data_476D # _entry.id 476D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 476D pdb_0000476d 10.2210/pdb476d/pdb RCSB BD0018 ? ? WWPDB D_1000179251 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-07-19 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_alt_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 23 4 'Structure model' '_pdbx_struct_conn_angle.value' 24 4 'Structure model' '_struct_conn.pdbx_dist_value' 25 4 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 26 4 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 27 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 28 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 29 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 32 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 33 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 34 4 'Structure model' '_struct_conn.ptnr1_symmetry' 35 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 36 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 37 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 39 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 40 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 41 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 42 4 'Structure model' '_struct_conn.ptnr2_symmetry' 43 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 44 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 45 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 476D _pdbx_database_status.recvd_initial_deposition_date 1999-06-25 _pdbx_database_status.deposit_site NDB _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Minasov, G.' 1 'Tereshko, V.' 2 'Egli, M.' 3 # _citation.id primary _citation.title 'Atomic-resolution crystal structures of B-DNA reveal specific influences of divalent metal ions on conformation and packing.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 291 _citation.page_first 83 _citation.page_last 99 _citation.year 1999 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10438608 _citation.pdbx_database_id_DOI 10.1006/jmbi.1999.2934 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Minasov, G.' 1 ? primary 'Tereshko, V.' 2 ? primary 'Egli, M.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'" 3374.210 2 ? ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 6 ? ? ? ? 3 water nat water 18.015 121 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DC)(DG)(DA)(DA)(DT)(DT)(DC)(DG)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can GCGAATTCGCG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DG n 1 4 DA n 1 5 DA n 1 6 DT n 1 7 DT n 1 8 DC n 1 9 DG n 1 10 DC n 1 11 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 2 2 DG G A . n A 1 2 DC 2 3 3 DC C A . n A 1 3 DG 3 4 4 DG G A . n A 1 4 DA 4 5 5 DA A A . n A 1 5 DA 5 6 6 DA A A . n A 1 6 DT 6 7 7 DT T A . n A 1 7 DT 7 8 8 DT T A . n A 1 8 DC 8 9 9 DC C A . n A 1 9 DG 9 10 10 DG G A . n A 1 10 DC 10 11 11 DC C A . n A 1 11 DG 11 12 12 DG G A . n B 1 1 DG 1 14 14 DG G B . n B 1 2 DC 2 15 15 DC C B . n B 1 3 DG 3 16 16 DG G B . n B 1 4 DA 4 17 17 DA A B . n B 1 5 DA 5 18 18 DA A B . n B 1 6 DT 6 19 19 DT T B . n B 1 7 DT 7 20 20 DT T B . n B 1 8 DC 8 21 21 DC C B . n B 1 9 DG 9 22 22 DG G B . n B 1 10 DC 10 23 23 DC C B . n B 1 11 DG 11 24 24 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA 1 112 112 CA CA A . D 2 CA 1 120 120 CA CA A . E 2 CA 1 124 124 CA CA A . F 2 CA 1 101 101 CA CA B . G 2 CA 1 104 104 CA CA B . H 2 CA 1 122 122 CA CA B . I 3 HOH 1 125 124 HOH HOH A . I 3 HOH 2 126 114 HOH HOH A . I 3 HOH 3 127 115 HOH HOH A . I 3 HOH 4 128 117 HOH HOH A . I 3 HOH 5 129 118 HOH HOH A . I 3 HOH 6 130 121 HOH HOH A . I 3 HOH 7 131 127 HOH HOH A . I 3 HOH 8 132 128 HOH HOH A . I 3 HOH 9 133 131 HOH HOH A . I 3 HOH 10 134 133 HOH HOH A . I 3 HOH 11 135 135 HOH HOH A . I 3 HOH 12 136 137 HOH HOH A . I 3 HOH 13 137 140 HOH HOH A . I 3 HOH 14 138 141 HOH HOH A . I 3 HOH 15 139 143 HOH HOH A . I 3 HOH 16 140 144 HOH HOH A . I 3 HOH 17 141 145 HOH HOH A . I 3 HOH 18 142 146 HOH HOH A . I 3 HOH 19 143 147 HOH HOH A . I 3 HOH 20 144 148 HOH HOH A . I 3 HOH 21 145 149 HOH HOH A . I 3 HOH 22 146 150 HOH HOH A . I 3 HOH 23 147 151 HOH HOH A . I 3 HOH 24 148 152 HOH HOH A . I 3 HOH 25 149 154 HOH HOH A . I 3 HOH 26 150 159 HOH HOH A . I 3 HOH 27 151 161 HOH HOH A . I 3 HOH 28 152 165 HOH HOH A . I 3 HOH 29 153 166 HOH HOH A . I 3 HOH 30 154 167 HOH HOH A . I 3 HOH 31 155 168 HOH HOH A . I 3 HOH 32 156 172 HOH HOH A . I 3 HOH 33 157 173 HOH HOH A . I 3 HOH 34 158 174 HOH HOH A . I 3 HOH 35 159 178 HOH HOH A . I 3 HOH 36 160 180 HOH HOH A . I 3 HOH 37 161 183 HOH HOH A . I 3 HOH 38 162 185 HOH HOH A . I 3 HOH 39 163 186 HOH HOH A . I 3 HOH 40 164 187 HOH HOH A . I 3 HOH 41 165 190 HOH HOH A . I 3 HOH 42 166 192 HOH HOH A . I 3 HOH 43 167 196 HOH HOH A . I 3 HOH 44 168 197 HOH HOH A . I 3 HOH 45 169 198 HOH HOH A . I 3 HOH 46 170 200 HOH HOH A . I 3 HOH 47 171 202 HOH HOH A . I 3 HOH 48 172 203 HOH HOH A . I 3 HOH 49 173 205 HOH HOH A . I 3 HOH 50 174 211 HOH HOH A . I 3 HOH 51 175 212 HOH HOH A . I 3 HOH 52 176 213 HOH HOH A . I 3 HOH 53 177 215 HOH HOH A . I 3 HOH 54 178 217 HOH HOH A . I 3 HOH 55 179 218 HOH HOH A . I 3 HOH 56 180 219 HOH HOH A . I 3 HOH 57 181 221 HOH HOH A . I 3 HOH 58 182 223 HOH HOH A . I 3 HOH 59 183 225 HOH HOH A . I 3 HOH 60 184 226 HOH HOH A . I 3 HOH 61 185 229 HOH HOH A . J 3 HOH 1 102 102 HOH HOH B . J 3 HOH 2 103 103 HOH HOH B . J 3 HOH 3 105 105 HOH HOH B . J 3 HOH 4 106 106 HOH HOH B . J 3 HOH 5 107 107 HOH HOH B . J 3 HOH 6 108 108 HOH HOH B . J 3 HOH 7 109 109 HOH HOH B . J 3 HOH 8 110 110 HOH HOH B . J 3 HOH 9 111 111 HOH HOH B . J 3 HOH 10 113 113 HOH HOH B . J 3 HOH 11 116 116 HOH HOH B . J 3 HOH 12 119 119 HOH HOH B . J 3 HOH 13 123 123 HOH HOH B . J 3 HOH 14 125 125 HOH HOH B . J 3 HOH 15 126 126 HOH HOH B . J 3 HOH 16 129 129 HOH HOH B . J 3 HOH 17 130 130 HOH HOH B . J 3 HOH 18 132 132 HOH HOH B . J 3 HOH 19 134 134 HOH HOH B . J 3 HOH 20 136 136 HOH HOH B . J 3 HOH 21 138 138 HOH HOH B . J 3 HOH 22 139 139 HOH HOH B . J 3 HOH 23 142 142 HOH HOH B . J 3 HOH 24 153 153 HOH HOH B . J 3 HOH 25 155 155 HOH HOH B . J 3 HOH 26 156 156 HOH HOH B . J 3 HOH 27 157 157 HOH HOH B . J 3 HOH 28 158 158 HOH HOH B . J 3 HOH 29 160 160 HOH HOH B . J 3 HOH 30 162 162 HOH HOH B . J 3 HOH 31 163 163 HOH HOH B . J 3 HOH 32 164 164 HOH HOH B . J 3 HOH 33 169 169 HOH HOH B . J 3 HOH 34 170 170 HOH HOH B . J 3 HOH 35 171 171 HOH HOH B . J 3 HOH 36 175 175 HOH HOH B . J 3 HOH 37 176 176 HOH HOH B . J 3 HOH 38 177 177 HOH HOH B . J 3 HOH 39 179 179 HOH HOH B . J 3 HOH 40 181 181 HOH HOH B . J 3 HOH 41 182 182 HOH HOH B . J 3 HOH 42 184 184 HOH HOH B . J 3 HOH 43 188 188 HOH HOH B . J 3 HOH 44 189 189 HOH HOH B . J 3 HOH 45 191 191 HOH HOH B . J 3 HOH 46 193 193 HOH HOH B . J 3 HOH 47 194 194 HOH HOH B . J 3 HOH 48 195 195 HOH HOH B . J 3 HOH 49 199 199 HOH HOH B . J 3 HOH 50 201 201 HOH HOH B . J 3 HOH 51 204 204 HOH HOH B . J 3 HOH 52 206 206 HOH HOH B . J 3 HOH 53 207 207 HOH HOH B . J 3 HOH 54 208 208 HOH HOH B . J 3 HOH 55 209 209 HOH HOH B . J 3 HOH 56 214 214 HOH HOH B . J 3 HOH 57 216 216 HOH HOH B . J 3 HOH 58 222 222 HOH HOH B . J 3 HOH 59 224 224 HOH HOH B . J 3 HOH 60 230 230 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 SHELXL-97 refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 476D _cell.length_a 38.764 _cell.length_b 38.764 _cell.length_c 99.084 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 476D _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting trigonal _symmetry.Int_Tables_number 146 # _exptl.entry_id 476D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_percent_sol 42.06 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.9 _exptl_crystal_grow.pdbx_details ;SITTING DROPS CONTAIN 1.0 MM SINGLE STRAND OLIGONUCLEOTIDE,20 MM SODIUM CACODYLATE BUFFER PH 6.9, 20 MM CALCIUM CLORIDE,AGAINST RESERVOIR OF 40% MPD, VAPOR DIFFUSION, SITTING DROP, temperature 295K ; _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'SODIUM CACODYLATE' ? ? ? 1 2 1 CACL2 ? ? ? 1 3 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 120 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1998-09-05 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.10012 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 5ID-B' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 5ID-B _diffrn_source.pdbx_wavelength 1.10012 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 476D _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 25.0 _reflns.d_resolution_high 1.29 _reflns.number_obs 13911 _reflns.number_all 13911 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.0890000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 28.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.9 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.29 _reflns_shell.d_res_low 1.34 _reflns_shell.percent_possible_all 99.1 _reflns_shell.Rmerge_I_obs 0.3090000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.40 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 476D _refine.ls_number_reflns_obs 13120 _refine.ls_number_reflns_all 13395 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 15.0 _refine.ls_d_res_high 1.30 _refine.ls_percent_reflns_obs 95.9 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all 0.1820000 _refine.ls_R_factor_R_work 0.1820000 _refine.ls_R_factor_R_free 0.2200000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10 _refine.ls_number_reflns_R_free 1343 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 448 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 125 _refine_hist.number_atoms_total 579 _refine_hist.d_res_high 1.30 _refine_hist.d_res_low 15.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist ? ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes ? ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol ? ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol ? ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr ? ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt ? ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt ? ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps ? ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 476D _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff 13120 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _database_PDB_matrix.entry_id 476D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 476D _struct.title 'CALCIUM FORM OF B-DNA UNDECAMER GCGAATTCGCG' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 476D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'B-DNA DODECAMER, CALCIUM FORM, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 476D _struct_ref.pdbx_db_accession 476D _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 476D A 1 ? 11 ? 476D 2 ? 12 ? 2 12 2 1 476D B 1 ? 11 ? 476D 14 ? 24 ? 14 24 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DA 4 OP1 ? ? ? 1_555 D CA . CA ? ? A DA 5 A CA 120 1_555 ? ? ? ? ? ? ? 2.286 ? ? metalc2 metalc ? ? A DA 4 OP1 ? ? ? 2_645 D CA . CA ? ? A DA 5 A CA 120 1_555 ? ? ? ? ? ? ? 2.286 ? ? metalc3 metalc ? ? A DA 4 OP1 ? ? ? 3_765 D CA . CA ? ? A DA 5 A CA 120 1_555 ? ? ? ? ? ? ? 2.286 ? ? metalc4 metalc ? ? A DC 10 OP1 ? ? ? 4_445 F CA . CA ? ? A DC 11 B CA 101 1_555 ? ? ? ? ? ? ? 2.346 ? ? metalc5 metalc ? ? A DG 11 OP2 ? ? ? 1_555 E CA . CA A ? A DG 12 A CA 124 1_555 ? ? ? ? ? ? ? 2.528 ? ? metalc6 metalc ? ? A DG 11 O6 ? ? ? 4_445 F CA . CA ? ? A DG 12 B CA 101 1_555 ? ? ? ? ? ? ? 2.358 ? ? metalc7 metalc ? ? A DG 11 OP1 ? ? ? 6_665 F CA . CA ? ? A DG 12 B CA 101 1_555 ? ? ? ? ? ? ? 2.354 ? ? metalc8 metalc ? ? C CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 112 A HOH 126 1_555 ? ? ? ? ? ? ? 2.530 ? ? metalc9 metalc ? ? C CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 112 A HOH 127 1_555 ? ? ? ? ? ? ? 2.436 ? ? metalc10 metalc ? ? C CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 112 A HOH 128 1_555 ? ? ? ? ? ? ? 2.284 ? ? metalc11 metalc ? ? C CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 112 A HOH 129 1_555 ? ? ? ? ? ? ? 2.364 ? ? metalc12 metalc ? ? C CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 112 B HOH 113 1_555 ? ? ? ? ? ? ? 2.315 ? ? metalc13 metalc ? ? C CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 112 B HOH 116 1_555 ? ? ? ? ? ? ? 2.397 ? ? metalc14 metalc ? ? C CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 112 B HOH 119 1_555 ? ? ? ? ? ? ? 2.567 ? ? metalc15 metalc ? ? D CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 120 A HOH 130 1_555 ? ? ? ? ? ? ? 2.335 ? ? metalc16 metalc ? ? D CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 120 A HOH 130 2_645 ? ? ? ? ? ? ? 2.335 ? ? metalc17 metalc ? ? D CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 120 A HOH 130 3_765 ? ? ? ? ? ? ? 2.335 ? ? metalc18 metalc ? ? E CA . CA A ? ? 1_555 I HOH . O ? ? A CA 124 A HOH 134 1_555 ? ? ? ? ? ? ? 2.568 ? ? metalc19 metalc ? ? E CA . CA A ? ? 1_555 I HOH . O ? ? A CA 124 A HOH 146 1_555 ? ? ? ? ? ? ? 3.182 ? ? metalc20 metalc ? ? E CA . CA A ? ? 1_555 I HOH . O ? ? A CA 124 A HOH 168 1_555 ? ? ? ? ? ? ? 2.580 ? ? metalc21 metalc ? ? E CA . CA A ? ? 1_555 I HOH . O ? ? A CA 124 A HOH 168 2_755 ? ? ? ? ? ? ? 2.446 ? ? metalc22 metalc ? ? B DC 2 OP2 ? ? ? 1_555 H CA . CA ? ? B DC 15 B CA 122 1_555 ? ? ? ? ? ? ? 2.216 ? ? metalc23 metalc ? ? B DC 2 OP2 ? ? ? 3_765 H CA . CA ? ? B DC 15 B CA 122 1_555 ? ? ? ? ? ? ? 2.216 ? ? metalc24 metalc ? ? B DC 2 OP2 ? ? ? 2_645 H CA . CA ? ? B DC 15 B CA 122 1_555 ? ? ? ? ? ? ? 2.216 ? ? metalc25 metalc ? ? B DG 11 OP1 ? ? ? 1_555 F CA . CA ? ? B DG 24 B CA 101 1_555 ? ? ? ? ? ? ? 2.226 ? ? metalc26 metalc ? ? B DG 11 OP2 ? ? ? 1_555 G CA . CA ? ? B DG 24 B CA 104 1_555 ? ? ? ? ? ? ? 2.337 ? ? metalc27 metalc ? ? F CA . CA ? ? ? 1_555 J HOH . O ? ? B CA 101 B HOH 102 1_555 ? ? ? ? ? ? ? 2.333 ? ? metalc28 metalc ? ? F CA . CA ? ? ? 1_555 J HOH . O ? ? B CA 101 B HOH 103 1_555 ? ? ? ? ? ? ? 2.427 ? ? metalc29 metalc ? ? G CA . CA ? ? ? 1_555 J HOH . O ? ? B CA 104 B HOH 105 1_555 ? ? ? ? ? ? ? 2.379 ? ? metalc30 metalc ? ? G CA . CA ? ? ? 1_555 J HOH . O ? ? B CA 104 B HOH 106 1_555 ? ? ? ? ? ? ? 2.511 ? ? metalc31 metalc ? ? G CA . CA ? ? ? 1_555 J HOH . O ? ? B CA 104 B HOH 107 1_555 ? ? ? ? ? ? ? 2.378 ? ? metalc32 metalc ? ? G CA . CA ? ? ? 1_555 J HOH . O ? ? B CA 104 B HOH 108 1_555 ? ? ? ? ? ? ? 2.261 ? ? metalc33 metalc ? ? G CA . CA ? ? ? 1_555 J HOH . O ? ? B CA 104 B HOH 109 1_555 ? ? ? ? ? ? ? 2.581 ? ? metalc34 metalc ? ? G CA . CA ? ? ? 1_555 J HOH . O ? ? B CA 104 B HOH 110 1_555 ? ? ? ? ? ? ? 2.212 ? ? metalc35 metalc ? ? G CA . CA ? ? ? 1_555 J HOH . O ? ? B CA 104 B HOH 111 1_555 ? ? ? ? ? ? ? 2.233 ? ? metalc36 metalc ? ? H CA . CA ? ? ? 1_555 J HOH . O ? ? B CA 122 B HOH 216 1_555 ? ? ? ? ? ? ? 2.568 ? ? metalc37 metalc ? ? H CA . CA ? ? ? 1_555 J HOH . O ? ? B CA 122 B HOH 216 2_645 ? ? ? ? ? ? ? 2.568 ? ? metalc38 metalc ? ? H CA . CA ? ? ? 1_555 J HOH . O ? ? B CA 122 B HOH 216 3_765 ? ? ? ? ? ? ? 2.568 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 10 N3 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 10 O2 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 10 N4 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 6 N3 ? ? A DA 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 6 O4 ? ? A DA 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 5 N1 ? ? A DT 7 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 5 N6 ? ? A DT 7 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 8 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 8 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 3 N1 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 3 O6 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 3 N2 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? A DA 4 ? A DA 5 ? 1_555 CA ? D CA . ? A CA 120 ? 1_555 OP1 ? A DA 4 ? A DA 5 ? 2_645 94.1 ? 2 OP1 ? A DA 4 ? A DA 5 ? 1_555 CA ? D CA . ? A CA 120 ? 1_555 OP1 ? A DA 4 ? A DA 5 ? 3_765 94.1 ? 3 OP1 ? A DA 4 ? A DA 5 ? 2_645 CA ? D CA . ? A CA 120 ? 1_555 OP1 ? A DA 4 ? A DA 5 ? 3_765 94.1 ? 4 OP1 ? A DA 4 ? A DA 5 ? 1_555 CA ? D CA . ? A CA 120 ? 1_555 O ? I HOH . ? A HOH 130 ? 1_555 82.9 ? 5 OP1 ? A DA 4 ? A DA 5 ? 2_645 CA ? D CA . ? A CA 120 ? 1_555 O ? I HOH . ? A HOH 130 ? 1_555 167.0 ? 6 OP1 ? A DA 4 ? A DA 5 ? 3_765 CA ? D CA . ? A CA 120 ? 1_555 O ? I HOH . ? A HOH 130 ? 1_555 98.7 ? 7 OP1 ? A DA 4 ? A DA 5 ? 1_555 CA ? D CA . ? A CA 120 ? 1_555 O ? I HOH . ? A HOH 130 ? 2_645 98.7 ? 8 OP1 ? A DA 4 ? A DA 5 ? 2_645 CA ? D CA . ? A CA 120 ? 1_555 O ? I HOH . ? A HOH 130 ? 2_645 82.9 ? 9 OP1 ? A DA 4 ? A DA 5 ? 3_765 CA ? D CA . ? A CA 120 ? 1_555 O ? I HOH . ? A HOH 130 ? 2_645 167.0 ? 10 O ? I HOH . ? A HOH 130 ? 1_555 CA ? D CA . ? A CA 120 ? 1_555 O ? I HOH . ? A HOH 130 ? 2_645 85.1 ? 11 OP1 ? A DA 4 ? A DA 5 ? 1_555 CA ? D CA . ? A CA 120 ? 1_555 O ? I HOH . ? A HOH 130 ? 3_765 167.0 ? 12 OP1 ? A DA 4 ? A DA 5 ? 2_645 CA ? D CA . ? A CA 120 ? 1_555 O ? I HOH . ? A HOH 130 ? 3_765 98.7 ? 13 OP1 ? A DA 4 ? A DA 5 ? 3_765 CA ? D CA . ? A CA 120 ? 1_555 O ? I HOH . ? A HOH 130 ? 3_765 82.9 ? 14 O ? I HOH . ? A HOH 130 ? 1_555 CA ? D CA . ? A CA 120 ? 1_555 O ? I HOH . ? A HOH 130 ? 3_765 85.1 ? 15 O ? I HOH . ? A HOH 130 ? 2_645 CA ? D CA . ? A CA 120 ? 1_555 O ? I HOH . ? A HOH 130 ? 3_765 85.1 ? 16 OP1 ? A DC 10 ? A DC 11 ? 4_445 CA ? F CA . ? B CA 101 ? 1_555 O6 ? A DG 11 ? A DG 12 ? 4_445 92.1 ? 17 OP1 ? A DC 10 ? A DC 11 ? 4_445 CA ? F CA . ? B CA 101 ? 1_555 OP1 ? A DG 11 ? A DG 12 ? 6_665 176.3 ? 18 O6 ? A DG 11 ? A DG 12 ? 4_445 CA ? F CA . ? B CA 101 ? 1_555 OP1 ? A DG 11 ? A DG 12 ? 6_665 91.5 ? 19 OP1 ? A DC 10 ? A DC 11 ? 4_445 CA ? F CA . ? B CA 101 ? 1_555 OP1 ? B DG 11 ? B DG 24 ? 1_555 87.1 ? 20 O6 ? A DG 11 ? A DG 12 ? 4_445 CA ? F CA . ? B CA 101 ? 1_555 OP1 ? B DG 11 ? B DG 24 ? 1_555 98.9 ? 21 OP1 ? A DG 11 ? A DG 12 ? 6_665 CA ? F CA . ? B CA 101 ? 1_555 OP1 ? B DG 11 ? B DG 24 ? 1_555 91.9 ? 22 OP1 ? A DC 10 ? A DC 11 ? 4_445 CA ? F CA . ? B CA 101 ? 1_555 O ? J HOH . ? B HOH 102 ? 1_555 83.2 ? 23 O6 ? A DG 11 ? A DG 12 ? 4_445 CA ? F CA . ? B CA 101 ? 1_555 O ? J HOH . ? B HOH 102 ? 1_555 165.7 ? 24 OP1 ? A DG 11 ? A DG 12 ? 6_665 CA ? F CA . ? B CA 101 ? 1_555 O ? J HOH . ? B HOH 102 ? 1_555 93.3 ? 25 OP1 ? B DG 11 ? B DG 24 ? 1_555 CA ? F CA . ? B CA 101 ? 1_555 O ? J HOH . ? B HOH 102 ? 1_555 94.3 ? 26 OP1 ? A DC 10 ? A DC 11 ? 4_445 CA ? F CA . ? B CA 101 ? 1_555 O ? J HOH . ? B HOH 103 ? 1_555 88.6 ? 27 O6 ? A DG 11 ? A DG 12 ? 4_445 CA ? F CA . ? B CA 101 ? 1_555 O ? J HOH . ? B HOH 103 ? 1_555 86.2 ? 28 OP1 ? A DG 11 ? A DG 12 ? 6_665 CA ? F CA . ? B CA 101 ? 1_555 O ? J HOH . ? B HOH 103 ? 1_555 92.1 ? 29 OP1 ? B DG 11 ? B DG 24 ? 1_555 CA ? F CA . ? B CA 101 ? 1_555 O ? J HOH . ? B HOH 103 ? 1_555 173.4 ? 30 O ? J HOH . ? B HOH 102 ? 1_555 CA ? F CA . ? B CA 101 ? 1_555 O ? J HOH . ? B HOH 103 ? 1_555 80.3 ? 31 OP2 ? A DG 11 ? A DG 12 ? 1_555 CA A E CA . ? A CA 124 ? 1_555 O ? I HOH . ? A HOH 134 ? 1_555 76.8 ? 32 OP2 ? A DG 11 ? A DG 12 ? 1_555 CA A E CA . ? A CA 124 ? 1_555 O ? I HOH . ? A HOH 146 ? 1_555 112.6 ? 33 O ? I HOH . ? A HOH 134 ? 1_555 CA A E CA . ? A CA 124 ? 1_555 O ? I HOH . ? A HOH 146 ? 1_555 168.3 ? 34 OP2 ? A DG 11 ? A DG 12 ? 1_555 CA A E CA . ? A CA 124 ? 1_555 O ? I HOH . ? A HOH 168 ? 1_555 82.0 ? 35 O ? I HOH . ? A HOH 134 ? 1_555 CA A E CA . ? A CA 124 ? 1_555 O ? I HOH . ? A HOH 168 ? 1_555 78.9 ? 36 O ? I HOH . ? A HOH 146 ? 1_555 CA A E CA . ? A CA 124 ? 1_555 O ? I HOH . ? A HOH 168 ? 1_555 95.1 ? 37 OP2 ? A DG 11 ? A DG 12 ? 1_555 CA A E CA . ? A CA 124 ? 1_555 O ? I HOH . ? A HOH 168 ? 2_755 78.2 ? 38 O ? I HOH . ? A HOH 134 ? 1_555 CA A E CA . ? A CA 124 ? 1_555 O ? I HOH . ? A HOH 168 ? 2_755 81.4 ? 39 O ? I HOH . ? A HOH 146 ? 1_555 CA A E CA . ? A CA 124 ? 1_555 O ? I HOH . ? A HOH 168 ? 2_755 106.8 ? 40 O ? I HOH . ? A HOH 168 ? 1_555 CA A E CA . ? A CA 124 ? 1_555 O ? I HOH . ? A HOH 168 ? 2_755 154.8 ? 41 O ? I HOH . ? A HOH 126 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? I HOH . ? A HOH 127 ? 1_555 146.0 ? 42 O ? I HOH . ? A HOH 126 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? I HOH . ? A HOH 128 ? 1_555 87.1 ? 43 O ? I HOH . ? A HOH 127 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? I HOH . ? A HOH 128 ? 1_555 91.8 ? 44 O ? I HOH . ? A HOH 126 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? I HOH . ? A HOH 129 ? 1_555 76.2 ? 45 O ? I HOH . ? A HOH 127 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? I HOH . ? A HOH 129 ? 1_555 70.2 ? 46 O ? I HOH . ? A HOH 128 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? I HOH . ? A HOH 129 ? 1_555 96.8 ? 47 O ? I HOH . ? A HOH 126 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? J HOH . ? B HOH 113 ? 1_555 89.1 ? 48 O ? I HOH . ? A HOH 127 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? J HOH . ? B HOH 113 ? 1_555 93.2 ? 49 O ? I HOH . ? A HOH 128 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? J HOH . ? B HOH 113 ? 1_555 174.9 ? 50 O ? I HOH . ? A HOH 129 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? J HOH . ? B HOH 113 ? 1_555 85.6 ? 51 O ? I HOH . ? A HOH 126 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? J HOH . ? B HOH 116 ? 1_555 72.0 ? 52 O ? I HOH . ? A HOH 127 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? J HOH . ? B HOH 116 ? 1_555 141.9 ? 53 O ? I HOH . ? A HOH 128 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? J HOH . ? B HOH 116 ? 1_555 93.0 ? 54 O ? I HOH . ? A HOH 129 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? J HOH . ? B HOH 116 ? 1_555 146.1 ? 55 O ? J HOH . ? B HOH 113 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? J HOH . ? B HOH 116 ? 1_555 82.6 ? 56 O ? I HOH . ? A HOH 126 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? J HOH . ? B HOH 119 ? 1_555 144.8 ? 57 O ? I HOH . ? A HOH 127 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? J HOH . ? B HOH 119 ? 1_555 69.2 ? 58 O ? I HOH . ? A HOH 128 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? J HOH . ? B HOH 119 ? 1_555 90.3 ? 59 O ? I HOH . ? A HOH 129 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? J HOH . ? B HOH 119 ? 1_555 138.9 ? 60 O ? J HOH . ? B HOH 113 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? J HOH . ? B HOH 119 ? 1_555 90.8 ? 61 O ? J HOH . ? B HOH 116 ? 1_555 CA ? C CA . ? A CA 112 ? 1_555 O ? J HOH . ? B HOH 119 ? 1_555 73.1 ? 62 OP2 ? B DC 2 ? B DC 15 ? 1_555 CA ? H CA . ? B CA 122 ? 1_555 OP2 ? B DC 2 ? B DC 15 ? 3_765 99.4 ? 63 OP2 ? B DC 2 ? B DC 15 ? 1_555 CA ? H CA . ? B CA 122 ? 1_555 OP2 ? B DC 2 ? B DC 15 ? 2_645 99.4 ? 64 OP2 ? B DC 2 ? B DC 15 ? 3_765 CA ? H CA . ? B CA 122 ? 1_555 OP2 ? B DC 2 ? B DC 15 ? 2_645 99.4 ? 65 OP2 ? B DC 2 ? B DC 15 ? 1_555 CA ? H CA . ? B CA 122 ? 1_555 O ? J HOH . ? B HOH 216 ? 1_555 60.7 ? 66 OP2 ? B DC 2 ? B DC 15 ? 3_765 CA ? H CA . ? B CA 122 ? 1_555 O ? J HOH . ? B HOH 216 ? 1_555 101.3 ? 67 OP2 ? B DC 2 ? B DC 15 ? 2_645 CA ? H CA . ? B CA 122 ? 1_555 O ? J HOH . ? B HOH 216 ? 1_555 153.3 ? 68 OP2 ? B DC 2 ? B DC 15 ? 1_555 CA ? H CA . ? B CA 122 ? 1_555 O ? J HOH . ? B HOH 216 ? 2_645 101.3 ? 69 OP2 ? B DC 2 ? B DC 15 ? 3_765 CA ? H CA . ? B CA 122 ? 1_555 O ? J HOH . ? B HOH 216 ? 2_645 153.3 ? 70 OP2 ? B DC 2 ? B DC 15 ? 2_645 CA ? H CA . ? B CA 122 ? 1_555 O ? J HOH . ? B HOH 216 ? 2_645 60.7 ? 71 O ? J HOH . ? B HOH 216 ? 1_555 CA ? H CA . ? B CA 122 ? 1_555 O ? J HOH . ? B HOH 216 ? 2_645 103.4 ? 72 OP2 ? B DC 2 ? B DC 15 ? 1_555 CA ? H CA . ? B CA 122 ? 1_555 O ? J HOH . ? B HOH 216 ? 3_765 153.3 ? 73 OP2 ? B DC 2 ? B DC 15 ? 3_765 CA ? H CA . ? B CA 122 ? 1_555 O ? J HOH . ? B HOH 216 ? 3_765 60.7 ? 74 OP2 ? B DC 2 ? B DC 15 ? 2_645 CA ? H CA . ? B CA 122 ? 1_555 O ? J HOH . ? B HOH 216 ? 3_765 101.3 ? 75 O ? J HOH . ? B HOH 216 ? 1_555 CA ? H CA . ? B CA 122 ? 1_555 O ? J HOH . ? B HOH 216 ? 3_765 103.4 ? 76 O ? J HOH . ? B HOH 216 ? 2_645 CA ? H CA . ? B CA 122 ? 1_555 O ? J HOH . ? B HOH 216 ? 3_765 103.4 ? 77 OP2 ? B DG 11 ? B DG 24 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 105 ? 1_555 82.4 ? 78 OP2 ? B DG 11 ? B DG 24 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 106 ? 1_555 102.4 ? 79 O ? J HOH . ? B HOH 105 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 106 ? 1_555 68.0 ? 80 OP2 ? B DG 11 ? B DG 24 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 107 ? 1_555 93.7 ? 81 O ? J HOH . ? B HOH 105 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 107 ? 1_555 137.9 ? 82 O ? J HOH . ? B HOH 106 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 107 ? 1_555 72.2 ? 83 OP2 ? B DG 11 ? B DG 24 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 108 ? 1_555 83.0 ? 84 O ? J HOH . ? B HOH 105 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 108 ? 1_555 148.7 ? 85 O ? J HOH . ? B HOH 106 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 108 ? 1_555 142.6 ? 86 O ? J HOH . ? B HOH 107 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 108 ? 1_555 70.5 ? 87 OP2 ? B DG 11 ? B DG 24 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 109 ? 1_555 51.3 ? 88 O ? J HOH . ? B HOH 105 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 109 ? 1_555 107.3 ? 89 O ? J HOH . ? B HOH 106 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 109 ? 1_555 153.4 ? 90 O ? J HOH . ? B HOH 107 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 109 ? 1_555 102.2 ? 91 O ? J HOH . ? B HOH 108 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 109 ? 1_555 43.4 ? 92 OP2 ? B DG 11 ? B DG 24 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 110 ? 1_555 167.6 ? 93 O ? J HOH . ? B HOH 105 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 110 ? 1_555 100.6 ? 94 O ? J HOH . ? B HOH 106 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 110 ? 1_555 89.8 ? 95 O ? J HOH . ? B HOH 107 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 110 ? 1_555 92.0 ? 96 O ? J HOH . ? B HOH 108 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 110 ? 1_555 88.5 ? 97 O ? J HOH . ? B HOH 109 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 110 ? 1_555 116.7 ? 98 OP2 ? B DG 11 ? B DG 24 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 111 ? 1_555 90.5 ? 99 O ? J HOH . ? B HOH 105 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 111 ? 1_555 70.4 ? 100 O ? J HOH . ? B HOH 106 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 111 ? 1_555 133.9 ? 101 O ? J HOH . ? B HOH 107 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 111 ? 1_555 151.7 ? 102 O ? J HOH . ? B HOH 108 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 111 ? 1_555 82.3 ? 103 O ? J HOH . ? B HOH 109 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 111 ? 1_555 59.8 ? 104 O ? J HOH . ? B HOH 110 ? 1_555 CA ? G CA . ? B CA 104 ? 1_555 O ? J HOH . ? B HOH 111 ? 1_555 79.4 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B CA 101 ? 6 'BINDING SITE FOR RESIDUE CA B 101' AC2 Software B CA 104 ? 8 'BINDING SITE FOR RESIDUE CA B 104' AC3 Software A CA 112 ? 7 'BINDING SITE FOR RESIDUE CA A 112' AC4 Software A CA 120 ? 6 'BINDING SITE FOR RESIDUE CA A 120' AC5 Software B CA 122 ? 6 'BINDING SITE FOR RESIDUE CA B 122' AC6 Software A CA 124 ? 8 'BINDING SITE FOR RESIDUE CA A 124' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 DC A 10 ? DC A 11 . ? 4_445 ? 2 AC1 6 DG A 11 ? DG A 12 . ? 4_445 ? 3 AC1 6 DG A 11 ? DG A 12 . ? 6_665 ? 4 AC1 6 DG B 11 ? DG B 24 . ? 1_555 ? 5 AC1 6 HOH J . ? HOH B 102 . ? 1_555 ? 6 AC1 6 HOH J . ? HOH B 103 . ? 1_555 ? 7 AC2 8 DG B 11 ? DG B 24 . ? 1_555 ? 8 AC2 8 HOH J . ? HOH B 105 . ? 1_555 ? 9 AC2 8 HOH J . ? HOH B 106 . ? 1_555 ? 10 AC2 8 HOH J . ? HOH B 107 . ? 1_555 ? 11 AC2 8 HOH J . ? HOH B 108 . ? 1_555 ? 12 AC2 8 HOH J . ? HOH B 109 . ? 1_555 ? 13 AC2 8 HOH J . ? HOH B 110 . ? 1_555 ? 14 AC2 8 HOH J . ? HOH B 111 . ? 1_555 ? 15 AC3 7 HOH I . ? HOH A 126 . ? 1_555 ? 16 AC3 7 HOH I . ? HOH A 127 . ? 1_555 ? 17 AC3 7 HOH I . ? HOH A 128 . ? 1_555 ? 18 AC3 7 HOH I . ? HOH A 129 . ? 1_555 ? 19 AC3 7 HOH J . ? HOH B 113 . ? 1_555 ? 20 AC3 7 HOH J . ? HOH B 116 . ? 1_555 ? 21 AC3 7 HOH J . ? HOH B 119 . ? 1_555 ? 22 AC4 6 DA A 4 ? DA A 5 . ? 2_645 ? 23 AC4 6 DA A 4 ? DA A 5 . ? 3_765 ? 24 AC4 6 DA A 4 ? DA A 5 . ? 1_555 ? 25 AC4 6 HOH I . ? HOH A 130 . ? 1_555 ? 26 AC4 6 HOH I . ? HOH A 130 . ? 3_765 ? 27 AC4 6 HOH I . ? HOH A 130 . ? 2_645 ? 28 AC5 6 DC B 2 ? DC B 15 . ? 2_645 ? 29 AC5 6 DC B 2 ? DC B 15 . ? 1_555 ? 30 AC5 6 DC B 2 ? DC B 15 . ? 3_765 ? 31 AC5 6 HOH J . ? HOH B 216 . ? 1_555 ? 32 AC5 6 HOH J . ? HOH B 216 . ? 3_765 ? 33 AC5 6 HOH J . ? HOH B 216 . ? 2_645 ? 34 AC6 8 DG A 11 ? DG A 12 . ? 1_555 ? 35 AC6 8 HOH I . ? HOH A 125 . ? 2_755 ? 36 AC6 8 HOH I . ? HOH A 125 . ? 3_775 ? 37 AC6 8 HOH I . ? HOH A 134 . ? 3_775 ? 38 AC6 8 HOH I . ? HOH A 134 . ? 1_555 ? 39 AC6 8 HOH I . ? HOH A 134 . ? 2_755 ? 40 AC6 8 HOH I . ? HOH A 168 . ? 2_755 ? 41 AC6 8 HOH I . ? HOH A 168 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 108 ? ? O B HOH 109 ? ? 1.82 2 1 O B HOH 109 ? ? O B HOH 169 ? ? 2.07 3 1 OP2 B DG 24 ? ? O B HOH 109 ? ? 2.14 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 101.57 108.00 -6.43 0.70 N 2 1 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 103.70 108.00 -4.30 0.70 N 3 1 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 102.57 108.00 -5.43 0.70 N 4 1 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? N1 B DT 20 ? ? 103.68 108.00 -4.32 0.70 N 5 1 "C3'" B DG 22 ? ? "C2'" B DG 22 ? ? "C1'" B DG 22 ? ? 97.19 102.40 -5.21 0.80 N # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A CA 120 ? D CA . 2 1 B CA 122 ? H CA . 3 1 A HOH 134 ? I HOH . 4 1 B HOH 125 ? J HOH . 5 1 B HOH 136 ? J HOH . 6 1 B HOH 181 ? J HOH . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CA CA CA N N 1 DA OP3 O N N 2 DA P P N N 3 DA OP1 O N N 4 DA OP2 O N N 5 DA "O5'" O N N 6 DA "C5'" C N N 7 DA "C4'" C N R 8 DA "O4'" O N N 9 DA "C3'" C N S 10 DA "O3'" O N N 11 DA "C2'" C N N 12 DA "C1'" C N R 13 DA N9 N Y N 14 DA C8 C Y N 15 DA N7 N Y N 16 DA C5 C Y N 17 DA C6 C Y N 18 DA N6 N N N 19 DA N1 N Y N 20 DA C2 C Y N 21 DA N3 N Y N 22 DA C4 C Y N 23 DA HOP3 H N N 24 DA HOP2 H N N 25 DA "H5'" H N N 26 DA "H5''" H N N 27 DA "H4'" H N N 28 DA "H3'" H N N 29 DA "HO3'" H N N 30 DA "H2'" H N N 31 DA "H2''" H N N 32 DA "H1'" H N N 33 DA H8 H N N 34 DA H61 H N N 35 DA H62 H N N 36 DA H2 H N N 37 DC OP3 O N N 38 DC P P N N 39 DC OP1 O N N 40 DC OP2 O N N 41 DC "O5'" O N N 42 DC "C5'" C N N 43 DC "C4'" C N R 44 DC "O4'" O N N 45 DC "C3'" C N S 46 DC "O3'" O N N 47 DC "C2'" C N N 48 DC "C1'" C N R 49 DC N1 N N N 50 DC C2 C N N 51 DC O2 O N N 52 DC N3 N N N 53 DC C4 C N N 54 DC N4 N N N 55 DC C5 C N N 56 DC C6 C N N 57 DC HOP3 H N N 58 DC HOP2 H N N 59 DC "H5'" H N N 60 DC "H5''" H N N 61 DC "H4'" H N N 62 DC "H3'" H N N 63 DC "HO3'" H N N 64 DC "H2'" H N N 65 DC "H2''" H N N 66 DC "H1'" H N N 67 DC H41 H N N 68 DC H42 H N N 69 DC H5 H N N 70 DC H6 H N N 71 DG OP3 O N N 72 DG P P N N 73 DG OP1 O N N 74 DG OP2 O N N 75 DG "O5'" O N N 76 DG "C5'" C N N 77 DG "C4'" C N R 78 DG "O4'" O N N 79 DG "C3'" C N S 80 DG "O3'" O N N 81 DG "C2'" C N N 82 DG "C1'" C N R 83 DG N9 N Y N 84 DG C8 C Y N 85 DG N7 N Y N 86 DG C5 C Y N 87 DG C6 C N N 88 DG O6 O N N 89 DG N1 N N N 90 DG C2 C N N 91 DG N2 N N N 92 DG N3 N N N 93 DG C4 C Y N 94 DG HOP3 H N N 95 DG HOP2 H N N 96 DG "H5'" H N N 97 DG "H5''" H N N 98 DG "H4'" H N N 99 DG "H3'" H N N 100 DG "HO3'" H N N 101 DG "H2'" H N N 102 DG "H2''" H N N 103 DG "H1'" H N N 104 DG H8 H N N 105 DG H1 H N N 106 DG H21 H N N 107 DG H22 H N N 108 DT OP3 O N N 109 DT P P N N 110 DT OP1 O N N 111 DT OP2 O N N 112 DT "O5'" O N N 113 DT "C5'" C N N 114 DT "C4'" C N R 115 DT "O4'" O N N 116 DT "C3'" C N S 117 DT "O3'" O N N 118 DT "C2'" C N N 119 DT "C1'" C N R 120 DT N1 N N N 121 DT C2 C N N 122 DT O2 O N N 123 DT N3 N N N 124 DT C4 C N N 125 DT O4 O N N 126 DT C5 C N N 127 DT C7 C N N 128 DT C6 C N N 129 DT HOP3 H N N 130 DT HOP2 H N N 131 DT "H5'" H N N 132 DT "H5''" H N N 133 DT "H4'" H N N 134 DT "H3'" H N N 135 DT "HO3'" H N N 136 DT "H2'" H N N 137 DT "H2''" H N N 138 DT "H1'" H N N 139 DT H3 H N N 140 DT H71 H N N 141 DT H72 H N N 142 DT H73 H N N 143 DT H6 H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 # _ndb_struct_conf_na.entry_id 476D _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 10 1_555 -0.176 -0.168 0.072 -14.278 -5.479 -3.232 1 A_DG2:DC23_B A 2 ? B 23 ? 19 1 1 A DC 2 1_555 B DG 9 1_555 0.239 -0.078 0.209 -6.169 4.569 -0.442 2 A_DC3:DG22_B A 3 ? B 22 ? 19 1 1 A DG 3 1_555 B DC 8 1_555 -0.263 -0.118 0.080 13.444 -12.453 1.235 3 A_DG4:DC21_B A 4 ? B 21 ? 19 1 1 A DA 4 1_555 B DT 7 1_555 0.099 -0.128 -0.072 8.686 -16.418 3.603 4 A_DA5:DT20_B A 5 ? B 20 ? 20 1 1 A DA 5 1_555 B DT 6 1_555 -0.059 -0.097 0.144 2.862 -15.987 5.984 5 A_DA6:DT19_B A 6 ? B 19 ? 20 1 1 A DT 6 1_555 B DA 5 1_555 -0.117 -0.167 0.109 0.537 -17.701 3.927 6 A_DT7:DA18_B A 7 ? B 18 ? 20 1 1 A DT 7 1_555 B DA 4 1_555 0.020 -0.140 -0.077 -3.011 -17.045 4.189 7 A_DT8:DA17_B A 8 ? B 17 ? 20 1 1 A DC 8 1_555 B DG 3 1_555 0.125 -0.105 0.046 -11.355 -10.532 0.606 8 A_DC9:DG16_B A 9 ? B 16 ? 19 1 1 A DG 9 1_555 B DC 2 1_555 -0.225 -0.105 0.138 1.774 4.801 0.806 9 A_DG10:DC15_B A 10 ? B 15 ? 19 1 1 A DC 10 1_555 B DG 1 1_555 0.221 -0.151 0.004 8.821 2.932 -0.208 10 A_DC11:DG14_B A 11 ? B 14 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 10 1_555 A DC 2 1_555 B DG 9 1_555 0.887 0.462 3.242 -1.059 -7.587 36.817 1.680 -1.511 3.064 -11.856 1.655 37.579 1 AA_DG2DC3:DG22DC23_BB A 2 ? B 23 ? A 3 ? B 22 ? 1 A DC 2 1_555 B DG 9 1_555 A DG 3 1_555 B DC 8 1_555 -0.273 0.729 2.980 1.280 6.689 25.718 -0.063 0.909 3.052 14.701 -2.814 26.590 2 AA_DC3DG4:DC21DG22_BB A 3 ? B 22 ? A 4 ? B 21 ? 1 A DG 3 1_555 B DC 8 1_555 A DA 4 1_555 B DT 7 1_555 -0.282 0.009 3.337 -0.275 2.173 38.849 -0.255 0.389 3.335 3.264 0.414 38.909 3 AA_DG4DA5:DT20DC21_BB A 4 ? B 21 ? A 5 ? B 20 ? 1 A DA 4 1_555 B DT 7 1_555 A DA 5 1_555 B DT 6 1_555 -0.002 -0.141 3.291 -3.266 0.531 38.358 -0.280 -0.404 3.278 0.807 4.959 38.495 4 AA_DA5DA6:DT19DT20_BB A 5 ? B 20 ? A 6 ? B 19 ? 1 A DA 5 1_555 B DT 6 1_555 A DT 6 1_555 B DA 5 1_555 -0.046 -0.549 3.287 -0.131 -3.223 33.991 -0.418 0.058 3.324 -5.498 0.224 34.139 5 AA_DA6DT7:DA18DT19_BB A 6 ? B 19 ? A 7 ? B 18 ? 1 A DT 6 1_555 B DA 5 1_555 A DT 7 1_555 B DA 4 1_555 0.084 -0.266 3.205 2.734 -0.810 37.453 -0.309 0.220 3.207 -1.260 -4.251 37.558 6 AA_DT7DT8:DA17DA18_BB A 7 ? B 18 ? A 8 ? B 17 ? 1 A DT 7 1_555 B DA 4 1_555 A DC 8 1_555 B DG 3 1_555 0.329 -0.082 3.469 -0.386 -0.566 40.790 -0.051 -0.517 3.467 -0.812 0.553 40.796 7 AA_DT8DC9:DG16DA17_BB A 8 ? B 17 ? A 9 ? B 16 ? 1 A DC 8 1_555 B DG 3 1_555 A DG 9 1_555 B DC 2 1_555 0.190 0.399 3.052 -1.101 2.007 30.778 0.384 -0.557 3.062 3.775 2.072 30.861 8 AA_DC9DG10:DC15DG16_BB A 9 ? B 16 ? A 10 ? B 15 ? 1 A DG 9 1_555 B DC 2 1_555 A DC 10 1_555 B DG 1 1_555 -0.511 -0.402 3.260 1.031 -0.366 30.246 -0.696 1.185 3.246 -0.701 -1.975 30.266 9 AA_DG10DC11:DG14DC15_BB A 10 ? B 15 ? A 11 ? B 14 ? # _atom_sites.entry_id 476D _atom_sites.fract_transf_matrix[1][1] 0.025797 _atom_sites.fract_transf_matrix[1][2] 0.014894 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029788 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010092 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CA N O P # loop_