HEADER OXIDOREDUCTASE 26-SEP-11 4A2D TITLE CORIOLOPSIS GALLICA LACCASE T2 COPPER DEPLETED AT PH 4.5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LACCASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 22-517; COMPND 5 EC: 1.10.3.2 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORIOLOPSIS GALLICA; SOURCE 3 ORGANISM_TAXID: 76126 KEYWDS METAL-BINDING, OXIDOREDUCTASE, BLUE MULTICOPPER OXIDASE EXPDTA X-RAY DIFFRACTION AUTHOR E.DE LA MORA,B.VALDERRAMA,E.HORJALES,E.RUDINO-PINERA REVDAT 6 20-DEC-23 4A2D 1 HETSYN REVDAT 5 29-JUL-20 4A2D 1 COMPND REMARK HETNAM LINK REVDAT 5 2 1 SITE ATOM REVDAT 4 20-JUN-18 4A2D 1 TITLE JRNL REVDAT 3 02-MAY-12 4A2D 1 JRNL REVDAT 2 25-APR-12 4A2D 1 JRNL REVDAT 1 12-OCT-11 4A2D 0 SPRSDE 12-OCT-11 4A2D 2VE0 JRNL AUTH E.DE LA MORA,J.E.LOVETT,C.F.BLANFORD,E.F.GARMAN, JRNL AUTH 2 B.VALDERRAMA,E.RUDINO-PINERA JRNL TITL STRUCTURAL CHANGES CAUSED BY RADIATION-INDUCED REDUCTION AND JRNL TITL 2 RADIOLYSIS: THE EFFECT OF X-RAY ABSORBED DOSE IN A FUNGAL JRNL TITL 3 MULTICOPPER OXIDASE JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 68 564 2012 JRNL REFN ISSN 0907-4449 JRNL PMID 22525754 JRNL DOI 10.1107/S0907444912005343 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 75.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 90.5 REMARK 3 NUMBER OF REFLECTIONS : 28464 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1512 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2236 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.17 REMARK 3 BIN R VALUE (WORKING SET) : 0.2490 REMARK 3 BIN FREE R VALUE SET COUNT : 124 REMARK 3 BIN FREE R VALUE : 0.2980 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3727 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 95 REMARK 3 SOLVENT ATOMS : 311 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.97 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.80000 REMARK 3 B22 (A**2) : 4.56000 REMARK 3 B33 (A**2) : -0.75000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.275 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.210 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.141 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.903 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3933 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5414 ; 1.332 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 493 ; 6.386 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 166 ;35.582 ;24.337 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 501 ;12.829 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;19.905 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 630 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3061 ; 0.006 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2478 ; 0.525 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4006 ; 0.970 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1455 ; 1.403 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1408 ; 2.138 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY. REMARK 4 REMARK 4 4A2D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1290049781. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAY-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200H REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : YALE MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU IMAGE PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30457 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 34.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.600 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.47000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1V10 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 1000, PEG 8000, PH 4.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.01000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.76500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.69500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.76500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.01000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.69500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 302 CA CB CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 242 CG GLU A 242 CD 0.092 REMARK 500 ASP A 343 CB ASP A 343 CG 0.227 REMARK 500 ASP A 343 CG ASP A 343 OD1 0.538 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 343 CB - CG - OD1 ANGL. DEV. = 8.8 DEGREES REMARK 500 ASP A 343 CB - CG - OD2 ANGL. DEV. = -8.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 50 14.45 80.87 REMARK 500 LEU A 79 127.32 78.24 REMARK 500 VAL A 120 58.30 -117.55 REMARK 500 SER A 134 -139.76 48.73 REMARK 500 ALA A 198 -36.83 -36.11 REMARK 500 ASP A 226 -78.84 -152.99 REMARK 500 ALA A 261 -8.95 83.06 REMARK 500 GLN A 288 58.87 -101.44 REMARK 500 PRO A 337 58.77 -67.20 REMARK 500 ASN A 439 47.37 -151.97 REMARK 500 ASN A 463 84.51 -153.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2311 DISTANCE = 5.81 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A1520 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 87 ND1 REMARK 620 2 HIS A 130 NE2 135.0 REMARK 620 3 HIS A 472 NE2 104.5 109.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A1519 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 132 NE2 REMARK 620 2 HIS A 420 NE2 102.8 REMARK 620 3 HIS A 470 NE2 112.8 119.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A1518 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 415 ND1 REMARK 620 2 CYS A 471 SG 122.7 REMARK 620 3 HIS A 476 ND1 108.2 128.1 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4A2H RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF LACCASE FROM CORIOLOPSIS GALLICA PH 7.0 REMARK 900 RELATED ID: 4A2E RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A CORIOLOPSIS GALLICA LACCASE AT 1.7 A REMARK 900 RESOLUTION PH 5.5 REMARK 900 RELATED ID: 4A2G RELATED DB: PDB REMARK 900 CORIOLOPSIS GALLICA LACCASE AT 1.38 A REMARK 900 RELATED ID: 4A2F RELATED DB: PDB REMARK 900 CORIOLOPSIS GALLICA LACCASE AT 0.98 A REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CHANGES FOUND IN RELATION TO THE UNIPROT Q1W6B1 WERE FOUND REMARK 999 BY FITTING IN THE ELECTRON DENSITY OF A LACCASE PURIFIED REMARK 999 FROM THE NATURAL SOURCE DBREF 4A2D A 22 517 UNP Q1W6B1 Q1W6B1_9APHY 22 517 SEQADV 4A2D ASP A 39 UNP Q1W6B1 TYR 39 SEE REMARK 999 SEQADV 4A2D ASN A 151 UNP Q1W6B1 GLN 151 SEE REMARK 999 SEQADV 4A2D LYS A 178 UNP Q1W6B1 ARG 178 SEE REMARK 999 SEQADV 4A2D PRO A 182 UNP Q1W6B1 ALA 182 SEE REMARK 999 SEQADV 4A2D VAL A 183 UNP Q1W6B1 ILE 183 SEE REMARK 999 SEQADV 4A2D TYR A 229 UNP Q1W6B1 HIS 229 SEE REMARK 999 SEQADV 4A2D LEU A 256 UNP Q1W6B1 ILE 256 SEE REMARK 999 SEQADV 4A2D THR A 287 UNP Q1W6B1 ASN 287 SEE REMARK 999 SEQADV 4A2D GLN A 288 UNP Q1W6B1 THR 288 SEE REMARK 999 SEQADV 4A2D THR A 294 UNP Q1W6B1 VAL 294 SEE REMARK 999 SEQADV 4A2D THR A 314 UNP Q1W6B1 ALA 314 SEE REMARK 999 SEQADV 4A2D LYS A 329 UNP Q1W6B1 GLU 329 SEE REMARK 999 SEQADV 4A2D ASN A 356 UNP Q1W6B1 ARG 356 SEE REMARK 999 SEQADV 4A2D THR A 358 UNP Q1W6B1 SER 358 SEE REMARK 999 SEQADV 4A2D VAL A 423 UNP Q1W6B1 ALA 423 SEE REMARK 999 SEQRES 1 A 496 ALA ILE GLY PRO VAL ALA ASP LEU THR ILE SER ASN GLY SEQRES 2 A 496 ALA VAL SER PRO ASP GLY PHE SER ARG GLN ALA ILE LEU SEQRES 3 A 496 VAL ASN ASP VAL PHE PRO SER PRO LEU ILE THR GLY ASN SEQRES 4 A 496 LYS GLY ASP ARG PHE GLN LEU ASN VAL ILE ASP ASN MET SEQRES 5 A 496 THR ASN HIS THR MET LEU LYS SER THR SER ILE HIS TRP SEQRES 6 A 496 HIS GLY PHE PHE GLN HIS GLY THR ASN TRP ALA ASP GLY SEQRES 7 A 496 PRO ALA PHE VAL ASN GLN CYS PRO ILE SER THR GLY HIS SEQRES 8 A 496 ALA PHE LEU TYR ASP PHE GLN VAL PRO ASP GLN ALA GLY SEQRES 9 A 496 THR PHE TRP TYR HIS SER HIS LEU SER THR GLN TYR CYS SEQRES 10 A 496 ASP GLY LEU ARG GLY PRO ILE VAL VAL TYR ASP PRO ASN SEQRES 11 A 496 ASP PRO HIS ALA SER LEU TYR ASP VAL ASP ASP ASP SER SEQRES 12 A 496 THR VAL ILE THR LEU ALA ASP TRP TYR HIS LEU ALA ALA SEQRES 13 A 496 LYS VAL GLY ALA PRO VAL PRO THR ALA ASP ALA THR LEU SEQRES 14 A 496 ILE ASN GLY LEU GLY ARG SER ALA ALA THR LEU ALA ALA SEQRES 15 A 496 ASP LEU ALA VAL ILE THR VAL THR LYS GLY LYS ARG TYR SEQRES 16 A 496 ARG PHE ARG LEU VAL SER LEU SER CYS ASP PRO ASN TYR SEQRES 17 A 496 THR PHE SER ILE ASP GLY HIS SER LEU THR VAL ILE GLU SEQRES 18 A 496 ALA ASP SER VAL ASN LEU LYS PRO HIS THR VAL ASP SER SEQRES 19 A 496 LEU GLN ILE PHE ALA ALA GLN ARG TYR SER PHE VAL LEU SEQRES 20 A 496 ASN ALA ASP GLN ASP VAL ASP ASN TYR TRP ILE ARG ALA SEQRES 21 A 496 LEU PRO ASN SER GLY THR GLN ASN PHE ALA GLY GLY THR SEQRES 22 A 496 ASN SER ALA ILE LEU ARG TYR ASP GLY ALA ALA PRO VAL SEQRES 23 A 496 GLU PRO THR THR SER GLN THR PRO SER THR ASN PRO LEU SEQRES 24 A 496 VAL GLU SER ALA LEU THR THR LEU LYS GLY THR ALA ALA SEQRES 25 A 496 PRO GLY SER PRO THR PRO GLY GLY VAL ASP LEU ALA LEU SEQRES 26 A 496 ASN MET ALA PHE GLY PHE ALA GLY GLY ASN PHE THR ILE SEQRES 27 A 496 ASN GLY ALA SER PHE THR PRO PRO THR VAL PRO VAL LEU SEQRES 28 A 496 LEU GLN ILE LEU SER GLY ALA GLN SER ALA ALA ASP LEU SEQRES 29 A 496 LEU PRO ALA GLY SER VAL TYR SER LEU PRO ALA ASN ALA SEQRES 30 A 496 ASP ILE GLU ILE SER LEU PRO ALA THR ALA ALA ALA PRO SEQRES 31 A 496 GLY PHE PRO HIS PRO PHE HIS LEU HIS GLY HIS VAL PHE SEQRES 32 A 496 ALA VAL VAL ARG SER ALA GLY SER SER THR TYR ASN TYR SEQRES 33 A 496 ALA ASN PRO VAL TYR ARG ASP VAL VAL SER THR GLY ALA SEQRES 34 A 496 PRO GLY ASP ASN VAL THR ILE ARG PHE ARG THR ASP ASN SEQRES 35 A 496 PRO GLY PRO TRP PHE LEU HIS CYS HIS ILE ASP PHE HIS SEQRES 36 A 496 LEU GLU ALA GLY PHE ALA VAL VAL MET ALA GLU ASP ILE SEQRES 37 A 496 PRO ASP VAL ALA ALA THR ASN PRO VAL PRO GLN ALA TRP SEQRES 38 A 496 SER ASP LEU CYS PRO THR TYR ASP ALA LEU SER PRO ASP SEQRES 39 A 496 ASP GLN MODRES 4A2D ASN A 75 ASN GLYCOSYLATION SITE MODRES 4A2D ASN A 454 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET NAG C 1 14 HET NAG C 2 14 HET CU A1518 1 HET CU A1519 1 HET CU A1520 1 HET BMA A1525 12 HET BMA A1526 12 HET BMA A1527 12 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CU COPPER (II) ION HETNAM BMA BETA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 4(C8 H15 N O6) FORMUL 4 CU 3(CU 2+) FORMUL 7 BMA 3(C6 H12 O6) FORMUL 10 HOH *311(H2 O) HELIX 1 1 THR A 94 ASP A 98 5 5 HELIX 2 2 THR A 135 GLY A 140 5 6 HELIX 3 3 HIS A 154 TYR A 158 5 5 HELIX 4 4 ASP A 162 SER A 164 5 3 HELIX 5 5 PHE A 290 THR A 294 5 5 HELIX 6 6 VAL A 321 LEU A 325 5 5 HELIX 7 7 PRO A 370 SER A 377 1 8 HELIX 8 8 ILE A 473 ALA A 479 1 7 HELIX 9 9 ASP A 491 ASN A 496 1 6 HELIX 10 10 PRO A 499 LEU A 512 1 14 HELIX 11 11 SER A 513 GLN A 517 5 5 SHEET 1 AA 4 ARG A 43 VAL A 48 0 SHEET 2 AA 4 VAL A 26 VAL A 36 -1 O SER A 32 N LEU A 47 SHEET 3 AA 4 ARG A 64 ASP A 71 1 O GLN A 66 N ALA A 27 SHEET 4 AA 4 ALA A 113 GLN A 119 -1 O PHE A 114 N VAL A 69 SHEET 1 AB 4 ILE A 57 ASN A 60 0 SHEET 2 AB 4 ARG A 142 TYR A 148 1 O PRO A 144 N ILE A 57 SHEET 3 AB 4 GLY A 125 SER A 131 -1 O GLY A 125 N VAL A 147 SHEET 4 AB 4 ILE A 84 HIS A 87 -1 O HIS A 85 N HIS A 130 SHEET 1 AC 6 ALA A 188 ILE A 191 0 SHEET 2 AC 6 VAL A 166 TRP A 172 -1 O ALA A 170 N LEU A 190 SHEET 3 AC 6 ARG A 215 SER A 222 1 O ARG A 219 N ILE A 167 SHEET 4 AC 6 ARG A 263 ASN A 269 -1 O TYR A 264 N LEU A 220 SHEET 5 AC 6 LEU A 238 ALA A 243 -1 O THR A 239 N VAL A 267 SHEET 6 AC 6 VAL A 246 VAL A 253 -1 O VAL A 246 N ALA A 243 SHEET 1 AD 5 VAL A 207 THR A 209 0 SHEET 2 AD 5 SER A 296 ARG A 300 1 O ILE A 298 N ILE A 208 SHEET 3 AD 5 ASN A 276 PRO A 283 -1 O TYR A 277 N LEU A 299 SHEET 4 AD 5 TYR A 229 ILE A 233 -1 O THR A 230 N LEU A 282 SHEET 5 AD 5 LEU A 256 ILE A 258 -1 O LEU A 256 N PHE A 231 SHEET 1 AE 5 LEU A 344 ASN A 347 0 SHEET 2 AE 5 ASP A 399 SER A 403 1 O ASP A 399 N LEU A 344 SHEET 3 AE 5 THR A 456 ARG A 460 -1 O ILE A 457 N ILE A 402 SHEET 4 AE 5 PHE A 424 ARG A 428 -1 O ALA A 425 N ARG A 458 SHEET 5 AE 5 TYR A 442 ARG A 443 -1 O ARG A 443 N PHE A 424 SHEET 1 AF 2 PHE A 350 ALA A 353 0 SHEET 2 AF 2 ASN A 356 ILE A 359 -1 O ASN A 356 N ALA A 353 SHEET 1 AG 5 VAL A 391 LEU A 394 0 SHEET 2 AG 5 ALA A 482 GLU A 487 1 O VAL A 484 N TYR A 392 SHEET 3 AG 5 GLY A 465 CYS A 471 -1 O GLY A 465 N GLU A 487 SHEET 4 AG 5 PRO A 416 LEU A 419 -1 O HIS A 418 N HIS A 470 SHEET 5 AG 5 VAL A 445 SER A 447 -1 O VAL A 446 N PHE A 417 SSBOND 1 CYS A 106 CYS A 506 1555 1555 2.05 SSBOND 2 CYS A 138 CYS A 225 1555 1555 2.00 LINK ND2 ASN A 75 C1 NAG B 1 1555 1555 1.43 LINK ND2 ASN A 454 C1 NAG C 1 1555 1555 1.43 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.43 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.43 LINK ND1 HIS A 87 CU CU A1520 1555 1555 2.18 LINK NE2 HIS A 130 CU CU A1520 1555 1555 2.24 LINK NE2 HIS A 132 CU CU A1519 1555 1555 2.30 LINK ND1 HIS A 415 CU CU A1518 1555 1555 2.04 LINK NE2 HIS A 420 CU CU A1519 1555 1555 2.14 LINK NE2 HIS A 470 CU CU A1519 1555 1555 1.76 LINK SG CYS A 471 CU CU A1518 1555 1555 2.25 LINK NE2 HIS A 472 CU CU A1520 1555 1555 2.17 LINK ND1 HIS A 476 CU CU A1518 1555 1555 2.60 CISPEP 1 GLY A 24 PRO A 25 0 5.36 CISPEP 2 PHE A 52 PRO A 53 0 -3.72 CISPEP 3 LEU A 386 PRO A 387 0 5.21 CISPEP 4 PHE A 413 PRO A 414 0 2.37 CRYST1 56.020 85.390 151.530 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017851 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011711 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006599 0.00000