HEADER ALLERGEN 18-NOV-11 4A81 TITLE CRYSTAL STRUCTURE OF MAJOR BIRCH POLLEN ALLERGEN BET V 1 A IN TERNARY TITLE 2 COMPLEX WITH 8-ANILINONAPHTHALENE-1-SULFONATE (ANS) AND DEOXYCHOLIC TITLE 3 ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR POLLEN ALLERGEN BET V 1-A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BET V 1 A, ALLERGEN BET V I-A, BET V 1-A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BETULA PENDULA; SOURCE 3 ORGANISM_COMMON: EUROPEAN WHITE BIRCH; SOURCE 4 ORGANISM_TAXID: 3505; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET-28B KEYWDS ALLERGEN, PR-10 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.KOFLER,H.BRANDSTETTER REVDAT 4 20-DEC-23 4A81 1 REMARK LINK REVDAT 3 05-JUL-17 4A81 1 REMARK REVDAT 2 15-AUG-12 4A81 1 JRNL REVDAT 1 30-MAY-12 4A81 0 JRNL AUTH S.KOFLER,C.ASAM,U.ECKHARD,M.WALLNER,F.FERREIRA, JRNL AUTH 2 H.BRANDSTETTER JRNL TITL CRYSTALLOGRAPHICALLY MAPPED LIGAND BINDING DIFFERS IN HIGH JRNL TITL 2 AND LOW IGE BINDING ISOFORMS OF BIRCH POLLEN ALLERGEN BET V JRNL TITL 3 1. JRNL REF J.MOL.BIOL. V. 422 109 2012 JRNL REFN ISSN 0022-2836 JRNL PMID 22634284 JRNL DOI 10.1016/J.JMB.2012.05.016 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 88.1 REMARK 3 NUMBER OF REFLECTIONS : 7189 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 366 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 506 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.32 REMARK 3 BIN R VALUE (WORKING SET) : 0.1510 REMARK 3 BIN FREE R VALUE SET COUNT : 31 REMARK 3 BIN FREE R VALUE : 0.2710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1226 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 63 REMARK 3 SOLVENT ATOMS : 108 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.15000 REMARK 3 B22 (A**2) : 1.04000 REMARK 3 B33 (A**2) : -0.88000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.06000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.340 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.222 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.136 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.985 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1338 ; 0.016 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 903 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1823 ; 1.851 ; 2.027 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2224 ; 0.927 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 162 ; 6.235 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 57 ;37.310 ;25.789 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 218 ;14.817 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ;29.126 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 205 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1447 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 250 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 372 ; 0.244 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 932 ; 0.196 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 662 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 652 ; 0.094 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 50 ; 0.198 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.054 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 2 ; 0.102 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 45 ; 0.317 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 36 ; 0.168 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.246 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 792 ; 1.135 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1281 ; 1.997 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 523 ; 3.085 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 507 ; 4.861 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY. REMARK 4 REMARK 4 4A81 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1290050357. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JAN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7579 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 37.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.3 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.16000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4A80 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 27.91000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 126 CB CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 23 -67.40 -96.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2020 DISTANCE = 6.45 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1164 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 5 OH REMARK 620 2 SER A 39 O 142.8 REMARK 620 3 VAL A 128 O 87.1 117.8 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1160 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DXC A 1161 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2AN A 1162 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 1163 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1164 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FSK RELATED DB: PDB REMARK 900 COMPLEX FORMATION BETWEEN A FAB FRAGMENT OF A MONOCLONALIGG REMARK 900 ANTIBODY AND THE MAJOR ALLERGEN FROM BIRCH POLLEN BET V1 REMARK 900 RELATED ID: 4A8G RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MAJOR BIRCH POLLEN ALLERGEN BET V 1 A IN REMARK 900 COMPLEX WITH DIMETHYLBENZYLAMMONIUM PROPANE SULFONATE REMARK 900 RELATED ID: 1B6F RELATED DB: PDB REMARK 900 BIRCH POLLEN ALLERGEN BET V 1 REMARK 900 RELATED ID: 4A84 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MAJOR BIRCH POLLEN ALLERGEN BET V 1 A F30V REMARK 900 MUTANT IN COMPLEX WITH DEOXYCHOLATE. REMARK 900 RELATED ID: 1BV1 RELATED DB: PDB REMARK 900 BIRCH POLLEN ALLERGEN BET V 1 REMARK 900 RELATED ID: 4A80 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MAJOR BIRCH POLLEN ALLERGEN BET V 1 A IN REMARK 900 COMPLEX WITH 8-ANILINONAPHTHALENE-1-SULFONATE (ANS) REMARK 900 RELATED ID: 4A85 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MAJOR BIRCH POLLEN ALLERGEN BET V 1 A IN REMARK 900 COMPLEX WITH KINETIN. REMARK 900 RELATED ID: 4A88 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NATIVE MAJOR BIRCH POLLEN ALLERGEN BET V 1 REMARK 900 ISOFORM A REMARK 900 RELATED ID: 1LLT RELATED DB: PDB REMARK 900 BIRCH POLLEN ALLERGEN BET V 1 MUTANT E45S REMARK 900 RELATED ID: 1QMR RELATED DB: PDB REMARK 900 BIRCH POLLEN ALLERGEN BET V 1 MUTANT N28T, K32Q, E45S, P108G REMARK 900 RELATED ID: 4A86 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MAJOR BIRCH POLLEN ALLERGEN BET V 1 A IN REMARK 900 TERNARY COMPLEX WITH KINETIN AND 8- ANILINONAPHTHALENE-1-SULFONATE REMARK 900 (ANS) REMARK 900 RELATED ID: 1BTV RELATED DB: PDB REMARK 900 STRUCTURE OF BET V 1, NMR, 20 STRUCTURES REMARK 900 RELATED ID: 4A83 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MAJOR BIRCH POLLEN ALLERGEN BET V 1 A IN REMARK 900 COMPLEX WITH DEOXYCHOLATE. REMARK 900 RELATED ID: 4A87 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MAJOR BIRCH POLLEN ALLERGEN BET V 1 A IN REMARK 900 COMPLEX NARINGENIN. REMARK 999 REMARK 999 SEQUENCE REMARK 999 STARTING METHIONINE OF UNIPROT SEQUENCE IS CLEAVED. DBREF 4A81 A 1 159 UNP P15494 BEV1A_BETPN 2 160 SEQRES 1 A 159 GLY VAL PHE ASN TYR GLU THR GLU THR THR SER VAL ILE SEQRES 2 A 159 PRO ALA ALA ARG LEU PHE LYS ALA PHE ILE LEU ASP GLY SEQRES 3 A 159 ASP ASN LEU PHE PRO LYS VAL ALA PRO GLN ALA ILE SER SEQRES 4 A 159 SER VAL GLU ASN ILE GLU GLY ASN GLY GLY PRO GLY THR SEQRES 5 A 159 ILE LYS LYS ILE SER PHE PRO GLU GLY PHE PRO PHE LYS SEQRES 6 A 159 TYR VAL LYS ASP ARG VAL ASP GLU VAL ASP HIS THR ASN SEQRES 7 A 159 PHE LYS TYR ASN TYR SER VAL ILE GLU GLY GLY PRO ILE SEQRES 8 A 159 GLY ASP THR LEU GLU LYS ILE SER ASN GLU ILE LYS ILE SEQRES 9 A 159 VAL ALA THR PRO ASP GLY GLY SER ILE LEU LYS ILE SER SEQRES 10 A 159 ASN LYS TYR HIS THR LYS GLY ASP HIS GLU VAL LYS ALA SEQRES 11 A 159 GLU GLN VAL LYS ALA SER LYS GLU MET GLY GLU THR LEU SEQRES 12 A 159 LEU ARG ALA VAL GLU SER TYR LEU LEU ALA HIS SER ASP SEQRES 13 A 159 ALA TYR ASN HET SO4 A1160 5 HET DXC A1161 28 HET 2AN A1162 21 HET MPD A1163 16 HET NA A1164 1 HETNAM SO4 SULFATE ION HETNAM DXC (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID HETNAM 2AN 8-ANILINO-1-NAPHTHALENE SULFONATE HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM NA SODIUM ION HETSYN DXC DEOXYCHOLIC ACID FORMUL 2 SO4 O4 S 2- FORMUL 3 DXC C24 H40 O4 FORMUL 4 2AN C16 H13 N O3 S FORMUL 5 MPD C6 H14 O2 FORMUL 6 NA NA 1+ FORMUL 7 HOH *108(H2 O) HELIX 1 1 PRO A 14 ILE A 23 1 10 HELIX 2 2 ASP A 25 ALA A 34 1 10 HELIX 3 3 LYS A 129 HIS A 154 1 26 SHEET 1 AA 7 VAL A 2 SER A 11 0 SHEET 2 AA 7 SER A 112 HIS A 121 -1 O SER A 112 N SER A 11 SHEET 3 AA 7 LYS A 97 ALA A 106 -1 O LYS A 97 N HIS A 121 SHEET 4 AA 7 LYS A 80 GLY A 88 -1 O TYR A 81 N ILE A 102 SHEET 5 AA 7 TYR A 66 ASP A 75 -1 O LYS A 68 N ILE A 86 SHEET 6 AA 7 ILE A 53 SER A 57 -1 O LYS A 54 N ASP A 69 SHEET 7 AA 7 SER A 40 GLU A 45 -1 O SER A 40 N SER A 57 LINK OH TYR A 5 NA NA A1164 1555 1555 2.27 LINK O SER A 39 NA NA A1164 1455 1555 2.92 LINK O VAL A 128 NA NA A1164 1555 1555 2.40 SITE 1 AC1 2 LYS A 134 GLU A 138 SITE 1 AC2 18 PHE A 22 ILE A 23 GLY A 26 ASP A 27 SITE 2 AC2 18 LYS A 54 ILE A 56 VAL A 67 ASP A 69 SITE 3 AC2 18 TYR A 81 TYR A 83 ASN A 100 ASN A 118 SITE 4 AC2 18 SER A 136 MET A 139 2AN A1162 MPD A1163 SITE 5 AC2 18 HOH A2057 HOH A2090 SITE 1 AC3 13 THR A 7 THR A 9 PHE A 22 TYR A 83 SITE 2 AC3 13 ILE A 102 ILE A 116 ASN A 118 VAL A 133 SITE 3 AC3 13 SER A 136 LYS A 137 GLY A 140 GLU A 141 SITE 4 AC3 13 DXC A1161 SITE 1 AC4 9 PHE A 58 PHE A 64 PRO A 90 ILE A 98 SITE 2 AC4 9 GLN A 132 SER A 136 MET A 139 DXC A1161 SITE 3 AC4 9 HOH A2090 SITE 1 AC5 4 TYR A 5 SER A 39 SER A 40 VAL A 128 CRYST1 32.600 55.820 37.850 90.00 93.04 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030675 0.000000 0.001629 0.00000 SCALE2 0.000000 0.017915 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026457 0.00000