HEADER IMMUNE SYSTEM 15-FEB-12 4AIX TITLE CRYSTALLOGRAPHIC STRUCTURE OF AN AMYLOIDOGENIC VARIANT, 3RC34Y, OF THE TITLE 2 GERMINAL LINE LAMBDA 3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: IG LAMBDA CHAIN V-IV REGION BAU; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: 3RC34Y; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET22B KEYWDS IMMUNE SYSTEM, AMYLOIDOSIS EXPDTA X-RAY DIFFRACTION AUTHOR M.I.VILLALBA,O.D.LUNA,E.RUDINO-PINERA,R.SANCHEZ,R.SANCHEZ-LOPEZ, AUTHOR 2 S.ROJAS-TREJO,T.OLAMENDI-PORTUGAL,D.A.FERNANDEZ-VELASCO,B.BECERRIL REVDAT 4 20-DEC-23 4AIX 1 REMARK REVDAT 3 11-FEB-15 4AIX 1 JRNL REVDAT 2 14-JAN-15 4AIX 1 JRNL REVDAT 1 27-FEB-13 4AIX 0 JRNL AUTH M.I.VILLALBA,J.C.CANUL-TEC,O.D.LUNA-MARTINEZ, JRNL AUTH 2 R.SANCHEZ-ALCALA,T.OLAMENDI-PORTUGAL,E.RUDINO-PINERA, JRNL AUTH 3 S.ROJAS,R.SANCHEZ-LOPEZ,D.A.FERNANDEZ-VELASCO,B.BECERRIL JRNL TITL SITE-DIRECTED MUTAGENESIS REVEALS REGIONS IMPLICATED IN THE JRNL TITL 2 STABILITY AND FIBER FORMATION OF HUMAN LAMBDA3R LIGHT JRNL TITL 3 CHAINS. JRNL REF J.BIOL.CHEM. V. 290 2577 2015 JRNL REFN ISSN 0021-9258 JRNL PMID 25505244 JRNL DOI 10.1074/JBC.M114.629550 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.850 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 31070 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1565 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.8710 - 3.9983 1.00 2679 143 0.1633 0.1760 REMARK 3 2 3.9983 - 3.1757 1.00 2670 144 0.1571 0.2073 REMARK 3 3 3.1757 - 2.7748 1.00 2650 160 0.1663 0.2149 REMARK 3 4 2.7748 - 2.5214 1.00 2715 139 0.1669 0.2359 REMARK 3 5 2.5214 - 2.3408 1.00 2653 140 0.1759 0.2228 REMARK 3 6 2.3408 - 2.2029 1.00 2679 122 0.1672 0.2436 REMARK 3 7 2.2029 - 2.0926 1.00 2679 141 0.1690 0.2567 REMARK 3 8 2.0926 - 2.0016 1.00 2696 156 0.1691 0.2605 REMARK 3 9 2.0016 - 1.9246 1.00 2708 139 0.1750 0.2306 REMARK 3 10 1.9246 - 1.8582 1.00 2710 135 0.1878 0.2729 REMARK 3 11 1.8582 - 1.8001 1.00 2666 146 0.2095 0.2929 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.61 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 45.56 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.480 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.27 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.20950 REMARK 3 B22 (A**2) : 0.20950 REMARK 3 B33 (A**2) : -0.41890 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3447 REMARK 3 ANGLE : 1.133 4728 REMARK 3 CHIRALITY : 0.086 519 REMARK 3 PLANARITY : 0.005 626 REMARK 3 DIHEDRAL : 13.085 1238 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4AIX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1290051292. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAY-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9720 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : DOUBLE CRYSTAL CHANNEL CUT, REMARK 200 SI(111), 1M LONG RH COATED REMARK 200 TOROIDAL MIRROR FOR VERTICAL AND REMARK 200 HORIZONTAL FOCUSING REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31131 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 27.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.32000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1LIL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.3 M AMMONIUM SULFATE, 40 % REMARK 280 TREHALOSE, PH 3 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.93567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 113.87133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 SER B 1 REMARK 465 SER C 1 REMARK 465 SER D 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2068 O HOH A 2070 1.55 REMARK 500 O HOH B 2014 O HOH B 2032 1.91 REMARK 500 O HOH B 2006 O HOH C 2020 1.93 REMARK 500 O HOH A 2067 O HOH A 2068 1.94 REMARK 500 O HOH A 2046 O HOH A 2048 2.02 REMARK 500 OE1 GLN A 49 O HOH A 2061 2.07 REMARK 500 NH1 ARG B 53 O HOH B 2060 2.08 REMARK 500 OE1 GLN A 49 O HOH A 2062 2.08 REMARK 500 O HOH B 2073 O HOH B 2075 2.11 REMARK 500 O HOH B 2021 O HOH B 2022 2.12 REMARK 500 O HOH B 2026 O HOH B 2048 2.13 REMARK 500 O HOH B 2018 O HOH B 2021 2.14 REMARK 500 O HOH D 2031 O HOH D 2083 2.15 REMARK 500 O HOH C 2036 O HOH C 2069 2.16 REMARK 500 O HOH A 2021 O HOH A 2055 2.16 REMARK 500 OH TYR B 33 O HOH B 2043 2.17 REMARK 500 O HOH A 2024 O HOH A 2026 2.17 REMARK 500 O HOH B 2076 O HOH C 2054 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH C 2072 O HOH D 2058 2655 1.93 REMARK 500 NH1 ARG B 60 OE1 GLU C 59 1445 2.05 REMARK 500 O HOH C 2021 O HOH D 2031 2655 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 50 -53.79 74.38 REMARK 500 ASP B 50 -51.12 78.89 REMARK 500 SER B 51 -3.03 -143.20 REMARK 500 SER B 92 -83.62 -49.45 REMARK 500 ASP C 50 -48.46 77.56 REMARK 500 ASP D 50 -48.55 75.52 REMARK 500 SER D 92 101.28 170.04 REMARK 500 THR D 94 -94.68 -87.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY B 24 ASP B 25 134.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D2026 DISTANCE = 7.03 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4AIZ RELATED DB: PDB REMARK 900 CRYSTALLOGRAPHIC STRUCTURE OF 3MJL2 FROM THE GERMINAL LINE LAMBDA 3 REMARK 900 RELATED ID: 4AJ0 RELATED DB: PDB REMARK 900 CRYSTALLOGRAPHIC STRUCTURE OF AN AMYLOIDOGENIC VARIANT, 3RCW, OF REMARK 900 THE GERMINAL LINE LAMBDA 3 REMARK 999 REMARK 999 SEQUENCE REMARK 999 BECAUSE THIS VARIANT IS RESULT OF MODIFICATIONS OVER 3RJL2 REMARK 999 IT IS NOT DEPOSITED IN ANY DATA BASE. REMARK 999 CLOSEST UNIPROT MATCH P01715. REMARK 999 MUTATION C34Y. DBREF 4AIX A 1 107 PDB 4AIX 4AIX 1 107 DBREF 4AIX B 1 107 PDB 4AIX 4AIX 1 107 DBREF 4AIX C 1 107 PDB 4AIX 4AIX 1 107 DBREF 4AIX D 1 107 PDB 4AIX 4AIX 1 107 SEQRES 1 A 107 SER TYR GLU LEU THR GLN PRO PRO SER VAL SER VAL SER SEQRES 2 A 107 PRO GLY GLN THR ALA SER ILE THR CYS SER GLY ASP LYS SEQRES 3 A 107 LEU GLY ASP LYS TYR ALA TYR TRP TYR GLN GLN LYS PRO SEQRES 4 A 107 GLY GLN SER PRO VAL LEU VAL ILE TYR GLN ASP SER LYS SEQRES 5 A 107 ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SER ASN SEQRES 6 A 107 SER GLY ASN THR ALA THR LEU THR ILE SER GLY THR GLN SEQRES 7 A 107 ALA MET ASP GLU ALA ASP TYR TYR CYS GLN ALA TRP ASP SEQRES 8 A 107 SER SER THR ALA VAL VAL PHE GLY GLY GLY THR LYS LEU SEQRES 9 A 107 THR VAL LEU SEQRES 1 B 107 SER TYR GLU LEU THR GLN PRO PRO SER VAL SER VAL SER SEQRES 2 B 107 PRO GLY GLN THR ALA SER ILE THR CYS SER GLY ASP LYS SEQRES 3 B 107 LEU GLY ASP LYS TYR ALA TYR TRP TYR GLN GLN LYS PRO SEQRES 4 B 107 GLY GLN SER PRO VAL LEU VAL ILE TYR GLN ASP SER LYS SEQRES 5 B 107 ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SER ASN SEQRES 6 B 107 SER GLY ASN THR ALA THR LEU THR ILE SER GLY THR GLN SEQRES 7 B 107 ALA MET ASP GLU ALA ASP TYR TYR CYS GLN ALA TRP ASP SEQRES 8 B 107 SER SER THR ALA VAL VAL PHE GLY GLY GLY THR LYS LEU SEQRES 9 B 107 THR VAL LEU SEQRES 1 C 107 SER TYR GLU LEU THR GLN PRO PRO SER VAL SER VAL SER SEQRES 2 C 107 PRO GLY GLN THR ALA SER ILE THR CYS SER GLY ASP LYS SEQRES 3 C 107 LEU GLY ASP LYS TYR ALA TYR TRP TYR GLN GLN LYS PRO SEQRES 4 C 107 GLY GLN SER PRO VAL LEU VAL ILE TYR GLN ASP SER LYS SEQRES 5 C 107 ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SER ASN SEQRES 6 C 107 SER GLY ASN THR ALA THR LEU THR ILE SER GLY THR GLN SEQRES 7 C 107 ALA MET ASP GLU ALA ASP TYR TYR CYS GLN ALA TRP ASP SEQRES 8 C 107 SER SER THR ALA VAL VAL PHE GLY GLY GLY THR LYS LEU SEQRES 9 C 107 THR VAL LEU SEQRES 1 D 107 SER TYR GLU LEU THR GLN PRO PRO SER VAL SER VAL SER SEQRES 2 D 107 PRO GLY GLN THR ALA SER ILE THR CYS SER GLY ASP LYS SEQRES 3 D 107 LEU GLY ASP LYS TYR ALA TYR TRP TYR GLN GLN LYS PRO SEQRES 4 D 107 GLY GLN SER PRO VAL LEU VAL ILE TYR GLN ASP SER LYS SEQRES 5 D 107 ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SER ASN SEQRES 6 D 107 SER GLY ASN THR ALA THR LEU THR ILE SER GLY THR GLN SEQRES 7 D 107 ALA MET ASP GLU ALA ASP TYR TYR CYS GLN ALA TRP ASP SEQRES 8 D 107 SER SER THR ALA VAL VAL PHE GLY GLY GLY THR LYS LEU SEQRES 9 D 107 THR VAL LEU FORMUL 5 HOH *356(H2 O) HELIX 1 1 LYS A 26 LYS A 30 5 5 HELIX 2 2 GLN A 78 GLU A 82 5 5 HELIX 3 3 LYS B 26 LYS B 30 5 5 HELIX 4 4 GLN B 78 GLU B 82 5 5 HELIX 5 5 LYS C 26 LYS C 30 5 5 HELIX 6 6 GLN C 78 GLU C 82 5 5 HELIX 7 7 LYS D 26 LYS D 30 5 5 HELIX 8 8 GLN D 78 GLU D 82 5 5 SHEET 1 AA 4 SER A 9 VAL A 12 0 SHEET 2 AA 4 THR A 102 VAL A 106 1 O LYS A 103 N VAL A 10 SHEET 3 AA 4 ALA A 83 TRP A 90 -1 O ALA A 83 N LEU A 104 SHEET 4 AA 4 VAL A 97 PHE A 98 1 O VAL A 97 N ALA A 89 SHEET 1 AB 5 SER A 9 VAL A 12 0 SHEET 2 AB 5 THR A 102 VAL A 106 1 O LYS A 103 N VAL A 10 SHEET 3 AB 5 ALA A 83 TRP A 90 -1 O ALA A 83 N LEU A 104 SHEET 4 AB 5 TYR A 31 GLN A 37 -1 O TYR A 31 N TRP A 90 SHEET 5 AB 5 VAL A 44 ILE A 47 -1 O VAL A 44 N GLN A 36 SHEET 1 AC 2 VAL A 97 PHE A 98 0 SHEET 2 AC 2 ALA A 83 TRP A 90 1 O ALA A 89 N VAL A 97 SHEET 1 AD 3 ALA A 18 SER A 23 0 SHEET 2 AD 3 THR A 69 ILE A 74 -1 O ALA A 70 N CYS A 22 SHEET 3 AD 3 PHE A 61 SER A 66 -1 O SER A 62 N THR A 73 SHEET 1 BA 4 SER B 9 VAL B 12 0 SHEET 2 BA 4 THR B 102 VAL B 106 1 O LYS B 103 N VAL B 10 SHEET 3 BA 4 ALA B 83 TRP B 90 -1 O ALA B 83 N LEU B 104 SHEET 4 BA 4 VAL B 97 PHE B 98 1 O VAL B 97 N ALA B 89 SHEET 1 BB 5 SER B 9 VAL B 12 0 SHEET 2 BB 5 THR B 102 VAL B 106 1 O LYS B 103 N VAL B 10 SHEET 3 BB 5 ALA B 83 TRP B 90 -1 O ALA B 83 N LEU B 104 SHEET 4 BB 5 TYR B 31 GLN B 37 -1 O TYR B 31 N TRP B 90 SHEET 5 BB 5 VAL B 44 ILE B 47 -1 O VAL B 44 N GLN B 36 SHEET 1 BC 2 VAL B 97 PHE B 98 0 SHEET 2 BC 2 ALA B 83 TRP B 90 1 O ALA B 89 N VAL B 97 SHEET 1 BD 3 ALA B 18 SER B 23 0 SHEET 2 BD 3 THR B 69 ILE B 74 -1 O ALA B 70 N CYS B 22 SHEET 3 BD 3 PHE B 61 SER B 66 -1 O SER B 62 N THR B 73 SHEET 1 CA 4 SER C 9 VAL C 12 0 SHEET 2 CA 4 THR C 102 VAL C 106 1 O LYS C 103 N VAL C 10 SHEET 3 CA 4 ALA C 83 TRP C 90 -1 O ALA C 83 N LEU C 104 SHEET 4 CA 4 VAL C 97 PHE C 98 1 O VAL C 97 N ALA C 89 SHEET 1 CB 5 SER C 9 VAL C 12 0 SHEET 2 CB 5 THR C 102 VAL C 106 1 O LYS C 103 N VAL C 10 SHEET 3 CB 5 ALA C 83 TRP C 90 -1 O ALA C 83 N LEU C 104 SHEET 4 CB 5 TYR C 31 GLN C 37 -1 O TYR C 31 N TRP C 90 SHEET 5 CB 5 VAL C 44 ILE C 47 -1 O VAL C 44 N GLN C 36 SHEET 1 CC 2 VAL C 97 PHE C 98 0 SHEET 2 CC 2 ALA C 83 TRP C 90 1 O ALA C 89 N VAL C 97 SHEET 1 CD 3 ALA C 18 SER C 23 0 SHEET 2 CD 3 THR C 69 ILE C 74 -1 O ALA C 70 N CYS C 22 SHEET 3 CD 3 PHE C 61 SER C 66 -1 O SER C 62 N THR C 73 SHEET 1 DA 4 SER D 9 VAL D 12 0 SHEET 2 DA 4 THR D 102 VAL D 106 1 O LYS D 103 N VAL D 10 SHEET 3 DA 4 ALA D 83 TRP D 90 -1 O ALA D 83 N LEU D 104 SHEET 4 DA 4 VAL D 97 PHE D 98 1 O VAL D 97 N ALA D 89 SHEET 1 DB 5 SER D 9 VAL D 12 0 SHEET 2 DB 5 THR D 102 VAL D 106 1 O LYS D 103 N VAL D 10 SHEET 3 DB 5 ALA D 83 TRP D 90 -1 O ALA D 83 N LEU D 104 SHEET 4 DB 5 TYR D 31 GLN D 37 -1 O TYR D 31 N TRP D 90 SHEET 5 DB 5 VAL D 44 ILE D 47 -1 O VAL D 44 N GLN D 36 SHEET 1 DC 2 VAL D 97 PHE D 98 0 SHEET 2 DC 2 ALA D 83 TRP D 90 1 O ALA D 89 N VAL D 97 SHEET 1 DD 3 ALA D 18 SER D 23 0 SHEET 2 DD 3 THR D 69 ILE D 74 -1 O ALA D 70 N CYS D 22 SHEET 3 DD 3 PHE D 61 SER D 66 -1 O SER D 62 N THR D 73 SSBOND 1 CYS A 22 CYS A 87 1555 1555 2.04 SSBOND 2 CYS B 22 CYS B 87 1555 1555 2.04 SSBOND 3 CYS C 22 CYS C 87 1555 1555 2.06 SSBOND 4 CYS D 22 CYS D 87 1555 1555 2.04 CISPEP 1 SER D 92 SER D 93 0 -8.05 CISPEP 2 SER D 93 THR D 94 0 4.83 CISPEP 3 THR D 94 ALA D 95 0 -2.15 CRYST1 41.884 41.884 170.807 90.00 90.00 120.00 P 31 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023875 0.013785 0.000000 0.00000 SCALE2 0.000000 0.027569 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005855 0.00000