HEADER ISOMERASE 01-SEP-26 45KK TITLE 6-CONFORMATION MODEL OF HEN EGG WHITE LYSOZYME AT 100K COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME C; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 1,4-BETA-N-ACETYLMURAMIDASE C,ALLERGEN GAL D IV; COMPND 5 EC: 3.2.1.17; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 GENE: LYZ; SOURCE 6 EXPRESSION_SYSTEM: GALLUS GALLUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9031 KEYWDS LYSOZYME, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.K.PASSMORE REVDAT 1 30-SEP-26 45KK 0 JRNL AUTH S.K.PASSMORE,J.M.HOLTON,N.A.ZATSEPIN,A.V.MARTIN JRNL TITL OPTIMIZING THE CONNECTIVITY OF PROTEIN CONFORMATIONS TO JRNL TITL 2 UNTANGLE ENSEMBLE REFINEMENT JRNL REF BIORXIV 2026 JRNL REFN ISSN 2692-8205 JRNL DOI 10.64898/2026.09.17.752399 REMARK 0 REMARK 0 THIS ENTRY 45KK REFLECTS AN ALTERNATIVE MODELING OF THE ORIGINAL REMARK 0 DATA IN 5KXK, DETERMINED BY S.RUSSI, A.GONZALEZ, L.R.KENNER, REMARK 0 D.A.KEEDY, J.S.FRASER, H.VAN DEN BEDEM. REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.RUSSI,A.GONZALEZ,L.R.KENNER,D.A.KEEDY,J.S.FRASER, REMARK 1 AUTH 2 H.VAN DEN BEDEM REMARK 1 TITL CONFORMATIONAL VARIATION OF PROTEINS AT ROOM TEMPERATURE IS REMARK 1 TITL 2 NOT DOMINATED BY RADIATION DAMAGE. REMARK 1 REF J.SYNCHROTRON RADIAT. V. 24 73 2017 REMARK 1 REFN ESSN 1600-5775 REMARK 1 PMID 28009548 REMARK 1 DOI 10.1107/S1600577516017343 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 2.0_5793 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 35953 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.052 REMARK 3 R VALUE (WORKING SET) : 0.050 REMARK 3 FREE R VALUE : 0.085 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.560 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.6400 - 2.8900 1.00 2605 153 0.0582 0.0812 REMARK 3 2 2.8900 - 2.2900 1.00 2501 147 0.0530 0.0739 REMARK 3 3 2.2900 - 2.0000 1.00 2453 144 0.0458 0.0832 REMARK 3 4 2.0000 - 1.8200 1.00 2438 144 0.0480 0.0793 REMARK 3 5 1.8200 - 1.6900 1.00 2411 142 0.0496 0.1001 REMARK 3 6 1.6900 - 1.5900 1.00 2428 142 0.0478 0.0947 REMARK 3 7 1.5900 - 1.5100 1.00 2408 143 0.0460 0.0875 REMARK 3 8 1.5100 - 1.4400 1.00 2399 140 0.0422 0.0879 REMARK 3 9 1.4400 - 1.3900 1.00 2400 142 0.0426 0.0965 REMARK 3 10 1.3900 - 1.3400 1.00 2378 140 0.0453 0.0922 REMARK 3 11 1.3400 - 1.3000 1.00 2399 141 0.0436 0.0888 REMARK 3 12 1.3000 - 1.2600 1.00 2380 140 0.0459 0.1016 REMARK 3 13 1.2600 - 1.2300 1.00 2381 141 0.0473 0.1037 REMARK 3 14 1.2300 - 1.2000 0.99 2374 139 0.0507 0.0893 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.048 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 5.745 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 9.29 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 8.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 6168 REMARK 3 ANGLE : 1.060 8352 REMARK 3 CHIRALITY : 0.088 864 REMARK 3 PLANARITY : 0.014 1092 REMARK 3 DIHEDRAL : 13.414 2190 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MODEL WAS REFINED OVER LOOPS CONSISTING REMARK 3 OF A SINGLE UNRESTRAINED REFINEMENT MACRO-CYCLE, CONNECTIVITY REMARK 3 OPTIMIZATION (REASSIGNING ALTLOC LABELS), THEN 10+ RESTRAINED REMARK 3 REFINEMENT MACRO-CYCLES. CONFORMATION-AWARE WATER PICKING AND REMARK 3 MANUAL ADJUSTMENTS WERE ALSO PERFORMED IN LATER LOOPS. REMARK 4 REMARK 4 45KK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-SEP-26. REMARK 100 THE DEPOSITION ID IS D_1300078936. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.21549 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35966 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.198 REMARK 200 RESOLUTION RANGE LOW (A) : 38.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.02500 REMARK 200 FOR THE DATA SET : 45.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.09800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: AUTHOR USED THE SF DATA FROM ENTRY 5KXK REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS WERE GROWN BY MIXING EQUAL REMARK 280 VOLUMES OF WELL SOLUTION (1.0 M SODIUM CHLORIDE, 50 MM SODIUM REMARK 280 ACETATE PH 4.5) AND PROTEIN (40-60 MG/ML), VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 18.60250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.64450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.64450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 27.90375 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.64450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.64450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 9.30125 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.64450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.64450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 27.90375 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.64450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.64450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 9.30125 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 18.60250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 438 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 817 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1009 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1416 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1541 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1573 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1668 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1688 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1718 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1751 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1752 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 21 27.36 47.75 REMARK 500 SER A 36 -5.02 -151.83 REMARK 500 GLN A 57 53.76 37.93 REMARK 500 ARG A 68 36.30 -142.86 REMARK 500 ARG A 68 32.47 -142.51 REMARK 500 ARG A 73 -159.87 -104.16 REMARK 500 ASN A 74 65.29 -156.09 REMARK 500 ASN A 74 75.21 -164.99 REMARK 500 LYS A 116 119.22 -38.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1728 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A1729 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH A1730 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH A1731 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A1732 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH A1733 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH A1734 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH A1735 DISTANCE = 6.47 ANGSTROMS REMARK 525 HOH A1736 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH A1737 DISTANCE = 6.68 ANGSTROMS REMARK 525 HOH A1738 DISTANCE = 6.75 ANGSTROMS REMARK 525 HOH A1739 DISTANCE = 7.00 ANGSTROMS REMARK 525 HOH A1740 DISTANCE = 7.10 ANGSTROMS REMARK 525 HOH A1741 DISTANCE = 7.68 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 202 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 411 O REMARK 620 2 HOH A 558 O 81.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 202 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 433 O REMARK 620 2 HOH A1054 O 100.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 203 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 315 O REMARK 620 2 HOH A 400 O 156.8 REMARK 620 3 HOH A 645 O 81.5 77.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 203 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 384 O REMARK 620 2 HOH A 388 O 163.4 REMARK 620 3 HOH A 789 O 83.4 83.4 REMARK 620 4 HOH A 893 O 102.4 92.3 169.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 203 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 450 O REMARK 620 2 HOH A 830 O 82.0 REMARK 620 3 HOH A 902 O 164.7 110.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 203 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 458 O REMARK 620 2 HOH A1262 O 95.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 203 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 694 O REMARK 620 2 HOH A 967 O 96.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 203 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1525 O REMARK 620 2 HOH A1538 O 78.8 REMARK 620 N 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5KXK RELATED DB: PDB REMARK 900 THIS IS A RE-REFINED STRUCTURE DERIVED FROM THE EXPERIMENTAL DATA REMARK 900 OF 5KXK DBREF 45KK A 1 129 UNP P00698 LYSC_CHICK 19 147 SEQRES 1 A 129 LYS VAL PHE GLY ARG CYS GLU LEU ALA ALA ALA MET LYS SEQRES 2 A 129 ARG HIS GLY LEU ASP ASN TYR ARG GLY TYR SER LEU GLY SEQRES 3 A 129 ASN TRP VAL CYS ALA ALA LYS PHE GLU SER ASN PHE ASN SEQRES 4 A 129 THR GLN ALA THR ASN ARG ASN THR ASP GLY SER THR ASP SEQRES 5 A 129 TYR GLY ILE LEU GLN ILE ASN SER ARG TRP TRP CYS ASN SEQRES 6 A 129 ASP GLY ARG THR PRO GLY SER ARG ASN LEU CYS ASN ILE SEQRES 7 A 129 PRO CYS SER ALA LEU LEU SER SER ASP ILE THR ALA SER SEQRES 8 A 129 VAL ASN CYS ALA LYS LYS ILE VAL SER ASP GLY ASN GLY SEQRES 9 A 129 MET ASN ALA TRP VAL ALA TRP ARG ASN ARG CYS LYS GLY SEQRES 10 A 129 THR ASP VAL GLN ALA TRP ILE ARG GLY CYS ARG LEU HET ACT A 201 42 HET NA A 202 6 HET NA A 203 6 HET CL A 204 6 HET CL A 205 6 HET CL A 206 6 HETNAM ACT ACETATE ION HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION FORMUL 2 ACT C2 H3 O2 1- FORMUL 3 NA 2(NA 1+) FORMUL 5 CL 3(CL 1-) FORMUL 8 HOH *1468(H2 O) HELIX 1 AA1 GLY A 4 HIS A 15 1 12 HELIX 2 AA2 ASN A 19 TYR A 23 5 5 HELIX 3 AA3 SER A 24 ASN A 37 1 14 HELIX 4 AA4 PRO A 79 SER A 85 5 7 HELIX 5 AA5 ILE A 88 VAL A 99 1 12 HELIX 6 AA6 ASN A 103 ALA A 107 5 5 HELIX 7 AA7 TRP A 108 CYS A 115 1 8 HELIX 8 AA8 ASP A 119 ARG A 125 5 7 SHEET 1 AA1 3 THR A 43 ARG A 45 0 SHEET 2 AA1 3 THR A 51 TYR A 53 -1 O ASP A 52 N ASN A 44 SHEET 3 AA1 3 ILE A 58 ASN A 59 -1 O ILE A 58 N TYR A 53 SSBOND 1 CYS A 6 CYS A 127 1555 1555 2.03 SSBOND 2 CYS A 30 CYS A 115 1555 1555 2.06 SSBOND 3 CYS A 64 CYS A 80 1555 1555 2.05 SSBOND 4 CYS A 76 CYS A 94 1555 1555 2.03 LINK NA B NA A 202 O BHOH A 325 1555 1555 2.48 LINK NA F NA A 202 O FHOH A 411 1555 1555 2.66 LINK NA E NA A 202 O EHOH A 433 1555 1555 2.78 LINK NA F NA A 202 O FHOH A 558 1555 1555 2.57 LINK NA A NA A 202 O AHOH A 585 1555 1555 2.50 LINK NA C NA A 202 O CHOH A 890 1555 1555 2.51 LINK NA E NA A 202 O EHOH A1054 1555 1555 2.72 LINK NA D NA A 202 O DHOH A1089 1555 1555 2.54 LINK NA E NA A 203 O EHOH A 315 1555 1555 3.02 LINK NA D NA A 203 O DHOH A 384 1555 1555 2.81 LINK NA D NA A 203 O DHOH A 388 1555 1555 2.76 LINK NA E NA A 203 O EHOH A 400 1555 1555 3.13 LINK NA A NA A 203 O AHOH A 450 1555 1555 2.56 LINK NA B NA A 203 O BHOH A 458 1555 1555 2.61 LINK NA E NA A 203 O EHOH A 645 1555 1555 2.99 LINK NA F NA A 203 O FHOH A 694 1555 1555 2.46 LINK NA D NA A 203 O DHOH A 789 1555 1555 2.22 LINK NA A NA A 203 O AHOH A 830 1555 1555 3.04 LINK NA D NA A 203 O DHOH A 893 1555 1555 2.95 LINK NA A NA A 203 O AHOH A 902 1555 1555 2.98 LINK NA F NA A 203 O FHOH A 967 1555 1555 2.64 LINK NA B NA A 203 O BHOH A1262 1555 1555 2.52 LINK NA C NA A 203 O CHOH A1525 1555 3554 2.92 LINK NA C NA A 203 O CHOH A1538 1555 3554 2.73 CRYST1 77.289 77.289 37.205 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012938 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012938 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026878 0.00000 CONECT 57711473 CONECT 57811474 CONECT 57911475 CONECT 58011476 CONECT 58111477 CONECT 58211478 CONECT 280310381 CONECT 280410382 CONECT 280510383 CONECT 280610384 CONECT 280710385 CONECT 280810386 CONECT 5935 7297 CONECT 5936 7298 CONECT 5937 7299 CONECT 5938 7300 CONECT 5939 7301 CONECT 5940 7302 CONECT 6955 8419 CONECT 6956 8420 CONECT 6957 8421 CONECT 6958 8422 CONECT 6959 8423 CONECT 6960 8424 CONECT 7297 5935 CONECT 7298 5936 CONECT 7299 5937 CONECT 7300 5938 CONECT 7301 5939 CONECT 7302 5940 CONECT 8419 6955 CONECT 8420 6956 CONECT 8421 6957 CONECT 8422 6958 CONECT 8423 6959 CONECT 8424 6960 CONECT10381 2803 CONECT10382 2804 CONECT10383 2805 CONECT10384 2806 CONECT10385 2807 CONECT10386 2808 CONECT11473 577 CONECT11474 578 CONECT11475 579 CONECT11476 580 CONECT11477 581 CONECT11478 582 CONECT11768117741178011786 CONECT11769117751178111787 CONECT11770117761178211788 CONECT11771117771178311789 CONECT11772117781178411790 CONECT11773117791178511791 CONECT1177411768 CONECT1177511769 CONECT1177611770 CONECT1177711771 CONECT1177811772 CONECT1177911773 CONECT1178011768 CONECT1178111769 CONECT1178211770 CONECT1178311771 CONECT1178411772 CONECT1178511773 CONECT1178611768117921179811804 CONECT1178711769117931179911805 CONECT1178811770117941180011806 CONECT1178911771117951180111807 CONECT1179011772117961180211808 CONECT1179111773117971180311809 CONECT1179211786 CONECT1179311787 CONECT1179411788 CONECT1179511789 CONECT1179611790 CONECT1179711791 CONECT1179811786 CONECT1179911787 CONECT1180011788 CONECT1180111789 CONECT1180211790 CONECT1180311791 CONECT1180411786 CONECT1180511787 CONECT1180611788 CONECT1180711789 CONECT1180811790 CONECT1180911791 CONECT1181012124 CONECT1181111864 CONECT1181212429 CONECT1181312628 CONECT118141197212593 CONECT118151195012097 CONECT11816119891236912441 CONECT118171199712801 CONECT1181911923119271232812432 CONECT11820118541193912184 CONECT118211223312506 CONECT1185411820 CONECT1186411811 CONECT1192311819 CONECT1192711819 CONECT1193911820 CONECT1195011815 CONECT1197211814 CONECT1198911816 CONECT1199711817 CONECT1209711815 CONECT1212411810 CONECT1218411820 CONECT1223311821 CONECT1232811819 CONECT1236911816 CONECT1242911812 CONECT1243211819 CONECT1244111816 CONECT1250611821 CONECT1259311814 CONECT1262811813 CONECT1280111817 MASTER 380 0 6 8 3 0 0 6 2478 1 123 10 END