HEADER PROTEIN TRANSPORT 15-DEC-11 4ACK TITLE 3D STRUCTURE OF DOTU FROM FRANCISELLA NOVICIDA COMPND MOL_ID: 1; COMPND 2 MOLECULE: TSSL; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CYTOPLASMIC DOMAIN, RESIDUES 1-185; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FRANCISELLA NOVICIDA; SOURCE 3 ORGANISM_TAXID: 401614; SOURCE 4 STRAIN: U112; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET28 KEYWDS PROTEIN TRANSPORT, T6SS, MICROBIAL SURFACE STRUCTURES, VIRULENCE KEYWDS 2 FACTOR EXPDTA X-RAY DIFFRACTION AUTHOR C.S.ROBB,F.E.NANO,A.B.BORASTON REVDAT 3 08-MAY-24 4ACK 1 REMARK REVDAT 2 06-JUN-12 4ACK 1 JRNL REMARK REVDAT 1 25-APR-12 4ACK 0 JRNL AUTH C.S.ROBB,F.E.NANO,A.B.BORASTON JRNL TITL THE STRUCTURE OF THE CONSERVED TYPE SIX SECRETION PROTEIN JRNL TITL 2 TSSL (DOTU) FROM FRANCISELLA NOVICIDA JRNL REF J.MOL.BIOL. V. 419 277 2012 JRNL REFN ISSN 0022-2836 JRNL PMID 22504227 JRNL DOI 10.1016/J.JMB.2012.04.003 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 22858 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1227 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.21 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1726 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.2390 REMARK 3 BIN FREE R VALUE SET COUNT : 90 REMARK 3 BIN FREE R VALUE : 0.3450 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2576 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 139 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.46000 REMARK 3 B22 (A**2) : 2.42000 REMARK 3 B33 (A**2) : -1.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.55000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.206 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.191 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.127 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.774 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2679 ; 0.023 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3606 ; 1.778 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 308 ; 6.140 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 139 ;42.064 ;24.892 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 498 ;17.211 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;18.775 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 393 ; 0.125 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1993 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1539 ; 1.317 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2502 ; 2.401 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1140 ; 3.363 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1103 ; 5.242 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. RESIDUES A23-25 B24 B113-114 ARE DISORDERED REMARK 4 REMARK 4 4ACK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1290050729. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-APR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.920 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24116 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 65.990 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIRAS REMARK 200 SOFTWARE USED: AUTOSHARP REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.115 M KBR, 0.1 M TRIS, PH 8.5, 20% REMARK 280 PEG 3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 42.92000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 23 REMARK 465 ASN A 24 REMARK 465 ASP A 25 REMARK 465 ILE A 156 REMARK 465 GLU A 157 REMARK 465 ASN A 158 REMARK 465 SER A 159 REMARK 465 THR A 160 REMARK 465 ILE A 161 REMARK 465 ASP A 162 REMARK 465 SER A 163 REMARK 465 VAL A 164 REMARK 465 ASN A 165 REMARK 465 PHE A 166 REMARK 465 ILE A 167 REMARK 465 ASP A 168 REMARK 465 ILE A 169 REMARK 465 PRO A 170 REMARK 465 VAL A 171 REMARK 465 ASN A 172 REMARK 465 SER A 173 REMARK 465 PRO A 174 REMARK 465 PRO A 175 REMARK 465 LEU A 176 REMARK 465 SER A 177 REMARK 465 ARG A 178 REMARK 465 LYS A 179 REMARK 465 TYR A 180 REMARK 465 SER A 181 REMARK 465 LYS A 182 REMARK 465 THR A 183 REMARK 465 LEU A 184 REMARK 465 LYS A 185 REMARK 465 ASN B 24 REMARK 465 GLU B 113 REMARK 465 ASN B 114 REMARK 465 GLU B 157 REMARK 465 ASN B 158 REMARK 465 SER B 159 REMARK 465 THR B 160 REMARK 465 ILE B 161 REMARK 465 ASP B 162 REMARK 465 SER B 163 REMARK 465 VAL B 164 REMARK 465 ASN B 165 REMARK 465 PHE B 166 REMARK 465 ILE B 167 REMARK 465 ASP B 168 REMARK 465 ILE B 169 REMARK 465 PRO B 170 REMARK 465 VAL B 171 REMARK 465 ASN B 172 REMARK 465 SER B 173 REMARK 465 PRO B 174 REMARK 465 PRO B 175 REMARK 465 LEU B 176 REMARK 465 SER B 177 REMARK 465 ARG B 178 REMARK 465 LYS B 179 REMARK 465 TYR B 180 REMARK 465 SER B 181 REMARK 465 LYS B 182 REMARK 465 THR B 183 REMARK 465 LEU B 184 REMARK 465 LYS B 185 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 18 NE CZ NH1 NH2 REMARK 470 GLU A 22 CG CD OE1 OE2 REMARK 470 ASN A 26 CG OD1 ND2 REMARK 470 LYS A 79 CG CD CE NZ REMARK 470 MET B 1 CG SD CE REMARK 470 ASP B 23 CG OD1 OD2 REMARK 470 ASP B 25 CG OD1 OD2 REMARK 470 LYS B 79 CG CD CE NZ REMARK 470 ILE B 115 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 86 99.47 -160.89 REMARK 500 ASN A 114 49.03 -84.96 REMARK 500 ASN A 139 98.72 -162.38 REMARK 500 LYS A 154 0.55 -67.29 REMARK 500 LYS B 79 60.66 -113.29 REMARK 500 ASN B 139 75.36 -161.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A 1156 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1157 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR B 1157 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR B 1158 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1159 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1160 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1161 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1162 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1163 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ACL RELATED DB: PDB REMARK 900 3D STRUCTURE OF DOTU FROM FRANCISELLA NOVICIDA DBREF 4ACK A 1 185 UNP A0Q7H7 A0Q7H7_FRATN 1 185 DBREF 4ACK B 1 185 UNP A0Q7H7 A0Q7H7_FRATN 1 185 SEQRES 1 A 185 MET LYS ASP PHE LYS GLU ILE GLU ILE ILE LEU ASP ILE SEQRES 2 A 185 ILE LYS THR THR ARG GLU ILE ILE GLU ASP ASN ASP ASN SEQRES 3 A 185 ASP ASN GLU LYS ILE SER TYR HIS ARG ASN ASN ILE ARG SEQRES 4 A 185 LYS SER ILE PHE PHE LEU GLN GLU GLU LEU LEU GLU LYS SEQRES 5 A 185 TYR SER GLU THR VAL CYS LYS TYR ILE VAL PHE PRO LEU SEQRES 6 A 185 LEU ALA TYR VAL ASP GLU LYS LEU MET LEU LEU ARG GLU SEQRES 7 A 185 LYS SER ALA SER ASN ILE SER TRP SER LEU LEU GLN LEU SEQRES 8 A 185 GLU TYR TYR ASP ARG LYS ASP GLY GLY GLU TYR VAL PHE SEQRES 9 A 185 GLU ILE THR ASP ASN ILE LEU SER GLU ASN ILE TYR PRO SEQRES 10 A 185 GLN ILE CYS TYR GLN THR ILE SER LEU ILE LEU HIS ASN SEQRES 11 A 185 ASP PHE TYR GLY LYS TYR TYR ASP ASN ILE TYR ASN HIS SEQRES 12 A 185 SER PHE LEU ALA TYR LYS LYS GLU ILE ASP LYS HIS ILE SEQRES 13 A 185 GLU ASN SER THR ILE ASP SER VAL ASN PHE ILE ASP ILE SEQRES 14 A 185 PRO VAL ASN SER PRO PRO LEU SER ARG LYS TYR SER LYS SEQRES 15 A 185 THR LEU LYS SEQRES 1 B 185 MET LYS ASP PHE LYS GLU ILE GLU ILE ILE LEU ASP ILE SEQRES 2 B 185 ILE LYS THR THR ARG GLU ILE ILE GLU ASP ASN ASP ASN SEQRES 3 B 185 ASP ASN GLU LYS ILE SER TYR HIS ARG ASN ASN ILE ARG SEQRES 4 B 185 LYS SER ILE PHE PHE LEU GLN GLU GLU LEU LEU GLU LYS SEQRES 5 B 185 TYR SER GLU THR VAL CYS LYS TYR ILE VAL PHE PRO LEU SEQRES 6 B 185 LEU ALA TYR VAL ASP GLU LYS LEU MET LEU LEU ARG GLU SEQRES 7 B 185 LYS SER ALA SER ASN ILE SER TRP SER LEU LEU GLN LEU SEQRES 8 B 185 GLU TYR TYR ASP ARG LYS ASP GLY GLY GLU TYR VAL PHE SEQRES 9 B 185 GLU ILE THR ASP ASN ILE LEU SER GLU ASN ILE TYR PRO SEQRES 10 B 185 GLN ILE CYS TYR GLN THR ILE SER LEU ILE LEU HIS ASN SEQRES 11 B 185 ASP PHE TYR GLY LYS TYR TYR ASP ASN ILE TYR ASN HIS SEQRES 12 B 185 SER PHE LEU ALA TYR LYS LYS GLU ILE ASP LYS HIS ILE SEQRES 13 B 185 GLU ASN SER THR ILE ASP SER VAL ASN PHE ILE ASP ILE SEQRES 14 B 185 PRO VAL ASN SER PRO PRO LEU SER ARG LYS TYR SER LYS SEQRES 15 B 185 THR LEU LYS HET BR A1156 1 HET EDO A1157 4 HET BR A1158 1 HET BR B1157 1 HET BR B1158 1 HET EDO B1159 4 HET EDO B1160 4 HET EDO B1161 4 HET EDO B1162 4 HET EDO B1163 4 HETNAM BR BROMIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 BR 4(BR 1-) FORMUL 4 EDO 6(C2 H6 O2) FORMUL 13 HOH *139(H2 O) HELIX 1 1 ASP A 3 ILE A 21 1 19 HELIX 2 2 GLU A 29 TYR A 53 1 25 HELIX 3 3 SER A 54 SER A 80 1 27 HELIX 4 4 LEU A 88 ASP A 95 1 8 HELIX 5 5 ASP A 98 GLU A 113 1 16 HELIX 6 6 PRO A 117 ASN A 130 1 14 HELIX 7 7 TYR A 133 TYR A 137 5 5 HELIX 8 8 ASN A 142 LYS A 154 1 13 HELIX 9 9 ASP B 3 ASP B 23 1 21 HELIX 10 10 ASP B 27 TYR B 53 1 27 HELIX 11 11 SER B 54 LYS B 79 1 26 HELIX 12 12 LEU B 88 ASP B 95 1 8 HELIX 13 13 ASP B 98 SER B 112 1 15 HELIX 14 14 PRO B 117 ASN B 130 1 14 HELIX 15 15 TYR B 133 TYR B 137 5 5 HELIX 16 16 ASN B 142 ILE B 156 1 15 SITE 1 AC1 2 THR A 16 SER A 41 SITE 1 AC2 2 LYS A 135 HOH A2023 SITE 1 AC3 2 LYS B 2 HOH B2061 SITE 1 AC4 3 ARG B 77 SER B 80 SER B 82 SITE 1 AC5 7 ASP A 138 ASN A 139 SER B 87 LEU B 88 SITE 2 AC5 7 LEU B 91 HOH B2046 HOH B2083 SITE 1 AC6 3 LEU B 128 HIS B 129 LYS B 149 SITE 1 AC7 5 TYR A 141 ARG B 39 ASN B 139 ILE B 140 SITE 2 AC7 5 TYR B 141 SITE 1 AC8 5 ARG B 39 PHE B 43 GLN B 46 TYR B 93 SITE 2 AC8 5 HIS B 143 SITE 1 AC9 5 ARG B 96 ASP B 98 GLU B 101 TYR B 102 SITE 2 AC9 5 GLU B 105 CRYST1 39.660 85.840 67.710 90.00 102.93 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025214 0.000000 0.005789 0.00000 SCALE2 0.000000 0.011650 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015153 0.00000