data_4AGJ # _entry.id 4AGJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4AGJ pdb_00004agj 10.2210/pdb4agj/pdb PDBE EBI-51106 ? ? WWPDB D_1290051106 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4AGK _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'CRYSTAL STRUCTURE OF CAPSID PROTEIN (110-267) FROM AURA VIRUS' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4AGJ _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-01-30 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Aggarwal, M.' 1 'Kumar, P.' 2 'Tomar, S.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Crystal Structure of Aura Virus Capsid Protease and its Complex with Dioxane: New Insights Into Capsid-Glycoprotein Molecular Contacts. ; 'Plos One' 7 51288 ? 2012 ? US 1932-6203 ? ? 23251484 10.1371/JOURNAL.PONE.0051288 1 ;Crystallization, High-Resolution Data Collection and Preliminary Crystallographic Analysis of Aura Virus Capsid Protease and its Complex with Dioxane. ; 'Acta Crystallogr.,Sect.F' 67 1394 ? 2011 ? DK 1744-3091 ? ? 22102240 10.1107/S174430911103404X # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Aggarwal, M.' 1 ? primary 'Tapas, S.' 2 ? primary Preeti 3 ? primary 'Siwach, A.' 4 ? primary 'Kumar, P.' 5 ? primary 'Kuhn, R.J.' 6 ? primary 'Tomar, S.' 7 ? 1 'Aggarwal, M.' 8 ? 1 'Dhindwal, S.' 9 ? 1 'Pratap, S.' 10 ? 1 'Kuhn, R.J.' 11 ? 1 'Kumar, P.' 12 ? 1 'Tomar, S.' 13 ? # _cell.entry_id 4AGJ _cell.length_a 79.434 _cell.length_b 35.425 _cell.length_c 49.171 _cell.angle_alpha 90.00 _cell.angle_beta 101.67 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AGJ _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CAPSID PROTEIN' 17009.230 1 3.4.21.90 ? 'RESIDUES 110-267' ? 2 non-polymer syn '1,4-DIETHYLENE DIOXIDE' 88.105 1 ? ? ? ? 3 water nat water 18.015 102 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'COAT PROTEIN, C' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ALKFEADRTFAVKNEDGKIMGYAVAMEGKVIKPLHVKGTIDHPALAKLKFTKSSSYDMEFAKLPTEMKSDAFGYTTEHPE GFYNWHHGAVQFSGGRFTIPTGAGGPGDSGRPILDDSGKVVAIVLGGANEGARTALSVVTWNKKGAAIKTTHEDTVEW ; _entity_poly.pdbx_seq_one_letter_code_can ;ALKFEADRTFAVKNEDGKIMGYAVAMEGKVIKPLHVKGTIDHPALAKLKFTKSSSYDMEFAKLPTEMKSDAFGYTTEHPE GFYNWHHGAVQFSGGRFTIPTGAGGPGDSGRPILDDSGKVVAIVLGGANEGARTALSVVTWNKKGAAIKTTHEDTVEW ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 LEU n 1 3 LYS n 1 4 PHE n 1 5 GLU n 1 6 ALA n 1 7 ASP n 1 8 ARG n 1 9 THR n 1 10 PHE n 1 11 ALA n 1 12 VAL n 1 13 LYS n 1 14 ASN n 1 15 GLU n 1 16 ASP n 1 17 GLY n 1 18 LYS n 1 19 ILE n 1 20 MET n 1 21 GLY n 1 22 TYR n 1 23 ALA n 1 24 VAL n 1 25 ALA n 1 26 MET n 1 27 GLU n 1 28 GLY n 1 29 LYS n 1 30 VAL n 1 31 ILE n 1 32 LYS n 1 33 PRO n 1 34 LEU n 1 35 HIS n 1 36 VAL n 1 37 LYS n 1 38 GLY n 1 39 THR n 1 40 ILE n 1 41 ASP n 1 42 HIS n 1 43 PRO n 1 44 ALA n 1 45 LEU n 1 46 ALA n 1 47 LYS n 1 48 LEU n 1 49 LYS n 1 50 PHE n 1 51 THR n 1 52 LYS n 1 53 SER n 1 54 SER n 1 55 SER n 1 56 TYR n 1 57 ASP n 1 58 MET n 1 59 GLU n 1 60 PHE n 1 61 ALA n 1 62 LYS n 1 63 LEU n 1 64 PRO n 1 65 THR n 1 66 GLU n 1 67 MET n 1 68 LYS n 1 69 SER n 1 70 ASP n 1 71 ALA n 1 72 PHE n 1 73 GLY n 1 74 TYR n 1 75 THR n 1 76 THR n 1 77 GLU n 1 78 HIS n 1 79 PRO n 1 80 GLU n 1 81 GLY n 1 82 PHE n 1 83 TYR n 1 84 ASN n 1 85 TRP n 1 86 HIS n 1 87 HIS n 1 88 GLY n 1 89 ALA n 1 90 VAL n 1 91 GLN n 1 92 PHE n 1 93 SER n 1 94 GLY n 1 95 GLY n 1 96 ARG n 1 97 PHE n 1 98 THR n 1 99 ILE n 1 100 PRO n 1 101 THR n 1 102 GLY n 1 103 ALA n 1 104 GLY n 1 105 GLY n 1 106 PRO n 1 107 GLY n 1 108 ASP n 1 109 SER n 1 110 GLY n 1 111 ARG n 1 112 PRO n 1 113 ILE n 1 114 LEU n 1 115 ASP n 1 116 ASP n 1 117 SER n 1 118 GLY n 1 119 LYS n 1 120 VAL n 1 121 VAL n 1 122 ALA n 1 123 ILE n 1 124 VAL n 1 125 LEU n 1 126 GLY n 1 127 GLY n 1 128 ALA n 1 129 ASN n 1 130 GLU n 1 131 GLY n 1 132 ALA n 1 133 ARG n 1 134 THR n 1 135 ALA n 1 136 LEU n 1 137 SER n 1 138 VAL n 1 139 VAL n 1 140 THR n 1 141 TRP n 1 142 ASN n 1 143 LYS n 1 144 LYS n 1 145 GLY n 1 146 ALA n 1 147 ALA n 1 148 ILE n 1 149 LYS n 1 150 THR n 1 151 THR n 1 152 HIS n 1 153 GLU n 1 154 ASP n 1 155 THR n 1 156 VAL n 1 157 GLU n 1 158 TRP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'AURA VIRUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 44158 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ROSETTA _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET28C _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POLS_AURAV _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q86925 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4AGJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 158 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q86925 _struct_ref_seq.db_align_beg 110 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 267 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 110 _struct_ref_seq.pdbx_auth_seq_align_end 267 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4AGJ ALA A 11 ? UNP Q86925 VAL 120 'SEE REMARK 999' 120 1 1 4AGJ VAL A 12 ? UNP Q86925 GLY 121 'SEE REMARK 999' 121 2 1 4AGJ GLY A 81 ? UNP Q86925 VAL 190 'SEE REMARK 999' 190 3 1 4AGJ ALA A 103 ? UNP Q86925 VAL 212 'SEE REMARK 999' 212 4 1 4AGJ ASP A 116 ? UNP Q86925 ASN 225 'SEE REMARK 999' 225 5 1 4AGJ GLY A 131 ? UNP Q86925 VAL 240 'SEE REMARK 999' 240 6 1 4AGJ ALA A 132 ? UNP Q86925 PRO 241 'SEE REMARK 999' 241 7 1 4AGJ ARG A 133 ? UNP Q86925 GLY 242 'SEE REMARK 999' 242 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DIO non-polymer . '1,4-DIETHYLENE DIOXIDE' ? 'C4 H8 O2' 88.105 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4AGJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.99 _exptl_crystal.density_percent_sol 38.31 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'BIS-TRIS AND POLYETHYLENE GLYCOL MONOMETHYL ETHER 2000' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2010-12-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'BRUKER AXS MICROSTAR-H' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4AGJ _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.98 _reflns.number_obs 7989 _reflns.number_all ? _reflns.percent_possible_obs 83.9 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20.34 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.1 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.98 _reflns_shell.d_res_low 2.01 _reflns_shell.percent_possible_all 33.6 _reflns_shell.Rmerge_I_obs 0.29 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.00 _reflns_shell.pdbx_redundancy 1.9 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4AGJ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 7600 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 48.17 _refine.ls_d_res_high 1.98 _refine.ls_percent_reflns_obs 83.71 _refine.ls_R_factor_obs 0.18319 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17906 _refine.ls_R_factor_R_free 0.26757 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 388 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.922 _refine.B_iso_mean 36.728 _refine.aniso_B[1][1] -0.95 _refine.aniso_B[2][2] 0.72 _refine.aniso_B[3][3] -0.30 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -1.30 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 1KXA' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.268 _refine.pdbx_overall_ESU_R_Free 0.232 _refine.overall_SU_ML 0.148 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 9.617 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1152 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 102 _refine_hist.number_atoms_total 1260 _refine_hist.d_res_high 1.98 _refine_hist.d_res_low 48.17 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.020 ? 1187 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.926 1.949 ? 1603 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.827 5.000 ? 151 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 31.005 24.043 ? 47 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.585 15.000 ? 193 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 23.726 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.113 0.200 ? 171 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.021 ? 895 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.978 _refine_ls_shell.d_res_low 2.029 _refine_ls_shell.number_reflns_R_work 128 _refine_ls_shell.R_factor_R_work 0.318 _refine_ls_shell.percent_reflns_obs 20.12 _refine_ls_shell.R_factor_R_free 0.725 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 7 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 4AGJ _struct.title 'Crystal structure of the capsid protein (110-267) from Aura virus in complex with dioxane' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4AGJ _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'HYDROLASE, VIRAL PROTEIN, DIOXANE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id PRO _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 64 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LYS _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 68 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id PRO _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 173 _struct_conf.end_auth_comp_id LYS _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 177 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details 1 ? 1 ? 2 ? 1 ? 3 ? 1 ? 4 ? 1 ? 5 ? 1 ? 6 ? 1 ? 7 ? 1 ? 8 ? 1 ? 9 ? 1 ? 10 ? 1 ? 11 ? 1 ? 12 ? 1 ? 13 ? 1 ? 14 ? 1 ? # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id 1 1 THR A 9 ? LYS A 13 ? THR A 118 LYS A 122 2 1 ILE A 19 ? MET A 26 ? ILE A 128 MET A 135 3 1 LYS A 29 ? PRO A 33 ? LYS A 138 PRO A 142 4 1 THR A 39 ? ILE A 40 ? THR A 148 ILE A 149 5 1 THR A 51 ? SER A 53 ? THR A 160 SER A 162 6 1 MET A 58 ? LYS A 62 ? MET A 167 LYS A 171 7 1 GLY A 81 ? TRP A 85 ? GLY A 190 TRP A 194 8 1 GLY A 88 ? SER A 93 ? GLY A 197 SER A 202 9 1 ARG A 96 ? PRO A 100 ? ARG A 205 PRO A 209 10 1 PRO A 112 ? LEU A 114 ? PRO A 221 LEU A 223 11 1 VAL A 120 ? ASN A 129 ? VAL A 229 ASN A 238 12 1 ARG A 133 ? TRP A 141 ? ARG A 242 TRP A 250 13 1 ALA A 147 ? THR A 150 ? ALA A 256 THR A 259 14 1 VAL A 156 ? GLU A 157 ? VAL A 265 GLU A 266 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id DIO _struct_site.pdbx_auth_seq_id 1159 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE DIO A 1159' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 MET A 26 ? MET A 135 . ? 1_555 ? 2 AC1 5 GLU A 27 ? GLU A 136 . ? 1_555 ? 3 AC1 5 LYS A 29 ? LYS A 138 . ? 1_555 ? 4 AC1 5 TYR A 74 ? TYR A 183 . ? 1_555 ? 5 AC1 5 TRP A 141 ? TRP A 250 . ? 1_555 ? # _database_PDB_matrix.entry_id 4AGJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4AGJ _atom_sites.fract_transf_matrix[1][1] 0.012589 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002600 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028229 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020766 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 110 ? ? ? A . n A 1 2 LEU 2 111 ? ? ? A . n A 1 3 LYS 3 112 ? ? ? A . n A 1 4 PHE 4 113 ? ? ? A . n A 1 5 GLU 5 114 ? ? ? A . n A 1 6 ALA 6 115 ? ? ? A . n A 1 7 ASP 7 116 116 ASP ASP A . n A 1 8 ARG 8 117 117 ARG ARG A . n A 1 9 THR 9 118 118 THR THR A . n A 1 10 PHE 10 119 119 PHE PHE A . n A 1 11 ALA 11 120 120 ALA ALA A . n A 1 12 VAL 12 121 121 VAL VAL A . n A 1 13 LYS 13 122 122 LYS LYS A . n A 1 14 ASN 14 123 123 ASN ASN A . n A 1 15 GLU 15 124 124 GLU GLU A . n A 1 16 ASP 16 125 125 ASP ASP A . n A 1 17 GLY 17 126 126 GLY GLY A . n A 1 18 LYS 18 127 127 LYS LYS A . n A 1 19 ILE 19 128 128 ILE ILE A . n A 1 20 MET 20 129 129 MET MET A . n A 1 21 GLY 21 130 130 GLY GLY A . n A 1 22 TYR 22 131 131 TYR TYR A . n A 1 23 ALA 23 132 132 ALA ALA A . n A 1 24 VAL 24 133 133 VAL VAL A . n A 1 25 ALA 25 134 134 ALA ALA A . n A 1 26 MET 26 135 135 MET MET A . n A 1 27 GLU 27 136 136 GLU GLU A . n A 1 28 GLY 28 137 137 GLY GLY A . n A 1 29 LYS 29 138 138 LYS LYS A . n A 1 30 VAL 30 139 139 VAL VAL A . n A 1 31 ILE 31 140 140 ILE ILE A . n A 1 32 LYS 32 141 141 LYS LYS A . n A 1 33 PRO 33 142 142 PRO PRO A . n A 1 34 LEU 34 143 143 LEU LEU A . n A 1 35 HIS 35 144 144 HIS HIS A . n A 1 36 VAL 36 145 145 VAL VAL A . n A 1 37 LYS 37 146 146 LYS LYS A . n A 1 38 GLY 38 147 147 GLY GLY A . n A 1 39 THR 39 148 148 THR THR A . n A 1 40 ILE 40 149 149 ILE ILE A . n A 1 41 ASP 41 150 150 ASP ASP A . n A 1 42 HIS 42 151 151 HIS HIS A . n A 1 43 PRO 43 152 152 PRO PRO A . n A 1 44 ALA 44 153 153 ALA ALA A . n A 1 45 LEU 45 154 154 LEU LEU A . n A 1 46 ALA 46 155 155 ALA ALA A . n A 1 47 LYS 47 156 156 LYS LYS A . n A 1 48 LEU 48 157 157 LEU LEU A . n A 1 49 LYS 49 158 158 LYS LYS A . n A 1 50 PHE 50 159 159 PHE PHE A . n A 1 51 THR 51 160 160 THR THR A . n A 1 52 LYS 52 161 161 LYS LYS A . n A 1 53 SER 53 162 162 SER SER A . n A 1 54 SER 54 163 163 SER SER A . n A 1 55 SER 55 164 164 SER SER A . n A 1 56 TYR 56 165 165 TYR TYR A . n A 1 57 ASP 57 166 166 ASP ASP A . n A 1 58 MET 58 167 167 MET MET A . n A 1 59 GLU 59 168 168 GLU GLU A . n A 1 60 PHE 60 169 169 PHE PHE A . n A 1 61 ALA 61 170 170 ALA ALA A . n A 1 62 LYS 62 171 171 LYS LYS A . n A 1 63 LEU 63 172 172 LEU LEU A . n A 1 64 PRO 64 173 173 PRO PRO A . n A 1 65 THR 65 174 174 THR THR A . n A 1 66 GLU 66 175 175 GLU GLU A . n A 1 67 MET 67 176 176 MET MET A . n A 1 68 LYS 68 177 177 LYS LYS A . n A 1 69 SER 69 178 178 SER SER A . n A 1 70 ASP 70 179 179 ASP ASP A . n A 1 71 ALA 71 180 180 ALA ALA A . n A 1 72 PHE 72 181 181 PHE PHE A . n A 1 73 GLY 73 182 182 GLY GLY A . n A 1 74 TYR 74 183 183 TYR TYR A . n A 1 75 THR 75 184 184 THR THR A . n A 1 76 THR 76 185 185 THR THR A . n A 1 77 GLU 77 186 186 GLU GLU A . n A 1 78 HIS 78 187 187 HIS HIS A . n A 1 79 PRO 79 188 188 PRO PRO A . n A 1 80 GLU 80 189 189 GLU GLU A . n A 1 81 GLY 81 190 190 GLY GLY A . n A 1 82 PHE 82 191 191 PHE PHE A . n A 1 83 TYR 83 192 192 TYR TYR A . n A 1 84 ASN 84 193 193 ASN ASN A . n A 1 85 TRP 85 194 194 TRP TRP A . n A 1 86 HIS 86 195 195 HIS HIS A . n A 1 87 HIS 87 196 196 HIS HIS A . n A 1 88 GLY 88 197 197 GLY GLY A . n A 1 89 ALA 89 198 198 ALA ALA A . n A 1 90 VAL 90 199 199 VAL VAL A . n A 1 91 GLN 91 200 200 GLN GLN A . n A 1 92 PHE 92 201 201 PHE PHE A . n A 1 93 SER 93 202 202 SER SER A . n A 1 94 GLY 94 203 203 GLY GLY A . n A 1 95 GLY 95 204 204 GLY GLY A . n A 1 96 ARG 96 205 205 ARG ARG A . n A 1 97 PHE 97 206 206 PHE PHE A . n A 1 98 THR 98 207 207 THR THR A . n A 1 99 ILE 99 208 208 ILE ILE A . n A 1 100 PRO 100 209 209 PRO PRO A . n A 1 101 THR 101 210 210 THR THR A . n A 1 102 GLY 102 211 211 GLY GLY A . n A 1 103 ALA 103 212 212 ALA ALA A . n A 1 104 GLY 104 213 213 GLY GLY A . n A 1 105 GLY 105 214 214 GLY GLY A . n A 1 106 PRO 106 215 215 PRO PRO A . n A 1 107 GLY 107 216 216 GLY GLY A . n A 1 108 ASP 108 217 217 ASP ASP A . n A 1 109 SER 109 218 218 SER SER A . n A 1 110 GLY 110 219 219 GLY GLY A . n A 1 111 ARG 111 220 220 ARG ARG A . n A 1 112 PRO 112 221 221 PRO PRO A . n A 1 113 ILE 113 222 222 ILE ILE A . n A 1 114 LEU 114 223 223 LEU LEU A . n A 1 115 ASP 115 224 224 ASP ASP A . n A 1 116 ASP 116 225 225 ASP ASP A . n A 1 117 SER 117 226 226 SER SER A . n A 1 118 GLY 118 227 227 GLY GLY A . n A 1 119 LYS 119 228 228 LYS LYS A . n A 1 120 VAL 120 229 229 VAL VAL A . n A 1 121 VAL 121 230 230 VAL VAL A . n A 1 122 ALA 122 231 231 ALA ALA A . n A 1 123 ILE 123 232 232 ILE ILE A . n A 1 124 VAL 124 233 233 VAL VAL A . n A 1 125 LEU 125 234 234 LEU LEU A . n A 1 126 GLY 126 235 235 GLY GLY A . n A 1 127 GLY 127 236 236 GLY GLY A . n A 1 128 ALA 128 237 237 ALA ALA A . n A 1 129 ASN 129 238 238 ASN ASN A . n A 1 130 GLU 130 239 239 GLU GLU A . n A 1 131 GLY 131 240 240 GLY GLY A . n A 1 132 ALA 132 241 241 ALA ALA A . n A 1 133 ARG 133 242 242 ARG ARG A . n A 1 134 THR 134 243 243 THR THR A . n A 1 135 ALA 135 244 244 ALA ALA A . n A 1 136 LEU 136 245 245 LEU LEU A . n A 1 137 SER 137 246 246 SER SER A . n A 1 138 VAL 138 247 247 VAL VAL A . n A 1 139 VAL 139 248 248 VAL VAL A . n A 1 140 THR 140 249 249 THR THR A . n A 1 141 TRP 141 250 250 TRP TRP A . n A 1 142 ASN 142 251 251 ASN ASN A . n A 1 143 LYS 143 252 252 LYS LYS A . n A 1 144 LYS 144 253 253 LYS LYS A . n A 1 145 GLY 145 254 254 GLY GLY A . n A 1 146 ALA 146 255 255 ALA ALA A . n A 1 147 ALA 147 256 256 ALA ALA A . n A 1 148 ILE 148 257 257 ILE ILE A . n A 1 149 LYS 149 258 258 LYS LYS A . n A 1 150 THR 150 259 259 THR THR A . n A 1 151 THR 151 260 260 THR THR A . n A 1 152 HIS 152 261 261 HIS HIS A . n A 1 153 GLU 153 262 262 GLU GLU A . n A 1 154 ASP 154 263 263 ASP ASP A . n A 1 155 THR 155 264 264 THR THR A . n A 1 156 VAL 156 265 265 VAL VAL A . n A 1 157 GLU 157 266 266 GLU GLU A . n A 1 158 TRP 158 267 267 TRP TRP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DIO 1 1159 1159 DIO DIO A . C 3 HOH 1 2001 2001 HOH HOH A . C 3 HOH 2 2002 2002 HOH HOH A . C 3 HOH 3 2003 2003 HOH HOH A . C 3 HOH 4 2004 2004 HOH HOH A . C 3 HOH 5 2005 2005 HOH HOH A . C 3 HOH 6 2006 2006 HOH HOH A . C 3 HOH 7 2007 2007 HOH HOH A . C 3 HOH 8 2008 2008 HOH HOH A . C 3 HOH 9 2009 2009 HOH HOH A . C 3 HOH 10 2010 2010 HOH HOH A . C 3 HOH 11 2011 2011 HOH HOH A . C 3 HOH 12 2012 2012 HOH HOH A . C 3 HOH 13 2013 2013 HOH HOH A . C 3 HOH 14 2014 2014 HOH HOH A . C 3 HOH 15 2015 2015 HOH HOH A . C 3 HOH 16 2016 2016 HOH HOH A . C 3 HOH 17 2017 2017 HOH HOH A . C 3 HOH 18 2018 2018 HOH HOH A . C 3 HOH 19 2019 2019 HOH HOH A . C 3 HOH 20 2020 2020 HOH HOH A . C 3 HOH 21 2021 2021 HOH HOH A . C 3 HOH 22 2022 2022 HOH HOH A . C 3 HOH 23 2023 2023 HOH HOH A . C 3 HOH 24 2024 2024 HOH HOH A . C 3 HOH 25 2025 2025 HOH HOH A . C 3 HOH 26 2026 2026 HOH HOH A . C 3 HOH 27 2027 2027 HOH HOH A . C 3 HOH 28 2028 2028 HOH HOH A . C 3 HOH 29 2029 2029 HOH HOH A . C 3 HOH 30 2030 2030 HOH HOH A . C 3 HOH 31 2031 2031 HOH HOH A . C 3 HOH 32 2032 2032 HOH HOH A . C 3 HOH 33 2033 2033 HOH HOH A . C 3 HOH 34 2034 2034 HOH HOH A . C 3 HOH 35 2035 2035 HOH HOH A . C 3 HOH 36 2036 2036 HOH HOH A . C 3 HOH 37 2037 2037 HOH HOH A . C 3 HOH 38 2038 2038 HOH HOH A . C 3 HOH 39 2039 2039 HOH HOH A . C 3 HOH 40 2040 2040 HOH HOH A . C 3 HOH 41 2041 2041 HOH HOH A . C 3 HOH 42 2042 2042 HOH HOH A . C 3 HOH 43 2043 2043 HOH HOH A . C 3 HOH 44 2044 2044 HOH HOH A . C 3 HOH 45 2045 2045 HOH HOH A . C 3 HOH 46 2046 2046 HOH HOH A . C 3 HOH 47 2047 2047 HOH HOH A . C 3 HOH 48 2048 2048 HOH HOH A . C 3 HOH 49 2049 2049 HOH HOH A . C 3 HOH 50 2050 2050 HOH HOH A . C 3 HOH 51 2051 2051 HOH HOH A . C 3 HOH 52 2052 2052 HOH HOH A . C 3 HOH 53 2053 2053 HOH HOH A . C 3 HOH 54 2054 2054 HOH HOH A . C 3 HOH 55 2055 2055 HOH HOH A . C 3 HOH 56 2056 2056 HOH HOH A . C 3 HOH 57 2057 2057 HOH HOH A . C 3 HOH 58 2058 2058 HOH HOH A . C 3 HOH 59 2059 2059 HOH HOH A . C 3 HOH 60 2060 2060 HOH HOH A . C 3 HOH 61 2061 2061 HOH HOH A . C 3 HOH 62 2062 2062 HOH HOH A . C 3 HOH 63 2063 2063 HOH HOH A . C 3 HOH 64 2064 2064 HOH HOH A . C 3 HOH 65 2065 2065 HOH HOH A . C 3 HOH 66 2066 2066 HOH HOH A . C 3 HOH 67 2067 2067 HOH HOH A . C 3 HOH 68 2068 2068 HOH HOH A . C 3 HOH 69 2069 2069 HOH HOH A . C 3 HOH 70 2070 2070 HOH HOH A . C 3 HOH 71 2071 2071 HOH HOH A . C 3 HOH 72 2072 2072 HOH HOH A . C 3 HOH 73 2073 2073 HOH HOH A . C 3 HOH 74 2074 2074 HOH HOH A . C 3 HOH 75 2075 2075 HOH HOH A . C 3 HOH 76 2076 2076 HOH HOH A . C 3 HOH 77 2077 2077 HOH HOH A . C 3 HOH 78 2078 2078 HOH HOH A . C 3 HOH 79 2079 2079 HOH HOH A . C 3 HOH 80 2080 2080 HOH HOH A . C 3 HOH 81 2081 2081 HOH HOH A . C 3 HOH 82 2082 2082 HOH HOH A . C 3 HOH 83 2083 2083 HOH HOH A . C 3 HOH 84 2084 2084 HOH HOH A . C 3 HOH 85 2085 2085 HOH HOH A . C 3 HOH 86 2086 2086 HOH HOH A . C 3 HOH 87 2087 2087 HOH HOH A . C 3 HOH 88 2088 2088 HOH HOH A . C 3 HOH 89 2089 2089 HOH HOH A . C 3 HOH 90 2090 2090 HOH HOH A . C 3 HOH 91 2091 2091 HOH HOH A . C 3 HOH 92 2092 2092 HOH HOH A . C 3 HOH 93 2093 2093 HOH HOH A . C 3 HOH 94 2094 2094 HOH HOH A . C 3 HOH 95 2095 2095 HOH HOH A . C 3 HOH 96 2096 2096 HOH HOH A . C 3 HOH 97 2097 2097 HOH HOH A . C 3 HOH 98 2098 2098 HOH HOH A . C 3 HOH 99 2099 2099 HOH HOH A . C 3 HOH 100 2100 2100 HOH HOH A . C 3 HOH 101 2101 2101 HOH HOH A . C 3 HOH 102 2102 2102 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-12-26 2 'Structure model' 1 1 2013-01-30 3 'Structure model' 1 2 2015-03-25 4 'Structure model' 1 3 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_sf' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -23.8634 _pdbx_refine_tls.origin_y 0.5096 _pdbx_refine_tls.origin_z -11.3348 _pdbx_refine_tls.T[1][1] 0.0313 _pdbx_refine_tls.T[2][2] 0.0377 _pdbx_refine_tls.T[3][3] 0.0412 _pdbx_refine_tls.T[1][2] -0.0177 _pdbx_refine_tls.T[1][3] -0.0270 _pdbx_refine_tls.T[2][3] 0.0058 _pdbx_refine_tls.L[1][1] 1.0915 _pdbx_refine_tls.L[2][2] 0.6379 _pdbx_refine_tls.L[3][3] 1.6008 _pdbx_refine_tls.L[1][2] -0.0051 _pdbx_refine_tls.L[1][3] 0.8551 _pdbx_refine_tls.L[2][3] 0.0110 _pdbx_refine_tls.S[1][1] -0.0677 _pdbx_refine_tls.S[1][2] 0.0878 _pdbx_refine_tls.S[1][3] 0.0723 _pdbx_refine_tls.S[2][1] 0.0500 _pdbx_refine_tls.S[2][2] 0.0133 _pdbx_refine_tls.S[2][3] -0.0510 _pdbx_refine_tls.S[3][1] -0.0858 _pdbx_refine_tls.S[3][2] 0.1949 _pdbx_refine_tls.S[3][3] 0.0544 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 136 ? ? A 210 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 A 211 ? ? A 267 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.6.0117 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_entry_details.entry_id 4AGJ _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'SOME RESIDUES ARE FOUND TO BE DIFFERENT IN OUR DATA' _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 2015 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2040 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 150 ? ? -90.91 59.36 2 1 ALA A 180 ? ? -30.50 140.75 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 110 ? A ALA 1 2 1 Y 1 A LEU 111 ? A LEU 2 3 1 Y 1 A LYS 112 ? A LYS 3 4 1 Y 1 A PHE 113 ? A PHE 4 5 1 Y 1 A GLU 114 ? A GLU 5 6 1 Y 1 A ALA 115 ? A ALA 6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DIO C1 C N N 74 DIO C2 C N N 75 DIO "C1'" C N N 76 DIO "C2'" C N N 77 DIO O1 O N N 78 DIO "O1'" O N N 79 DIO H11 H N N 80 DIO H12 H N N 81 DIO H21 H N N 82 DIO H22 H N N 83 DIO "H1'1" H N N 84 DIO "H1'2" H N N 85 DIO "H2'1" H N N 86 DIO "H2'2" H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DIO C1 "C1'" sing N N 70 DIO C1 O1 sing N N 71 DIO C1 H11 sing N N 72 DIO C1 H12 sing N N 73 DIO C2 "C2'" sing N N 74 DIO C2 O1 sing N N 75 DIO C2 H21 sing N N 76 DIO C2 H22 sing N N 77 DIO "C1'" "O1'" sing N N 78 DIO "C1'" "H1'1" sing N N 79 DIO "C1'" "H1'2" sing N N 80 DIO "C2'" "O1'" sing N N 81 DIO "C2'" "H2'1" sing N N 82 DIO "C2'" "H2'2" sing N N 83 GLN N CA sing N N 84 GLN N H sing N N 85 GLN N H2 sing N N 86 GLN CA C sing N N 87 GLN CA CB sing N N 88 GLN CA HA sing N N 89 GLN C O doub N N 90 GLN C OXT sing N N 91 GLN CB CG sing N N 92 GLN CB HB2 sing N N 93 GLN CB HB3 sing N N 94 GLN CG CD sing N N 95 GLN CG HG2 sing N N 96 GLN CG HG3 sing N N 97 GLN CD OE1 doub N N 98 GLN CD NE2 sing N N 99 GLN NE2 HE21 sing N N 100 GLN NE2 HE22 sing N N 101 GLN OXT HXT sing N N 102 GLU N CA sing N N 103 GLU N H sing N N 104 GLU N H2 sing N N 105 GLU CA C sing N N 106 GLU CA CB sing N N 107 GLU CA HA sing N N 108 GLU C O doub N N 109 GLU C OXT sing N N 110 GLU CB CG sing N N 111 GLU CB HB2 sing N N 112 GLU CB HB3 sing N N 113 GLU CG CD sing N N 114 GLU CG HG2 sing N N 115 GLU CG HG3 sing N N 116 GLU CD OE1 doub N N 117 GLU CD OE2 sing N N 118 GLU OE2 HE2 sing N N 119 GLU OXT HXT sing N N 120 GLY N CA sing N N 121 GLY N H sing N N 122 GLY N H2 sing N N 123 GLY CA C sing N N 124 GLY CA HA2 sing N N 125 GLY CA HA3 sing N N 126 GLY C O doub N N 127 GLY C OXT sing N N 128 GLY OXT HXT sing N N 129 HIS N CA sing N N 130 HIS N H sing N N 131 HIS N H2 sing N N 132 HIS CA C sing N N 133 HIS CA CB sing N N 134 HIS CA HA sing N N 135 HIS C O doub N N 136 HIS C OXT sing N N 137 HIS CB CG sing N N 138 HIS CB HB2 sing N N 139 HIS CB HB3 sing N N 140 HIS CG ND1 sing Y N 141 HIS CG CD2 doub Y N 142 HIS ND1 CE1 doub Y N 143 HIS ND1 HD1 sing N N 144 HIS CD2 NE2 sing Y N 145 HIS CD2 HD2 sing N N 146 HIS CE1 NE2 sing Y N 147 HIS CE1 HE1 sing N N 148 HIS NE2 HE2 sing N N 149 HIS OXT HXT sing N N 150 HOH O H1 sing N N 151 HOH O H2 sing N N 152 ILE N CA sing N N 153 ILE N H sing N N 154 ILE N H2 sing N N 155 ILE CA C sing N N 156 ILE CA CB sing N N 157 ILE CA HA sing N N 158 ILE C O doub N N 159 ILE C OXT sing N N 160 ILE CB CG1 sing N N 161 ILE CB CG2 sing N N 162 ILE CB HB sing N N 163 ILE CG1 CD1 sing N N 164 ILE CG1 HG12 sing N N 165 ILE CG1 HG13 sing N N 166 ILE CG2 HG21 sing N N 167 ILE CG2 HG22 sing N N 168 ILE CG2 HG23 sing N N 169 ILE CD1 HD11 sing N N 170 ILE CD1 HD12 sing N N 171 ILE CD1 HD13 sing N N 172 ILE OXT HXT sing N N 173 LEU N CA sing N N 174 LEU N H sing N N 175 LEU N H2 sing N N 176 LEU CA C sing N N 177 LEU CA CB sing N N 178 LEU CA HA sing N N 179 LEU C O doub N N 180 LEU C OXT sing N N 181 LEU CB CG sing N N 182 LEU CB HB2 sing N N 183 LEU CB HB3 sing N N 184 LEU CG CD1 sing N N 185 LEU CG CD2 sing N N 186 LEU CG HG sing N N 187 LEU CD1 HD11 sing N N 188 LEU CD1 HD12 sing N N 189 LEU CD1 HD13 sing N N 190 LEU CD2 HD21 sing N N 191 LEU CD2 HD22 sing N N 192 LEU CD2 HD23 sing N N 193 LEU OXT HXT sing N N 194 LYS N CA sing N N 195 LYS N H sing N N 196 LYS N H2 sing N N 197 LYS CA C sing N N 198 LYS CA CB sing N N 199 LYS CA HA sing N N 200 LYS C O doub N N 201 LYS C OXT sing N N 202 LYS CB CG sing N N 203 LYS CB HB2 sing N N 204 LYS CB HB3 sing N N 205 LYS CG CD sing N N 206 LYS CG HG2 sing N N 207 LYS CG HG3 sing N N 208 LYS CD CE sing N N 209 LYS CD HD2 sing N N 210 LYS CD HD3 sing N N 211 LYS CE NZ sing N N 212 LYS CE HE2 sing N N 213 LYS CE HE3 sing N N 214 LYS NZ HZ1 sing N N 215 LYS NZ HZ2 sing N N 216 LYS NZ HZ3 sing N N 217 LYS OXT HXT sing N N 218 MET N CA sing N N 219 MET N H sing N N 220 MET N H2 sing N N 221 MET CA C sing N N 222 MET CA CB sing N N 223 MET CA HA sing N N 224 MET C O doub N N 225 MET C OXT sing N N 226 MET CB CG sing N N 227 MET CB HB2 sing N N 228 MET CB HB3 sing N N 229 MET CG SD sing N N 230 MET CG HG2 sing N N 231 MET CG HG3 sing N N 232 MET SD CE sing N N 233 MET CE HE1 sing N N 234 MET CE HE2 sing N N 235 MET CE HE3 sing N N 236 MET OXT HXT sing N N 237 PHE N CA sing N N 238 PHE N H sing N N 239 PHE N H2 sing N N 240 PHE CA C sing N N 241 PHE CA CB sing N N 242 PHE CA HA sing N N 243 PHE C O doub N N 244 PHE C OXT sing N N 245 PHE CB CG sing N N 246 PHE CB HB2 sing N N 247 PHE CB HB3 sing N N 248 PHE CG CD1 doub Y N 249 PHE CG CD2 sing Y N 250 PHE CD1 CE1 sing Y N 251 PHE CD1 HD1 sing N N 252 PHE CD2 CE2 doub Y N 253 PHE CD2 HD2 sing N N 254 PHE CE1 CZ doub Y N 255 PHE CE1 HE1 sing N N 256 PHE CE2 CZ sing Y N 257 PHE CE2 HE2 sing N N 258 PHE CZ HZ sing N N 259 PHE OXT HXT sing N N 260 PRO N CA sing N N 261 PRO N CD sing N N 262 PRO N H sing N N 263 PRO CA C sing N N 264 PRO CA CB sing N N 265 PRO CA HA sing N N 266 PRO C O doub N N 267 PRO C OXT sing N N 268 PRO CB CG sing N N 269 PRO CB HB2 sing N N 270 PRO CB HB3 sing N N 271 PRO CG CD sing N N 272 PRO CG HG2 sing N N 273 PRO CG HG3 sing N N 274 PRO CD HD2 sing N N 275 PRO CD HD3 sing N N 276 PRO OXT HXT sing N N 277 SER N CA sing N N 278 SER N H sing N N 279 SER N H2 sing N N 280 SER CA C sing N N 281 SER CA CB sing N N 282 SER CA HA sing N N 283 SER C O doub N N 284 SER C OXT sing N N 285 SER CB OG sing N N 286 SER CB HB2 sing N N 287 SER CB HB3 sing N N 288 SER OG HG sing N N 289 SER OXT HXT sing N N 290 THR N CA sing N N 291 THR N H sing N N 292 THR N H2 sing N N 293 THR CA C sing N N 294 THR CA CB sing N N 295 THR CA HA sing N N 296 THR C O doub N N 297 THR C OXT sing N N 298 THR CB OG1 sing N N 299 THR CB CG2 sing N N 300 THR CB HB sing N N 301 THR OG1 HG1 sing N N 302 THR CG2 HG21 sing N N 303 THR CG2 HG22 sing N N 304 THR CG2 HG23 sing N N 305 THR OXT HXT sing N N 306 TRP N CA sing N N 307 TRP N H sing N N 308 TRP N H2 sing N N 309 TRP CA C sing N N 310 TRP CA CB sing N N 311 TRP CA HA sing N N 312 TRP C O doub N N 313 TRP C OXT sing N N 314 TRP CB CG sing N N 315 TRP CB HB2 sing N N 316 TRP CB HB3 sing N N 317 TRP CG CD1 doub Y N 318 TRP CG CD2 sing Y N 319 TRP CD1 NE1 sing Y N 320 TRP CD1 HD1 sing N N 321 TRP CD2 CE2 doub Y N 322 TRP CD2 CE3 sing Y N 323 TRP NE1 CE2 sing Y N 324 TRP NE1 HE1 sing N N 325 TRP CE2 CZ2 sing Y N 326 TRP CE3 CZ3 doub Y N 327 TRP CE3 HE3 sing N N 328 TRP CZ2 CH2 doub Y N 329 TRP CZ2 HZ2 sing N N 330 TRP CZ3 CH2 sing Y N 331 TRP CZ3 HZ3 sing N N 332 TRP CH2 HH2 sing N N 333 TRP OXT HXT sing N N 334 TYR N CA sing N N 335 TYR N H sing N N 336 TYR N H2 sing N N 337 TYR CA C sing N N 338 TYR CA CB sing N N 339 TYR CA HA sing N N 340 TYR C O doub N N 341 TYR C OXT sing N N 342 TYR CB CG sing N N 343 TYR CB HB2 sing N N 344 TYR CB HB3 sing N N 345 TYR CG CD1 doub Y N 346 TYR CG CD2 sing Y N 347 TYR CD1 CE1 sing Y N 348 TYR CD1 HD1 sing N N 349 TYR CD2 CE2 doub Y N 350 TYR CD2 HD2 sing N N 351 TYR CE1 CZ doub Y N 352 TYR CE1 HE1 sing N N 353 TYR CE2 CZ sing Y N 354 TYR CE2 HE2 sing N N 355 TYR CZ OH sing N N 356 TYR OH HH sing N N 357 TYR OXT HXT sing N N 358 VAL N CA sing N N 359 VAL N H sing N N 360 VAL N H2 sing N N 361 VAL CA C sing N N 362 VAL CA CB sing N N 363 VAL CA HA sing N N 364 VAL C O doub N N 365 VAL C OXT sing N N 366 VAL CB CG1 sing N N 367 VAL CB CG2 sing N N 368 VAL CB HB sing N N 369 VAL CG1 HG11 sing N N 370 VAL CG1 HG12 sing N N 371 VAL CG1 HG13 sing N N 372 VAL CG2 HG21 sing N N 373 VAL CG2 HG22 sing N N 374 VAL CG2 HG23 sing N N 375 VAL OXT HXT sing N N 376 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '1,4-DIETHYLENE DIOXIDE' DIO 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1KXA _pdbx_initial_refinement_model.details 'PDB ENTRY 1KXA' #