data_4AE4 # _entry.id 4AE4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4AE4 PDBE EBI-49295 WWPDB D_1290049295 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1WGN _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'SOLUTION STRUCTURE OF UBA DOMAIN OF HUMAN UBIQUITINASSOCIATED PROTEIN 1 (UBAP1)' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4AE4 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-01-06 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Agromayor, M.' 1 ? 'Soler, N.' 2 ? 'Caballe, A.' 3 ? 'Kueck, T.' 4 ? 'Freund, S.M.' 5 ? 'Allen, M.D.' 6 ? 'Bycroft, M.' 7 ? 'Perisic, O.' 8 ? 'Ye, Y.' 9 ? 'McDonald, B.' 10 ? 'Scheel, H.' 11 ? 'Hofmann, K.' 12 ? 'Neil, S.J.D.' 13 ? 'Martin-Serrano, J.' 14 ? 'Williams, R.L.' 15 ? # _citation.id primary _citation.title 'The UBAP1 subunit of ESCRT-I interacts with ubiquitin via a SOUBA domain.' _citation.journal_abbrev Structure _citation.journal_volume 20 _citation.page_first 414 _citation.page_last 428 _citation.year 2012 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 1878-4186 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22405001 _citation.pdbx_database_id_DOI 10.1016/j.str.2011.12.013 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Agromayor, M.' 1 primary 'Soler, N.' 2 primary 'Caballe, A.' 3 primary 'Kueck, T.' 4 primary 'Freund, S.M.' 5 primary 'Allen, M.D.' 6 primary 'Bycroft, M.' 7 primary 'Perisic, O.' 8 primary 'Ye, Y.' 9 primary 'McDonald, B.' 10 primary 'Scheel, H.' 11 primary 'Hofmann, K.' 12 primary 'Neil, S.J.' 13 primary 'Martin-Serrano, J.' 14 primary 'Williams, R.L.' 15 # _cell.entry_id 4AE4 _cell.length_a 34.404 _cell.length_b 43.480 _cell.length_c 59.413 _cell.angle_alpha 102.58 _cell.angle_beta 96.47 _cell.angle_gamma 113.24 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AE4 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'UBIQUITIN-ASSOCIATED PROTEIN 1' 13800.384 1 ? YES 'SOUBA DOMAIN, RESIDUES 389-502' ? 2 polymer man 'UBIQUITIN-ASSOCIATED PROTEIN 1' 13832.384 1 ? YES 'SOUBA DOMAIN, RESIDUES 389-502' '2 OXIDIZED SELENOMETHIONINES, B 402 AND B 449' 3 non-polymer syn '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' 207.290 2 ? ? ? ? 4 non-polymer syn 'POTASSIUM ION' 39.098 4 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 7 water nat water 18.015 242 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'UBAP-1, UBAP1, NASOPHARYNGEAL CARCINOMA-ASSOCIATED GENE 20 PROTEIN' 2 'UBAP-1, UBAP1, NASOPHARYNGEAL CARCINOMA-ASSOCIATED GENE 20 PROTEIN' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;GSH(MSE)SPSERQCVETVVN(MSE)GYSYECVLRA(MSE)KAAGANIEQILDYLFAHGQLCEKGFDPLLVEEALE (MSE)HQCSEEK(MSE)(MSE)EFLQL(MSE)SKFKE(MSE)GFELKDIKEVLLLHNNDQDNALEDL(MSE)ARAGAS ; ;GSHMSPSERQCVETVVNMGYSYECVLRAMKAAGANIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLM SKFKEMGFELKDIKEVLLLHNNDQDNALEDLMARAGAS ; A ? 2 'polypeptide(L)' no yes ;GSH(MSE)SPSERQCVETVVN(MSO)GYSYECVLRA(MSE)KAAGANIEQILDYLFAHGQLCEKGFDPLLVEEALE (MSO)HQCSEEK(MSE)(MSE)EFLQL(MSE)SKFKE(MSE)GFELKDIKEVLLLHNNDQDNALEDL(MSE)ARAGAS ; ;GSHMSPSERQCVETVVNMGYSYECVLRAMKAAGANIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLM SKFKEMGFELKDIKEVLLLHNNDQDNALEDLMARAGAS ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MSE n 1 5 SER n 1 6 PRO n 1 7 SER n 1 8 GLU n 1 9 ARG n 1 10 GLN n 1 11 CYS n 1 12 VAL n 1 13 GLU n 1 14 THR n 1 15 VAL n 1 16 VAL n 1 17 ASN n 1 18 MSE n 1 19 GLY n 1 20 TYR n 1 21 SER n 1 22 TYR n 1 23 GLU n 1 24 CYS n 1 25 VAL n 1 26 LEU n 1 27 ARG n 1 28 ALA n 1 29 MSE n 1 30 LYS n 1 31 ALA n 1 32 ALA n 1 33 GLY n 1 34 ALA n 1 35 ASN n 1 36 ILE n 1 37 GLU n 1 38 GLN n 1 39 ILE n 1 40 LEU n 1 41 ASP n 1 42 TYR n 1 43 LEU n 1 44 PHE n 1 45 ALA n 1 46 HIS n 1 47 GLY n 1 48 GLN n 1 49 LEU n 1 50 CYS n 1 51 GLU n 1 52 LYS n 1 53 GLY n 1 54 PHE n 1 55 ASP n 1 56 PRO n 1 57 LEU n 1 58 LEU n 1 59 VAL n 1 60 GLU n 1 61 GLU n 1 62 ALA n 1 63 LEU n 1 64 GLU n 1 65 MSE n 1 66 HIS n 1 67 GLN n 1 68 CYS n 1 69 SER n 1 70 GLU n 1 71 GLU n 1 72 LYS n 1 73 MSE n 1 74 MSE n 1 75 GLU n 1 76 PHE n 1 77 LEU n 1 78 GLN n 1 79 LEU n 1 80 MSE n 1 81 SER n 1 82 LYS n 1 83 PHE n 1 84 LYS n 1 85 GLU n 1 86 MSE n 1 87 GLY n 1 88 PHE n 1 89 GLU n 1 90 LEU n 1 91 LYS n 1 92 ASP n 1 93 ILE n 1 94 LYS n 1 95 GLU n 1 96 VAL n 1 97 LEU n 1 98 LEU n 1 99 LEU n 1 100 HIS n 1 101 ASN n 1 102 ASN n 1 103 ASP n 1 104 GLN n 1 105 ASP n 1 106 ASN n 1 107 ALA n 1 108 LEU n 1 109 GLU n 1 110 ASP n 1 111 LEU n 1 112 MSE n 1 113 ALA n 1 114 ARG n 1 115 ALA n 1 116 GLY n 1 117 ALA n 1 118 SER n 2 1 GLY n 2 2 SER n 2 3 HIS n 2 4 MSE n 2 5 SER n 2 6 PRO n 2 7 SER n 2 8 GLU n 2 9 ARG n 2 10 GLN n 2 11 CYS n 2 12 VAL n 2 13 GLU n 2 14 THR n 2 15 VAL n 2 16 VAL n 2 17 ASN n 2 18 MSO n 2 19 GLY n 2 20 TYR n 2 21 SER n 2 22 TYR n 2 23 GLU n 2 24 CYS n 2 25 VAL n 2 26 LEU n 2 27 ARG n 2 28 ALA n 2 29 MSE n 2 30 LYS n 2 31 ALA n 2 32 ALA n 2 33 GLY n 2 34 ALA n 2 35 ASN n 2 36 ILE n 2 37 GLU n 2 38 GLN n 2 39 ILE n 2 40 LEU n 2 41 ASP n 2 42 TYR n 2 43 LEU n 2 44 PHE n 2 45 ALA n 2 46 HIS n 2 47 GLY n 2 48 GLN n 2 49 LEU n 2 50 CYS n 2 51 GLU n 2 52 LYS n 2 53 GLY n 2 54 PHE n 2 55 ASP n 2 56 PRO n 2 57 LEU n 2 58 LEU n 2 59 VAL n 2 60 GLU n 2 61 GLU n 2 62 ALA n 2 63 LEU n 2 64 GLU n 2 65 MSO n 2 66 HIS n 2 67 GLN n 2 68 CYS n 2 69 SER n 2 70 GLU n 2 71 GLU n 2 72 LYS n 2 73 MSE n 2 74 MSE n 2 75 GLU n 2 76 PHE n 2 77 LEU n 2 78 GLN n 2 79 LEU n 2 80 MSE n 2 81 SER n 2 82 LYS n 2 83 PHE n 2 84 LYS n 2 85 GLU n 2 86 MSE n 2 87 GLY n 2 88 PHE n 2 89 GLU n 2 90 LEU n 2 91 LYS n 2 92 ASP n 2 93 ILE n 2 94 LYS n 2 95 GLU n 2 96 VAL n 2 97 LEU n 2 98 LEU n 2 99 LEU n 2 100 HIS n 2 101 ASN n 2 102 ASN n 2 103 ASP n 2 104 GLN n 2 105 ASP n 2 106 ASN n 2 107 ALA n 2 108 LEU n 2 109 GLU n 2 110 ASP n 2 111 LEU n 2 112 MSE n 2 113 ALA n 2 114 ARG n 2 115 ALA n 2 116 GLY n 2 117 ALA n 2 118 SER n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3)' 'C41 RIPL' ? ? ? ? ? ? PLASMID ? ? ? POPTH ? ? 2 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3)' 'C41 RIPL' ? ? ? ? ? ? PLASMID ? ? ? POPTH ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP UBAP1_HUMAN 1 ? ? Q9NZ09 ? 2 UNP UBAP1_HUMAN 2 ? ? Q9NZ09 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4AE4 A 5 ? 118 ? Q9NZ09 389 ? 502 ? 389 502 2 2 4AE4 B 5 ? 118 ? Q9NZ09 389 ? 502 ? 389 502 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4AE4 GLY A 1 ? UNP Q9NZ09 ? ? 'expression tag' 385 1 1 4AE4 SER A 2 ? UNP Q9NZ09 ? ? 'expression tag' 386 2 1 4AE4 HIS A 3 ? UNP Q9NZ09 ? ? 'expression tag' 387 3 1 4AE4 MSE A 4 ? UNP Q9NZ09 ? ? 'expression tag' 388 4 1 4AE4 ALA A 31 ? UNP Q9NZ09 LYS 415 'engineered mutation' 415 5 1 4AE4 ALA A 32 ? UNP Q9NZ09 LYS 416 'engineered mutation' 416 6 1 4AE4 ALA A 34 ? UNP Q9NZ09 GLU 418 'engineered mutation' 418 7 2 4AE4 GLY B 1 ? UNP Q9NZ09 ? ? 'expression tag' 385 8 2 4AE4 SER B 2 ? UNP Q9NZ09 ? ? 'expression tag' 386 9 2 4AE4 HIS B 3 ? UNP Q9NZ09 ? ? 'expression tag' 387 10 2 4AE4 MSE B 4 ? UNP Q9NZ09 ? ? 'expression tag' 388 11 2 4AE4 ALA B 31 ? UNP Q9NZ09 LYS 415 'engineered mutation' 415 12 2 4AE4 ALA B 32 ? UNP Q9NZ09 LYS 416 'engineered mutation' 416 13 2 4AE4 ALA B 34 ? UNP Q9NZ09 GLU 418 'engineered mutation' 418 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 MSO 'L-peptide linking' n 'SELENOMETHIONINE SELENOXIDE' ? 'C5 H11 N O3 Se' 212.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NHE non-polymer . '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' 'N-CYCLOHEXYLTAURINE; CHES' 'C8 H17 N O3 S' 207.290 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4AE4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.81 _exptl_crystal.density_percent_sol 56.3 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 9.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '645 MM NA/K TARTRATE, 271 MM LISO4, 100 MM CHES PH 9.5, 2 MM TCEP, 5% GLYCEROL' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARRESEARCH SX-165' _diffrn_detector.pdbx_collection_date 2011-06-24 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.980024 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM30A' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM30A _diffrn_source.pdbx_wavelength 0.980024 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4AE4 _reflns.observed_criterion_sigma_I 1.9 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 38.30 _reflns.d_resolution_high 1.65 _reflns.number_obs 36253 _reflns.number_all ? _reflns.percent_possible_obs 95.9 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.90 _reflns.B_iso_Wilson_estimate 24.61 _reflns.pdbx_redundancy 3.9 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.74 _reflns_shell.percent_possible_all 94.4 _reflns_shell.Rmerge_I_obs 0.54 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.90 _reflns_shell.pdbx_redundancy 3.9 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4AE4 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 36253 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.96 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.274 _refine.ls_d_res_high 1.650 _refine.ls_percent_reflns_obs 95.07 _refine.ls_R_factor_obs 0.1516 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1494 _refine.ls_R_factor_R_free 0.1907 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1481 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 0.15 _refine.aniso_B[1][1] 1.3538 _refine.aniso_B[2][2] -0.2862 _refine.aniso_B[3][3] -1.0676 _refine.aniso_B[1][2] -1.4206 _refine.aniso_B[1][3] -2.0590 _refine.aniso_B[2][3] -0.6781 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.402 _refine.solvent_model_param_bsol 49.983 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.83 _refine.pdbx_ls_cross_valid_method ? _refine.details 'THE FOLLOWING TABLE REFERS TO UNMERGED ANOMALOUS DATA: FIT TO DATA USED IN REFINEMENT' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.47 _refine.pdbx_overall_phase_error 19.90 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1822 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 37 _refine_hist.number_atoms_solvent 242 _refine_hist.number_atoms_total 2101 _refine_hist.d_res_high 1.650 _refine_hist.d_res_low 28.274 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.016 ? ? 1880 'X-RAY DIFFRACTION' ? f_angle_d 1.536 ? ? 2514 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 15.768 ? ? 733 'X-RAY DIFFRACTION' ? f_chiral_restr 0.096 ? ? 272 'X-RAY DIFFRACTION' ? f_plane_restr 0.006 ? ? 325 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.6500 1.6726 2611 0.3833 92.00 0.4849 . . 138 . . 'X-RAY DIFFRACTION' . 1.6726 1.6965 2535 0.3316 94.00 0.3806 . . 104 . . 'X-RAY DIFFRACTION' . 1.6965 1.7218 2596 0.3243 93.00 0.3856 . . 151 . . 'X-RAY DIFFRACTION' . 1.7218 1.7487 2624 0.3030 95.00 0.3785 . . 116 . . 'X-RAY DIFFRACTION' . 1.7487 1.7774 2543 0.2360 94.00 0.2984 . . 154 . . 'X-RAY DIFFRACTION' . 1.7774 1.8080 2732 0.2081 94.00 0.2547 . . 127 . . 'X-RAY DIFFRACTION' . 1.8080 1.8409 2516 0.1862 95.00 0.2490 . . 109 . . 'X-RAY DIFFRACTION' . 1.8409 1.8763 2669 0.1770 95.00 0.2462 . . 123 . . 'X-RAY DIFFRACTION' . 1.8763 1.9146 2648 0.1616 94.00 0.2254 . . 122 . . 'X-RAY DIFFRACTION' . 1.9146 1.9562 2555 0.1385 96.00 0.2424 . . 148 . . 'X-RAY DIFFRACTION' . 1.9562 2.0017 2588 0.1302 95.00 0.1831 . . 160 . . 'X-RAY DIFFRACTION' . 2.0017 2.0518 2729 0.1401 95.00 0.1618 . . 99 . . 'X-RAY DIFFRACTION' . 2.0518 2.1072 2607 0.1344 95.00 0.2026 . . 134 . . 'X-RAY DIFFRACTION' . 2.1072 2.1692 2684 0.1198 96.00 0.2063 . . 143 . . 'X-RAY DIFFRACTION' . 2.1692 2.2392 2572 0.1172 96.00 0.1453 . . 128 . . 'X-RAY DIFFRACTION' . 2.2392 2.3192 2628 0.1088 95.00 0.1524 . . 150 . . 'X-RAY DIFFRACTION' . 2.3192 2.4120 2681 0.1051 96.00 0.1622 . . 149 . . 'X-RAY DIFFRACTION' . 2.4120 2.5217 2629 0.1105 97.00 0.1444 . . 123 . . 'X-RAY DIFFRACTION' . 2.5217 2.6546 2638 0.1167 97.00 0.1812 . . 162 . . 'X-RAY DIFFRACTION' . 2.6546 2.8207 2667 0.1411 97.00 0.1688 . . 144 . . 'X-RAY DIFFRACTION' . 2.8207 3.0383 2584 0.1483 97.00 0.1929 . . 167 . . 'X-RAY DIFFRACTION' . 3.0383 3.3436 2699 0.1525 97.00 0.1889 . . 150 . . 'X-RAY DIFFRACTION' . 3.3436 3.8264 2656 0.1327 96.00 0.1613 . . 154 . . 'X-RAY DIFFRACTION' . 3.8264 4.8170 2604 0.1194 96.00 0.1461 . . 159 . . 'X-RAY DIFFRACTION' . 4.8170 28.2777 2490 0.2117 90.00 0.2590 . . 118 . . # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] 0.999900 _struct_ncs_oper.matrix[1][2] -0.003500 _struct_ncs_oper.matrix[1][3] 0.010200 _struct_ncs_oper.matrix[2][1] -0.003500 _struct_ncs_oper.matrix[2][2] -1.000000 _struct_ncs_oper.matrix[2][3] 0.000300 _struct_ncs_oper.matrix[3][1] 0.010200 _struct_ncs_oper.matrix[3][2] -0.000300 _struct_ncs_oper.matrix[3][3] -0.999900 _struct_ncs_oper.vector[1] -0.48670 _struct_ncs_oper.vector[2] -36.29150 _struct_ncs_oper.vector[3] 82.19130 # _struct.entry_id 4AE4 _struct.title 'The UBAP1 subunit of ESCRT-I interacts with ubiquitin via a novel SOUBA domain' _struct.pdbx_descriptor 'UBIQUITIN-ASSOCIATED PROTEIN 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4AE4 _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' _struct_keywords.text 'PROTEIN TRANSPORT, ENDOSOMAL SORTING, TETHERIN, VPU, HIV-1, MONOUBIQUITIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 4 ? G N N 3 ? H N N 4 ? I N N 4 ? J N N 6 ? K N N 7 ? L N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 5 ? MSE A 18 ? SER A 389 MSE A 402 1 ? 14 HELX_P HELX_P2 2 SER A 21 ? GLY A 33 ? SER A 405 GLY A 417 1 ? 13 HELX_P HELX_P3 3 ASN A 35 ? LYS A 52 ? ASN A 419 LYS A 436 1 ? 18 HELX_P HELX_P4 4 ASP A 55 ? HIS A 66 ? ASP A 439 HIS A 450 1 ? 12 HELX_P HELX_P5 5 SER A 69 ? MSE A 86 ? SER A 453 MSE A 470 1 ? 18 HELX_P HELX_P6 6 GLU A 89 ? HIS A 100 ? GLU A 473 HIS A 484 1 ? 12 HELX_P HELX_P7 7 ASP A 103 ? ALA A 115 ? ASP A 487 ALA A 499 1 ? 13 HELX_P HELX_P8 8 SER B 5 ? MSO B 18 ? SER B 389 MSO B 402 1 ? 14 HELX_P HELX_P9 9 SER B 21 ? GLY B 33 ? SER B 405 GLY B 417 1 ? 13 HELX_P HELX_P10 10 ASN B 35 ? LYS B 52 ? ASN B 419 LYS B 436 1 ? 18 HELX_P HELX_P11 11 ASP B 55 ? HIS B 66 ? ASP B 439 HIS B 450 1 ? 12 HELX_P HELX_P12 12 SER B 69 ? GLY B 87 ? SER B 453 GLY B 471 1 ? 19 HELX_P HELX_P13 13 GLU B 89 ? HIS B 100 ? GLU B 473 HIS B 484 1 ? 12 HELX_P HELX_P14 14 ASP B 103 ? ALA B 113 ? ASP B 487 ALA B 497 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 68 SG ? ? ? 1_555 B CYS 68 SG ? ? A CYS 452 B CYS 452 1_555 ? ? ? ? ? ? ? 2.038 ? covale1 covale ? ? A MSE 4 N ? ? ? 1_555 A HIS 3 C ? ? A MSE 388 A HIS 387 1_555 ? ? ? ? ? ? ? 1.312 ? covale2 covale ? ? A MSE 4 C ? ? ? 1_555 A SER 5 N ? ? A MSE 388 A SER 389 1_555 ? ? ? ? ? ? ? 1.328 ? covale3 covale ? ? A MSE 18 N ? ? ? 1_555 A ASN 17 C ? ? A MSE 402 A ASN 401 1_555 ? ? ? ? ? ? ? 1.320 ? covale4 covale ? ? A MSE 18 C ? ? ? 1_555 A GLY 19 N ? ? A MSE 402 A GLY 403 1_555 ? ? ? ? ? ? ? 1.334 ? covale5 covale ? ? A MSE 29 N ? ? ? 1_555 A ALA 28 C ? ? A MSE 413 A ALA 412 1_555 ? ? ? ? ? ? ? 1.328 ? covale6 covale ? ? A MSE 29 C ? ? ? 1_555 A LYS 30 N ? ? A MSE 413 A LYS 414 1_555 ? ? ? ? ? ? ? 1.322 ? covale7 covale ? ? A MSE 65 N ? ? ? 1_555 A GLU 64 C ? ? A MSE 449 A GLU 448 1_555 ? ? ? ? ? ? ? 1.338 ? covale8 covale ? ? A MSE 65 C ? ? ? 1_555 A HIS 66 N ? ? A MSE 449 A HIS 450 1_555 ? ? ? ? ? ? ? 1.325 ? covale9 covale ? ? A MSE 73 N ? ? ? 1_555 A LYS 72 C ? ? A MSE 457 A LYS 456 1_555 ? ? ? ? ? ? ? 1.335 ? covale10 covale ? ? A MSE 73 C ? ? ? 1_555 A MSE 74 N ? ? A MSE 457 A MSE 458 1_555 ? ? ? ? ? ? ? 1.330 ? covale11 covale ? ? A MSE 74 C ? ? ? 1_555 A GLU 75 N ? ? A MSE 458 A GLU 459 1_555 ? ? ? ? ? ? ? 1.329 ? covale12 covale ? ? A MSE 80 N ? ? ? 1_555 A LEU 79 C ? ? A MSE 464 A LEU 463 1_555 ? ? ? ? ? ? ? 1.337 ? covale13 covale ? ? A MSE 80 C ? ? ? 1_555 A SER 81 N ? ? A MSE 464 A SER 465 1_555 ? ? ? ? ? ? ? 1.327 ? covale14 covale ? ? A MSE 86 N ? ? ? 1_555 A GLU 85 C ? ? A MSE 470 A GLU 469 1_555 ? ? ? ? ? ? ? 1.331 ? covale15 covale ? ? A MSE 86 C ? ? ? 1_555 A GLY 87 N ? ? A MSE 470 A GLY 471 1_555 ? ? ? ? ? ? ? 1.332 ? covale16 covale ? ? A MSE 112 N ? ? ? 1_555 A LEU 111 C ? ? A MSE 496 A LEU 495 1_555 ? ? ? ? ? ? ? 1.333 ? covale17 covale ? ? A MSE 112 C ? ? ? 1_555 A ALA 113 N ? ? A MSE 496 A ALA 497 1_555 ? ? ? ? ? ? ? 1.330 ? metalc1 metalc ? ? D K . K ? ? ? 1_555 K HOH . O ? ? A K 1501 A HOH 2097 1_555 ? ? ? ? ? ? ? 3.353 ? metalc2 metalc ? ? F K . K ? ? ? 1_555 A MSE 65 SE ? ? A K 1503 A MSE 449 1_555 ? ? ? ? ? ? ? 3.175 ? metalc3 metalc ? ? F K . K ? ? ? 1_555 K HOH . O ? ? A K 1503 A HOH 2091 1_555 ? ? ? ? ? ? ? 3.129 ? covale18 covale ? ? B MSE 4 C ? ? ? 1_555 B SER 5 N ? ? B MSE 388 B SER 389 1_555 ? ? ? ? ? ? ? 1.327 ? covale19 covale ? ? B MSE 4 N ? ? ? 1_555 B HIS 3 C ? ? B MSE 388 B HIS 387 1_555 ? ? ? ? ? ? ? 1.314 ? covale20 covale ? ? B MSO 18 C ? ? ? 1_555 B GLY 19 N ? ? B MSO 402 B GLY 403 1_555 ? ? ? ? ? ? ? 1.337 ? covale21 covale ? ? B MSO 18 N ? ? ? 1_555 B ASN 17 C ? ? B MSO 402 B ASN 401 1_555 ? ? ? ? ? ? ? 1.332 ? covale22 covale ? ? B MSE 29 C ? ? ? 1_555 B LYS 30 N ? ? B MSE 413 B LYS 414 1_555 ? ? ? ? ? ? ? 1.327 ? covale23 covale ? ? B MSE 29 N ? ? ? 1_555 B ALA 28 C ? ? B MSE 413 B ALA 412 1_555 ? ? ? ? ? ? ? 1.327 ? metalc4 metalc ? ? B MSO 65 OE ? ? ? 1_555 J NA . NA ? ? B MSO 449 B NA 1504 1_555 ? ? ? ? ? ? ? 2.435 ? covale24 covale ? ? B MSO 65 N ? ? ? 1_555 B GLU 64 C ? ? B MSO 449 B GLU 448 1_555 ? ? ? ? ? ? ? 1.332 ? covale25 covale ? ? B MSO 65 C ? ? ? 1_555 B HIS 66 N ? ? B MSO 449 B HIS 450 1_555 ? ? ? ? ? ? ? 1.328 ? covale26 covale ? ? B MSE 73 C ? ? ? 1_555 B MSE 74 N ? ? B MSE 457 B MSE 458 1_555 ? ? ? ? ? ? ? 1.339 ? covale27 covale ? ? B MSE 73 N ? ? ? 1_555 B LYS 72 C ? ? B MSE 457 B LYS 456 1_555 ? ? ? ? ? ? ? 1.328 ? covale28 covale ? ? B MSE 74 C ? ? ? 1_555 B GLU 75 N ? ? B MSE 458 B GLU 459 1_555 ? ? ? ? ? ? ? 1.330 ? covale29 covale ? ? B MSE 80 C ? ? ? 1_555 B SER 81 N ? ? B MSE 464 B SER 465 1_555 ? ? ? ? ? ? ? 1.338 ? covale30 covale ? ? B MSE 80 N ? ? ? 1_555 B LEU 79 C ? ? B MSE 464 B LEU 463 1_555 ? ? ? ? ? ? ? 1.329 ? covale31 covale ? ? B MSE 86 C ? ? ? 1_555 B GLY 87 N ? ? B MSE 470 B GLY 471 1_555 ? ? ? ? ? ? ? 1.330 ? covale32 covale ? ? B MSE 86 N ? ? ? 1_555 B GLU 85 C ? ? B MSE 470 B GLU 469 1_555 ? ? ? ? ? ? ? 1.337 ? covale33 covale ? ? B MSE 112 C ? ? ? 1_555 B ALA 113 N ? ? B MSE 496 B ALA 497 1_555 ? ? ? ? ? ? ? 1.327 ? covale34 covale ? ? B MSE 112 N ? ? ? 1_555 B LEU 111 C ? ? B MSE 496 B LEU 495 1_555 ? ? ? ? ? ? ? 1.324 ? metalc5 metalc ? ? J NA . NA ? ? ? 1_555 L HOH . O ? ? B NA 1504 B HOH 2073 1_555 ? ? ? ? ? ? ? 2.682 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE NHE A 1500' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE K A 1501' AC3 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE GOL A 1502' AC4 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE K A 1503' AC5 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE NHE B 1501' AC6 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE K B 1502' AC7 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE NA B 1504' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 24 ? CYS A 408 . ? 1_555 ? 2 AC1 4 ARG A 27 ? ARG A 411 . ? 1_555 ? 3 AC1 4 LEU A 43 ? LEU A 427 . ? 1_555 ? 4 AC1 4 HOH K . ? HOH A 2075 . ? 1_555 ? 5 AC2 3 HIS A 66 ? HIS A 450 . ? 1_555 ? 6 AC2 3 CYS A 68 ? CYS A 452 . ? 1_555 ? 7 AC2 3 LYS A 72 ? LYS A 456 . ? 1_555 ? 8 AC3 2 LYS A 52 ? LYS A 436 . ? 1_555 ? 9 AC3 2 GLY A 53 ? GLY A 437 . ? 1_555 ? 10 AC4 1 MSE A 65 ? MSE A 449 . ? 1_555 ? 11 AC5 4 CYS B 24 ? CYS B 408 . ? 1_555 ? 12 AC5 4 ARG B 27 ? ARG B 411 . ? 1_555 ? 13 AC5 4 LEU B 43 ? LEU B 427 . ? 1_555 ? 14 AC5 4 HOH L . ? HOH B 2064 . ? 1_555 ? 15 AC6 2 HIS B 66 ? HIS B 450 . ? 1_555 ? 16 AC6 2 CYS B 68 ? CYS B 452 . ? 1_555 ? 17 AC7 2 MSO B 65 ? MSO B 449 . ? 1_555 ? 18 AC7 2 HOH L . ? HOH B 2073 . ? 1_555 ? # _database_PDB_matrix.entry_id 4AE4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4AE4 _atom_sites.fract_transf_matrix[1][1] 0.029066 _atom_sites.fract_transf_matrix[1][2] 0.012482 _atom_sites.fract_transf_matrix[1][3] 0.007185 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025030 _atom_sites.fract_transf_matrix[2][3] 0.007506 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017685 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K N NA O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 385 ? ? ? A . n A 1 2 SER 2 386 386 SER SER A . n A 1 3 HIS 3 387 387 HIS HIS A . n A 1 4 MSE 4 388 388 MSE MSE A . n A 1 5 SER 5 389 389 SER SER A . n A 1 6 PRO 6 390 390 PRO PRO A . n A 1 7 SER 7 391 391 SER SER A . n A 1 8 GLU 8 392 392 GLU GLU A . n A 1 9 ARG 9 393 393 ARG ARG A . n A 1 10 GLN 10 394 394 GLN GLN A . n A 1 11 CYS 11 395 395 CYS CYS A . n A 1 12 VAL 12 396 396 VAL VAL A . n A 1 13 GLU 13 397 397 GLU GLU A . n A 1 14 THR 14 398 398 THR THR A . n A 1 15 VAL 15 399 399 VAL VAL A . n A 1 16 VAL 16 400 400 VAL VAL A . n A 1 17 ASN 17 401 401 ASN ASN A . n A 1 18 MSE 18 402 402 MSE MSE A . n A 1 19 GLY 19 403 403 GLY GLY A . n A 1 20 TYR 20 404 404 TYR TYR A . n A 1 21 SER 21 405 405 SER SER A . n A 1 22 TYR 22 406 406 TYR TYR A . n A 1 23 GLU 23 407 407 GLU GLU A . n A 1 24 CYS 24 408 408 CYS CYS A . n A 1 25 VAL 25 409 409 VAL VAL A . n A 1 26 LEU 26 410 410 LEU LEU A . n A 1 27 ARG 27 411 411 ARG ARG A . n A 1 28 ALA 28 412 412 ALA ALA A . n A 1 29 MSE 29 413 413 MSE MSE A . n A 1 30 LYS 30 414 414 LYS LYS A . n A 1 31 ALA 31 415 415 ALA ALA A . n A 1 32 ALA 32 416 416 ALA ALA A . n A 1 33 GLY 33 417 417 GLY GLY A . n A 1 34 ALA 34 418 418 ALA ALA A . n A 1 35 ASN 35 419 419 ASN ASN A . n A 1 36 ILE 36 420 420 ILE ILE A . n A 1 37 GLU 37 421 421 GLU GLU A . n A 1 38 GLN 38 422 422 GLN GLN A . n A 1 39 ILE 39 423 423 ILE ILE A . n A 1 40 LEU 40 424 424 LEU LEU A . n A 1 41 ASP 41 425 425 ASP ASP A . n A 1 42 TYR 42 426 426 TYR TYR A . n A 1 43 LEU 43 427 427 LEU LEU A . n A 1 44 PHE 44 428 428 PHE PHE A . n A 1 45 ALA 45 429 429 ALA ALA A . n A 1 46 HIS 46 430 430 HIS HIS A . n A 1 47 GLY 47 431 431 GLY GLY A . n A 1 48 GLN 48 432 432 GLN GLN A . n A 1 49 LEU 49 433 433 LEU LEU A . n A 1 50 CYS 50 434 434 CYS CYS A . n A 1 51 GLU 51 435 435 GLU GLU A . n A 1 52 LYS 52 436 436 LYS LYS A . n A 1 53 GLY 53 437 437 GLY GLY A . n A 1 54 PHE 54 438 438 PHE PHE A . n A 1 55 ASP 55 439 439 ASP ASP A . n A 1 56 PRO 56 440 440 PRO PRO A . n A 1 57 LEU 57 441 441 LEU LEU A . n A 1 58 LEU 58 442 442 LEU LEU A . n A 1 59 VAL 59 443 443 VAL VAL A . n A 1 60 GLU 60 444 444 GLU GLU A . n A 1 61 GLU 61 445 445 GLU GLU A . n A 1 62 ALA 62 446 446 ALA ALA A . n A 1 63 LEU 63 447 447 LEU LEU A . n A 1 64 GLU 64 448 448 GLU GLU A . n A 1 65 MSE 65 449 449 MSE MSE A . n A 1 66 HIS 66 450 450 HIS HIS A . n A 1 67 GLN 67 451 451 GLN GLN A . n A 1 68 CYS 68 452 452 CYS CYS A . n A 1 69 SER 69 453 453 SER SER A . n A 1 70 GLU 70 454 454 GLU GLU A . n A 1 71 GLU 71 455 455 GLU GLU A . n A 1 72 LYS 72 456 456 LYS LYS A . n A 1 73 MSE 73 457 457 MSE MSE A . n A 1 74 MSE 74 458 458 MSE MSE A . n A 1 75 GLU 75 459 459 GLU GLU A . n A 1 76 PHE 76 460 460 PHE PHE A . n A 1 77 LEU 77 461 461 LEU LEU A . n A 1 78 GLN 78 462 462 GLN GLN A . n A 1 79 LEU 79 463 463 LEU LEU A . n A 1 80 MSE 80 464 464 MSE MSE A . n A 1 81 SER 81 465 465 SER SER A . n A 1 82 LYS 82 466 466 LYS LYS A . n A 1 83 PHE 83 467 467 PHE PHE A . n A 1 84 LYS 84 468 468 LYS LYS A . n A 1 85 GLU 85 469 469 GLU GLU A . n A 1 86 MSE 86 470 470 MSE MSE A . n A 1 87 GLY 87 471 471 GLY GLY A . n A 1 88 PHE 88 472 472 PHE PHE A . n A 1 89 GLU 89 473 473 GLU GLU A . n A 1 90 LEU 90 474 474 LEU LEU A . n A 1 91 LYS 91 475 475 LYS LYS A . n A 1 92 ASP 92 476 476 ASP ASP A . n A 1 93 ILE 93 477 477 ILE ILE A . n A 1 94 LYS 94 478 478 LYS LYS A . n A 1 95 GLU 95 479 479 GLU GLU A . n A 1 96 VAL 96 480 480 VAL VAL A . n A 1 97 LEU 97 481 481 LEU LEU A . n A 1 98 LEU 98 482 482 LEU LEU A . n A 1 99 LEU 99 483 483 LEU LEU A . n A 1 100 HIS 100 484 484 HIS HIS A . n A 1 101 ASN 101 485 485 ASN ASN A . n A 1 102 ASN 102 486 486 ASN ASN A . n A 1 103 ASP 103 487 487 ASP ASP A . n A 1 104 GLN 104 488 488 GLN GLN A . n A 1 105 ASP 105 489 489 ASP ASP A . n A 1 106 ASN 106 490 490 ASN ASN A . n A 1 107 ALA 107 491 491 ALA ALA A . n A 1 108 LEU 108 492 492 LEU LEU A . n A 1 109 GLU 109 493 493 GLU GLU A . n A 1 110 ASP 110 494 494 ASP ASP A . n A 1 111 LEU 111 495 495 LEU LEU A . n A 1 112 MSE 112 496 496 MSE MSE A . n A 1 113 ALA 113 497 497 ALA ALA A . n A 1 114 ARG 114 498 498 ARG ARG A . n A 1 115 ALA 115 499 499 ALA ALA A . n A 1 116 GLY 116 500 ? ? ? A . n A 1 117 ALA 117 501 ? ? ? A . n A 1 118 SER 118 502 ? ? ? A . n B 2 1 GLY 1 385 ? ? ? B . n B 2 2 SER 2 386 386 SER SER B . n B 2 3 HIS 3 387 387 HIS HIS B . n B 2 4 MSE 4 388 388 MSE MSE B . n B 2 5 SER 5 389 389 SER SER B . n B 2 6 PRO 6 390 390 PRO PRO B . n B 2 7 SER 7 391 391 SER SER B . n B 2 8 GLU 8 392 392 GLU GLU B . n B 2 9 ARG 9 393 393 ARG ARG B . n B 2 10 GLN 10 394 394 GLN GLN B . n B 2 11 CYS 11 395 395 CYS CYS B . n B 2 12 VAL 12 396 396 VAL VAL B . n B 2 13 GLU 13 397 397 GLU GLU B . n B 2 14 THR 14 398 398 THR THR B . n B 2 15 VAL 15 399 399 VAL VAL B . n B 2 16 VAL 16 400 400 VAL VAL B . n B 2 17 ASN 17 401 401 ASN ASN B . n B 2 18 MSO 18 402 402 MSO MSO B . n B 2 19 GLY 19 403 403 GLY GLY B . n B 2 20 TYR 20 404 404 TYR TYR B . n B 2 21 SER 21 405 405 SER SER B . n B 2 22 TYR 22 406 406 TYR TYR B . n B 2 23 GLU 23 407 407 GLU GLU B . n B 2 24 CYS 24 408 408 CYS CYS B . n B 2 25 VAL 25 409 409 VAL VAL B . n B 2 26 LEU 26 410 410 LEU LEU B . n B 2 27 ARG 27 411 411 ARG ARG B . n B 2 28 ALA 28 412 412 ALA ALA B . n B 2 29 MSE 29 413 413 MSE MSE B . n B 2 30 LYS 30 414 414 LYS LYS B . n B 2 31 ALA 31 415 415 ALA ALA B . n B 2 32 ALA 32 416 416 ALA ALA B . n B 2 33 GLY 33 417 417 GLY GLY B . n B 2 34 ALA 34 418 418 ALA ALA B . n B 2 35 ASN 35 419 419 ASN ASN B . n B 2 36 ILE 36 420 420 ILE ILE B . n B 2 37 GLU 37 421 421 GLU GLU B . n B 2 38 GLN 38 422 422 GLN GLN B . n B 2 39 ILE 39 423 423 ILE ILE B . n B 2 40 LEU 40 424 424 LEU LEU B . n B 2 41 ASP 41 425 425 ASP ASP B . n B 2 42 TYR 42 426 426 TYR TYR B . n B 2 43 LEU 43 427 427 LEU LEU B . n B 2 44 PHE 44 428 428 PHE PHE B . n B 2 45 ALA 45 429 429 ALA ALA B . n B 2 46 HIS 46 430 430 HIS HIS B . n B 2 47 GLY 47 431 431 GLY GLY B . n B 2 48 GLN 48 432 432 GLN GLN B . n B 2 49 LEU 49 433 433 LEU LEU B . n B 2 50 CYS 50 434 434 CYS CYS B . n B 2 51 GLU 51 435 435 GLU GLU B . n B 2 52 LYS 52 436 436 LYS LYS B . n B 2 53 GLY 53 437 437 GLY GLY B . n B 2 54 PHE 54 438 438 PHE PHE B . n B 2 55 ASP 55 439 439 ASP ASP B . n B 2 56 PRO 56 440 440 PRO PRO B . n B 2 57 LEU 57 441 441 LEU LEU B . n B 2 58 LEU 58 442 442 LEU LEU B . n B 2 59 VAL 59 443 443 VAL VAL B . n B 2 60 GLU 60 444 444 GLU GLU B . n B 2 61 GLU 61 445 445 GLU GLU B . n B 2 62 ALA 62 446 446 ALA ALA B . n B 2 63 LEU 63 447 447 LEU LEU B . n B 2 64 GLU 64 448 448 GLU GLU B . n B 2 65 MSO 65 449 449 MSO MSO B . n B 2 66 HIS 66 450 450 HIS HIS B . n B 2 67 GLN 67 451 451 GLN GLN B . n B 2 68 CYS 68 452 452 CYS CYS B . n B 2 69 SER 69 453 453 SER SER B . n B 2 70 GLU 70 454 454 GLU GLU B . n B 2 71 GLU 71 455 455 GLU GLU B . n B 2 72 LYS 72 456 456 LYS LYS B . n B 2 73 MSE 73 457 457 MSE MSE B . n B 2 74 MSE 74 458 458 MSE MSE B . n B 2 75 GLU 75 459 459 GLU GLU B . n B 2 76 PHE 76 460 460 PHE PHE B . n B 2 77 LEU 77 461 461 LEU LEU B . n B 2 78 GLN 78 462 462 GLN GLN B . n B 2 79 LEU 79 463 463 LEU LEU B . n B 2 80 MSE 80 464 464 MSE MSE B . n B 2 81 SER 81 465 465 SER SER B . n B 2 82 LYS 82 466 466 LYS LYS B . n B 2 83 PHE 83 467 467 PHE PHE B . n B 2 84 LYS 84 468 468 LYS LYS B . n B 2 85 GLU 85 469 469 GLU GLU B . n B 2 86 MSE 86 470 470 MSE MSE B . n B 2 87 GLY 87 471 471 GLY GLY B . n B 2 88 PHE 88 472 472 PHE PHE B . n B 2 89 GLU 89 473 473 GLU GLU B . n B 2 90 LEU 90 474 474 LEU LEU B . n B 2 91 LYS 91 475 475 LYS LYS B . n B 2 92 ASP 92 476 476 ASP ASP B . n B 2 93 ILE 93 477 477 ILE ILE B . n B 2 94 LYS 94 478 478 LYS LYS B . n B 2 95 GLU 95 479 479 GLU GLU B . n B 2 96 VAL 96 480 480 VAL VAL B . n B 2 97 LEU 97 481 481 LEU LEU B . n B 2 98 LEU 98 482 482 LEU LEU B . n B 2 99 LEU 99 483 483 LEU LEU B . n B 2 100 HIS 100 484 484 HIS HIS B . n B 2 101 ASN 101 485 485 ASN ASN B . n B 2 102 ASN 102 486 486 ASN ASN B . n B 2 103 ASP 103 487 487 ASP ASP B . n B 2 104 GLN 104 488 488 GLN GLN B . n B 2 105 ASP 105 489 489 ASP ASP B . n B 2 106 ASN 106 490 490 ASN ASN B . n B 2 107 ALA 107 491 491 ALA ALA B . n B 2 108 LEU 108 492 492 LEU LEU B . n B 2 109 GLU 109 493 493 GLU GLU B . n B 2 110 ASP 110 494 494 ASP ASP B . n B 2 111 LEU 111 495 495 LEU LEU B . n B 2 112 MSE 112 496 496 MSE MSE B . n B 2 113 ALA 113 497 497 ALA ALA B . n B 2 114 ARG 114 498 498 ARG ARG B . n B 2 115 ALA 115 499 499 ALA ALA B . n B 2 116 GLY 116 500 500 GLY GLY B . n B 2 117 ALA 117 501 ? ? ? B . n B 2 118 SER 118 502 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NHE 1 1500 1500 NHE NHE A . D 4 K 1 1501 1501 K K A . E 5 GOL 1 1502 1502 GOL GOL A . F 4 K 1 1503 1503 K K A . G 3 NHE 1 1501 1501 NHE NHE B . H 4 K 1 1502 1502 K K B . I 4 K 1 1503 1503 K K B . J 6 NA 1 1504 1504 NA NA B . K 7 HOH 1 2001 2001 HOH HOH A . K 7 HOH 2 2002 2002 HOH HOH A . K 7 HOH 3 2003 2003 HOH HOH A . K 7 HOH 4 2004 2004 HOH HOH A . K 7 HOH 5 2005 2005 HOH HOH A . K 7 HOH 6 2006 2006 HOH HOH A . K 7 HOH 7 2007 2007 HOH HOH A . K 7 HOH 8 2008 2008 HOH HOH A . K 7 HOH 9 2009 2009 HOH HOH A . K 7 HOH 10 2010 2010 HOH HOH A . K 7 HOH 11 2011 2011 HOH HOH A . K 7 HOH 12 2012 2012 HOH HOH A . K 7 HOH 13 2013 2013 HOH HOH A . K 7 HOH 14 2014 2014 HOH HOH A . K 7 HOH 15 2015 2015 HOH HOH A . K 7 HOH 16 2016 2016 HOH HOH A . K 7 HOH 17 2017 2017 HOH HOH A . K 7 HOH 18 2018 2018 HOH HOH A . K 7 HOH 19 2019 2019 HOH HOH A . K 7 HOH 20 2020 2020 HOH HOH A . K 7 HOH 21 2021 2021 HOH HOH A . K 7 HOH 22 2022 2022 HOH HOH A . K 7 HOH 23 2023 2023 HOH HOH A . K 7 HOH 24 2024 2024 HOH HOH A . K 7 HOH 25 2025 2025 HOH HOH A . K 7 HOH 26 2026 2026 HOH HOH A . K 7 HOH 27 2027 2027 HOH HOH A . K 7 HOH 28 2028 2028 HOH HOH A . K 7 HOH 29 2029 2029 HOH HOH A . K 7 HOH 30 2030 2030 HOH HOH A . K 7 HOH 31 2031 2031 HOH HOH A . K 7 HOH 32 2032 2032 HOH HOH A . K 7 HOH 33 2033 2033 HOH HOH A . K 7 HOH 34 2034 2034 HOH HOH A . K 7 HOH 35 2035 2035 HOH HOH A . K 7 HOH 36 2036 2036 HOH HOH A . K 7 HOH 37 2037 2037 HOH HOH A . K 7 HOH 38 2038 2038 HOH HOH A . K 7 HOH 39 2039 2039 HOH HOH A . K 7 HOH 40 2040 2040 HOH HOH A . K 7 HOH 41 2041 2041 HOH HOH A . K 7 HOH 42 2042 2042 HOH HOH A . K 7 HOH 43 2043 2043 HOH HOH A . K 7 HOH 44 2044 2044 HOH HOH A . K 7 HOH 45 2045 2045 HOH HOH A . K 7 HOH 46 2046 2046 HOH HOH A . K 7 HOH 47 2047 2047 HOH HOH A . K 7 HOH 48 2048 2048 HOH HOH A . K 7 HOH 49 2049 2049 HOH HOH A . K 7 HOH 50 2050 2050 HOH HOH A . K 7 HOH 51 2051 2051 HOH HOH A . K 7 HOH 52 2052 2052 HOH HOH A . K 7 HOH 53 2053 2053 HOH HOH A . K 7 HOH 54 2054 2054 HOH HOH A . K 7 HOH 55 2055 2055 HOH HOH A . K 7 HOH 56 2056 2056 HOH HOH A . K 7 HOH 57 2057 2057 HOH HOH A . K 7 HOH 58 2058 2058 HOH HOH A . K 7 HOH 59 2059 2059 HOH HOH A . K 7 HOH 60 2060 2060 HOH HOH A . K 7 HOH 61 2061 2061 HOH HOH A . K 7 HOH 62 2062 2062 HOH HOH A . K 7 HOH 63 2063 2063 HOH HOH A . K 7 HOH 64 2064 2064 HOH HOH A . K 7 HOH 65 2065 2065 HOH HOH A . K 7 HOH 66 2066 2066 HOH HOH A . K 7 HOH 67 2067 2067 HOH HOH A . K 7 HOH 68 2068 2068 HOH HOH A . K 7 HOH 69 2069 2069 HOH HOH A . K 7 HOH 70 2070 2070 HOH HOH A . K 7 HOH 71 2071 2071 HOH HOH A . K 7 HOH 72 2072 2072 HOH HOH A . K 7 HOH 73 2073 2073 HOH HOH A . K 7 HOH 74 2074 2074 HOH HOH A . K 7 HOH 75 2075 2075 HOH HOH A . K 7 HOH 76 2076 2076 HOH HOH A . K 7 HOH 77 2077 2077 HOH HOH A . K 7 HOH 78 2078 2078 HOH HOH A . K 7 HOH 79 2079 2079 HOH HOH A . K 7 HOH 80 2080 2080 HOH HOH A . K 7 HOH 81 2081 2081 HOH HOH A . K 7 HOH 82 2082 2082 HOH HOH A . K 7 HOH 83 2083 2083 HOH HOH A . K 7 HOH 84 2084 2084 HOH HOH A . K 7 HOH 85 2085 2085 HOH HOH A . K 7 HOH 86 2086 2086 HOH HOH A . K 7 HOH 87 2087 2087 HOH HOH A . K 7 HOH 88 2088 2088 HOH HOH A . K 7 HOH 89 2089 2089 HOH HOH A . K 7 HOH 90 2090 2090 HOH HOH A . K 7 HOH 91 2091 2091 HOH HOH A . K 7 HOH 92 2092 2092 HOH HOH A . K 7 HOH 93 2093 2093 HOH HOH A . K 7 HOH 94 2094 2094 HOH HOH A . K 7 HOH 95 2095 2095 HOH HOH A . K 7 HOH 96 2096 2096 HOH HOH A . K 7 HOH 97 2097 2097 HOH HOH A . K 7 HOH 98 2098 2098 HOH HOH A . K 7 HOH 99 2099 2099 HOH HOH A . K 7 HOH 100 2100 2100 HOH HOH A . K 7 HOH 101 2101 2101 HOH HOH A . K 7 HOH 102 2102 2102 HOH HOH A . K 7 HOH 103 2103 2103 HOH HOH A . K 7 HOH 104 2104 2104 HOH HOH A . K 7 HOH 105 2105 2105 HOH HOH A . K 7 HOH 106 2106 2106 HOH HOH A . K 7 HOH 107 2107 2107 HOH HOH A . K 7 HOH 108 2108 2108 HOH HOH A . K 7 HOH 109 2109 2109 HOH HOH A . K 7 HOH 110 2110 2110 HOH HOH A . K 7 HOH 111 2111 2111 HOH HOH A . K 7 HOH 112 2112 2112 HOH HOH A . K 7 HOH 113 2113 2113 HOH HOH A . K 7 HOH 114 2114 2114 HOH HOH A . K 7 HOH 115 2115 2115 HOH HOH A . K 7 HOH 116 2116 2116 HOH HOH A . K 7 HOH 117 2117 2117 HOH HOH A . K 7 HOH 118 2118 2118 HOH HOH A . K 7 HOH 119 2119 2119 HOH HOH A . K 7 HOH 120 2120 2120 HOH HOH A . K 7 HOH 121 2121 2121 HOH HOH A . K 7 HOH 122 2122 2122 HOH HOH A . K 7 HOH 123 2123 2123 HOH HOH A . K 7 HOH 124 2124 2124 HOH HOH A . K 7 HOH 125 2125 2125 HOH HOH A . K 7 HOH 126 2126 2126 HOH HOH A . K 7 HOH 127 2127 2127 HOH HOH A . K 7 HOH 128 2128 2128 HOH HOH A . L 7 HOH 1 2001 2001 HOH HOH B . L 7 HOH 2 2002 2002 HOH HOH B . L 7 HOH 3 2003 2003 HOH HOH B . L 7 HOH 4 2004 2004 HOH HOH B . L 7 HOH 5 2005 2005 HOH HOH B . L 7 HOH 6 2006 2006 HOH HOH B . L 7 HOH 7 2007 2007 HOH HOH B . L 7 HOH 8 2008 2008 HOH HOH B . L 7 HOH 9 2009 2009 HOH HOH B . L 7 HOH 10 2010 2010 HOH HOH B . L 7 HOH 11 2011 2011 HOH HOH B . L 7 HOH 12 2012 2012 HOH HOH B . L 7 HOH 13 2013 2013 HOH HOH B . L 7 HOH 14 2014 2014 HOH HOH B . L 7 HOH 15 2015 2015 HOH HOH B . L 7 HOH 16 2016 2016 HOH HOH B . L 7 HOH 17 2017 2017 HOH HOH B . L 7 HOH 18 2018 2018 HOH HOH B . L 7 HOH 19 2019 2019 HOH HOH B . L 7 HOH 20 2020 2020 HOH HOH B . L 7 HOH 21 2021 2021 HOH HOH B . L 7 HOH 22 2022 2022 HOH HOH B . L 7 HOH 23 2023 2023 HOH HOH B . L 7 HOH 24 2024 2024 HOH HOH B . L 7 HOH 25 2025 2025 HOH HOH B . L 7 HOH 26 2026 2026 HOH HOH B . L 7 HOH 27 2027 2027 HOH HOH B . L 7 HOH 28 2028 2028 HOH HOH B . L 7 HOH 29 2029 2029 HOH HOH B . L 7 HOH 30 2030 2030 HOH HOH B . L 7 HOH 31 2031 2031 HOH HOH B . L 7 HOH 32 2032 2032 HOH HOH B . L 7 HOH 33 2033 2033 HOH HOH B . L 7 HOH 34 2034 2034 HOH HOH B . L 7 HOH 35 2035 2035 HOH HOH B . L 7 HOH 36 2036 2036 HOH HOH B . L 7 HOH 37 2037 2037 HOH HOH B . L 7 HOH 38 2038 2038 HOH HOH B . L 7 HOH 39 2039 2039 HOH HOH B . L 7 HOH 40 2040 2040 HOH HOH B . L 7 HOH 41 2041 2041 HOH HOH B . L 7 HOH 42 2042 2042 HOH HOH B . L 7 HOH 43 2043 2043 HOH HOH B . L 7 HOH 44 2044 2044 HOH HOH B . L 7 HOH 45 2045 2045 HOH HOH B . L 7 HOH 46 2046 2046 HOH HOH B . L 7 HOH 47 2047 2047 HOH HOH B . L 7 HOH 48 2048 2048 HOH HOH B . L 7 HOH 49 2049 2049 HOH HOH B . L 7 HOH 50 2050 2050 HOH HOH B . L 7 HOH 51 2051 2051 HOH HOH B . L 7 HOH 52 2052 2052 HOH HOH B . L 7 HOH 53 2053 2053 HOH HOH B . L 7 HOH 54 2054 2054 HOH HOH B . L 7 HOH 55 2055 2055 HOH HOH B . L 7 HOH 56 2056 2056 HOH HOH B . L 7 HOH 57 2057 2057 HOH HOH B . L 7 HOH 58 2058 2058 HOH HOH B . L 7 HOH 59 2059 2059 HOH HOH B . L 7 HOH 60 2060 2060 HOH HOH B . L 7 HOH 61 2061 2061 HOH HOH B . L 7 HOH 62 2062 2062 HOH HOH B . L 7 HOH 63 2063 2063 HOH HOH B . L 7 HOH 64 2064 2064 HOH HOH B . L 7 HOH 65 2065 2065 HOH HOH B . L 7 HOH 66 2066 2066 HOH HOH B . L 7 HOH 67 2067 2067 HOH HOH B . L 7 HOH 68 2068 2068 HOH HOH B . L 7 HOH 69 2069 2069 HOH HOH B . L 7 HOH 70 2070 2070 HOH HOH B . L 7 HOH 71 2071 2071 HOH HOH B . L 7 HOH 72 2072 2072 HOH HOH B . L 7 HOH 73 2073 2073 HOH HOH B . L 7 HOH 74 2074 2074 HOH HOH B . L 7 HOH 75 2075 2075 HOH HOH B . L 7 HOH 76 2076 2076 HOH HOH B . L 7 HOH 77 2077 2077 HOH HOH B . L 7 HOH 78 2078 2078 HOH HOH B . L 7 HOH 79 2079 2079 HOH HOH B . L 7 HOH 80 2080 2080 HOH HOH B . L 7 HOH 81 2081 2081 HOH HOH B . L 7 HOH 82 2082 2082 HOH HOH B . L 7 HOH 83 2083 2083 HOH HOH B . L 7 HOH 84 2084 2084 HOH HOH B . L 7 HOH 85 2085 2085 HOH HOH B . L 7 HOH 86 2086 2086 HOH HOH B . L 7 HOH 87 2087 2087 HOH HOH B . L 7 HOH 88 2088 2088 HOH HOH B . L 7 HOH 89 2089 2089 HOH HOH B . L 7 HOH 90 2090 2090 HOH HOH B . L 7 HOH 91 2091 2091 HOH HOH B . L 7 HOH 92 2092 2092 HOH HOH B . L 7 HOH 93 2093 2093 HOH HOH B . L 7 HOH 94 2094 2094 HOH HOH B . L 7 HOH 95 2095 2095 HOH HOH B . L 7 HOH 96 2096 2096 HOH HOH B . L 7 HOH 97 2097 2097 HOH HOH B . L 7 HOH 98 2098 2098 HOH HOH B . L 7 HOH 99 2099 2099 HOH HOH B . L 7 HOH 100 2100 2100 HOH HOH B . L 7 HOH 101 2101 2101 HOH HOH B . L 7 HOH 102 2102 2102 HOH HOH B . L 7 HOH 103 2103 2103 HOH HOH B . L 7 HOH 104 2104 2104 HOH HOH B . L 7 HOH 105 2105 2105 HOH HOH B . L 7 HOH 106 2106 2106 HOH HOH B . L 7 HOH 107 2107 2107 HOH HOH B . L 7 HOH 108 2108 2108 HOH HOH B . L 7 HOH 109 2109 2109 HOH HOH B . L 7 HOH 110 2110 2110 HOH HOH B . L 7 HOH 111 2111 2111 HOH HOH B . L 7 HOH 112 2112 2112 HOH HOH B . L 7 HOH 113 3001 3001 HOH HOH B . L 7 HOH 114 3002 3002 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 A MSE 388 ? MET SELENOMETHIONINE 2 A MSE 18 A MSE 402 ? MET SELENOMETHIONINE 3 A MSE 29 A MSE 413 ? MET SELENOMETHIONINE 4 A MSE 65 A MSE 449 ? MET SELENOMETHIONINE 5 A MSE 73 A MSE 457 ? MET SELENOMETHIONINE 6 A MSE 74 A MSE 458 ? MET SELENOMETHIONINE 7 A MSE 80 A MSE 464 ? MET SELENOMETHIONINE 8 A MSE 86 A MSE 470 ? MET SELENOMETHIONINE 9 A MSE 112 A MSE 496 ? MET SELENOMETHIONINE 10 B MSE 4 B MSE 388 ? MET SELENOMETHIONINE 11 B MSO 18 B MSO 402 ? MET 'SELENOMETHIONINE SELENOXIDE' 12 B MSE 29 B MSE 413 ? MET SELENOMETHIONINE 13 B MSO 65 B MSO 449 ? MET 'SELENOMETHIONINE SELENOXIDE' 14 B MSE 73 B MSE 457 ? MET SELENOMETHIONINE 15 B MSE 74 B MSE 458 ? MET SELENOMETHIONINE 16 B MSE 80 B MSE 464 ? MET SELENOMETHIONINE 17 B MSE 86 B MSE 470 ? MET SELENOMETHIONINE 18 B MSE 112 B MSE 496 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2700 ? 1 MORE -21.6 ? 1 'SSA (A^2)' 14330 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SE ? A MSE 65 ? A MSE 449 ? 1_555 K ? F K . ? A K 1503 ? 1_555 O ? K HOH . ? A HOH 2091 ? 1_555 108.7 ? 2 OE ? B MSO 65 ? B MSO 449 ? 1_555 NA ? J NA . ? B NA 1504 ? 1_555 O ? L HOH . ? B HOH 2073 ? 1_555 129.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-03-21 2 'Structure model' 1 1 2018-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_id_ISSN' 2 2 'Structure model' '_citation.page_last' 3 2 'Structure model' '_citation.pdbx_database_id_DOI' 4 2 'Structure model' '_citation.title' 5 2 'Structure model' '_citation_author.name' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 SOLVE phasing via ? 4 # _pdbx_entry_details.entry_id 4AE4 _pdbx_entry_details.compound_details ;ENGINEERED RESIDUE IN CHAIN A, LYS 415 TO ALA ENGINEERED RESIDUE IN CHAIN A, LYS 416 TO ALA ENGINEERED RESIDUE IN CHAIN A, GLU 418 TO ALA ENGINEERED RESIDUE IN CHAIN B, LYS 415 TO ALA ENGINEERED RESIDUE IN CHAIN B, LYS 416 TO ALA ENGINEERED RESIDUE IN CHAIN B, GLU 418 TO ALA ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;PROTEIN IS ISOFORM 1. RESIDUES 389-502 ARE THE SOUBA DOMAIN AS DEFINED IN OUR PAPER) ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 2014 ? ? O B HOH 2020 ? ? 2.04 2 1 OE1 A GLU 397 ? ? O A HOH 2011 ? ? 2.07 3 1 NE2 B HIS 387 ? ? O B HOH 2003 ? ? 2.10 4 1 OE1 B GLU 459 ? ? O B HOH 2084 ? ? 2.14 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id B _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 3002 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 7.43 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 385 ? A GLY 1 2 1 Y 1 A GLY 500 ? A GLY 116 3 1 Y 1 A ALA 501 ? A ALA 117 4 1 Y 1 A SER 502 ? A SER 118 5 1 Y 1 B GLY 385 ? B GLY 1 6 1 Y 1 B ALA 501 ? B ALA 117 7 1 Y 1 B SER 502 ? B SER 118 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' NHE 4 'POTASSIUM ION' K 5 GLYCEROL GOL 6 'SODIUM ION' NA 7 water HOH #