ls_d_res_high 1.2 _refine.ls_percent_reflns_obs 92.50 _refine.ls_R_factor_obs 0.1700000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1700000 _refine.ls_R_factor_R_free 0.2100000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5 _refine.ls_number_reflns_R_free 6141 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'INITIAL MODEL OBTAINED BY SIRAS WITH 10 IODINE POSITIONS' _refine.pdbx_method_to_determine_struct SIRAS _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1658 _refine_hist.pdbx_number_atoms_ligand 145 _refine_hist.number_atoms_solvent 374 _refine_hist.number_atoms_total 2177 _refine_hist.d_res_high 1.2 _refine_hist.d_res_low 17.0 # _database_PDB_matrix.entry_id 454D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 454D _struct.title ;INTERCALATION AND MAJOR GROOVE RECOGNITION IN THE 1.2 A RESOLUTION CRYSTAL STRUCTURE OF RH[ME2TRIEN]PHI BOUND TO 5'-G(5IU)TGCAAC-3' ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 454D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'METALLOINTERCALATOR, INTERCALATION, MAJOR GROOVE RECOGNITION, PHOTOEXCITABLE, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 1 ? J N N 1 ? K N N 2 ? L N N 2 ? M N N 2 ? N N N 2 ? O N N 2 ? P N N 3 ? Q N N 3 ? R N N 3 ? S N N 3 ? T N N 3 ? U N N 3 ? V N N 3 ? W N N 3 ? X N N 3 ? Y N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 454D _struct_ref.pdbx_db_accession 454D _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 454D A 1 ? 8 ? 454D 1 ? 8 ? 1 8 2 1 454D B 1 ? 8 ? 454D 9 ? 16 ? 9 16 3 1 454D C 1 ? 8 ? 454D 17 ? 24 ? 17 24 4 1 454D D 1 ? 8 ? 454D 25 ? 32 ? 25 32 5 1 454D E 1 ? 8 ? 454D 33 ? 40 ? 33 40 6 1 454D F 1 ? 8 ? 454D 41 ? 48 ? 41 48 7 1 454D G 1 ? 8 ? 454D 49 ? 56 ? 49 56 8 1 454D H 1 ? 8 ? 454D 57 ? 64 ? 57 64 9 1 454D I 1 ? 8 ? 454D 65 ? 72 ? 65 72 10 1 454D J 1 ? 8 ? 454D 73 ? 80 ? 73 80 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 3 author_defined_assembly ? dimeric 2 4 author_defined_assembly ? dimeric 2 5 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,K,P,Q 2 1 C,D,L,R,S 3 1 E,F,M,T,U 4 1 G,H,N,V,W 5 1 I,J,O,X,Y # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? 3 ? ? 4 ? ? 5 ? ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DG 1 "O3'" ? ? ? 1_555 A 5IU 2 P ? ? A DG 1 A 5IU 2 1_555 ? ? ? ? ? ? ? 1.591 ? ? covale2 covale both ? A 5IU 2 "O3'" ? ? ? 1_555 A DT 3 P ? ? A 5IU 2 A DT 3 1_555 ? ? ? ? ? ? ? 1.577 ? ? covale3 covale both ? B DG 1 "O3'" ? ? ? 1_555 B 5IU 2 P ? ? B DG 9 B 5IU 10 1_555 ? ? ? ? ? ? ? 1.587 ? ? covale4 covale both ? B 5IU 2 "O3'" ? ? ? 1_555 B DT 3 P ? ? B 5IU 10 B DT 11 1_555 ? ? ? ? ? ? ? 1.579 ? ? covale5 covale both ? C DG 1 "O3'" ? ? ? 1_555 C 5IU 2 P ? ? C DG 17 C 5IU 18 1_555 ? ? ? ? ? ? ? 1.586 ? ? covale6 covale both ? C 5IU 2 "O3'" ? ? ? 1_555 C DT 3 P ? ? C 5IU 18 C DT 19 1_555 ? ? ? ? ? ? ? 1.583 ? ? covale7 covale both ? D DG 1 "O3'" ? ? ? 1_555 D 5IU 2 P ? ? D DG 25 D 5IU 26 1_555 ? ? ? ? ? ? ? 1.576 ? ? covale8 covale both ? D 5IU 2 "O3'" ? ? ? 1_555 D DT 3 P ? ? D 5IU 26 D DT 27 1_555 ? ? ? ? ? ? ? 1.574 ? ? covale9 covale both ? E DG 1 "O3'" ? ? ? 1_555 E 5IU 2 P ? ? E DG 33 E 5IU 34 1_555 ? ? ? ? ? ? ? 1.555 ? ? covale10 covale both ? E 5IU 2 "O3'" ? ? ? 1_555 E DT 3 P ? ? E 5IU 34 E DT 35 1_555 ? ? ? ? ? ? ? 1.593 ? ? covale11 covale both ? F DG 1 "O3'" ? ? ? 1_555 F 5IU 2 P ? ? F DG 41 F 5IU 42 1_555 ? ? ? ? ? ? ? 1.568 ? ? covale12 covale both ? F 5IU 2 "O3'" ? ? ? 1_555 F DT 3 P ? ? F 5IU 42 F DT 43 1_555 ? ? ? ? ? ? ? 1.567 ? ? covale13 covale both ? G DG 1 "O3'" ? ? ? 1_555 G 5IU 2 P ? ? G DG 49 G 5IU 50 1_555 ? ? ? ? ? ? ? 1.576 ? ? covale14 covale both ? G 5IU 2 "O3'" ? ? ? 1_555 G DT 3 P ? ? G 5IU 50 G DT 51 1_555 ? ? ? ? ? ? ? 1.584 ? ? covale15 covale both ? H DG 1 "O3'" ? ? ? 1_555 H 5IU 2 P ? ? H DG 57 H 5IU 58 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale16 covale both ? H 5IU 2 "O3'" ? ? ? 1_555 H DT 3 P ? ? H 5IU 58 H DT 59 1_555 ? ? ? ? ? ? ? 1.625 ? ? covale17 covale both ? I DG 1 "O3'" ? ? ? 1_555 I 5IU 2 P ? ? I DG 65 I 5IU 66 1_555 ? ? ? ? ? ? ? 1.565 ? ? covale18 covale both ? I 5IU 2 "O3'" ? ? ? 1_555 I DT 3 P ? ? I 5IU 66 I DT 67 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale19 covale both ? J DG 1 "O3'" ? ? ? 1_555 J 5IU 2 P ? ? J DG 73 J 5IU 74 1_555 ? ? ? ? ? ? ? 1.589 ? ? covale20 covale both ? J 5IU 2 "O3'" ? ? ? 1_555 J DT 3 P ? ? J 5IU 74 J DT 75 1_555 ? ? ? ? ? ? ? 1.584 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 1 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 1 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 1 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A 5IU 2 N3 ? ? ? 1_555 B DA 7 N1 ? ? A 5IU 2 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A 5IU 2 O4 ? ? ? 1_555 B DA 7 N6 ? ? A 5IU 2 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 3 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 3 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 4 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 4 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 4 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 5 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 5 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 5 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 6 B DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 6 B DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B 5IU 2 N3 ? ? A DA 7 B 5IU 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B 5IU 2 O4 ? ? A DA 7 B 5IU 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 8 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 8 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 8 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 8 N3 ? ? C DG 17 D DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 8 O2 ? ? C DG 17 D DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 8 N4 ? ? C DG 17 D DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C 5IU 2 N3 ? ? ? 1_555 D DA 7 N1 ? ? C 5IU 18 D DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C 5IU 2 O4 ? ? ? 1_555 D DA 7 N6 ? ? C 5IU 18 D DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 6 N1 ? ? C DT 19 D DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 6 N6 ? ? C DT 19 D DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 5 N3 ? ? C DG 20 D DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 5 O2 ? ? C DG 20 D DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 5 N4 ? ? C DG 20 D DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DC 5 N3 ? ? ? 1_555 D DG 4 N1 A ? C DC 21 D DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 5 N4 ? ? ? 1_555 D DG 4 O6 A ? C DC 21 D DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 5 O2 ? ? ? 1_555 D DG 4 N2 A ? C DC 21 D DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DA 6 N1 ? ? ? 1_555 D DT 3 N3 ? ? C DA 22 D DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DA 6 N6 ? ? ? 1_555 D DT 3 O4 ? ? C DA 22 D DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DA 7 N1 A ? ? 1_555 D 5IU 2 N3 ? ? C DA 23 D 5IU 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DA 7 N6 A ? ? 1_555 D 5IU 2 O4 ? ? C DA 23 D 5IU 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 1 N1 ? ? C DC 24 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 1 O6 ? ? C DC 24 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 1 N2 ? ? C DC 24 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E DG 1 N1 ? ? ? 1_555 F DC 8 N3 ? ? E DG 33 F DC 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E DG 1 N2 ? ? ? 1_555 F DC 8 O2 ? ? E DG 33 F DC 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E DG 1 O6 ? ? ? 1_555 F DC 8 N4 ? ? E DG 33 F DC 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E 5IU 2 N3 ? ? ? 1_555 F DA 7 N1 ? ? E 5IU 34 F DA 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? E 5IU 2 O4 ? ? ? 1_555 F DA 7 N6 ? ? E 5IU 34 F DA 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? E DT 3 N3 ? ? ? 1_555 F DA 6 N1 ? ? E DT 35 F DA 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? E DT 3 O4 ? ? ? 1_555 F DA 6 N6 ? ? E DT 35 F DA 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? E DG 4 N1 ? ? ? 1_555 F DC 5 N3 ? ? E DG 36 F DC 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? E DG 4 N2 ? ? ? 1_555 F DC 5 O2 ? ? E DG 36 F DC 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? E DG 4 O6 ? ? ? 1_555 F DC 5 N4 ? ? E DG 36 F DC 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? E DC 5 N3 ? ? ? 1_555 F DG 4 N1 ? ? E DC 37 F DG 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? E DC 5 N4 ? ? ? 1_555 F DG 4 O6 ? ? E DC 37 F DG 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? E DC 5 O2 ? ? ? 1_555 F DG 4 N2 ? ? E DC 37 F DG 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? E DA 6 N1 ? ? ? 1_555 F DT 3 N3 ? ? E DA 38 F DT 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? E DA 6 N6 ? ? ? 1_555 F DT 3 O4 ? ? E DA 38 F DT 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? E DA 7 N1 ? ? ? 1_555 F 5IU 2 N3 ? ? E DA 39 F 5IU 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? E DA 7 N6 ? ? ? 1_555 F 5IU 2 O4 ? ? E DA 39 F 5IU 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? E DC 8 N3 ? ? ? 1_555 F DG 1 N1 ? ? E DC 40 F DG 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? E DC 8 N4 ? ? ? 1_555 F DG 1 O6 ? ? E DC 40 F DG 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? E DC 8 O2 ? ? ? 1_555 F DG 1 N2 ? ? E DC 40 F DG 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? G DG 1 N1 ? ? ? 1_555 H DC 8 N3 ? ? G DG 49 H DC 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? G DG 1 N2 ? ? ? 1_555 H DC 8 O2 ? ? G DG 49 H DC 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? G DG 1 O6 ? ? ? 1_555 H DC 8 N4 ? ? G DG 49 H DC 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? G 5IU 2 N3 ? ? ? 1_555 H DA 7 N1 ? ? G 5IU 50 H DA 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? G 5IU 2 O4 ? ? ? 1_555 H DA 7 N6 ? ? G 5IU 50 H DA 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? G DT 3 N3 ? ? ? 1_555 H DA 6 N1 ? ? G DT 51 H DA 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? G DT 3 O4 ? ? ? 1_555 H DA 6 N6 ? ? G DT 51 H DA 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? G DG 4 N1 ? ? ? 1_555 H DC 5 N3 ? ? G DG 52 H DC 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? G DG 4 N2 ? ? ? 1_555 H DC 5 O2 ? ? G DG 52 H DC 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? G DG 4 O6 ? ? ? 1_555 H DC 5 N4 ? ? G DG 52 H DC 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? G DC 5 N3 ? ? ? 1_555 H DG 4 N1 ? ? G DC 53 H DG 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? G DC 5 N4 ? ? ? 1_555 H DG 4 O6 ? ? G DC 53 H DG 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? G DC 5 O2 ? ? ? 1_555 H DG 4 N2 ? ? G DC 53 H DG 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? G DA 6 N1 ? ? ? 1_555 H DT 3 N3 ? ? G DA 54 H DT 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? G DA 6 N6 ? ? ? 1_555 H DT 3 O4 ? ? G DA 54 H DT 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? G DA 7 N1 ? ? ? 1_555 H 5IU 2 N3 ? ? G DA 55 H 5IU 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? G DA 7 N6 ? ? ? 1_555 H 5IU 2 O4 ? ? G DA 55 H 5IU 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? G DC 8 N3 ? ? ? 1_555 H DG 1 N1 ? ? G DC 56 H DG 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? G DC 8 N4 ? ? ? 1_555 H DG 1 O6 ? ? G DC 56 H DG 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? G DC 8 O2 ? ? ? 1_555 H DG 1 N2 ? ? G DC 56 H DG 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? I DG 1 N1 ? ? ? 1_555 J DC 8 N3 ? ? I DG 65 J DC 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? I DG 1 N2 ? ? ? 1_555 J DC 8 O2 ? ? I DG 65 J DC 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? I DG 1 O6 ? ? ? 1_555 J DC 8 N4 ? ? I DG 65 J DC 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? I 5IU 2 N3 ? ? ? 1_555 J DA 7 N1 ? ? I 5IU 66 J DA 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? I 5IU 2 O4 ? ? ? 1_555 J DA 7 N6 ? ? I 5IU 66 J DA 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? I DT 3 N3 ? ? ? 1_555 J DA 6 N1 ? ? I DT 67 J DA 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? I DT 3 O4 ? ? ? 1_555 J DA 6 N6 ? ? I DT 67 J DA 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? I DG 4 N1 ? ? ? 1_555 J DC 5 N3 ? ? I DG 68 J DC 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? I DG 4 N2 ? ? ? 1_555 J DC 5 O2 ? ? I DG 68 J DC 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? I DG 4 O6 ? ? ? 1_555 J DC 5 N4 ? ? I DG 68 J DC 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? I DC 5 N3 ? ? ? 1_555 J DG 4 N1 ? ? I DC 69 J DG 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? I DC 5 N4 ? ? ? 1_555 J DG 4 O6 ? ? I DC 69 J DG 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? I DC 5 O2 ? ? ? 1_555 J DG 4 N2 ? ? I DC 69 J DG 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? I DA 6 N1 ? ? ? 1_555 J DT 3 N3 ? ? I DA 70 J DT 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? I DA 6 N6 ? ? ? 1_555 J DT 3 O4 ? ? I DA 70 J DT 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? I DA 7 N1 ? ? ? 1_555 J 5IU 2 N3 ? ? I DA 71 J 5IU 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? I DA 7 N6 ? ? ? 1_555 J 5IU 2 O4 ? ? I DA 71 J 5IU 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? I DC 8 N3 ? ? ? 1_555 J DG 1 N1 ? ? I DC 72 J DG 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? I DC 8 N4 ? ? ? 1_555 J DG 1 O6 ? ? I DC 72 J DG 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? I DC 8 O2 ? ? ? 1_555 J DG 1 N2 ? ? I DC 72 J DG 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B RHM 81 ? 12 'BINDING SITE FOR RESIDUE RHM B 81' AC2 Software D RHM 82 ? 9 'BINDING SITE FOR RESIDUE RHM D 82' AC3 Software E RHM 83 ? 11 'BINDING SITE FOR RESIDUE RHM E 83' AC4 Software G RHM 84 ? 11 'BINDING SITE FOR RESIDUE RHM G 84' AC5 Software J RHM 85 ? 9 'BINDING SITE FOR RESIDUE RHM J 85' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 DT A 3 ? DT A 3 . ? 1_555 ? 2 AC1 12 DG A 4 ? DG A 4 . ? 1_555 ? 3 AC1 12 DC A 5 ? DC A 5 . ? 1_555 ? 4 AC1 12 HOH P . ? HOH A 94 . ? 1_555 ? 5 AC1 12 DG B 4 ? DG B 12 . ? 1_555 ? 6 AC1 12 DC B 5 ? DC B 13 . ? 1_555 ? 7 AC1 12 DC B 8 ? DC B 16 . ? 1_545 ? 8 AC1 12 HOH Q . ? HOH B 95 . ? 1_555 ? 9 AC1 12 HOH Q . ? HOH B 246 . ? 1_555 ? 10 AC1 12 HOH Q . ? HOH B 275 . ? 1_555 ? 11 AC1 12 HOH Q . ? HOH B 276 . ? 1_555 ? 12 AC1 12 5IU E 2 ? 5IU E 34 . ? 4_556 ? 13 AC2 9 DT C 3 ? DT C 19 . ? 1_555 ? 14 AC2 9 DT C 3 ? DT C 19 . ? 2_657 ? 15 AC2 9 DG C 4 ? DG C 20 . ? 1_555 ? 16 AC2 9 DC C 5 ? DC C 21 . ? 1_555 ? 17 AC2 9 DT D 3 ? DT D 27 . ? 1_555 ? 18 AC2 9 DG D 4 ? DG D 28 . ? 1_555 ? 19 AC2 9 DC D 5 ? DC D 29 . ? 1_555 ? 20 AC2 9 HOH S . ? HOH D 247 . ? 1_555 ? 21 AC2 9 HOH S . ? HOH D 340 . ? 1_555 ? 22 AC3 11 5IU A 2 ? 5IU A 2 . ? 4_546 ? 23 AC3 11 DT E 3 ? DT E 35 . ? 1_555 ? 24 AC3 11 DG E 4 ? DG E 36 . ? 1_555 ? 25 AC3 11 DC E 5 ? DC E 37 . ? 1_555 ? 26 AC3 11 HOH T . ? HOH E 119 . ? 1_555 ? 27 AC3 11 HOH T . ? HOH E 138 . ? 1_555 ? 28 AC3 11 HOH T . ? HOH E 142 . ? 1_555 ? 29 AC3 11 HOH T . ? HOH E 161 . ? 1_555 ? 30 AC3 11 DG F 4 ? DG F 44 . ? 1_555 ? 31 AC3 11 DC F 5 ? DC F 45 . ? 1_555 ? 32 AC3 11 DC F 8 ? DC F 48 . ? 1_565 ? 33 AC4 11 DG G 4 ? DG G 52 . ? 1_555 ? 34 AC4 11 DC G 5 ? DC G 53 . ? 1_555 ? 35 AC4 11 HOH V . ? HOH G 113 . ? 1_555 ? 36 AC4 11 HOH V . ? HOH G 131 . ? 1_555 ? 37 AC4 11 HOH V . ? HOH G 250 . ? 1_555 ? 38 AC4 11 HOH V . ? HOH G 253 . ? 1_555 ? 39 AC4 11 HOH V . ? HOH G 254 . ? 1_555 ? 40 AC4 11 HOH V . ? HOH G 455 . ? 1_555 ? 41 AC4 11 DT H 3 ? DT H 59 . ? 1_555 ? 42 AC4 11 DG H 4 ? DG H 60 . ? 1_555 ? 43 AC4 11 DC H 5 ? DC H 61 . ? 1_555 ? 44 AC5 9 DA C 7 ? DA C 23 . ? 4_647 ? 45 AC5 9 DC C 8 ? DC C 24 . ? 4_647 ? 46 AC5 9 DC D 5 ? DC D 29 . ? 4_647 ? 47 AC5 9 HOH S . ? HOH D 196 . ? 4_647 ? 48 AC5 9 DG I 4 ? DG I 68 . ? 1_555 ? 49 AC5 9 DC I 5 ? DC I 69 . ? 1_555 ? 50 AC5 9 DG J 4 ? DG J 76 . ? 1_555 ? 51 AC5 9 DC J 5 ? DC J 77 . ? 1_555 ? 52 AC5 9 HOH Y . ? HOH J 201 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? 1.500 1.420 0.080 0.011 N 2 1 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? 1.511 1.420 0.091 0.011 N 3 1 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? 1.491 1.420 0.071 0.011 N 4 1 "O4'" B DT 11 ? ? "C1'" B DT 11 ? ? 1.491 1.420 0.071 0.011 N 5 1 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? 1.499 1.420 0.079 0.011 N 6 1 "O4'" B DC 16 ? ? "C1'" B DC 16 ? ? 1.492 1.420 0.072 0.011 N 7 1 "O4'" C DA 23 ? A "C1'" C DA 23 ? A 1.489 1.420 0.069 0.011 N 8 1 "O4'" C DC 24 ? ? "C1'" C DC 24 ? ? 1.496 1.420 0.076 0.011 N 9 1 "O4'" D DG 25 ? ? "C1'" D DG 25 ? ? 1.488 1.420 0.068 0.011 N 10 1 "O4'" D DC 29 ? ? "C1'" D DC 29 ? ? 1.487 1.420 0.067 0.011 N 11 1 "O4'" E DG 36 ? ? "C1'" E DG 36 ? ? 1.487 1.420 0.067 0.011 N 12 1 "O4'" E DA 38 ? ? "C1'" E DA 38 ? ? 1.504 1.420 0.084 0.011 N 13 1 "O4'" F DC 45 ? ? "C1'" F DC 45 ? ? 1.509 1.420 0.089 0.011 N 14 1 "O4'" F DA 46 ? ? "C1'" F DA 46 ? ? 1.516 1.420 0.096 0.011 N 15 1 "O4'" G DA 54 ? ? "C1'" G DA 54 ? ? 1.524 1.420 0.104 0.011 N 16 1 "O4'" H DT 59 ? ? "C1'" H DT 59 ? ? 1.489 1.420 0.069 0.011 N 17 1 "O4'" I DC 69 ? ? "C1'" I DC 69 ? ? 1.490 1.420 0.070 0.011 N 18 1 "O4'" I DC 72 ? ? "C1'" I DC 72 ? ? 1.487 1.420 0.067 0.011 N 19 1 "O4'" J DT 75 ? ? "C1'" J DT 75 ? ? 1.490 1.420 0.070 0.011 N 20 1 "O4'" J DA 78 ? ? "C1'" J DA 78 ? ? 1.495 1.420 0.075 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N3 A DG 1 ? ? C2 A DG 1 ? ? N2 A DG 1 ? ? 114.98 119.90 -4.92 0.70 N 2 1 C2 A DG 4 ? ? N3 A DG 4 ? ? C4 A DG 4 ? ? 115.52 111.90 3.62 0.50 N 3 1 N3 A DG 4 ? ? C2 A DG 4 ? ? N2 A DG 4 ? ? 124.32 119.90 4.42 0.70 N 4 1 "C3'" A DG 4 ? ? "O3'" A DG 4 ? ? P A DC 5 ? ? 127.88 119.70 8.18 1.20 Y 5 1 "O5'" A DC 5 ? ? "C5'" A DC 5 ? ? "C4'" A DC 5 ? ? 102.08 109.40 -7.32 0.80 N 6 1 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 99.57 108.00 -8.43 0.70 N 7 1 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 114.98 118.60 -3.62 0.60 N 8 1 "C3'" A DA 6 ? ? "O3'" A DA 6 ? ? P A DA 7 ? ? 132.15 119.70 12.45 1.20 Y 9 1 "C3'" A DA 7 ? ? "O3'" A DA 7 ? ? P A DC 8 ? ? 127.19 119.70 7.49 1.20 Y 10 1 P A DC 8 ? ? "O5'" A DC 8 ? ? "C5'" A DC 8 ? ? 104.12 120.90 -16.78 1.60 N 11 1 "C1'" A DC 8 ? ? "O4'" A DC 8 ? ? "C4'" A DC 8 ? ? 102.89 110.10 -7.21 1.00 N 12 1 "O4'" B DT 11 ? ? "C1'" B DT 11 ? ? N1 B DT 11 ? ? 103.36 108.00 -4.64 0.70 N 13 1 "C3'" B DG 12 ? ? "O3'" B DG 12 ? ? P B DC 13 ? ? 127.91 119.70 8.21 1.20 Y 14 1 "C5'" B DC 13 ? ? "C4'" B DC 13 ? ? "C3'" B DC 13 ? ? 125.91 115.70 10.21 1.20 N 15 1 "C5'" B DC 13 ? ? "C4'" B DC 13 ? ? "O4'" B DC 13 ? ? 96.56 109.30 -12.74 1.90 N 16 1 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 103.00 108.00 -5.00 0.70 N 17 1 C6 B DC 13 ? ? N1 B DC 13 ? ? C2 B DC 13 ? ? 122.78 120.30 2.48 0.40 N 18 1 "C3'" B DC 13 ? ? "O3'" B DC 13 ? ? P B DA 14 ? ? 129.50 119.70 9.80 1.20 Y 19 1 "O4'" B DA 14 ? ? "C1'" B DA 14 ? ? N9 B DA 14 ? ? 101.01 108.00 -6.99 0.70 N 20 1 N1 B DA 14 ? ? C2 B DA 14 ? ? N3 B DA 14 ? ? 126.15 129.30 -3.15 0.50 N 21 1 "O4'" B DC 16 ? ? "C4'" B DC 16 ? ? "C3'" B DC 16 ? ? 101.59 104.50 -2.91 0.40 N 22 1 "C1'" B DC 16 ? ? "O4'" B DC 16 ? ? "C4'" B DC 16 ? ? 103.00 110.10 -7.10 1.00 N 23 1 C6 B DC 16 ? ? N1 B DC 16 ? ? C2 B DC 16 ? ? 123.17 120.30 2.87 0.40 N 24 1 "O4'" C DG 17 ? ? "C1'" C DG 17 ? ? N9 C DG 17 ? ? 103.76 108.00 -4.24 0.70 N 25 1 C5 C DG 17 ? ? C6 C DG 17 ? ? N1 C DG 17 ? ? 115.19 111.50 3.69 0.50 N 26 1 "C3'" C DG 17 ? ? "O3'" C DG 17 ? ? P C 5IU 18 ? ? 130.78 119.70 11.08 1.20 Y 27 1 "C3'" C 5IU 18 ? ? "O3'" C 5IU 18 ? ? P C DT 19 ? ? 111.92 119.70 -7.78 1.20 Y 28 1 "O4'" C DT 19 ? ? "C1'" C DT 19 ? ? N1 C DT 19 ? ? 103.48 108.00 -4.52 0.70 N 29 1 "C3'" C DC 21 ? ? "O3'" C DC 21 ? ? P C DA 22 ? ? 156.68 119.70 36.98 1.20 Y 30 1 "C3'" C DA 22 ? ? "O3'" C DA 22 ? ? P C DA 23 ? B 130.51 119.70 10.81 1.20 Y 31 1 P C DA 23 ? A "O5'" C DA 23 ? A "C5'" C DA 23 ? A 108.20 120.90 -12.70 1.60 N 32 1 "O4'" C DA 23 ? A "C1'" C DA 23 ? A N9 C DA 23 ? A 101.76 108.00 -6.24 0.70 N 33 1 "O4'" C DA 23 ? B "C1'" C DA 23 ? B N9 C DA 23 ? B 102.13 108.00 -5.87 0.70 N 34 1 "C3'" C DA 23 ? B "O3'" C DA 23 ? B P C DC 24 ? ? 130.28 119.70 10.58 1.20 Y 35 1 "O4'" C DC 24 ? ? "C4'" C DC 24 ? ? "C3'" C DC 24 ? ? 100.88 104.50 -3.62 0.40 N 36 1 "C1'" C DC 24 ? ? "O4'" C DC 24 ? ? "C4'" C DC 24 ? ? 103.23 110.10 -6.87 1.00 N 37 1 "O4'" D DG 25 ? ? "C1'" D DG 25 ? ? N9 D DG 25 ? ? 103.11 108.00 -4.89 0.70 N 38 1 "C3'" D 5IU 26 ? ? "O3'" D 5IU 26 ? ? P D DT 27 ? ? 130.67 119.70 10.97 1.20 Y 39 1 "C3'" D DT 27 ? ? "O3'" D DT 27 ? ? P D DG 28 ? A 131.73 119.70 12.03 1.20 Y 40 1 P D DG 28 ? B "O5'" D DG 28 ? B "C5'" D DG 28 ? B 135.34 120.90 14.44 1.60 N 41 1 P D DC 29 ? B "O5'" D DC 29 ? B "C5'" D DC 29 ? B 132.12 120.90 11.22 1.60 N 42 1 "O4'" D DC 29 ? ? "C1'" D DC 29 ? ? N1 D DC 29 ? ? 102.21 108.00 -5.79 0.70 N 43 1 "C3'" D DC 29 ? ? "O3'" D DC 29 ? ? P D DA 30 ? ? 134.16 119.70 14.46 1.20 Y 44 1 "O4'" D DA 30 ? ? "C1'" D DA 30 ? ? N9 D DA 30 ? ? 99.74 108.00 -8.26 0.70 N 45 1 N3 E DG 33 ? ? C2 E DG 33 ? ? N2 E DG 33 ? ? 115.17 119.90 -4.73 0.70 N 46 1 "O4'" E DG 36 ? ? "C1'" E DG 36 ? ? N9 E DG 36 ? ? 103.75 108.00 -4.25 0.70 N 47 1 "O5'" E DC 37 ? ? "C5'" E DC 37 ? ? "C4'" E DC 37 ? ? 103.70 109.40 -5.70 0.80 N 48 1 "O4'" E DC 37 ? ? "C4'" E DC 37 ? ? "C3'" E DC 37 ? ? 109.76 106.00 3.76 0.60 N 49 1 "C1'" E DC 37 ? ? "O4'" E DC 37 ? ? "C4'" E DC 37 ? ? 103.82 110.10 -6.28 1.00 N 50 1 "O4'" E DA 38 ? ? "C1'" E DA 38 ? ? N9 E DA 38 ? ? 101.96 108.00 -6.04 0.70 N 51 1 "O4'" E DC 40 ? ? "C4'" E DC 40 ? ? "C3'" E DC 40 ? ? 101.77 104.50 -2.73 0.40 N 52 1 "C1'" E DC 40 ? ? "O4'" E DC 40 ? ? "C4'" E DC 40 ? ? 103.96 110.10 -6.14 1.00 N 53 1 "O5'" F DG 41 ? ? "C5'" F DG 41 ? ? "C4'" F DG 41 ? ? 101.96 109.40 -7.44 0.80 N 54 1 "C3'" F DG 44 ? ? "O3'" F DG 44 ? ? P F DC 45 ? ? 126.99 119.70 7.29 1.20 Y 55 1 "O4'" F DA 46 ? ? "C1'" F DA 46 ? ? N9 F DA 46 ? ? 101.84 108.00 -6.16 0.70 N 56 1 N1 F DA 47 ? ? C2 F DA 47 ? ? N3 F DA 47 ? ? 125.59 129.30 -3.71 0.50 N 57 1 "O4'" F DC 48 ? ? "C4'" F DC 48 ? ? "C3'" F DC 48 ? ? 101.44 104.50 -3.06 0.40 N 58 1 "O4'" G DG 49 ? ? "C1'" G DG 49 ? ? N9 G DG 49 ? ? 103.37 108.00 -4.63 0.70 N 59 1 N9 G DA 54 ? ? "C1'" G DA 54 ? ? "C2'" G DA 54 ? ? 123.56 114.30 9.26 1.40 N 60 1 "O4'" G DA 54 ? ? "C1'" G DA 54 ? ? N9 G DA 54 ? ? 99.38 108.00 -8.62 0.70 N 61 1 "C3'" G DA 54 ? ? "O3'" G DA 54 ? ? P G DA 55 ? ? 128.24 119.70 8.54 1.20 Y 62 1 "O5'" H DG 57 ? ? "C5'" H DG 57 ? ? "C4'" H DG 57 ? ? 103.37 109.40 -6.03 0.80 N 63 1 "O4'" H DT 59 ? ? "C1'" H DT 59 ? ? N1 H DT 59 ? ? 103.19 108.00 -4.81 0.70 N 64 1 "C3'" H DG 60 ? ? "O3'" H DG 60 ? ? P H DC 61 ? ? 132.45 119.70 12.75 1.20 Y 65 1 "O4'" H DA 62 ? ? "C1'" H DA 62 ? ? N9 H DA 62 ? ? 103.32 108.00 -4.68 0.70 N 66 1 "C3'" H DA 62 ? ? "O3'" H DA 62 ? ? P H DA 63 ? ? 129.03 119.70 9.33 1.20 Y 67 1 "O4'" H DA 63 ? ? "C1'" H DA 63 ? ? N9 H DA 63 ? ? 102.52 108.00 -5.48 0.70 N 68 1 "O4'" H DC 64 ? ? "C4'" H DC 64 ? ? "C3'" H DC 64 ? ? 101.62 104.50 -2.88 0.40 N 69 1 "C3'" I 5IU 66 ? ? "O3'" I 5IU 66 ? ? P I DT 67 ? ? 128.53 119.70 8.83 1.20 Y 70 1 "C3'" I DT 67 ? ? "O3'" I DT 67 ? ? P I DG 68 ? ? 128.34 119.70 8.64 1.20 Y 71 1 "O4'" I DC 69 ? ? "C1'" I DC 69 ? ? "C2'" I DC 69 ? ? 99.46 105.90 -6.44 0.80 N 72 1 "C3'" I DC 69 ? ? "O3'" I DC 69 ? ? P I DA 70 ? ? 129.92 119.70 10.22 1.20 Y 73 1 "O4'" I DA 70 ? ? "C1'" I DA 70 ? ? N9 I DA 70 ? ? 102.63 108.00 -5.37 0.70 N 74 1 "O4'" I DC 72 ? ? "C4'" I DC 72 ? ? "C3'" I DC 72 ? ? 100.72 104.50 -3.78 0.40 N 75 1 "O5'" J DT 75 ? ? "C5'" J DT 75 ? ? "C4'" J DT 75 ? ? 102.94 109.40 -6.46 0.80 N 76 1 "C3'" J DG 76 ? ? "O3'" J DG 76 ? ? P J DC 77 ? ? 130.05 119.70 10.35 1.20 Y 77 1 "C3'" J DC 77 ? ? "O3'" J DC 77 ? ? P J DA 78 ? ? 133.83 119.70 14.13 1.20 Y 78 1 P J DA 79 ? ? "O5'" J DA 79 ? ? "C5'" J DA 79 ? ? 104.15 120.90 -16.75 1.60 N 79 1 "O4'" J DA 79 ? ? "C1'" J DA 79 ? ? N9 J DA 79 ? ? 103.12 108.00 -4.88 0.70 N # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A 5IU 2 A 5IU 2 ? DU "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" 2 B 5IU 2 B 5IU 10 ? DU "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" 3 C 5IU 2 C 5IU 18 ? DU "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" 4 D 5IU 2 D 5IU 26 ? DU "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" 5 E 5IU 2 E 5IU 34 ? DU "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" 6 F 5IU 2 F 5IU 42 ? DU "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" 7 G 5IU 2 G 5IU 50 ? DU "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" 8 H 5IU 2 H 5IU 58 ? DU "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" 9 I 5IU 2 I 5IU 66 ? DU "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" 10 J 5IU 2 J 5IU 74 ? DU "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 D HOH 342 ? S HOH . 2 1 E HOH 281 ? T HOH . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5IU N1 N N N 1 5IU C2 C N N 2 5IU N3 N N N 3 5IU C4 C N N 4 5IU C5 C N N 5 5IU C6 C N N 6 5IU O2 O N N 7 5IU O4 O N N 8 5IU I5 I N N 9 5IU "C1'" C N R 10 5IU "C2'" C N N 11 5IU "C3'" C N S 12 5IU "C4'" C N R 13 5IU "O3'" O N N 14 5IU "O4'" O N N 15 5IU "C5'" C N N 16 5IU "O5'" O N N 17 5IU P P N N 18 5IU OP1 O N N 19 5IU OP2 O N N 20 5IU OP3 O N N 21 5IU HN3 H N N 22 5IU H6 H N N 23 5IU "H1'" H N N 24 5IU "H2'" H N N 25 5IU "H2''" H N N 26 5IU "H3'" H N N 27 5IU "H4'" H N N 28 5IU "HO3'" H N N 29 5IU "H5'" H N N 30 5IU "H5''" H N N 31 5IU HOP2 H N N 32 5IU HOP3 H N N 33 DA OP3 O N N 34 DA P P N N 35 DA OP1 O N N 36 DA OP2 O N N 37 DA "O5'" O N N 38 DA "C5'" C N N 39 DA "C4'" C N R 40 DA "O4'" O N N 41 DA "C3'" C N S 42 DA "O3'" O N N 43 DA "C2'" C N N 44 DA "C1'" C N R 45 DA N9 N Y N 46 DA C8 C Y N 47 DA N7 N Y N 48 DA C5 C Y N 49 DA C6 C Y N 50 DA N6 N N N 51 DA N1 N Y N 52 DA C2 C Y N 53 DA N3 N Y N 54 DA C4 C Y N 55 DA HOP3 H N N 56 DA HOP2 H N N 57 DA "H5'" H N N 58 DA "H5''" H N N 59 DA "H4'" H N N 60 DA "H3'" H N N 61 DA "HO3'" H N N 62 DA "H2'" H N N 63 DA "H2''" H N N 64 DA "H1'" H N N 65 DA H8 H N N 66 DA H61 H N N 67 DA H62 H N N 68 DA H2 H N N 69 DC OP3 O N N 70 DC P P N N 71 DC OP1 O N N 72 DC OP2 O N N 73 DC "O5'" O N N 74 DC "C5'" C N N 75 DC "C4'" C N R 76 DC "O4'" O N N 77 DC "C3'" C N S 78 DC "O3'" O N N 79 DC "C2'" C N N 80 DC "C1'" C N R 81 DC N1 N N N 82 DC C2 C N N 83 DC O2 O N N 84 DC N3 N N N 85 DC C4 C N N 86 DC N4 N N N 87 DC C5 C N N 88 DC C6 C N N 89 DC HOP3 H N N 90 DC HOP2 H N N 91 DC "H5'" H N N 92 DC "H5''" H N N 93 DC "H4'" H N N 94 DC "H3'" H N N 95 DC "HO3'" H N N 96 DC "H2'" H N N 97 DC "H2''" H N N 98 DC "H1'" H N N 99 DC H41 H N N 100 DC H42 H N N 101 DC H5 H N N 102 DC H6 H N N 103 DG OP3 O N N 104 DG P P N N 105 DG OP1 O N N 106 DG OP2 O N N 107 DG "O5'" O N N 108 DG "C5'" C N N 109 DG "C4'" C N R 110 DG "O4'" O N N 111 DG "C3'" C N S 112 DG "O3'" O N N 113 DG "C2'" C N N 114 DG "C1'" C N R 115 DG N9 N Y N 116 DG C8 C Y N 117 DG N7 N Y N 118 DG C5 C Y N 119 DG C6 C N N 120 DG O6 O N N 121 DG N1 N N N 122 DG C2 C N N 123 DG N2 N N N 124 DG N3 N N N 125 DG C4 C Y N 126 DG HOP3 H N N 127 DG HOP2 H N N 128 DG "H5'" H N N 129 DG "H5''" H N N 130 DG "H4'" H N N 131 DG "H3'" H N N 132 DG "HO3'" H N N 133 DG "H2'" H N N 134 DG "H2''" H N N 135 DG "H1'" H N N 136 DG H8 H N N 137 DG H1 H N N 138 DG H21 H N N 139 DG H22 H N N 140 DT OP3 O N N 141 DT P P N N 142 DT OP1 O N N 143 DT OP2 O N N 144 DT "O5'" O N N 145 DT "C5'" C N N 146 DT "C4'" C N R 147 DT "O4'" O N N 148 DT "C3'" C N S 149 DT "O3'" O N N 150 DT "C2'" C N N 151 DT "C1'" C N R 152 DT N1 N N N 153 DT C2 C N N 154 DT O2 O N N 155 DT N3 N N N 156 DT C4 C N N 157 DT O4 O N N 158 DT C5 C N N 159 DT C7 C N N 160 DT C6 C N N 161 DT HOP3 H N N 162 DT HOP2 H N N 163 DT "H5'" H N N 164 DT "H5''" H N N 165 DT "H4'" H N N 166 DT "H3'" H N N 167 DT "HO3'" H N N 168 DT "H2'" H N N 169 DT "H2''" H N N 170 DT "H1'" H N N 171 DT H3 H N N 172 DT H71 H N N 173 DT H72 H N N 174 DT H73 H N N 175 DT H6 H N N 176 HOH O O N N 177 HOH H1 H N N 178 HOH H2 H N N 179 RHM N1 N N N 180 RHM N12 N N N 181 RHM C2 C N N 182 RHM C11 C N N 183 RHM C10 C N R 184 RHM C3 C N R 185 RHM C9 C N N 186 RHM C4 C N N 187 RHM N5 N N N 188 RHM C6 C N N 189 RHM C7 C N N 190 RHM N13 N N N 191 RHM RH RH N N 192 RHM C16 C Y N 193 RHM C17 C Y N 194 RHM C19 C Y N 195 RHM C20 C Y N 196 RHM C24 C Y N 197 RHM C25 C Y N 198 RHM C27 C Y N 199 RHM C18 C Y N 200 RHM C28 C Y N 201 RHM C26 C Y N 202 RHM C21 C Y N 203 RHM C23 C Y N 204 RHM C29 C Y N 205 RHM C22 C Y N 206 RHM N8 N N N 207 RHM N14 N N N 208 RHM HN1 H N N 209 RHM H12 H N N 210 RHM H21 H N N 211 RHM H22 H N N 212 RHM H23 H N N 213 RHM H111 H N N 214 RHM H112 H N N 215 RHM H113 H N N 216 RHM H10 H N N 217 RHM H3 H N N 218 RHM H91 H N N 219 RHM H92 H N N 220 RHM H41 H N N 221 RHM H42 H N N 222 RHM HN5 H N N 223 RHM H61 H N N 224 RHM H62 H N N 225 RHM H71 H N N 226 RHM H72 H N N 227 RHM H16 H N N 228 RHM H17 H N N 229 RHM H19 H N N 230 RHM H27 H N N 231 RHM H18 H N N 232 RHM H28 H N N 233 RHM H26 H N N 234 RHM H29 H N N 235 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5IU N1 C2 sing N N 1 5IU N1 C6 sing N N 2 5IU N1 "C1'" sing N N 3 5IU C2 N3 sing N N 4 5IU C2 O2 doub N N 5 5IU N3 C4 sing N N 6 5IU N3 HN3 sing N N 7 5IU C4 C5 sing N N 8 5IU C4 O4 doub N N 9 5IU C5 C6 doub N N 10 5IU C5 I5 sing N N 11 5IU C6 H6 sing N N 12 5IU "C1'" "C2'" sing N N 13 5IU "C1'" "O4'" sing N N 14 5IU "C1'" "H1'" sing N N 15 5IU "C2'" "C3'" sing N N 16 5IU "C2'" "H2'" sing N N 17 5IU "C2'" "H2''" sing N N 18 5IU "C3'" "C4'" sing N N 19 5IU "C3'" "O3'" sing N N 20 5IU "C3'" "H3'" sing N N 21 5IU "C4'" "O4'" sing N N 22 5IU "C4'" "C5'" sing N N 23 5IU "C4'" "H4'" sing N N 24 5IU "O3'" "HO3'" sing N N 25 5IU "C5'" "O5'" sing N N 26 5IU "C5'" "H5'" sing N N 27 5IU "C5'" "H5''" sing N N 28 5IU "O5'" P sing N N 29 5IU P OP1 doub N N 30 5IU P OP2 sing N N 31 5IU P OP3 sing N N 32 5IU OP2 HOP2 sing N N 33 5IU OP3 HOP3 sing N N 34 DA OP3 P sing N N 35 DA OP3 HOP3 sing N N 36 DA P OP1 doub N N 37 DA P OP2 sing N N 38 DA P "O5'" sing N N 39 DA OP2 HOP2 sing N N 40 DA "O5'" "C5'" sing N N 41 DA "C5'" "C4'" sing N N 42 DA "C5'" "H5'" sing N N 43 DA "C5'" "H5''" sing N N 44 DA "C4'" "O4'" sing N N 45 DA "C4'" "C3'" sing N N 46 DA "C4'" "H4'" sing N N 47 DA "O4'" "C1'" sing N N 48 DA "C3'" "O3'" sing N N 49 DA "C3'" "C2'" sing N N 50 DA "C3'" "H3'" sing N N 51 DA "O3'" "HO3'" sing N N 52 DA "C2'" "C1'" sing N N 53 DA "C2'" "H2'" sing N N 54 DA "C2'" "H2''" sing N N 55 DA "C1'" N9 sing N N 56 DA "C1'" "H1'" sing N N 57 DA N9 C8 sing Y N 58 DA N9 C4 sing Y N 59 DA C8 N7 doub Y N 60 DA C8 H8 sing N N 61 DA N7 C5 sing Y N 62 DA C5 C6 sing Y N 63 DA C5 C4 doub Y N 64 DA C6 N6 sing N N 65 DA C6 N1 doub Y N 66 DA N6 H61 sing N N 67 DA N6 H62 sing N N 68 DA N1 C2 sing Y N 69 DA C2 N3 doub Y N 70 DA C2 H2 sing N N 71 DA N3 C4 sing Y N 72 DC OP3 P sing N N 73 DC OP3 HOP3 sing N N 74 DC P OP1 doub N N 75 DC P OP2 sing N N 76 DC P "O5'" sing N N 77 DC OP2 HOP2 sing N N 78 DC "O5'" "C5'" sing N N 79 DC "C5'" "C4'" sing N N 80 DC "C5'" "H5'" sing N N 81 DC "C5'" "H5''" sing N N 82 DC "C4'" "O4'" sing N N 83 DC "C4'" "C3'" sing N N 84 DC "C4'" "H4'" sing N N 85 DC "O4'" "C1'" sing N N 86 DC "C3'" "O3'" sing N N 87 DC "C3'" "C2'" sing N N 88 DC "C3'" "H3'" sing N N 89 DC "O3'" "HO3'" sing N N 90 DC "C2'" "C1'" sing N N 91 DC "C2'" "H2'" sing N N 92 DC "C2'" "H2''" sing N N 93 DC "C1'" N1 sing N N 94 DC "C1'" "H1'" sing N N 95 DC N1 C2 sing N N 96 DC N1 C6 sing N N 97 DC C2 O2 doub N N 98 DC C2 N3 sing N N 99 DC N3 C4 doub N N 100 DC C4 N4 sing N N 101 DC C4 C5 sing N N 102 DC N4 H41 sing N N 103 DC N4 H42 sing N N 104 DC C5 C6 doub N N 105 DC C5 H5 sing N N 106 DC C6 H6 sing N N 107 DG OP3 P sing N N 108 DG OP3 HOP3 sing N N 109 DG P OP1 doub N N 110 DG P OP2 sing N N 111 DG P "O5'" sing N N 112 DG OP2 HOP2 sing N N 113 DG "O5'" "C5'" sing N N 114 DG "C5'" "C4'" sing N N 115 DG "C5'" "H5'" sing N N 116 DG "C5'" "H5''" sing N N 117 DG "C4'" "O4'" sing N N 118 DG "C4'" "C3'" sing N N 119 DG "C4'" "H4'" sing N N 120 DG "O4'" "C1'" sing N N 121 DG "C3'" "O3'" sing N N 122 DG "C3'" "C2'" sing N N 123 DG "C3'" "H3'" sing N N 124 DG "O3'" "HO3'" sing N N 125 DG "C2'" "C1'" sing N N 126 DG "C2'" "H2'" sing N N 127 DG "C2'" "H2''" sing N N 128 DG "C1'" N9 sing N N 129 DG "C1'" "H1'" sing N N 130 DG N9 C8 sing Y N 131 DG N9 C4 sing Y N 132 DG C8 N7 doub Y N 133 DG C8 H8 sing N N 134 DG N7 C5 sing Y N 135 DG C5 C6 sing N N 136 DG C5 C4 doub Y N 137 DG C6 O6 doub N N 138 DG C6 N1 sing N N 139 DG N1 C2 sing N N 140 DG N1 H1 sing N N 141 DG C2 N2 sing N N 142 DG C2 N3 doub N N 143 DG N2 H21 sing N N 144 DG N2 H22 sing N N 145 DG N3 C4 sing N N 146 DT OP3 P sing N N 147 DT OP3 HOP3 sing N N 148 DT P OP1 doub N N 149 DT P OP2 sing N N 150 DT P "O5'" sing N N 151 DT OP2 HOP2 sing N N 152 DT "O5'" "C5'" sing N N 153 DT "C5'" "C4'" sing N N 154 DT "C5'" "H5'" sing N N 155 DT "C5'" "H5''" sing N N 156 DT "C4'" "O4'" sing N N 157 DT "C4'" "C3'" sing N N 158 DT "C4'" "H4'" sing N N 159 DT "O4'" "C1'" sing N N 160 DT "C3'" "O3'" sing N N 161 DT "C3'" "C2'" sing N N 162 DT "C3'" "H3'" sing N N 163 DT "O3'" "HO3'" sing N N 164 DT "C2'" "C1'" sing N N 165 DT "C2'" "H2'" sing N N 166 DT "C2'" "H2''" sing N N 167 DT "C1'" N1 sing N N 168 DT "C1'" "H1'" sing N N 169 DT N1 C2 sing N N 170 DT N1 C6 sing N N 171 DT C2 O2 doub N N 172 DT C2 N3 sing N N 173 DT N3 C4 sing N N 174 DT N3 H3 sing N N 175 DT C4 O4 doub N N 176 DT C4 C5 sing N N 177 DT C5 C7 sing N N 178 DT C5 C6 doub N N 179 DT C7 H71 sing N N 180 DT C7 H72 sing N N 181 DT C7 H73 sing N N 182 DT C6 H6 sing N N 183 HOH O H1 sing N N 184 HOH O H2 sing N N 185 RHM N1 C3 sing N N 186 RHM N1 RH sing N N 187 RHM N1 HN1 sing N N 188 RHM N12 C10 sing N N 189 RHM N12 RH sing N N 190 RHM N12 H12 sing N N 191 RHM C2 C3 sing N N 192 RHM C2 H21 sing N N 193 RHM C2 H22 sing N N 194 RHM C2 H23 sing N N 195 RHM C11 C10 sing N N 196 RHM C11 H111 sing N N 197 RHM C11 H112 sing N N 198 RHM C11 H113 sing N N 199 RHM C10 C9 sing N N 200 RHM C10 H10 sing N N 201 RHM C3 C4 sing N N 202 RHM C3 H3 sing N N 203 RHM C9 N8 sing N N 204 RHM C9 H91 sing N N 205 RHM C9 H92 sing N N 206 RHM C4 N5 sing N N 207 RHM C4 H41 sing N N 208 RHM C4 H42 sing N N 209 RHM N5 C6 sing N N 210 RHM N5 HN5 sing N N 211 RHM C6 C7 sing N N 212 RHM C6 H61 sing N N 213 RHM C6 H62 sing N N 214 RHM C7 N8 sing N N 215 RHM C7 H71 sing N N 216 RHM C7 H72 sing N N 217 RHM N13 RH sing N N 218 RHM N13 C24 doub N N 219 RHM RH N8 sing N N 220 RHM RH N14 sing N N 221 RHM C16 C17 doub Y N 222 RHM C16 C21 sing Y N 223 RHM C16 H16 sing N N 224 RHM C17 C18 sing Y N 225 RHM C17 H17 sing N N 226 RHM C19 C20 sing Y N 227 RHM C19 C18 doub Y N 228 RHM C19 H19 sing N N 229 RHM C20 C21 doub Y N 230 RHM C20 C22 sing Y N 231 RHM C24 C25 sing Y N 232 RHM C24 C23 sing Y N 233 RHM C25 C21 sing Y N 234 RHM C25 N14 doub N N 235 RHM C27 C28 sing Y N 236 RHM C27 C26 doub Y N 237 RHM C27 H27 sing N N 238 RHM C18 H18 sing N N 239 RHM C28 C29 doub Y N 240 RHM C28 H28 sing N N 241 RHM C26 C22 sing Y N 242 RHM C26 H26 sing N N 243 RHM C23 C29 sing Y N 244 RHM C23 C22 doub Y N 245 RHM C29 H29 sing N N 246 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 454D 'double helix' 454D 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 8 1_555 -0.195 -0.049 0.122 4.413 -7.536 2.562 1 A_DG1:DC16_B A 1 ? B 16 ? 19 1 1 A 5IU 2 1_555 B DA 7 1_555 0.015 -0.110 0.093 1.590 -13.086 -0.504 2 A_5IU2:DA15_B A 2 ? B 15 ? 20 1 1 A DT 3 1_555 B DA 6 1_555 0.036 -0.118 0.040 5.026 -7.943 1.896 3 A_DT3:DA14_B A 3 ? B 14 ? 20 1 1 A DG 4 1_555 B DC 5 1_555 -0.241 -0.126 0.368 10.050 -6.827 -0.350 4 A_DG4:DC13_B A 4 ? B 13 ? 19 1 1 A DC 5 1_555 B DG 4 1_555 0.251 -0.140 0.411 -12.237 -2.981 -2.324 5 A_DC5:DG12_B A 5 ? B 12 ? 19 1 1 A DA 6 1_555 B DT 3 1_555 0.038 -0.060 0.138 -4.689 -6.174 2.155 6 A_DA6:DT11_B A 6 ? B 11 ? 20 1 1 A DA 7 1_555 B 5IU 2 1_555 -0.044 -0.045 0.203 -1.284 -11.677 4.222 7 A_DA7:5IU10_B A 7 ? B 10 ? 20 1 1 A DC 8 1_555 B DG 1 1_555 0.162 -0.099 0.079 -0.745 -5.687 -0.306 8 A_DC8:DG9_B A 8 ? B 9 ? 19 1 1 C DG 1 1_555 D DC 8 1_555 -0.285 -0.092 -0.048 -5.833 -5.725 -2.654 9 C_DG17:DC32_D C 17 ? D 32 ? 19 1 1 C 5IU 2 1_555 D DA 7 1_555 0.223 -0.003 0.342 -3.852 -9.782 1.530 10 C_5IU18:DA31_D C 18 ? D 31 ? 20 1 1 C DT 3 1_555 D DA 6 1_555 0.402 -0.056 -0.003 4.161 -6.278 3.874 11 C_DT19:DA30_D C 19 ? D 30 ? 20 1 1 C DG 4 1_555 D DC 5 1_555 -0.403 0.090 0.426 18.489 -0.905 1.511 12 C_DG20:DC29_D C 20 ? D 29 ? 19 1 1 C DC 5 1_555 D DG 4 1_555 0.335 -0.324 0.461 -13.605 -1.692 2.277 13 C_DC21:DG28_D C 21 ? D 28 ? 19 1 1 C DA 6 1_555 D DT 3 1_555 -0.118 -0.104 0.223 -3.822 -4.023 -5.173 14 C_DA22:DT27_D C 22 ? D 27 ? 20 1 1 C DA 7 1_555 D 5IU 2 1_555 -0.928 -0.560 0.365 1.571 -14.400 -13.144 15 C_DA23:5IU26_D C 23 ? D 26 ? 20 1 1 C DC 8 1_555 D DG 1 1_555 0.292 -0.026 0.122 5.120 -2.003 -2.730 16 C_DC24:DG25_D C 24 ? D 25 ? 19 1 1 I DG 1 1_555 J DC 8 1_555 -0.282 -0.226 0.390 1.669 -8.557 1.078 17 I_DG65:DC80_J I 65 ? J 80 ? 19 1 1 I 5IU 2 1_555 J DA 7 1_555 0.378 -0.033 0.417 0.168 -13.323 -2.007 18 I_5IU66:DA79_J I 66 ? J 79 ? 20 1 1 I DT 3 1_555 J DA 6 1_555 0.235 0.354 0.050 8.387 -1.143 -10.863 19 I_DT67:DA78_J I 67 ? J 78 ? 20 1 1 I DG 4 1_555 J DC 5 1_555 0.121 -0.301 0.466 17.441 -0.710 -3.630 20 I_DG68:DC77_J I 68 ? J 77 ? 19 1 1 I DC 5 1_555 J DG 4 1_555 0.007 -0.135 0.445 -12.126 -2.128 0.570 21 I_DC69:DG76_J I 69 ? J 76 ? 19 1 1 I DA 6 1_555 J DT 3 1_555 0.142 -0.201 0.143 -1.374 -2.857 4.304 22 I_DA70:DT75_J I 70 ? J 75 ? 20 1 1 I DA 7 1_555 J 5IU 2 1_555 -0.029 -0.162 0.156 3.637 -12.134 -1.255 23 I_DA71:5IU74_J I 71 ? J 74 ? 20 1 1 I DC 8 1_555 J DG 1 1_555 0.331 -0.096 0.109 2.744 -12.094 1.997 24 I_DC72:DG73_J I 72 ? J 73 ? 19 1 1 E DG 1 1_555 F DC 8 1_555 -0.327 -0.144 0.004 1.335 -9.614 0.994 25 E_DG33:DC48_F E 33 ? F 48 ? 19 1 1 E 5IU 2 1_555 F DA 7 1_555 0.018 -0.135 0.152 -1.266 -12.557 0.371 26 E_5IU34:DA47_F E 34 ? F 47 ? 20 1 1 E DT 3 1_555 F DA 6 1_555 -0.057 -0.100 -0.029 6.333 -7.692 0.660 27 E_DT35:DA46_F E 35 ? F 46 ? 20 1 1 E DG 4 1_555 F DC 5 1_555 -0.163 -0.173 0.446 12.599 -6.132 -2.199 28 E_DG36:DC45_F E 36 ? F 45 ? 19 1 1 E DC 5 1_555 F DG 4 1_555 0.182 -0.171 0.453 -11.855 -6.340 -2.544 29 E_DC37:DG44_F E 37 ? F 44 ? 19 1 1 E DA 6 1_555 F DT 3 1_555 0.030 -0.120 0.062 -6.433 -10.010 2.454 30 E_DA38:DT43_F E 38 ? F 43 ? 20 1 1 E DA 7 1_555 F 5IU 2 1_555 0.042 -0.095 0.222 -1.043 -11.843 0.487 31 E_DA39:5IU42_F E 39 ? F 42 ? 20 1 1 E DC 8 1_555 F DG 1 1_555 0.242 -0.045 0.104 0.104 -3.901 1.202 32 E_DC40:DG41_F E 40 ? F 41 ? 19 1 1 H DG 1 1_555 G DC 8 1_555 -0.200 -0.062 0.167 2.942 -4.796 -0.978 33 H_DG57:DC56_G H 57 ? G 56 ? 19 1 1 H 5IU 2 1_555 G DA 7 1_555 0.022 -0.078 0.140 4.098 -12.652 0.032 34 H_5IU58:DA55_G H 58 ? G 55 ? 20 1 1 H DT 3 1_555 G DA 6 1_555 -0.015 -0.039 0.039 9.309 -7.636 0.731 35 H_DT59:DA54_G H 59 ? G 54 ? 20 1 1 H DG 4 1_555 G DC 5 1_555 -0.115 -0.158 0.582 15.709 -5.062 -2.290 36 H_DG60:DC53_G H 60 ? G 53 ? 19 1 1 H DC 5 1_555 G DG 4 1_555 0.066 -0.140 0.357 -11.355 -7.331 -2.484 37 H_DC61:DG52_G H 61 ? G 52 ? 19 1 1 H DA 6 1_555 G DT 3 1_555 -0.080 -0.150 0.184 -4.759 -8.852 1.798 38 H_DA62:DT51_G H 62 ? G 51 ? 20 1 1 H DA 7 1_555 G 5IU 2 1_555 -0.112 -0.090 0.127 -3.137 -13.144 4.477 39 H_DA63:5IU50_G H 63 ? G 50 ? 20 1 1 H DC 8 1_555 G DG 1 1_555 0.481 -0.141 -0.041 0.740 -9.340 3.420 40 H_DC64:DG49_G H 64 ? G 49 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 8 1_555 A 5IU 2 1_555 B DA 7 1_555 -0.779 -0.779 3.357 1.027 -1.398 31.515 -1.166 1.628 3.361 -2.571 -1.889 31.562 1 AA_DG15IU2:DA15DC16_BB A 1 ? B 16 ? A 2 ? B 15 ? 1 A 5IU 2 1_555 B DA 7 1_555 A DT 3 1_555 B DA 6 1_555 -0.076 -0.112 3.214 1.633 4.228 30.822 -0.999 0.446 3.163 7.902 -3.051 31.145 2 AA_5IU2DT3:DA14DA15_BB A 2 ? B 15 ? A 3 ? B 14 ? 1 A DT 3 1_555 B DA 6 1_555 A DG 4 1_555 B DC 5 1_555 0.007 2.621 3.175 0.935 -10.816 46.399 4.017 0.058 2.538 -13.511 -1.168 47.584 3 AA_DT3DG4:DC13DA14_BB A 3 ? B 14 ? A 4 ? B 13 ? 1 A DG 4 1_555 B DC 5 1_555 A DC 5 1_555 B DG 4 1_555 0.152 1.549 7.251 -1.134 -1.780 23.889 4.995 -1.172 7.103 -4.291 2.733 23.981 4 AA_DG4DC5:DG12DC13_BB A 4 ? B 13 ? A 5 ? B 12 ? 1 A DC 5 1_555 B DG 4 1_555 A DA 6 1_555 B DT 3 1_555 -0.063 2.521 3.157 -1.088 -11.622 46.981 3.873 0.003 2.504 -14.321 1.341 48.330 5 AA_DC5DA6:DT11DG12_BB A 5 ? B 12 ? A 6 ? B 11 ? 1 A DA 6 1_555 B DT 3 1_555 A DA 7 1_555 B 5IU 2 1_555 0.310 0.307 3.263 -1.835 7.970 29.522 -1.006 -0.954 3.209 15.275 3.517 30.610 6 AA_DA6DA7:5IU10DT11_BB A 6 ? B 11 ? A 7 ? B 10 ? 1 A DA 7 1_555 B 5IU 2 1_555 A DC 8 1_555 B DG 1 1_555 0.421 -0.486 3.298 -0.323 -0.196 32.268 -0.840 -0.815 3.297 -0.353 0.581 32.270 7 AA_DA7DC8:DG95IU10_BB A 7 ? B 10 ? A 8 ? B 9 ? 1 A DC 8 1_555 B DG 1 1_555 C DG 1 1_555 D DC 8 1_555 -0.155 1.086 3.586 0.267 4.337 -31.199 -2.871 -0.232 3.409 -8.016 0.493 -31.493 8 AC_DC8DG17:DC32DG9_DB A 8 ? B 9 ? C 17 ? D 32 ? 1 C DG 1 1_555 D DC 8 1_555 C 5IU 2 1_555 D DA 7 1_555 -0.176 -0.394 3.320 -1.960 -1.494 34.764 -0.427 -0.009 3.338 -2.496 3.276 34.849 9 CC_DG175IU18:DA31DC32_DD C 17 ? D 32 ? C 18 ? D 31 ? 1 C 5IU 2 1_555 D DA 7 1_555 C DT 3 1_555 D DA 6 1_555 0.246 0.421 3.153 3.554 9.173 30.006 -0.912 0.201 3.150 17.147 -6.644 31.542 10 CC_5IU18DT19:DA30DA31_DD C 18 ? D 31 ? C 19 ? D 30 ? 1 C DT 3 1_555 D DA 6 1_555 C DG 4 1_555 D DC 5 1_555 -0.054 2.445 3.076 -0.459 -7.926 39.598 4.321 0.033 2.560 -11.559 0.669 40.355 11 CC_DT19DG20:DC29DA30_DD C 19 ? D 30 ? C 20 ? D 29 ? 1 C DC 5 1_555 D DG 4 1_555 C DA 6 1_555 D DT 3 1_555 -0.090 2.099 3.074 0.086 -9.754 42.657 3.633 0.129 2.557 -13.203 -0.117 43.707 12 CC_DC21DA22:DT27DG28_DD C 21 ? D 28 ? C 22 ? D 27 ? 1 C DA 6 1_555 D DT 3 1_555 C DA 7 1_555 D 5IU 2 1_555 -1.020 0.198 3.183 -3.608 1.863 31.857 0.026 1.203 3.281 3.377 6.540 32.108 13 CC_DA22DA23:5IU26DT27_DD C 22 ? D 27 ? C 23 ? D 26 ? 1 C DA 7 1_555 D 5IU 2 1_555 C DC 8 1_555 D DG 1 1_555 1.342 -0.406 3.262 1.103 1.350 35.251 -0.870 -2.051 3.283 2.228 -1.821 35.293 14 CC_DA23DC24:DG255IU26_DD C 23 ? D 26 ? C 24 ? D 25 ? 1 C DC 8 1_555 D DG 1 1_555 I DG 1 1_555 J DC 8 1_555 -0.001 1.154 3.439 -1.907 5.920 -24.239 -4.443 -0.574 3.065 -13.810 -4.448 -25.013 15 CI_DC24DG65:DC80DG25_JD C 24 ? D 25 ? I 65 ? J 80 ? 1 I DG 1 1_555 J DC 8 1_555 I 5IU 2 1_555 J DA 7 1_555 -0.582 -0.440 3.317 0.891 -1.567 33.874 -0.498 1.143 3.318 -2.688 -1.528 33.921 16 II_DG655IU66:DA79DC80_JJ I 65 ? J 80 ? I 66 ? J 79 ? 1 I 5IU 2 1_555 J DA 7 1_555 I DT 3 1_555 J DA 6 1_555 0.176 0.268 3.188 4.244 2.507 36.901 0.094 0.277 3.198 3.939 -6.668 37.217 17 II_5IU66DT67:DA78DA79_JJ I 66 ? J 79 ? I 67 ? J 78 ? 1 I DT 3 1_555 J DA 6 1_555 I DG 4 1_555 J DC 5 1_555 0.822 2.752 3.058 4.069 -9.909 44.112 4.326 -0.756 2.479 -12.968 -5.324 45.331 18 II_DT67DG68:DC77DA78_JJ I 67 ? J 78 ? I 68 ? J 77 ? 1 I DG 4 1_555 J DC 5 1_555 I DC 5 1_555 J DG 4 1_555 0.440 1.088 7.370 4.404 -0.977 17.993 4.574 4.039 7.199 -3.062 -13.803 18.545 19 II_DG68DC69:DG76DC77_JJ I 68 ? J 77 ? I 69 ? J 76 ? 1 I DC 5 1_555 J DG 4 1_555 I DA 6 1_555 J DT 3 1_555 0.459 2.229 3.143 1.846 -10.250 49.376 3.276 -0.421 2.675 -12.115 -2.182 50.395 20 II_DC69DA70:DT75DG76_JJ I 69 ? J 76 ? I 70 ? J 75 ? 1 I DA 6 1_555 J DT 3 1_555 I DA 7 1_555 J 5IU 2 1_555 -0.678 0.071 3.158 -1.768 3.683 29.604 -0.606 0.958 3.178 7.165 3.440 29.879 21 II_DA70DA71:5IU74DT75_JJ I 70 ? J 75 ? I 71 ? J 74 ? 1 I DA 7 1_555 J 5IU 2 1_555 I DC 8 1_555 J DG 1 1_555 0.587 -0.787 3.320 0.203 0.212 33.262 -1.411 -0.991 3.318 0.370 -0.354 33.263 22 II_DA71DC72:DG735IU74_JJ I 71 ? J 74 ? I 72 ? J 73 ? 1 E DG 1 1_555 F DC 8 1_555 E 5IU 2 1_555 F DA 7 1_555 -0.393 -0.726 3.355 -0.305 -1.064 31.405 -1.135 0.666 3.380 -1.965 0.563 31.424 23 EE_DG335IU34:DA47DC48_FF E 33 ? F 48 ? E 34 ? F 47 ? 1 E 5IU 2 1_555 F DA 7 1_555 E DT 3 1_555 F DA 6 1_555 -0.142 -0.305 3.131 2.410 3.678 28.145 -1.418 0.812 3.045 7.504 -4.917 28.479 24 EE_5IU34DT35:DA46DA47_FF E 34 ? F 47 ? E 35 ? F 46 ? 1 E DT 3 1_555 F DA 6 1_555 E DG 4 1_555 F DC 5 1_555 0.064 2.723 3.166 0.282 -10.694 48.851 3.914 -0.058 2.555 -12.754 -0.336 49.939 25 EE_DT35DG36:DC45DA46_FF E 35 ? F 46 ? E 36 ? F 45 ? 1 E DG 4 1_555 F DC 5 1_555 E DC 5 1_555 F DG 4 1_555 0.124 1.512 7.304 -0.956 -1.504 24.380 4.610 -0.953 7.189 -3.554 2.260 24.444 26 EE_DG36DC37:DG44DC45_FF E 36 ? F 45 ? E 37 ? F 44 ? 1 E DC 5 1_555 F DG 4 1_555 E DA 6 1_555 F DT 3 1_555 -0.019 2.829 3.138 0.484 -10.818 48.359 4.078 0.054 2.489 -13.016 -0.582 49.486 27 EE_DC37DA38:DT43DG44_FF E 37 ? F 44 ? E 38 ? F 43 ? 1 E DA 6 1_555 F DT 3 1_555 E DA 7 1_555 F 5IU 2 1_555 0.207 0.281 3.189 -2.329 5.076 30.767 -0.421 -0.816 3.169 9.469 4.346 31.258 28 EE_DA38DA39:5IU42DT43_FF E 38 ? F 43 ? E 39 ? F 42 ? 1 E DA 7 1_555 F 5IU 2 1_555 E DC 8 1_555 F DG 1 1_555 0.835 -0.553 3.330 -0.053 -3.286 32.925 -0.403 -1.475 3.367 -5.780 0.093 33.084 29 EE_DA39DC40:DG415IU42_FF E 39 ? F 42 ? E 40 ? F 41 ? 1 E DC 8 1_555 F DG 1 1_555 H DG 1 1_555 G DC 8 1_555 0.038 0.764 3.359 -0.587 3.875 -28.922 -2.371 -0.054 3.231 -7.714 -1.168 -29.181 30 EH_DC40DG57:DC56DG41_GF E 40 ? F 41 ? H 57 ? G 56 ? 1 H DG 1 1_555 G DC 8 1_555 H 5IU 2 1_555 G DA 7 1_555 -0.631 -0.619 3.320 0.492 -3.429 31.986 -0.489 1.229 3.357 -6.199 -0.889 32.168 31 HH_DG575IU58:DA55DC56_GG H 57 ? G 56 ? H 58 ? G 55 ? 1 H 5IU 2 1_555 G DA 7 1_555 H DT 3 1_555 G DA 6 1_555 -0.078 0.061 3.186 1.024 4.052 31.631 -0.607 0.323 3.165 7.393 -1.868 31.899 32 HH_5IU58DT59:DA54DA55_GG H 58 ? G 55 ? H 59 ? G 54 ? 1 H DT 3 1_555 G DA 6 1_555 H DG 4 1_555 G DC 5 1_555 0.105 2.572 3.139 0.036 -10.688 46.924 3.896 -0.127 2.530 -13.222 -0.045 48.058 33 HH_DT59DG60:DC53DA54_GG H 59 ? G 54 ? H 60 ? G 53 ? 1 H DG 4 1_555 G DC 5 1_555 H DC 5 1_555 G DG 4 1_555 0.025 1.472 7.294 4.429 -2.184 24.967 4.730 2.757 7.040 -4.990 -10.118 25.443 34 HH_DG60DC61:DG52DC53_GG H 60 ? G 53 ? H 61 ? G 52 ? 1 H DC 5 1_555 G DG 4 1_555 H DA 6 1_555 G DT 3 1_555 0.259 2.634 3.119 -1.048 -11.266 49.297 3.783 -0.368 2.493 -13.304 1.237 50.499 35 HH_DC61DA62:DT51DG52_GG H 61 ? G 52 ? H 62 ? G 51 ? 1 H DA 6 1_555 G DT 3 1_555 H DA 7 1_555 G 5IU 2 1_555 -0.337 0.183 3.257 -1.966 2.592 33.415 -0.108 0.262 3.276 4.494 3.410 33.568 36 HH_DA62DA63:5IU50DT51_GG H 62 ? G 51 ? H 63 ? G 50 ? 1 H DA 7 1_555 G 5IU 2 1_555 H DC 8 1_555 G DG 1 1_555 0.462 -0.428 3.209 0.183 -0.323 33.497 -0.691 -0.772 3.215 -0.560 -0.317 33.499 37 HH_DA63DC64:DG495IU50_GG H 63 ? G 50 ? H 64 ? G 49 ? # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'INITIAL MODEL OBTAINED BY SIRAS WITH 10 IODINE POSITIONS' # _atom_sites.entry_id 454D _atom_sites.fract_transf_matrix[1][1] 0.010555 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000598 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.041701 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010377 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C I N O P RH # loop_