HEADER TRANSFERASE/INHIBITOR 16-JAN-12 4AF3 TITLE HUMAN AURORA B KINASE IN COMPLEX WITH INCENP AND VX-680 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AURORA KINASE B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 55-344; COMPND 5 SYNONYM: AURORA 1, AURORA B, AURORA- AND IPL1-LIKE MIDBODY-ASSOCIATED COMPND 6 PROTEIN 1, AIM-1, AURORA/IPL1-RELATED KINASE 2, ARK-2, AURORA-RELATED COMPND 7 KINASE 2, STK-1, SERINE/THREONINE 12 -PROTEIN KINASE COMPND 8 SERINE/THREONINE-PROTEIN KINASE 5, SERINE/THREONINE-PROTEIN KINASE COMPND 9 AURORA-B; COMPND 10 EC: 2.7.11.1; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 2; COMPND 13 MOLECULE: INNER CENTROMERE PROTEIN; COMPND 14 CHAIN: D; COMPND 15 FRAGMENT: RESIDUES 835-903; COMPND 16 SYNONYM: INCENP; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4; SOURCE 9 OTHER_DETAILS: MAMMALIAN GENE COLLECTION IMAGE 2819846; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_PLASMID: PGTVL1-SGC KEYWDS TRANSFERASE-INHIBITOR COMPLEX, AURKB EXPDTA X-RAY DIFFRACTION AUTHOR J.M.ELKINS,M.VOLLMAR,J.WANG,S.PICAUD,C.H.ARROWSMITH,A.EDWARDS, AUTHOR 2 C.BOUNTRA,F.VON DELFT,S.KNAPP REVDAT 4 20-DEC-23 4AF3 1 REMARK REVDAT 3 24-JAN-18 4AF3 1 AUTHOR REVDAT 2 26-SEP-12 4AF3 1 COMPND JRNL REVDAT 1 11-APR-12 4AF3 0 JRNL AUTH J.M.ELKINS,S.SANTAGUIDA,A.MUSACCHIO,S.KNAPP JRNL TITL CRYSTAL STRUCTURE OF HUMAN AURORA B IN COMPLEX WITH INCENP JRNL TITL 2 AND VX-680. JRNL REF J.MED.CHEM. V. 55 7841 2012 JRNL REFN ISSN 0022-2623 JRNL PMID 22920039 JRNL DOI 10.1021/JM3008954 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 69.41 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 8815 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 452 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 583 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.84 REMARK 3 BIN R VALUE (WORKING SET) : 0.3200 REMARK 3 BIN FREE R VALUE SET COUNT : 26 REMARK 3 BIN FREE R VALUE : 0.3410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2363 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 31 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.23000 REMARK 3 B22 (A**2) : 2.23000 REMARK 3 B33 (A**2) : -3.35000 REMARK 3 B12 (A**2) : 1.12000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.388 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.332 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 34.154 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2462 ; 0.008 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1683 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3348 ; 1.218 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4094 ; 0.972 ; 3.006 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 293 ; 6.031 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 112 ;37.016 ;23.304 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 400 ;16.193 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;18.750 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 365 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2705 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 505 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 70 A 217 REMARK 3 ORIGIN FOR THE GROUP (A): 13.6707 -20.8930 -7.7527 REMARK 3 T TENSOR REMARK 3 T11: 0.2181 T22: 0.1658 REMARK 3 T33: 0.2100 T12: -0.0324 REMARK 3 T13: 0.0124 T23: -0.0190 REMARK 3 L TENSOR REMARK 3 L11: 0.7220 L22: 4.4921 REMARK 3 L33: 2.8008 L12: 1.4852 REMARK 3 L13: 0.0529 L23: 0.8775 REMARK 3 S TENSOR REMARK 3 S11: -0.1657 S12: 0.1804 S13: -0.0530 REMARK 3 S21: -0.0755 S22: 0.1101 S23: 0.1862 REMARK 3 S31: 0.1124 S32: -0.0401 S33: 0.0557 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 218 A 250 REMARK 3 ORIGIN FOR THE GROUP (A): 4.9268 -23.9606 12.1067 REMARK 3 T TENSOR REMARK 3 T11: 0.2749 T22: 0.2070 REMARK 3 T33: 0.4151 T12: -0.0141 REMARK 3 T13: 0.1381 T23: 0.1025 REMARK 3 L TENSOR REMARK 3 L11: 19.0753 L22: 4.5240 REMARK 3 L33: 14.6935 L12: 3.7427 REMARK 3 L13: -12.4042 L23: -3.2724 REMARK 3 S TENSOR REMARK 3 S11: 0.0857 S12: -0.5127 S13: 0.7908 REMARK 3 S21: -0.3687 S22: -0.6948 S23: -0.7444 REMARK 3 S31: -0.0345 S32: 0.7368 S33: 0.6091 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 251 A 338 REMARK 3 ORIGIN FOR THE GROUP (A): 23.7511 -4.6917 7.3006 REMARK 3 T TENSOR REMARK 3 T11: 0.1259 T22: 0.0475 REMARK 3 T33: 0.0915 T12: -0.0620 REMARK 3 T13: 0.0223 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 3.6031 L22: 4.1833 REMARK 3 L33: 10.0127 L12: -1.4123 REMARK 3 L13: 1.6392 L23: -1.8747 REMARK 3 S TENSOR REMARK 3 S11: -0.1491 S12: -0.1076 S13: -0.0882 REMARK 3 S21: 0.0396 S22: 0.1026 S23: 0.0070 REMARK 3 S31: -0.4966 S32: 0.0257 S33: 0.0465 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 840 D 882 REMARK 3 ORIGIN FOR THE GROUP (A): 9.4757 -23.0102 -17.7703 REMARK 3 T TENSOR REMARK 3 T11: 0.3837 T22: 0.3688 REMARK 3 T33: 0.2567 T12: -0.0615 REMARK 3 T13: -0.0546 T23: -0.0304 REMARK 3 L TENSOR REMARK 3 L11: 1.4074 L22: 5.2218 REMARK 3 L33: 4.1238 L12: 1.2021 REMARK 3 L13: 0.1859 L23: -1.6262 REMARK 3 S TENSOR REMARK 3 S11: 0.1282 S12: 0.3613 S13: 0.0108 REMARK 3 S21: -0.4223 S22: 0.0973 S23: 0.5146 REMARK 3 S31: -0.1855 S32: 0.0492 S33: -0.2255 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED REMARK 4 REMARK 4 4AF3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1290050938. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.15 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS, SAWAYA ANISOTROPY REMARK 200 SERVER REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9289 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 19.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 11.80 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.93600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2BFX REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% W/V PEG 3350, 0.2 M KSCN, 10% REMARK 280 ETHYLENE GLYCOL, 0.1 M BIS-TRISPROPANE PH 6.15 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.84733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 61.69467 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 61.69467 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 30.84733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 53 REMARK 465 MET A 54 REMARK 465 GLN A 55 REMARK 465 LYS A 56 REMARK 465 VAL A 57 REMARK 465 MET A 58 REMARK 465 GLU A 59 REMARK 465 ASN A 60 REMARK 465 SER A 61 REMARK 465 SER A 62 REMARK 465 GLY A 63 REMARK 465 THR A 64 REMARK 465 PRO A 65 REMARK 465 ASP A 66 REMARK 465 ILE A 67 REMARK 465 LEU A 68 REMARK 465 THR A 69 REMARK 465 TRP A 221 REMARK 465 SER A 222 REMARK 465 VAL A 223 REMARK 465 HIS A 224 REMARK 465 ALA A 225 REMARK 465 PRO A 226 REMARK 465 SER A 227 REMARK 465 LEU A 228 REMARK 465 ARG A 229 REMARK 465 ARG A 230 REMARK 465 LYS A 231 REMARK 465 THR A 232 REMARK 465 MET A 233 REMARK 465 CYS A 234 REMARK 465 GLY A 235 REMARK 465 THR A 236 REMARK 465 ALA A 339 REMARK 465 LEU A 340 REMARK 465 GLN A 341 REMARK 465 SER A 342 REMARK 465 VAL A 343 REMARK 465 ALA A 344 REMARK 465 SER D 833 REMARK 465 MET D 834 REMARK 465 GLU D 835 REMARK 465 ALA D 836 REMARK 465 HIS D 837 REMARK 465 PRO D 838 REMARK 465 ARG D 839 REMARK 465 LYS D 883 REMARK 465 SER D 884 REMARK 465 LYS D 885 REMARK 465 PRO D 886 REMARK 465 ARG D 887 REMARK 465 TYR D 888 REMARK 465 HIS D 889 REMARK 465 LYS D 890 REMARK 465 ARG D 891 REMARK 465 THR D 892 REMARK 465 SER D 893 REMARK 465 SER D 894 REMARK 465 ALA D 895 REMARK 465 VAL D 896 REMARK 465 TRP D 897 REMARK 465 ASN D 898 REMARK 465 SER D 899 REMARK 465 PRO D 900 REMARK 465 PRO D 901 REMARK 465 LEU D 902 REMARK 465 GLN D 903 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 70 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 71 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 85 CD CE NZ REMARK 470 LYS A 87 CD CE NZ REMARK 470 LYS A 98 NZ REMARK 470 GLU A 114 CD OE1 OE2 REMARK 470 ARG A 147 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 168 CE NZ REMARK 470 LYS A 195 CG CD CE NZ REMARK 470 LYS A 202 CD CE NZ REMARK 470 LYS A 211 CE NZ REMARK 470 ASP A 218 CG OD1 OD2 REMARK 470 LYS A 253 NZ REMARK 470 LYS A 287 CG CD CE NZ REMARK 470 ARG A 332 CG CD NE CZ NH1 NH2 REMARK 470 SER A 338 OG REMARK 470 LYS D 840 CG CD CE NZ REMARK 470 ARG D 847 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 882 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 131 60.01 -118.69 REMARK 500 ASN A 142 -177.69 -170.01 REMARK 500 ASP A 146 -166.00 -118.03 REMARK 500 CYS A 170 -62.46 76.80 REMARK 500 LYS A 202 137.03 -32.04 REMARK 500 ARG A 248 47.73 -84.52 REMARK 500 VAL A 288 65.39 30.82 REMARK 500 ARG A 332 79.77 -118.71 REMARK 500 PRO A 337 61.61 -64.66 REMARK 500 ASP D 879 39.11 -73.80 REMARK 500 ILE D 880 -55.60 -152.79 REMARK 500 PHE D 881 39.11 -98.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VX6 A 500 DBREF 4AF3 A 55 344 UNP Q96GD4 AURKB_HUMAN 55 344 DBREF 4AF3 D 835 903 UNP Q9NQS7 INCE_HUMAN 835 903 SEQADV 4AF3 SER A 53 UNP Q96GD4 EXPRESSION TAG SEQADV 4AF3 MET A 54 UNP Q96GD4 EXPRESSION TAG SEQADV 4AF3 THR A 298 UNP Q96GD4 MET 298 VARIANT SEQADV 4AF3 SER D 833 UNP Q9NQS7 EXPRESSION TAG SEQADV 4AF3 MET D 834 UNP Q9NQS7 EXPRESSION TAG SEQRES 1 A 292 SER MET GLN LYS VAL MET GLU ASN SER SER GLY THR PRO SEQRES 2 A 292 ASP ILE LEU THR ARG HIS PHE THR ILE ASP ASP PHE GLU SEQRES 3 A 292 ILE GLY ARG PRO LEU GLY LYS GLY LYS PHE GLY ASN VAL SEQRES 4 A 292 TYR LEU ALA ARG GLU LYS LYS SER HIS PHE ILE VAL ALA SEQRES 5 A 292 LEU LYS VAL LEU PHE LYS SER GLN ILE GLU LYS GLU GLY SEQRES 6 A 292 VAL GLU HIS GLN LEU ARG ARG GLU ILE GLU ILE GLN ALA SEQRES 7 A 292 HIS LEU HIS HIS PRO ASN ILE LEU ARG LEU TYR ASN TYR SEQRES 8 A 292 PHE TYR ASP ARG ARG ARG ILE TYR LEU ILE LEU GLU TYR SEQRES 9 A 292 ALA PRO ARG GLY GLU LEU TYR LYS GLU LEU GLN LYS SER SEQRES 10 A 292 CYS THR PHE ASP GLU GLN ARG THR ALA THR ILE MET GLU SEQRES 11 A 292 GLU LEU ALA ASP ALA LEU MET TYR CYS HIS GLY LYS LYS SEQRES 12 A 292 VAL ILE HIS ARG ASP ILE LYS PRO GLU ASN LEU LEU LEU SEQRES 13 A 292 GLY LEU LYS GLY GLU LEU LYS ILE ALA ASP PHE GLY TRP SEQRES 14 A 292 SER VAL HIS ALA PRO SER LEU ARG ARG LYS THR MET CYS SEQRES 15 A 292 GLY THR LEU ASP TYR LEU PRO PRO GLU MET ILE GLU GLY SEQRES 16 A 292 ARG MET HIS ASN GLU LYS VAL ASP LEU TRP CYS ILE GLY SEQRES 17 A 292 VAL LEU CYS TYR GLU LEU LEU VAL GLY ASN PRO PRO PHE SEQRES 18 A 292 GLU SER ALA SER HIS ASN GLU THR TYR ARG ARG ILE VAL SEQRES 19 A 292 LYS VAL ASP LEU LYS PHE PRO ALA SER VAL PRO THR GLY SEQRES 20 A 292 ALA GLN ASP LEU ILE SER LYS LEU LEU ARG HIS ASN PRO SEQRES 21 A 292 SER GLU ARG LEU PRO LEU ALA GLN VAL SER ALA HIS PRO SEQRES 22 A 292 TRP VAL ARG ALA ASN SER ARG ARG VAL LEU PRO PRO SER SEQRES 23 A 292 ALA LEU GLN SER VAL ALA SEQRES 1 D 71 SER MET GLU ALA HIS PRO ARG LYS PRO ILE PRO THR TRP SEQRES 2 D 71 ALA ARG GLY THR PRO LEU SER GLN ALA ILE ILE HIS GLN SEQRES 3 D 71 TYR TYR HIS PRO PRO ASN LEU LEU GLU LEU PHE GLY THR SEQRES 4 D 71 ILE LEU PRO LEU ASP LEU GLU ASP ILE PHE LYS LYS SER SEQRES 5 D 71 LYS PRO ARG TYR HIS LYS ARG THR SER SER ALA VAL TRP SEQRES 6 D 71 ASN SER PRO PRO LEU GLN HET VX6 A 500 33 HETNAM VX6 CYCLOPROPANECARBOXYLIC ACID {4-[4-(4-METHYL-PIPERAZIN- HETNAM 2 VX6 1-YL)-6-(5-METHYL-2H-PYRAZOL-3-YLAMINO)-PYRIMIDIN-2- HETNAM 3 VX6 YLSULFANYL]-PHENYL}-AMIDE FORMUL 3 VX6 C23 H28 N8 O S FORMUL 4 HOH *31(H2 O) HELIX 1 1 THR A 73 ASP A 75 5 3 HELIX 2 2 LYS A 110 GLY A 117 1 8 HELIX 3 3 VAL A 118 HIS A 131 1 14 HELIX 4 4 GLU A 161 CYS A 170 1 10 HELIX 5 5 ASP A 173 LYS A 194 1 22 HELIX 6 6 LYS A 202 GLU A 204 5 3 HELIX 7 7 PRO A 241 GLU A 246 1 6 HELIX 8 8 GLU A 252 GLY A 269 1 18 HELIX 9 9 SER A 277 LYS A 287 1 11 HELIX 10 10 PRO A 297 LEU A 308 1 12 HELIX 11 11 ASN A 311 ARG A 315 5 5 HELIX 12 12 PRO A 317 ALA A 323 1 7 HELIX 13 13 HIS A 324 SER A 331 1 8 HELIX 14 14 PRO D 843 ALA D 846 5 4 HELIX 15 15 ARG D 847 HIS D 861 1 15 HELIX 16 16 ASN D 864 GLY D 870 1 7 SHEET 1 AA 5 PHE A 77 PRO A 82 0 SHEET 2 AA 5 ASN A 90 GLU A 96 -1 O LEU A 93 N GLY A 80 SHEET 3 AA 5 ILE A 102 PHE A 109 -1 O VAL A 103 N ALA A 94 SHEET 4 AA 5 ARG A 149 GLU A 155 -1 O ILE A 150 N LEU A 108 SHEET 5 AA 5 LEU A 140 TYR A 145 -1 N TYR A 141 O ILE A 153 SHEET 1 AB 2 LEU A 206 LEU A 208 0 SHEET 2 AB 2 LEU A 214 ILE A 216 -1 O LYS A 215 N LEU A 207 SITE 1 AC1 11 LEU A 83 PHE A 88 ALA A 104 LYS A 106 SITE 2 AC1 11 GLU A 155 TYR A 156 ALA A 157 PRO A 158 SITE 3 AC1 11 GLY A 160 LEU A 207 HOH A2015 CRYST1 80.145 80.145 92.542 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012477 0.007204 0.000000 0.00000 SCALE2 0.000000 0.014408 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010806 0.00000