HEADER HYDROLASE 28-SEP-11 4A2P TITLE STRUCTURE OF DUCK RIG-I HELICASE DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RETINOIC ACID INDUCIBLE PROTEIN I; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HELICASE DOMAIN, RESIDUES 242-794; COMPND 5 SYNONYM: RIG-I; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANAS PLATYRHYNCHOS; SOURCE 3 ORGANISM_TAXID: 8839; SOURCE 4 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 5 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: HIGH FIVE; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PFASTBAC KEYWDS HYDROLASE, SUPERFAMILY 2 RNA HELICASE, ATP AND DSRNA BINDING, KEYWDS 2 ANTIVIRAL SIGNALLING PATHWAY EXPDTA X-RAY DIFFRACTION AUTHOR E.KOWALINSKI,T.LUNARDI,A.A.MCCARTHY,S.CUSACK REVDAT 3 03-APR-19 4A2P 1 SOURCE REVDAT 2 26-OCT-11 4A2P 1 JRNL REVDAT 1 19-OCT-11 4A2P 0 JRNL AUTH E.KOWALINSKI,T.LUNARDI,A.A.MCCARTHY,J.LOUBER,J.BRUNEL, JRNL AUTH 2 B.GRIGOROV,D.GERLIER,S.CUSACK JRNL TITL STRUCTURAL BASIS FOR THE ACTIVATION OF INNATE IMMUNE PATTERN JRNL TITL 2 RECOGNITION RECEPTOR RIG-I BY VIRAL RNA. JRNL REF CELL(CAMBRIDGE,MASS.) V. 147 423 2011 JRNL REFN ISSN 0092-8674 JRNL PMID 22000019 JRNL DOI 10.1016/J.CELL.2011.09.039 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0116 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 12746 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.297 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 646 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 927 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.3420 REMARK 3 BIN FREE R VALUE SET COUNT : 59 REMARK 3 BIN FREE R VALUE : 0.3480 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3852 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 81.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.54000 REMARK 3 B22 (A**2) : -3.54000 REMARK 3 B33 (A**2) : 5.31000 REMARK 3 B12 (A**2) : -1.77000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.500 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.410 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.598 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.901 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3936 ; 0.005 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2693 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5307 ; 0.956 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6603 ; 0.889 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 475 ; 5.166 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 187 ;35.609 ;24.973 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 753 ;17.013 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;13.285 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 616 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4265 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 742 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 4A2P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1290049815. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13392 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.790 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.81 REMARK 200 R MERGE FOR SHELL (I) : 0.71000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12 MG PER ML PROTEIN AND 0.1 M NACL, REMARK 280 0.1M M TRI-SODIUM CITRATE PH 5.6, 12% PEG 4000. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 96.06500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 55.46315 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 16.32667 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 96.06500 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 55.46315 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 16.32667 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 96.06500 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 55.46315 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 16.32667 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 110.92631 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 32.65333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 110.92631 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 32.65333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 110.92631 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 32.65333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 239 REMARK 465 ALA A 240 REMARK 465 MET A 241 REMARK 465 GLU A 242 REMARK 465 THR A 243 REMARK 465 LYS A 244 REMARK 465 LYS A 245 REMARK 465 ASN A 331 REMARK 465 PHE A 332 REMARK 465 SER A 333 REMARK 465 ASN A 334 REMARK 465 VAL A 335 REMARK 465 ALA A 401 REMARK 465 SER A 402 REMARK 465 GLN A 403 REMARK 465 VAL A 494 REMARK 465 ASP A 495 REMARK 465 THR A 496 REMARK 465 LEU A 497 REMARK 465 SER A 498 REMARK 465 GLN A 499 REMARK 465 ASN A 500 REMARK 465 SER A 501 REMARK 465 LYS A 502 REMARK 465 GLN A 525 REMARK 465 LEU A 526 REMARK 465 GLU A 527 REMARK 465 LEU A 662 REMARK 465 MET A 663 REMARK 465 GLY A 664 REMARK 465 ARG A 665 REMARK 465 GLY A 666 REMARK 465 ARG A 667 REMARK 465 ARG A 668 REMARK 465 ASP A 669 REMARK 465 GLN A 670 REMARK 465 THR A 671 REMARK 465 THR A 672 REMARK 465 GLY A 673 REMARK 465 MET A 674 REMARK 465 THR A 675 REMARK 465 LEU A 676 REMARK 465 PRO A 677 REMARK 465 SER A 678 REMARK 465 GLN A 679 REMARK 465 LYS A 680 REMARK 465 GLY A 681 REMARK 465 VAL A 682 REMARK 465 LEU A 683 REMARK 465 ASP A 684 REMARK 465 ALA A 685 REMARK 465 PHE A 686 REMARK 465 LYS A 687 REMARK 465 THR A 688 REMARK 465 SER A 689 REMARK 465 LYS A 690 REMARK 465 ASP A 691 REMARK 465 VAL A 700 REMARK 465 ALA A 701 REMARK 465 ASP A 702 REMARK 465 GLU A 703 REMARK 465 GLY A 704 REMARK 465 ILE A 705 REMARK 465 ASP A 706 REMARK 465 ILE A 707 REMARK 465 VAL A 708 REMARK 465 GLN A 709 REMARK 465 CYS A 710 REMARK 465 ARG A 729 REMARK 465 GLY A 730 REMARK 465 ARG A 731 REMARK 465 GLY A 732 REMARK 465 ARG A 733 REMARK 465 ALA A 734 REMARK 465 ALA A 735 REMARK 465 GLY A 736 REMARK 465 SER A 794 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 492 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER A 493 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 287 44.48 -101.21 REMARK 500 ALA A 290 178.16 66.67 REMARK 500 THR A 364 35.60 -145.90 REMARK 500 THR A 380 78.26 -69.21 REMARK 500 ASN A 383 32.87 -99.81 REMARK 500 ASN A 399 -76.72 -57.46 REMARK 500 VAL A 416 20.64 -141.68 REMARK 500 ASN A 418 40.52 -109.46 REMARK 500 ASN A 447 36.04 -160.68 REMARK 500 ASN A 456 87.18 -59.74 REMARK 500 LEU A 523 -84.32 -49.31 REMARK 500 TYR A 580 53.67 70.96 REMARK 500 ASP A 604 -64.51 -9.87 REMARK 500 GLU A 605 -28.32 76.89 REMARK 500 ASN A 626 80.62 -162.77 REMARK 500 LEU A 654 51.41 -93.99 REMARK 500 GLU A 717 74.11 57.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4A2V RELATED DB: PDB REMARK 900 STRUCTURE OF DUCK RIG-I C-TERMINAL DOMAIN (CTD) REMARK 900 RELATED ID: 4A2X RELATED DB: PDB REMARK 900 STRUCTURE OF DUCK RIG-I C-TERMINAL DOMAIN (CTD) WITH 14-MER DSRNA REMARK 900 RELATED ID: 4A36 RELATED DB: PDB REMARK 900 STRUCTURE OF DUCK RIG-I HELICASE DOMAIN BOUND TO 19 -MER DSRNA AND REMARK 900 ATP TRANSITION STATE ANALOGUE REMARK 900 RELATED ID: 4A2W RELATED DB: PDB REMARK 900 STRUCTURE OF FULL-LENGTH DUCK RIG-I REMARK 900 RELATED ID: 4A2Q RELATED DB: PDB REMARK 900 STRUCTURE OF DUCK RIG-I TANDEM CARDS AND HELICASE DOMAIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 ADDITIONAL GAM AT N-TERMINUS AFTER CLEAVAGE OF HIS-TAG DBREF 4A2P A 242 794 UNP D3TI84 D3TI84_ANAPL 242 794 SEQADV 4A2P GLY A 239 UNP D3TI84 EXPRESSION TAG SEQADV 4A2P ALA A 240 UNP D3TI84 EXPRESSION TAG SEQADV 4A2P MET A 241 UNP D3TI84 EXPRESSION TAG SEQRES 1 A 556 GLY ALA MET GLU THR LYS LYS ALA ARG SER TYR GLN ILE SEQRES 2 A 556 GLU LEU ALA GLN PRO ALA ILE ASN GLY LYS ASN ALA LEU SEQRES 3 A 556 ILE CYS ALA PRO THR GLY SER GLY LYS THR PHE VAL SER SEQRES 4 A 556 ILE LEU ILE CYS GLU HIS HIS PHE GLN ASN MET PRO ALA SEQRES 5 A 556 GLY ARG LYS ALA LYS VAL VAL PHE LEU ALA THR LYS VAL SEQRES 6 A 556 PRO VAL TYR GLU GLN GLN LYS ASN VAL PHE LYS HIS HIS SEQRES 7 A 556 PHE GLU ARG GLN GLY TYR SER VAL GLN GLY ILE SER GLY SEQRES 8 A 556 GLU ASN PHE SER ASN VAL SER VAL GLU LYS VAL ILE GLU SEQRES 9 A 556 ASP SER ASP ILE ILE VAL VAL THR PRO GLN ILE LEU VAL SEQRES 10 A 556 ASN SER PHE GLU ASP GLY THR LEU THR SER LEU SER ILE SEQRES 11 A 556 PHE THR LEU MET ILE PHE ASP GLU CYS HIS ASN THR THR SEQRES 12 A 556 GLY ASN HIS PRO TYR ASN VAL LEU MET THR ARG TYR LEU SEQRES 13 A 556 GLU GLN LYS PHE ASN SER ALA SER GLN LEU PRO GLN ILE SEQRES 14 A 556 LEU GLY LEU THR ALA SER VAL GLY VAL GLY ASN ALA LYS SEQRES 15 A 556 ASN ILE GLU GLU THR ILE GLU HIS ILE CYS SER LEU CYS SEQRES 16 A 556 SER TYR LEU ASP ILE GLN ALA ILE SER THR VAL ARG GLU SEQRES 17 A 556 ASN ILE GLN GLU LEU GLN ARG PHE MET ASN LYS PRO GLU SEQRES 18 A 556 ILE ASP VAL ARG LEU VAL LYS ARG ARG ILE HIS ASN PRO SEQRES 19 A 556 PHE ALA ALA ILE ILE SER ASN LEU MET SER GLU THR GLU SEQRES 20 A 556 ALA LEU MET ARG THR ILE TYR SER VAL ASP THR LEU SER SEQRES 21 A 556 GLN ASN SER LYS LYS ASP PHE GLY THR GLN ASN TYR GLU SEQRES 22 A 556 HIS TRP ILE VAL VAL THR GLN ARG LYS CYS ARG LEU LEU SEQRES 23 A 556 GLN LEU GLU ASP LYS GLU GLU GLU SER ARG ILE CYS ARG SEQRES 24 A 556 ALA LEU PHE ILE CYS THR GLU HIS LEU ARG LYS TYR ASN SEQRES 25 A 556 ASP ALA LEU ILE ILE SER GLU ASP ALA ARG ILE ILE ASP SEQRES 26 A 556 ALA LEU SER TYR LEU THR GLU PHE PHE THR ASN VAL LYS SEQRES 27 A 556 ASN GLY PRO TYR THR GLU LEU GLU GLN HIS LEU THR ALA SEQRES 28 A 556 LYS PHE GLN GLU LYS GLU PRO GLU LEU ILE ALA LEU SER SEQRES 29 A 556 LYS ASP GLU THR ASN GLU ASN PRO LYS LEU GLU GLU LEU SEQRES 30 A 556 VAL CYS ILE LEU ASP ASP ALA TYR ARG TYR ASN PRO GLN SEQRES 31 A 556 THR ARG THR LEU LEU PHE ALA LYS THR ARG ALA LEU VAL SEQRES 32 A 556 SER ALA LEU LYS LYS CYS MET GLU GLU ASN PRO ILE LEU SEQRES 33 A 556 ASN TYR ILE LYS PRO GLY VAL LEU MET GLY ARG GLY ARG SEQRES 34 A 556 ARG ASP GLN THR THR GLY MET THR LEU PRO SER GLN LYS SEQRES 35 A 556 GLY VAL LEU ASP ALA PHE LYS THR SER LYS ASP ASN ARG SEQRES 36 A 556 LEU LEU ILE ALA THR SER VAL ALA ASP GLU GLY ILE ASP SEQRES 37 A 556 ILE VAL GLN CYS ASN LEU VAL VAL LEU TYR GLU TYR SER SEQRES 38 A 556 GLY ASN VAL THR LYS MET ILE GLN VAL ARG GLY ARG GLY SEQRES 39 A 556 ARG ALA ALA GLY SER LYS CYS ILE LEU VAL THR SER LYS SEQRES 40 A 556 THR GLU VAL VAL GLU ASN GLU LYS CYS ASN ARG TYR LYS SEQRES 41 A 556 GLU GLU MET MET ASN LYS ALA VAL GLU LYS ILE GLN LYS SEQRES 42 A 556 TRP ASP GLU GLU THR PHE ALA LYS LYS ILE HIS ASN LEU SEQRES 43 A 556 GLN MET LYS GLU ARG VAL LEU ARG ASP SER HELIX 1 1 ARG A 247 ASN A 259 1 13 HELIX 2 2 GLY A 272 ASN A 287 1 16 HELIX 3 3 LYS A 302 GLU A 318 1 17 HELIX 4 4 ARG A 319 GLY A 321 5 3 HELIX 5 5 SER A 336 SER A 344 1 9 HELIX 6 6 THR A 350 ASP A 360 1 11 HELIX 7 7 CYS A 377 THR A 380 5 4 HELIX 8 8 HIS A 384 ASN A 399 1 16 HELIX 9 9 ASN A 421 ASP A 437 1 17 HELIX 10 10 ASN A 447 MET A 455 1 9 HELIX 11 11 ASN A 471 TYR A 492 1 22 HELIX 12 12 THR A 507 LEU A 524 1 18 HELIX 13 13 ASP A 528 ALA A 559 1 32 HELIX 14 14 ARG A 560 GLY A 578 1 19 HELIX 15 15 THR A 581 GLU A 593 1 13 HELIX 16 16 LYS A 594 ASP A 604 1 11 HELIX 17 17 ASN A 609 ASN A 626 1 18 HELIX 18 18 THR A 637 GLU A 649 1 13 HELIX 19 19 PRO A 652 TYR A 656 5 5 HELIX 20 20 ASN A 721 VAL A 728 1 8 HELIX 21 21 LYS A 745 LYS A 771 1 27 HELIX 22 22 ASP A 773 LEU A 791 1 19 SHEET 1 AA 7 VAL A 324 GLY A 326 0 SHEET 2 AA 7 ILE A 346 VAL A 349 1 O ILE A 346 N GLN A 325 SHEET 3 AA 7 VAL A 296 LEU A 299 1 O VAL A 296 N ILE A 347 SHEET 4 AA 7 LEU A 371 ASP A 375 1 O LEU A 371 N VAL A 297 SHEET 5 AA 7 GLN A 406 THR A 411 1 O GLN A 406 N MET A 372 SHEET 6 AA 7 ALA A 263 CYS A 266 1 O ALA A 263 N GLY A 409 SHEET 7 AA 7 ALA A 440 SER A 442 1 O ALA A 440 N LEU A 264 SHEET 1 AB 6 ILE A 460 LEU A 464 0 SHEET 2 AB 6 CYS A 739 THR A 743 1 O CYS A 739 N ASP A 461 SHEET 3 AB 6 LEU A 712 TYR A 716 1 O VAL A 713 N ILE A 740 SHEET 4 AB 6 THR A 631 ALA A 635 1 O LEU A 632 N VAL A 714 SHEET 5 AB 6 LEU A 694 THR A 698 1 O LEU A 695 N LEU A 633 SHEET 6 AB 6 PRO A 659 GLY A 660 1 O GLY A 660 N ILE A 696 CRYST1 192.130 192.130 48.980 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005205 0.003005 0.000000 0.00000 SCALE2 0.000000 0.006010 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020416 0.00000