HEADER HEME-BINDING PROTEIN 15-SEP-11 4A1M TITLE NMR STRUCTURE OF PROTOPORPHYRIN-IX BOUND MURINE P22HBP COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEME-BINDING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 7-190; COMPND 5 SYNONYM: P22HBP, HEME BINDING PROTEIN P22HBP; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PJN2 KEYWDS HEME-BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR B.J.GOODFELLOW,J.S.DIAS,A.L.MACEDO,G.C.FERREIRA,F.C.PETERSON, AUTHOR 2 B.F.VOLKMAN,I.C.N.DUARTE REVDAT 3 14-JUN-23 4A1M 1 REMARK REVDAT 2 26-OCT-11 4A1M 1 ATOM REVDAT 1 05-OCT-11 4A1M 0 JRNL AUTH B.J.GOODFELLOW,J.S.DIAS,A.L.MACEDO,G.C.FERREIRA, JRNL AUTH 2 F.C.PETERSON,B.F.VOLKMAN,I.C.N.DUARTE JRNL TITL THE NMR STRUCTURE OF PROTOPORPHYRIN-IX BOUND MURINE P22HBP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4A1M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1290049624. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303.0 REMARK 210 PH : 8.0 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : 1.0 ATM REMARK 210 SAMPLE CONTENTS : 10% WATER/90% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D/3D 15N NOESY; 2D/3D 13C NOESY REMARK 210 (ALIPHATIC AND AROMATIC) REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.1 REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY ON 13C, 15N-LABELED HBP. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A -4 REMARK 465 LYS A -3 REMARK 465 ASN A -2 REMARK 465 SER A -1 REMARK 465 THR A 0 REMARK 465 HIS A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 22 155.13 178.79 REMARK 500 1 ASP A 28 -69.42 72.37 REMARK 500 1 MET A 76 -74.63 -121.33 REMARK 500 1 LYS A 96 -74.49 168.91 REMARK 500 1 SER A 111 74.00 179.34 REMARK 500 1 TYR A 172 -70.37 -58.95 REMARK 500 1 TYR A 179 103.21 -52.05 REMARK 500 2 SER A 12 71.96 -169.21 REMARK 500 2 GLU A 14 121.35 -178.01 REMARK 500 2 THR A 15 -41.47 -132.28 REMARK 500 2 TRP A 16 67.30 -160.70 REMARK 500 2 SER A 22 147.52 178.25 REMARK 500 2 ASP A 28 -68.69 72.64 REMARK 500 2 MET A 76 91.48 -64.91 REMARK 500 2 SER A 111 73.80 179.53 REMARK 500 2 LYS A 177 -60.99 179.74 REMARK 500 3 THR A 15 179.63 56.91 REMARK 500 3 TRP A 16 134.48 -174.21 REMARK 500 3 SER A 22 156.38 178.80 REMARK 500 3 ASP A 28 -69.13 72.50 REMARK 500 3 THR A 69 36.67 -93.86 REMARK 500 3 LYS A 96 -72.46 167.36 REMARK 500 3 SER A 111 72.75 179.44 REMARK 500 3 TYR A 179 -77.70 -47.28 REMARK 500 4 SER A 8 103.82 63.03 REMARK 500 4 SER A 12 51.65 -144.41 REMARK 500 4 THR A 15 128.88 -178.52 REMARK 500 4 TRP A 16 67.30 -118.38 REMARK 500 4 SER A 22 152.70 178.94 REMARK 500 4 ASP A 28 -69.12 72.71 REMARK 500 4 THR A 69 40.52 -93.56 REMARK 500 4 LYS A 96 -73.93 168.78 REMARK 500 4 SER A 111 74.42 179.50 REMARK 500 4 PRO A 115 98.38 -69.72 REMARK 500 4 ASP A 165 18.88 59.53 REMARK 500 4 TYR A 172 -70.32 -63.63 REMARK 500 5 SER A 12 123.52 -179.00 REMARK 500 5 GLU A 14 -68.71 -95.99 REMARK 500 5 SER A 22 154.92 179.31 REMARK 500 5 ASP A 28 -65.69 73.33 REMARK 500 5 MET A 76 91.34 -65.10 REMARK 500 5 VAL A 80 151.55 177.69 REMARK 500 5 LYS A 96 -65.25 169.70 REMARK 500 5 SER A 111 74.61 179.47 REMARK 500 5 PRO A 115 89.54 -69.86 REMARK 500 5 TYR A 179 -83.04 -46.44 REMARK 500 6 LEU A 9 -62.04 -171.74 REMARK 500 6 PHE A 10 164.02 63.11 REMARK 500 6 THR A 15 -73.86 -97.67 REMARK 500 6 TRP A 16 67.71 -117.82 REMARK 500 REMARK 500 THIS ENTRY HAS 193 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2GOV RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF MURINE P22HBP REMARK 900 RELATED ID: 17953 RELATED DB: BMRB REMARK 999 REMARK 999 SEQUENCE REMARK 999 OUR RECOMBINANT PROTEIN HAS AN N-TERM TAG AND THE PROTEIN REMARK 999 SEQUENCE STARTS AT N7. THE RESIDUES M-3, K-3, N-2, S-1, T0, H1, REMARK 999 H2, H3, H4, H5, AND H6, WERE NOT DETECTED IN THE NMR EXPERIMENTS. DBREF 4A1M A 7 190 UNP Q9R257 HEBP1_MOUSE 7 190 SEQADV 4A1M MET A -4 UNP Q9R257 EXPRESSION TAG SEQADV 4A1M LYS A -3 UNP Q9R257 EXPRESSION TAG SEQADV 4A1M ASN A -2 UNP Q9R257 EXPRESSION TAG SEQADV 4A1M SER A -1 UNP Q9R257 EXPRESSION TAG SEQADV 4A1M THR A 0 UNP Q9R257 EXPRESSION TAG SEQADV 4A1M HIS A 1 UNP Q9R257 EXPRESSION TAG SEQADV 4A1M HIS A 2 UNP Q9R257 EXPRESSION TAG SEQADV 4A1M HIS A 3 UNP Q9R257 EXPRESSION TAG SEQADV 4A1M HIS A 4 UNP Q9R257 EXPRESSION TAG SEQADV 4A1M HIS A 5 UNP Q9R257 EXPRESSION TAG SEQADV 4A1M HIS A 6 UNP Q9R257 EXPRESSION TAG SEQRES 1 A 195 MET LYS ASN SER THR HIS HIS HIS HIS HIS HIS ASN SER SEQRES 2 A 195 LEU PHE GLY SER VAL GLU THR TRP PRO TRP GLN VAL LEU SEQRES 3 A 195 SER THR GLY GLY LYS GLU ASP VAL SER TYR GLU GLU ARG SEQRES 4 A 195 ALA CYS GLU GLY GLY LYS PHE ALA THR VAL GLU VAL THR SEQRES 5 A 195 ASP LYS PRO VAL ASP GLU ALA LEU ARG GLU ALA MET PRO SEQRES 6 A 195 LYS ILE MET LYS TYR VAL GLY GLY THR ASN ASP LYS GLY SEQRES 7 A 195 VAL GLY MET GLY MET THR VAL PRO VAL SER PHE ALA VAL SEQRES 8 A 195 PHE PRO ASN GLU ASP GLY SER LEU GLN LYS LYS LEU LYS SEQRES 9 A 195 VAL TRP PHE ARG ILE PRO ASN GLN PHE GLN GLY SER PRO SEQRES 10 A 195 PRO ALA PRO SER ASP GLU SER VAL LYS ILE GLU GLU ARG SEQRES 11 A 195 GLU GLY ILE THR VAL TYR SER THR GLN PHE GLY GLY TYR SEQRES 12 A 195 ALA LYS GLU ALA ASP TYR VAL ALA HIS ALA THR GLN LEU SEQRES 13 A 195 ARG THR THR LEU GLU GLY THR PRO ALA THR TYR GLN GLY SEQRES 14 A 195 ASP VAL TYR TYR CYS ALA GLY TYR ASP PRO PRO MET LYS SEQRES 15 A 195 PRO TYR GLY ARG ARG ASN GLU VAL TRP LEU VAL LYS ALA HELIX 1 1 PRO A 50 GLY A 68 1 19 HELIX 2 2 PRO A 105 GLY A 110 1 6 HELIX 3 3 LYS A 140 LEU A 155 1 16 SHEET 1 AA 9 VAL A 20 GLY A 24 0 SHEET 2 AA 9 TYR A 31 ALA A 35 -1 O TYR A 31 N GLY A 24 SHEET 3 AA 9 THR A 129 THR A 133 -1 O VAL A 130 N ARG A 34 SHEET 4 AA 9 GLU A 184 VAL A 188 -1 O VAL A 185 N THR A 133 SHEET 5 AA 9 TYR A 167 GLY A 171 -1 O TYR A 168 N TRP A 186 SHEET 6 AA 9 VAL A 82 VAL A 86 -1 O VAL A 82 N GLY A 171 SHEET 7 AA 9 LYS A 97 PHE A 102 -1 O LYS A 99 N ALA A 85 SHEET 8 AA 9 LYS A 40 THR A 47 -1 O ALA A 42 N PHE A 102 SHEET 9 AA 9 VAL A 120 GLU A 124 -1 O LYS A 121 N THR A 43 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1