data_4AL5 # _entry.id 4AL5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4AL5 pdb_00004al5 10.2210/pdb4al5/pdb PDBE EBI-51512 ? ? WWPDB D_1290051512 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4AL6 unspecified 'CRYSTAL STRUCTURE OF THE S148ACSY4-CRRNA COMPLEX' PDB 4AL7 unspecified 'CRYSTAL STRUCTURE OF THE CSY4-MINIMAL CRRNA COMPLEX' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4AL5 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-03-02 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Haurwitz, R.E.' 1 'Sternberg, S.H.' 2 'Doudna, J.A.' 3 # _citation.id primary _citation.title 'Csy4 Relies on an Unusual Catalytic Dyad to Position and Cleave Crispr RNA.' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 31 _citation.page_first 2824 _citation.page_last ? _citation.year 2012 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22522703 _citation.pdbx_database_id_DOI 10.1038/EMBOJ.2012.107 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Haurwitz, R.E.' 1 ? primary 'Sternberg, S.H.' 2 ? primary 'Doudna, J.A.' 3 ? # _cell.entry_id 4AL5 _cell.length_a 60.790 _cell.length_b 47.800 _cell.length_c 86.570 _cell.angle_alpha 90.00 _cell.angle_beta 109.69 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AL5 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CSY4 ENDORIBONUCLEASE' 21835.977 1 ? YES ? ? 2 polymer syn ;5'-R(*UP*UP*CP*AP*CP*UP*GP*CP*CP*GP*UP*AP*UP*AP *GP*GP*CP*AP*GP*C)-3' ; 6359.815 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 128 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name CRRNA # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSFTMDHYLDIRLRPDPEFPPAQLMCVLFGKLHQALVAQGGDRIGVSFPDLDESRSRLGERLRIHASADDLRALLARPWL EGLRDHLQFGEPAVVPHPTPYRQVSRVQAKSNPERLRRRLMRRHDLSEEEARKRIPDTVARALDLPFVTLRSQSTGQHFR LFIRHGPLQVTAEEGGFTCYGLSKGGFVPWF ; ;GSFTMDHYLDIRLRPDPEFPPAQLMCVLFGKLHQALVAQGGDRIGVSFPDLDESRSRLGERLRIHASADDLRALLARPWL EGLRDHLQFGEPAVVPHPTPYRQVSRVQAKSNPERLRRRLMRRHDLSEEEARKRIPDTVARALDLPFVTLRSQSTGQHFR LFIRHGPLQVTAEEGGFTCYGLSKGGFVPWF ; A ? 2 polyribonucleotide no no UUCACUGCCGUAUAGGCAGC UUCACUGCCGUAUAGGCAGC B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 PHE n 1 4 THR n 1 5 MET n 1 6 ASP n 1 7 HIS n 1 8 TYR n 1 9 LEU n 1 10 ASP n 1 11 ILE n 1 12 ARG n 1 13 LEU n 1 14 ARG n 1 15 PRO n 1 16 ASP n 1 17 PRO n 1 18 GLU n 1 19 PHE n 1 20 PRO n 1 21 PRO n 1 22 ALA n 1 23 GLN n 1 24 LEU n 1 25 MET n 1 26 CYS n 1 27 VAL n 1 28 LEU n 1 29 PHE n 1 30 GLY n 1 31 LYS n 1 32 LEU n 1 33 HIS n 1 34 GLN n 1 35 ALA n 1 36 LEU n 1 37 VAL n 1 38 ALA n 1 39 GLN n 1 40 GLY n 1 41 GLY n 1 42 ASP n 1 43 ARG n 1 44 ILE n 1 45 GLY n 1 46 VAL n 1 47 SER n 1 48 PHE n 1 49 PRO n 1 50 ASP n 1 51 LEU n 1 52 ASP n 1 53 GLU n 1 54 SER n 1 55 ARG n 1 56 SER n 1 57 ARG n 1 58 LEU n 1 59 GLY n 1 60 GLU n 1 61 ARG n 1 62 LEU n 1 63 ARG n 1 64 ILE n 1 65 HIS n 1 66 ALA n 1 67 SER n 1 68 ALA n 1 69 ASP n 1 70 ASP n 1 71 LEU n 1 72 ARG n 1 73 ALA n 1 74 LEU n 1 75 LEU n 1 76 ALA n 1 77 ARG n 1 78 PRO n 1 79 TRP n 1 80 LEU n 1 81 GLU n 1 82 GLY n 1 83 LEU n 1 84 ARG n 1 85 ASP n 1 86 HIS n 1 87 LEU n 1 88 GLN n 1 89 PHE n 1 90 GLY n 1 91 GLU n 1 92 PRO n 1 93 ALA n 1 94 VAL n 1 95 VAL n 1 96 PRO n 1 97 HIS n 1 98 PRO n 1 99 THR n 1 100 PRO n 1 101 TYR n 1 102 ARG n 1 103 GLN n 1 104 VAL n 1 105 SER n 1 106 ARG n 1 107 VAL n 1 108 GLN n 1 109 ALA n 1 110 LYS n 1 111 SER n 1 112 ASN n 1 113 PRO n 1 114 GLU n 1 115 ARG n 1 116 LEU n 1 117 ARG n 1 118 ARG n 1 119 ARG n 1 120 LEU n 1 121 MET n 1 122 ARG n 1 123 ARG n 1 124 HIS n 1 125 ASP n 1 126 LEU n 1 127 SER n 1 128 GLU n 1 129 GLU n 1 130 GLU n 1 131 ALA n 1 132 ARG n 1 133 LYS n 1 134 ARG n 1 135 ILE n 1 136 PRO n 1 137 ASP n 1 138 THR n 1 139 VAL n 1 140 ALA n 1 141 ARG n 1 142 ALA n 1 143 LEU n 1 144 ASP n 1 145 LEU n 1 146 PRO n 1 147 PHE n 1 148 VAL n 1 149 THR n 1 150 LEU n 1 151 ARG n 1 152 SER n 1 153 GLN n 1 154 SER n 1 155 THR n 1 156 GLY n 1 157 GLN n 1 158 HIS n 1 159 PHE n 1 160 ARG n 1 161 LEU n 1 162 PHE n 1 163 ILE n 1 164 ARG n 1 165 HIS n 1 166 GLY n 1 167 PRO n 1 168 LEU n 1 169 GLN n 1 170 VAL n 1 171 THR n 1 172 ALA n 1 173 GLU n 1 174 GLU n 1 175 GLY n 1 176 GLY n 1 177 PHE n 1 178 THR n 1 179 CYS n 1 180 TYR n 1 181 GLY n 1 182 LEU n 1 183 SER n 1 184 LYS n 1 185 GLY n 1 186 GLY n 1 187 PHE n 1 188 VAL n 1 189 PRO n 1 190 TRP n 1 191 PHE n 2 1 U n 2 2 U n 2 3 C n 2 4 A n 2 5 C n 2 6 U n 2 7 G n 2 8 C n 2 9 C n 2 10 G n 2 11 U n 2 12 A n 2 13 U n 2 14 A n 2 15 G n 2 16 G n 2 17 C n 2 18 A n 2 19 G n 2 20 C n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain UCBPP-PA14 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'PSEUDOMONAS AERUGINOSA' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant 'ROSETTA 2' _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PHMGWA _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'PSEUDOMONAS AERUGINOSA' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 287 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP Q02MM2_PSEAB 1 ? ? Q02MM2 ? 2 PDB 4AL5 2 ? ? 4AL5 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4AL5 A 25 ? 191 ? Q02MM2 1 ? 167 ? 21 187 2 2 4AL5 B 1 ? 20 ? 4AL5 2 ? 21 ? 2 21 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4AL5 GLY A 1 ? UNP Q02MM2 ? ? 'expression tag' -3 1 1 4AL5 SER A 2 ? UNP Q02MM2 ? ? 'expression tag' -2 2 1 4AL5 PHE A 3 ? UNP Q02MM2 ? ? 'expression tag' -1 3 1 4AL5 THR A 4 ? UNP Q02MM2 ? ? 'expression tag' 0 4 1 4AL5 MET A 5 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 1 5 1 4AL5 ASP A 6 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 2 6 1 4AL5 HIS A 7 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 3 7 1 4AL5 TYR A 8 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 4 8 1 4AL5 LEU A 9 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 5 9 1 4AL5 ASP A 10 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 6 10 1 4AL5 ILE A 11 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 7 11 1 4AL5 ARG A 12 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 8 12 1 4AL5 LEU A 13 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 9 13 1 4AL5 ARG A 14 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 10 14 1 4AL5 PRO A 15 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 11 15 1 4AL5 ASP A 16 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 12 16 1 4AL5 PRO A 17 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 13 17 1 4AL5 GLU A 18 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 14 18 1 4AL5 PHE A 19 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 15 19 1 4AL5 PRO A 20 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 16 20 1 4AL5 PRO A 21 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 17 21 1 4AL5 ALA A 22 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 18 22 1 4AL5 GLN A 23 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 19 23 1 4AL5 LEU A 24 ? UNP Q02MM2 ? ? 'SEE REMARK 999' 20 24 1 4AL5 CYS A 26 ? UNP Q02MM2 SER 22 'engineered mutation' 22 25 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4AL5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_percent_sol 47.17 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '22 % PEG4000, 120 MM SODIUM CITRATE PH 5.0, 50 MM MGCL2' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2010-09-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.11588 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_wavelength 1.11588 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4AL5 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 81.51 _reflns.d_resolution_high 2.00 _reflns.number_obs 15945 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.58 _reflns.B_iso_Wilson_estimate 23.89 _reflns.pdbx_redundancy 6.5 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.05 _reflns_shell.percent_possible_all 99.0 _reflns_shell.Rmerge_I_obs 0.81 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.06 _reflns_shell.pdbx_redundancy 5.2 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4AL5 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 15934 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 81.508 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 99.69 _refine.ls_R_factor_obs 0.1857 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1829 _refine.ls_R_factor_R_free 0.2382 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 797 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 33.8 _refine.aniso_B[1][1] 2.4691 _refine.aniso_B[2][2] 0.6628 _refine.aniso_B[3][3] -3.1319 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 4.8929 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.438 _refine.solvent_model_param_bsol 52.346 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.86 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2XLK' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.28 _refine.pdbx_overall_phase_error 22.45 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1455 _refine_hist.pdbx_number_atoms_nucleic_acid 348 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 128 _refine_hist.number_atoms_total 1937 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 81.508 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.012 ? ? 1891 'X-RAY DIFFRACTION' ? f_angle_d 1.328 ? ? 2649 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 13.504 ? ? 744 'X-RAY DIFFRACTION' ? f_chiral_restr 0.119 ? ? 302 'X-RAY DIFFRACTION' ? f_plane_restr 0.007 ? ? 289 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.0000 2.1253 2477 0.2088 100.00 0.2678 . . 140 . . 'X-RAY DIFFRACTION' . 2.1253 2.2894 2523 0.2023 100.00 0.2666 . . 132 . . 'X-RAY DIFFRACTION' . 2.2894 2.5198 2508 0.1902 100.00 0.2759 . . 127 . . 'X-RAY DIFFRACTION' . 2.5198 2.8845 2522 0.1813 100.00 0.2805 . . 131 . . 'X-RAY DIFFRACTION' . 2.8845 3.6342 2523 0.1600 100.00 0.2334 . . 134 . . 'X-RAY DIFFRACTION' . 3.6342 81.5754 2584 0.1849 99.00 0.2015 . . 133 . . # _struct.entry_id 4AL5 _struct.title 'Crystal structure of the Csy4-crRNA product complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4AL5 _struct_keywords.pdbx_keywords HYDROLASE/RNA _struct_keywords.text 'HYDROLASE-RNA COMPLEX, CRISPR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 20 ? GLY A 40 ? PRO A 16 GLY A 36 1 ? 21 HELX_P HELX_P2 2 SER A 67 ? ARG A 77 ? SER A 63 ARG A 73 1 ? 11 HELX_P HELX_P3 3 PRO A 78 ? GLU A 81 ? PRO A 74 GLU A 77 5 ? 4 HELX_P HELX_P4 4 LEU A 83 ? ASP A 85 ? LEU A 79 ASP A 81 5 ? 3 HELX_P HELX_P5 5 ASN A 112 ? ASP A 125 ? ASN A 108 ASP A 121 1 ? 14 HELX_P HELX_P6 6 SER A 127 ? ILE A 135 ? SER A 123 ILE A 131 1 ? 9 HELX_P HELX_P7 7 PRO A 136 ? ALA A 140 ? PRO A 132 ALA A 136 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B C 5 N3 ? ? ? 1_555 B G 19 N1 ? ? B C 6 B G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B C 5 N4 ? ? ? 1_555 B G 19 O6 ? ? B C 6 B G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B C 5 O2 ? ? ? 1_555 B G 19 N2 ? ? B C 6 B G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B U 6 N3 ? ? ? 1_555 B A 18 N1 ? ? B U 7 B A 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B U 6 O4 ? ? ? 1_555 B A 18 N6 ? ? B U 7 B A 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B G 7 N1 ? ? ? 1_555 B C 17 N3 ? ? B G 8 B C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B G 7 N2 ? ? ? 1_555 B C 17 O2 ? ? B G 8 B C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B G 7 O6 ? ? ? 1_555 B C 17 N4 ? ? B G 8 B C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B C 8 N3 ? ? ? 1_555 B G 16 N1 ? ? B C 9 B G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B C 8 N4 ? ? ? 1_555 B G 16 O6 ? ? B C 9 B G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B C 8 O2 ? ? ? 1_555 B G 16 N2 ? ? B C 9 B G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B C 9 N3 ? ? ? 1_555 B G 15 N1 ? ? B C 10 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B C 9 N4 ? ? ? 1_555 B G 15 O6 ? ? B C 10 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B C 9 O2 ? ? ? 1_555 B G 15 N2 ? ? B C 10 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B G 10 N2 ? ? ? 1_555 B A 14 N7 ? ? B G 11 B A 15 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog16 hydrog ? ? B G 10 N3 ? ? ? 1_555 B A 14 N6 ? ? B G 11 B A 15 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id HIS _struct_mon_prot_cis.label_seq_id 97 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id HIS _struct_mon_prot_cis.auth_seq_id 93 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 98 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 94 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 4.34 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? AB ? 4 ? AC ? 2 ? AD ? 2 ? AE ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AC 1 2 ? anti-parallel AD 1 2 ? anti-parallel AE 1 2 ? anti-parallel AE 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLY A 45 ? SER A 47 ? GLY A 41 SER A 43 AA 2 ARG A 61 ? ALA A 66 ? ARG A 57 ALA A 62 AA 3 HIS A 7 ? LEU A 13 ? HIS A 3 LEU A 9 AA 4 LEU A 87 ? PHE A 89 ? LEU A 83 PHE A 85 AB 1 GLY A 45 ? SER A 47 ? GLY A 41 SER A 43 AB 2 ARG A 61 ? ALA A 66 ? ARG A 57 ALA A 62 AB 3 HIS A 7 ? LEU A 13 ? HIS A 3 LEU A 9 AB 4 ALA A 93 ? VAL A 94 ? ALA A 89 VAL A 90 AC 1 LEU A 87 ? PHE A 89 ? LEU A 83 PHE A 85 AC 2 HIS A 7 ? LEU A 13 ? HIS A 3 LEU A 9 AD 1 TYR A 101 ? ARG A 102 ? TYR A 97 ARG A 98 AD 2 VAL A 188 ? PRO A 189 ? VAL A 184 PRO A 185 AE 1 VAL A 104 ? VAL A 107 ? VAL A 100 VAL A 103 AE 2 HIS A 158 ? HIS A 165 ? HIS A 154 HIS A 161 AE 3 PHE A 147 ? ARG A 151 ? PHE A 143 ARG A 147 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N SER A 47 ? N SER A 43 O ARG A 63 ? O ARG A 59 AA 2 3 N ALA A 66 ? N ALA A 62 O HIS A 7 ? O HIS A 3 AA 3 4 N ARG A 12 ? N ARG A 8 O GLN A 88 ? O GLN A 84 AB 1 2 N SER A 47 ? N SER A 43 O ARG A 63 ? O ARG A 59 AB 2 3 N ALA A 66 ? N ALA A 62 O HIS A 7 ? O HIS A 3 AB 3 4 N TYR A 8 ? N TYR A 4 O ALA A 93 ? O ALA A 89 AC 1 2 N GLN A 88 ? N GLN A 84 O ARG A 12 ? O ARG A 8 AD 1 2 N ARG A 102 ? N ARG A 98 O VAL A 188 ? O VAL A 184 AE 1 2 N VAL A 107 ? N VAL A 103 O PHE A 162 ? O PHE A 158 AE 2 3 N LEU A 161 ? N LEU A 157 O VAL A 148 ? O VAL A 144 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id GOL _struct_site.pdbx_auth_seq_id 1022 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE GOL B 1022' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 THR A 155 ? THR A 151 . ? 1_555 ? 2 AC1 4 HOH D . ? HOH A 2098 . ? 4_555 ? 3 AC1 4 A B 18 ? A B 19 . ? 1_555 ? 4 AC1 4 G B 19 ? G B 20 . ? 1_555 ? # _database_PDB_matrix.entry_id 4AL5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4AL5 _atom_sites.fract_transf_matrix[1][1] 0.016450 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005887 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020921 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012269 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -3 ? ? ? A . n A 1 2 SER 2 -2 ? ? ? A . n A 1 3 PHE 3 -1 -1 PHE PHE A . n A 1 4 THR 4 0 0 THR THR A . n A 1 5 MET 5 1 1 MET MET A . n A 1 6 ASP 6 2 2 ASP ASP A . n A 1 7 HIS 7 3 3 HIS HIS A . n A 1 8 TYR 8 4 4 TYR TYR A . n A 1 9 LEU 9 5 5 LEU LEU A . n A 1 10 ASP 10 6 6 ASP ASP A . n A 1 11 ILE 11 7 7 ILE ILE A . n A 1 12 ARG 12 8 8 ARG ARG A . n A 1 13 LEU 13 9 9 LEU LEU A . n A 1 14 ARG 14 10 10 ARG ARG A . n A 1 15 PRO 15 11 11 PRO PRO A . n A 1 16 ASP 16 12 12 ASP ASP A . n A 1 17 PRO 17 13 13 PRO PRO A . n A 1 18 GLU 18 14 14 GLU GLU A . n A 1 19 PHE 19 15 15 PHE PHE A . n A 1 20 PRO 20 16 16 PRO PRO A . n A 1 21 PRO 21 17 17 PRO PRO A . n A 1 22 ALA 22 18 18 ALA ALA A . n A 1 23 GLN 23 19 19 GLN GLN A . n A 1 24 LEU 24 20 20 LEU LEU A . n A 1 25 MET 25 21 21 MET MET A . n A 1 26 CYS 26 22 22 CYS CYS A . n A 1 27 VAL 27 23 23 VAL VAL A . n A 1 28 LEU 28 24 24 LEU LEU A . n A 1 29 PHE 29 25 25 PHE PHE A . n A 1 30 GLY 30 26 26 GLY GLY A . n A 1 31 LYS 31 27 27 LYS LYS A . n A 1 32 LEU 32 28 28 LEU LEU A . n A 1 33 HIS 33 29 29 HIS HIS A . n A 1 34 GLN 34 30 30 GLN GLN A . n A 1 35 ALA 35 31 31 ALA ALA A . n A 1 36 LEU 36 32 32 LEU LEU A . n A 1 37 VAL 37 33 33 VAL VAL A . n A 1 38 ALA 38 34 34 ALA ALA A . n A 1 39 GLN 39 35 35 GLN GLN A . n A 1 40 GLY 40 36 36 GLY GLY A . n A 1 41 GLY 41 37 37 GLY GLY A . n A 1 42 ASP 42 38 38 ASP ASP A . n A 1 43 ARG 43 39 39 ARG ARG A . n A 1 44 ILE 44 40 40 ILE ILE A . n A 1 45 GLY 45 41 41 GLY GLY A . n A 1 46 VAL 46 42 42 VAL VAL A . n A 1 47 SER 47 43 43 SER SER A . n A 1 48 PHE 48 44 44 PHE PHE A . n A 1 49 PRO 49 45 45 PRO PRO A . n A 1 50 ASP 50 46 46 ASP ASP A . n A 1 51 LEU 51 47 47 LEU LEU A . n A 1 52 ASP 52 48 48 ASP ASP A . n A 1 53 GLU 53 49 49 GLU GLU A . n A 1 54 SER 54 50 50 SER SER A . n A 1 55 ARG 55 51 51 ARG ARG A . n A 1 56 SER 56 52 52 SER SER A . n A 1 57 ARG 57 53 53 ARG ARG A . n A 1 58 LEU 58 54 54 LEU LEU A . n A 1 59 GLY 59 55 55 GLY GLY A . n A 1 60 GLU 60 56 56 GLU GLU A . n A 1 61 ARG 61 57 57 ARG ARG A . n A 1 62 LEU 62 58 58 LEU LEU A . n A 1 63 ARG 63 59 59 ARG ARG A . n A 1 64 ILE 64 60 60 ILE ILE A . n A 1 65 HIS 65 61 61 HIS HIS A . n A 1 66 ALA 66 62 62 ALA ALA A . n A 1 67 SER 67 63 63 SER SER A . n A 1 68 ALA 68 64 64 ALA ALA A . n A 1 69 ASP 69 65 65 ASP ASP A . n A 1 70 ASP 70 66 66 ASP ASP A . n A 1 71 LEU 71 67 67 LEU LEU A . n A 1 72 ARG 72 68 68 ARG ARG A . n A 1 73 ALA 73 69 69 ALA ALA A . n A 1 74 LEU 74 70 70 LEU LEU A . n A 1 75 LEU 75 71 71 LEU LEU A . n A 1 76 ALA 76 72 72 ALA ALA A . n A 1 77 ARG 77 73 73 ARG ARG A . n A 1 78 PRO 78 74 74 PRO PRO A . n A 1 79 TRP 79 75 75 TRP TRP A . n A 1 80 LEU 80 76 76 LEU LEU A . n A 1 81 GLU 81 77 77 GLU GLU A . n A 1 82 GLY 82 78 78 GLY GLY A . n A 1 83 LEU 83 79 79 LEU LEU A . n A 1 84 ARG 84 80 80 ARG ARG A . n A 1 85 ASP 85 81 81 ASP ASP A . n A 1 86 HIS 86 82 82 HIS HIS A . n A 1 87 LEU 87 83 83 LEU LEU A . n A 1 88 GLN 88 84 84 GLN GLN A . n A 1 89 PHE 89 85 85 PHE PHE A . n A 1 90 GLY 90 86 86 GLY GLY A . n A 1 91 GLU 91 87 87 GLU GLU A . n A 1 92 PRO 92 88 88 PRO PRO A . n A 1 93 ALA 93 89 89 ALA ALA A . n A 1 94 VAL 94 90 90 VAL VAL A . n A 1 95 VAL 95 91 91 VAL VAL A . n A 1 96 PRO 96 92 92 PRO PRO A . n A 1 97 HIS 97 93 93 HIS HIS A . n A 1 98 PRO 98 94 94 PRO PRO A . n A 1 99 THR 99 95 95 THR THR A . n A 1 100 PRO 100 96 96 PRO PRO A . n A 1 101 TYR 101 97 97 TYR TYR A . n A 1 102 ARG 102 98 98 ARG ARG A . n A 1 103 GLN 103 99 99 GLN GLN A . n A 1 104 VAL 104 100 100 VAL VAL A . n A 1 105 SER 105 101 101 SER SER A . n A 1 106 ARG 106 102 102 ARG ARG A . n A 1 107 VAL 107 103 103 VAL VAL A . n A 1 108 GLN 108 104 104 GLN GLN A . n A 1 109 ALA 109 105 105 ALA ALA A . n A 1 110 LYS 110 106 106 LYS LYS A . n A 1 111 SER 111 107 107 SER SER A . n A 1 112 ASN 112 108 108 ASN ASN A . n A 1 113 PRO 113 109 109 PRO PRO A . n A 1 114 GLU 114 110 110 GLU GLU A . n A 1 115 ARG 115 111 111 ARG ARG A . n A 1 116 LEU 116 112 112 LEU LEU A . n A 1 117 ARG 117 113 113 ARG ARG A . n A 1 118 ARG 118 114 114 ARG ARG A . n A 1 119 ARG 119 115 115 ARG ARG A . n A 1 120 LEU 120 116 116 LEU LEU A . n A 1 121 MET 121 117 117 MET MET A . n A 1 122 ARG 122 118 118 ARG ARG A . n A 1 123 ARG 123 119 119 ARG ARG A . n A 1 124 HIS 124 120 120 HIS HIS A . n A 1 125 ASP 125 121 121 ASP ASP A . n A 1 126 LEU 126 122 122 LEU LEU A . n A 1 127 SER 127 123 123 SER SER A . n A 1 128 GLU 128 124 124 GLU GLU A . n A 1 129 GLU 129 125 125 GLU GLU A . n A 1 130 GLU 130 126 126 GLU GLU A . n A 1 131 ALA 131 127 127 ALA ALA A . n A 1 132 ARG 132 128 128 ARG ARG A . n A 1 133 LYS 133 129 129 LYS LYS A . n A 1 134 ARG 134 130 130 ARG ARG A . n A 1 135 ILE 135 131 131 ILE ILE A . n A 1 136 PRO 136 132 132 PRO PRO A . n A 1 137 ASP 137 133 133 ASP ASP A . n A 1 138 THR 138 134 134 THR THR A . n A 1 139 VAL 139 135 135 VAL VAL A . n A 1 140 ALA 140 136 136 ALA ALA A . n A 1 141 ARG 141 137 137 ARG ARG A . n A 1 142 ALA 142 138 138 ALA ALA A . n A 1 143 LEU 143 139 139 LEU LEU A . n A 1 144 ASP 144 140 140 ASP ASP A . n A 1 145 LEU 145 141 141 LEU LEU A . n A 1 146 PRO 146 142 142 PRO PRO A . n A 1 147 PHE 147 143 143 PHE PHE A . n A 1 148 VAL 148 144 144 VAL VAL A . n A 1 149 THR 149 145 145 THR THR A . n A 1 150 LEU 150 146 146 LEU LEU A . n A 1 151 ARG 151 147 147 ARG ARG A . n A 1 152 SER 152 148 148 SER SER A . n A 1 153 GLN 153 149 149 GLN GLN A . n A 1 154 SER 154 150 150 SER SER A . n A 1 155 THR 155 151 151 THR THR A . n A 1 156 GLY 156 152 152 GLY GLY A . n A 1 157 GLN 157 153 153 GLN GLN A . n A 1 158 HIS 158 154 154 HIS HIS A . n A 1 159 PHE 159 155 155 PHE PHE A . n A 1 160 ARG 160 156 156 ARG ARG A . n A 1 161 LEU 161 157 157 LEU LEU A . n A 1 162 PHE 162 158 158 PHE PHE A . n A 1 163 ILE 163 159 159 ILE ILE A . n A 1 164 ARG 164 160 160 ARG ARG A . n A 1 165 HIS 165 161 161 HIS HIS A . n A 1 166 GLY 166 162 162 GLY GLY A . n A 1 167 PRO 167 163 163 PRO PRO A . n A 1 168 LEU 168 164 164 LEU LEU A . n A 1 169 GLN 169 165 165 GLN GLN A . n A 1 170 VAL 170 166 166 VAL VAL A . n A 1 171 THR 171 167 167 THR THR A . n A 1 172 ALA 172 168 168 ALA ALA A . n A 1 173 GLU 173 169 169 GLU GLU A . n A 1 174 GLU 174 170 170 GLU GLU A . n A 1 175 GLY 175 171 171 GLY GLY A . n A 1 176 GLY 176 172 172 GLY GLY A . n A 1 177 PHE 177 173 173 PHE PHE A . n A 1 178 THR 178 174 174 THR THR A . n A 1 179 CYS 179 175 175 CYS CYS A . n A 1 180 TYR 180 176 176 TYR TYR A . n A 1 181 GLY 181 177 177 GLY GLY A . n A 1 182 LEU 182 178 178 LEU LEU A . n A 1 183 SER 183 179 179 SER SER A . n A 1 184 LYS 184 180 180 LYS LYS A . n A 1 185 GLY 185 181 181 GLY GLY A . n A 1 186 GLY 186 182 182 GLY GLY A . n A 1 187 PHE 187 183 183 PHE PHE A . n A 1 188 VAL 188 184 184 VAL VAL A . n A 1 189 PRO 189 185 185 PRO PRO A . n A 1 190 TRP 190 186 186 TRP TRP A . n A 1 191 PHE 191 187 187 PHE PHE A . n B 2 1 U 1 2 ? ? ? B . n B 2 2 U 2 3 ? ? ? B . n B 2 3 C 3 4 4 C C B . n B 2 4 A 4 5 5 A A B . n B 2 5 C 5 6 6 C C B . n B 2 6 U 6 7 7 U U B . n B 2 7 G 7 8 8 G G B . n B 2 8 C 8 9 9 C C B . n B 2 9 C 9 10 10 C C B . n B 2 10 G 10 11 11 G G B . n B 2 11 U 11 12 12 U U B . n B 2 12 A 12 13 13 A A B . n B 2 13 U 13 14 14 U U B . n B 2 14 A 14 15 15 A A B . n B 2 15 G 15 16 16 G G B . n B 2 16 G 16 17 17 G G B . n B 2 17 C 17 18 18 C C B . n B 2 18 A 18 19 19 A A B . n B 2 19 G 19 20 20 G G B . n B 2 20 C 20 21 21 C C B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL 1 1022 1022 GOL GOL B . D 4 HOH 1 2001 2001 HOH HOH A . D 4 HOH 2 2002 2002 HOH HOH A . D 4 HOH 3 2003 2003 HOH HOH A . D 4 HOH 4 2004 2004 HOH HOH A . D 4 HOH 5 2005 2005 HOH HOH A . D 4 HOH 6 2006 2006 HOH HOH A . D 4 HOH 7 2007 2007 HOH HOH A . D 4 HOH 8 2008 2008 HOH HOH A . D 4 HOH 9 2009 2009 HOH HOH A . D 4 HOH 10 2010 2010 HOH HOH A . D 4 HOH 11 2011 2011 HOH HOH A . D 4 HOH 12 2012 2012 HOH HOH A . D 4 HOH 13 2013 2013 HOH HOH A . D 4 HOH 14 2014 2014 HOH HOH A . D 4 HOH 15 2015 2015 HOH HOH A . D 4 HOH 16 2016 2016 HOH HOH A . D 4 HOH 17 2017 2017 HOH HOH A . D 4 HOH 18 2018 2018 HOH HOH A . D 4 HOH 19 2019 2019 HOH HOH A . D 4 HOH 20 2020 2020 HOH HOH A . D 4 HOH 21 2021 2021 HOH HOH A . D 4 HOH 22 2022 2022 HOH HOH A . D 4 HOH 23 2023 2023 HOH HOH A . D 4 HOH 24 2024 2024 HOH HOH A . D 4 HOH 25 2025 2025 HOH HOH A . D 4 HOH 26 2026 2026 HOH HOH A . D 4 HOH 27 2027 2027 HOH HOH A . D 4 HOH 28 2028 2028 HOH HOH A . D 4 HOH 29 2029 2029 HOH HOH A . D 4 HOH 30 2030 2030 HOH HOH A . D 4 HOH 31 2031 2031 HOH HOH A . D 4 HOH 32 2032 2032 HOH HOH A . D 4 HOH 33 2033 2033 HOH HOH A . D 4 HOH 34 2034 2034 HOH HOH A . D 4 HOH 35 2035 2035 HOH HOH A . D 4 HOH 36 2036 2036 HOH HOH A . D 4 HOH 37 2037 2037 HOH HOH A . D 4 HOH 38 2038 2038 HOH HOH A . D 4 HOH 39 2039 2039 HOH HOH A . D 4 HOH 40 2040 2040 HOH HOH A . D 4 HOH 41 2041 2041 HOH HOH A . D 4 HOH 42 2042 2042 HOH HOH A . D 4 HOH 43 2043 2043 HOH HOH A . D 4 HOH 44 2044 2044 HOH HOH A . D 4 HOH 45 2045 2045 HOH HOH A . D 4 HOH 46 2046 2046 HOH HOH A . D 4 HOH 47 2047 2047 HOH HOH A . D 4 HOH 48 2048 2048 HOH HOH A . D 4 HOH 49 2049 2049 HOH HOH A . D 4 HOH 50 2050 2050 HOH HOH A . D 4 HOH 51 2051 2051 HOH HOH A . D 4 HOH 52 2052 2052 HOH HOH A . D 4 HOH 53 2053 2053 HOH HOH A . D 4 HOH 54 2054 2054 HOH HOH A . D 4 HOH 55 2055 2055 HOH HOH A . D 4 HOH 56 2056 2056 HOH HOH A . D 4 HOH 57 2057 2057 HOH HOH A . D 4 HOH 58 2058 2058 HOH HOH A . D 4 HOH 59 2059 2059 HOH HOH A . D 4 HOH 60 2060 2060 HOH HOH A . D 4 HOH 61 2061 2061 HOH HOH A . D 4 HOH 62 2062 2062 HOH HOH A . D 4 HOH 63 2063 2063 HOH HOH A . D 4 HOH 64 2064 2064 HOH HOH A . D 4 HOH 65 2065 2065 HOH HOH A . D 4 HOH 66 2066 2066 HOH HOH A . D 4 HOH 67 2067 2067 HOH HOH A . D 4 HOH 68 2068 2068 HOH HOH A . D 4 HOH 69 2069 2069 HOH HOH A . D 4 HOH 70 2070 2070 HOH HOH A . D 4 HOH 71 2071 2071 HOH HOH A . D 4 HOH 72 2072 2072 HOH HOH A . D 4 HOH 73 2073 2073 HOH HOH A . D 4 HOH 74 2074 2074 HOH HOH A . D 4 HOH 75 2075 2075 HOH HOH A . D 4 HOH 76 2076 2076 HOH HOH A . D 4 HOH 77 2077 2077 HOH HOH A . D 4 HOH 78 2078 2078 HOH HOH A . D 4 HOH 79 2079 2079 HOH HOH A . D 4 HOH 80 2080 2080 HOH HOH A . D 4 HOH 81 2081 2081 HOH HOH A . D 4 HOH 82 2082 2082 HOH HOH A . D 4 HOH 83 2083 2083 HOH HOH A . D 4 HOH 84 2084 2084 HOH HOH A . D 4 HOH 85 2085 2085 HOH HOH A . D 4 HOH 86 2086 2086 HOH HOH A . D 4 HOH 87 2087 2087 HOH HOH A . D 4 HOH 88 2088 2088 HOH HOH A . D 4 HOH 89 2089 2089 HOH HOH A . D 4 HOH 90 2090 2090 HOH HOH A . D 4 HOH 91 2091 2091 HOH HOH A . D 4 HOH 92 2092 2092 HOH HOH A . D 4 HOH 93 2093 2093 HOH HOH A . D 4 HOH 94 2094 2094 HOH HOH A . D 4 HOH 95 2095 2095 HOH HOH A . D 4 HOH 96 2096 2096 HOH HOH A . D 4 HOH 97 2097 2097 HOH HOH A . D 4 HOH 98 2098 2098 HOH HOH A . D 4 HOH 99 2099 2099 HOH HOH A . D 4 HOH 100 2100 2100 HOH HOH A . D 4 HOH 101 2101 2101 HOH HOH A . D 4 HOH 102 2102 2102 HOH HOH A . D 4 HOH 103 2103 2103 HOH HOH A . D 4 HOH 104 2104 2104 HOH HOH A . D 4 HOH 105 2105 2105 HOH HOH A . D 4 HOH 106 2106 2106 HOH HOH A . D 4 HOH 107 2107 2107 HOH HOH A . D 4 HOH 108 2108 2108 HOH HOH A . D 4 HOH 109 2109 2109 HOH HOH A . D 4 HOH 110 2110 2110 HOH HOH A . D 4 HOH 111 2111 2111 HOH HOH A . D 4 HOH 112 2112 2112 HOH HOH A . D 4 HOH 113 2113 2113 HOH HOH A . D 4 HOH 114 2114 2114 HOH HOH A . D 4 HOH 115 2115 2115 HOH HOH A . D 4 HOH 116 2116 2116 HOH HOH A . D 4 HOH 117 2117 2117 HOH HOH A . E 4 HOH 1 2001 2001 HOH HOH B . E 4 HOH 2 2002 2002 HOH HOH B . E 4 HOH 3 2003 2003 HOH HOH B . E 4 HOH 4 2004 2004 HOH HOH B . E 4 HOH 5 2005 2005 HOH HOH B . E 4 HOH 6 2006 2006 HOH HOH B . E 4 HOH 7 2007 2007 HOH HOH B . E 4 HOH 8 2008 2008 HOH HOH B . E 4 HOH 9 2009 2009 HOH HOH B . E 4 HOH 10 2010 2010 HOH HOH B . E 4 HOH 11 2011 2011 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2840 ? 1 MORE -15.8 ? 1 'SSA (A^2)' 11350 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 2072 ? D HOH . 2 1 A HOH 2074 ? D HOH . 3 1 A HOH 2099 ? D HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-06-13 2 'Structure model' 1 1 2012-07-04 3 'Structure model' 1 2 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' Other 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 10.6812 1.5931 28.3900 0.0522 0.0507 0.0967 -0.0136 -0.0164 -0.0017 0.0742 0.0739 0.0766 0.0263 -0.0175 0.0304 -0.0880 0.0753 0.0202 -0.0257 0.0601 0.0533 0.0254 -0.0052 -0.0468 'X-RAY DIFFRACTION' 2 ? refined 20.7950 -15.1480 1.4079 0.4768 0.3563 0.2249 0.0163 0.0970 -0.1053 0.0136 0.0030 0.0001 0.0057 -0.0012 -0.0004 0.0112 0.0035 -0.0257 -0.0031 -0.0163 -0.0184 0.0095 -0.0146 0.0006 'X-RAY DIFFRACTION' 3 ? refined 17.9045 -5.6665 6.5232 0.3278 0.4569 0.1300 -0.0833 0.1397 -0.0268 0.0339 0.0190 0.0342 -0.0093 -0.0192 -0.0127 0.0227 0.0350 0.0052 -0.0910 -0.0138 -0.0110 0.0398 0.0193 0.0285 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESID -1:104 OR RESID 139:187)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESID 105:138)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? 'CHAIN B' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 XDS 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_entry_details.entry_id 4AL5 _pdbx_entry_details.compound_details 'ENGINEERED RESIDUE IN CHAIN A, SER 22 TO CYS' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE DATABASE ENTRY IS MISSING THE N-TERMINAL 20 AMINO ACIDS BECAUSE THE START CODON IS INCORRECTLY ANNOTATED. ( THEREFORE THE DATABASE ENTRY IS ONLY 167 AMINO ACIDS IN LENGTH.) CRRNA REPEAT SEQUENCE DERIVED FROM CRISPR LOCUS LOCATED 2926520-2927393 ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H61 B A 15 ? ? O B HOH 2004 ? ? 1.22 2 1 H A ASP 65 ? ? O A HOH 2056 ? ? 1.41 3 1 O A ASP 65 ? ? O A HOH 2058 ? ? 1.50 4 1 H A ALA 64 ? ? O A HOH 2003 ? ? 1.60 5 1 O A HOH 2049 ? ? O A HOH 2050 ? ? 1.66 6 1 O A HOH 2114 ? ? O B HOH 2009 ? ? 1.92 7 1 O A HOH 2014 ? ? O A HOH 2067 ? ? 1.92 8 1 O A HOH 2008 ? ? O A HOH 2021 ? ? 1.99 9 1 OD2 A ASP 66 ? ? O A HOH 2038 ? ? 2.03 10 1 O A HOH 2022 ? ? O A HOH 2049 ? ? 2.08 11 1 N6 B A 15 ? ? O B HOH 2004 ? ? 2.14 12 1 OP2 B G 17 ? ? O B HOH 2006 ? ? 2.14 13 1 O A HOH 2079 ? ? O A HOH 2107 ? ? 2.15 14 1 O A HOH 2049 ? ? O A HOH 2052 ? ? 2.17 15 1 O A HOH 2094 ? ? O B HOH 2002 ? ? 2.19 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 N7 _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 G _pdbx_validate_rmsd_bond.auth_seq_id_1 11 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 C8 _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 G _pdbx_validate_rmsd_bond.auth_seq_id_2 11 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.255 _pdbx_validate_rmsd_bond.bond_target_value 1.305 _pdbx_validate_rmsd_bond.bond_deviation -0.050 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N7 _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 G _pdbx_validate_rmsd_angle.auth_seq_id_1 11 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 C8 _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 G _pdbx_validate_rmsd_angle.auth_seq_id_2 11 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N9 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 G _pdbx_validate_rmsd_angle.auth_seq_id_3 11 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 116.55 _pdbx_validate_rmsd_angle.angle_target_value 113.10 _pdbx_validate_rmsd_angle.angle_deviation 3.45 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 1 ? ? -105.88 75.24 2 1 ASP A 38 ? ? -144.72 30.51 3 1 LEU A 47 ? ? -38.23 133.53 4 1 ALA A 62 ? ? -176.35 -173.54 5 1 LYS A 106 ? ? -68.89 74.60 6 1 HIS A 120 ? ? -141.90 19.76 7 1 ASP A 121 ? ? 47.70 26.03 8 1 ASP A 140 ? ? -102.32 62.95 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A PHE -1 ? CG ? A PHE 3 CG 2 1 Y 1 A PHE -1 ? CD1 ? A PHE 3 CD1 3 1 Y 1 A PHE -1 ? CD2 ? A PHE 3 CD2 4 1 Y 1 A PHE -1 ? CE1 ? A PHE 3 CE1 5 1 Y 1 A PHE -1 ? CE2 ? A PHE 3 CE2 6 1 Y 1 A PHE -1 ? CZ ? A PHE 3 CZ 7 1 Y 1 A THR 0 ? OG1 ? A THR 4 OG1 8 1 Y 1 A THR 0 ? CG2 ? A THR 4 CG2 9 1 Y 1 A ARG 39 ? CG ? A ARG 43 CG 10 1 Y 1 A ARG 39 ? CD ? A ARG 43 CD 11 1 Y 1 A ARG 39 ? NE ? A ARG 43 NE 12 1 Y 1 A ARG 39 ? CZ ? A ARG 43 CZ 13 1 Y 1 A ARG 39 ? NH1 ? A ARG 43 NH1 14 1 Y 1 A ARG 39 ? NH2 ? A ARG 43 NH2 15 1 Y 1 A ARG 51 ? CD ? A ARG 55 CD 16 1 Y 1 A ARG 51 ? NE ? A ARG 55 NE 17 1 Y 1 A ARG 51 ? CZ ? A ARG 55 CZ 18 1 Y 1 A ARG 51 ? NH1 ? A ARG 55 NH1 19 1 Y 1 A ARG 51 ? NH2 ? A ARG 55 NH2 20 1 Y 1 A ARG 53 ? NE ? A ARG 57 NE 21 1 Y 1 A ARG 53 ? CZ ? A ARG 57 CZ 22 1 Y 1 A ARG 53 ? NH1 ? A ARG 57 NH1 23 1 Y 1 A ARG 53 ? NH2 ? A ARG 57 NH2 24 1 Y 1 A GLU 77 ? CG ? A GLU 81 CG 25 1 Y 1 A GLU 77 ? CD ? A GLU 81 CD 26 1 Y 1 A GLU 77 ? OE1 ? A GLU 81 OE1 27 1 Y 1 A GLU 77 ? OE2 ? A GLU 81 OE2 28 1 Y 1 A LYS 106 ? CD ? A LYS 110 CD 29 1 Y 1 A LYS 106 ? CE ? A LYS 110 CE 30 1 Y 1 A LYS 106 ? NZ ? A LYS 110 NZ 31 1 Y 1 A ARG 118 ? CG ? A ARG 122 CG 32 1 Y 1 A ARG 118 ? CD ? A ARG 122 CD 33 1 Y 1 A ARG 118 ? NE ? A ARG 122 NE 34 1 Y 1 A ARG 118 ? CZ ? A ARG 122 CZ 35 1 Y 1 A ARG 118 ? NH1 ? A ARG 122 NH1 36 1 Y 1 A ARG 118 ? NH2 ? A ARG 122 NH2 37 1 Y 1 A LEU 122 ? CD1 ? A LEU 126 CD1 38 1 Y 1 A LEU 122 ? CD2 ? A LEU 126 CD2 39 1 Y 1 A GLU 126 ? CG ? A GLU 130 CG 40 1 Y 1 A GLU 126 ? CD ? A GLU 130 CD 41 1 Y 1 A GLU 126 ? OE1 ? A GLU 130 OE1 42 1 Y 1 A GLU 126 ? OE2 ? A GLU 130 OE2 43 1 Y 1 A ARG 128 ? CG ? A ARG 132 CG 44 1 Y 1 A ARG 128 ? CD ? A ARG 132 CD 45 1 Y 1 A ARG 128 ? NE ? A ARG 132 NE 46 1 Y 1 A ARG 128 ? CZ ? A ARG 132 CZ 47 1 Y 1 A ARG 128 ? NH1 ? A ARG 132 NH1 48 1 Y 1 A ARG 128 ? NH2 ? A ARG 132 NH2 49 1 Y 1 A LYS 129 ? CE ? A LYS 133 CE 50 1 Y 1 A LYS 129 ? NZ ? A LYS 133 NZ 51 1 Y 1 A ARG 130 ? CG ? A ARG 134 CG 52 1 Y 1 A ARG 130 ? CD ? A ARG 134 CD 53 1 Y 1 A ARG 130 ? NE ? A ARG 134 NE 54 1 Y 1 A ARG 130 ? CZ ? A ARG 134 CZ 55 1 Y 1 A ARG 130 ? NH1 ? A ARG 134 NH1 56 1 Y 1 A ARG 130 ? NH2 ? A ARG 134 NH2 57 1 Y 1 A ARG 137 ? CG ? A ARG 141 CG 58 1 Y 1 A ARG 137 ? CD ? A ARG 141 CD 59 1 Y 1 A ARG 137 ? NE ? A ARG 141 NE 60 1 Y 1 A ARG 137 ? CZ ? A ARG 141 CZ 61 1 Y 1 A ARG 137 ? NH1 ? A ARG 141 NH1 62 1 Y 1 A ARG 137 ? NH2 ? A ARG 141 NH2 63 1 Y 1 A ARG 147 ? CG ? A ARG 151 CG 64 1 Y 1 A ARG 147 ? CD ? A ARG 151 CD 65 1 Y 1 A ARG 147 ? NE ? A ARG 151 NE 66 1 Y 1 A ARG 147 ? CZ ? A ARG 151 CZ 67 1 Y 1 A ARG 147 ? NH1 ? A ARG 151 NH1 68 1 Y 1 A ARG 147 ? NH2 ? A ARG 151 NH2 69 1 Y 1 A GLN 149 ? CG ? A GLN 153 CG 70 1 Y 1 A GLN 149 ? CD ? A GLN 153 CD 71 1 Y 1 A GLN 149 ? OE1 ? A GLN 153 OE1 72 1 Y 1 A GLN 149 ? NE2 ? A GLN 153 NE2 73 1 Y 1 A GLU 170 ? CD ? A GLU 174 CD 74 1 Y 1 A GLU 170 ? OE1 ? A GLU 174 OE1 75 1 Y 1 A GLU 170 ? OE2 ? A GLU 174 OE2 76 1 Y 1 B C 4 ? P ? B C 3 P 77 1 Y 1 B C 4 ? OP1 ? B C 3 OP1 78 1 Y 1 B C 4 ? OP2 ? B C 3 OP2 79 1 Y 1 B C 4 ? "O5'" ? B C 3 "O5'" 80 1 Y 1 B C 4 ? "C5'" ? B C 3 "C5'" 81 1 Y 1 B C 4 ? "C4'" ? B C 3 "C4'" 82 1 Y 1 B C 4 ? "O4'" ? B C 3 "O4'" 83 1 Y 1 B C 4 ? "C3'" ? B C 3 "C3'" 84 1 Y 1 B C 4 ? "C2'" ? B C 3 "C2'" 85 1 Y 1 B C 4 ? "O2'" ? B C 3 "O2'" 86 1 Y 1 B C 4 ? "C1'" ? B C 3 "C1'" 87 1 Y 1 B C 4 ? N1 ? B C 3 N1 88 1 Y 1 B C 4 ? C2 ? B C 3 C2 89 1 Y 1 B C 4 ? O2 ? B C 3 O2 90 1 Y 1 B C 4 ? N3 ? B C 3 N3 91 1 Y 1 B C 4 ? C4 ? B C 3 C4 92 1 Y 1 B C 4 ? N4 ? B C 3 N4 93 1 Y 1 B C 4 ? C5 ? B C 3 C5 94 1 Y 1 B C 4 ? C6 ? B C 3 C6 95 1 Y 1 B C 21 ? "C5'" ? B C 20 "C5'" 96 1 Y 1 B C 21 ? "C4'" ? B C 20 "C4'" 97 1 Y 1 B C 21 ? "O4'" ? B C 20 "O4'" 98 1 Y 1 B C 21 ? "C3'" ? B C 20 "C3'" 99 1 Y 1 B C 21 ? "O3'" ? B C 20 "O3'" 100 1 Y 1 B C 21 ? "C2'" ? B C 20 "C2'" 101 1 Y 1 B C 21 ? "O2'" ? B C 20 "O2'" 102 1 Y 1 B C 21 ? "C1'" ? B C 20 "C1'" 103 1 Y 1 B C 21 ? N1 ? B C 20 N1 104 1 Y 1 B C 21 ? C2 ? B C 20 C2 105 1 Y 1 B C 21 ? O2 ? B C 20 O2 106 1 Y 1 B C 21 ? N3 ? B C 20 N3 107 1 Y 1 B C 21 ? C4 ? B C 20 C4 108 1 Y 1 B C 21 ? N4 ? B C 20 N4 109 1 Y 1 B C 21 ? C5 ? B C 20 C5 110 1 Y 1 B C 21 ? C6 ? B C 20 C6 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -3 ? A GLY 1 2 1 Y 1 A SER -2 ? A SER 2 3 1 Y 1 B U 2 ? B U 1 4 1 Y 1 B U 3 ? B U 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 GOL C1 C N N 247 GOL O1 O N N 248 GOL C2 C N N 249 GOL O2 O N N 250 GOL C3 C N N 251 GOL O3 O N N 252 GOL H11 H N N 253 GOL H12 H N N 254 GOL HO1 H N N 255 GOL H2 H N N 256 GOL HO2 H N N 257 GOL H31 H N N 258 GOL H32 H N N 259 GOL HO3 H N N 260 HIS N N N N 261 HIS CA C N S 262 HIS C C N N 263 HIS O O N N 264 HIS CB C N N 265 HIS CG C Y N 266 HIS ND1 N Y N 267 HIS CD2 C Y N 268 HIS CE1 C Y N 269 HIS NE2 N Y N 270 HIS OXT O N N 271 HIS H H N N 272 HIS H2 H N N 273 HIS HA H N N 274 HIS HB2 H N N 275 HIS HB3 H N N 276 HIS HD1 H N N 277 HIS HD2 H N N 278 HIS HE1 H N N 279 HIS HE2 H N N 280 HIS HXT H N N 281 HOH O O N N 282 HOH H1 H N N 283 HOH H2 H N N 284 ILE N N N N 285 ILE CA C N S 286 ILE C C N N 287 ILE O O N N 288 ILE CB C N S 289 ILE CG1 C N N 290 ILE CG2 C N N 291 ILE CD1 C N N 292 ILE OXT O N N 293 ILE H H N N 294 ILE H2 H N N 295 ILE HA H N N 296 ILE HB H N N 297 ILE HG12 H N N 298 ILE HG13 H N N 299 ILE HG21 H N N 300 ILE HG22 H N N 301 ILE HG23 H N N 302 ILE HD11 H N N 303 ILE HD12 H N N 304 ILE HD13 H N N 305 ILE HXT H N N 306 LEU N N N N 307 LEU CA C N S 308 LEU C C N N 309 LEU O O N N 310 LEU CB C N N 311 LEU CG C N N 312 LEU CD1 C N N 313 LEU CD2 C N N 314 LEU OXT O N N 315 LEU H H N N 316 LEU H2 H N N 317 LEU HA H N N 318 LEU HB2 H N N 319 LEU HB3 H N N 320 LEU HG H N N 321 LEU HD11 H N N 322 LEU HD12 H N N 323 LEU HD13 H N N 324 LEU HD21 H N N 325 LEU HD22 H N N 326 LEU HD23 H N N 327 LEU HXT H N N 328 LYS N N N N 329 LYS CA C N S 330 LYS C C N N 331 LYS O O N N 332 LYS CB C N N 333 LYS CG C N N 334 LYS CD C N N 335 LYS CE C N N 336 LYS NZ N N N 337 LYS OXT O N N 338 LYS H H N N 339 LYS H2 H N N 340 LYS HA H N N 341 LYS HB2 H N N 342 LYS HB3 H N N 343 LYS HG2 H N N 344 LYS HG3 H N N 345 LYS HD2 H N N 346 LYS HD3 H N N 347 LYS HE2 H N N 348 LYS HE3 H N N 349 LYS HZ1 H N N 350 LYS HZ2 H N N 351 LYS HZ3 H N N 352 LYS HXT H N N 353 MET N N N N 354 MET CA C N S 355 MET C C N N 356 MET O O N N 357 MET CB C N N 358 MET CG C N N 359 MET SD S N N 360 MET CE C N N 361 MET OXT O N N 362 MET H H N N 363 MET H2 H N N 364 MET HA H N N 365 MET HB2 H N N 366 MET HB3 H N N 367 MET HG2 H N N 368 MET HG3 H N N 369 MET HE1 H N N 370 MET HE2 H N N 371 MET HE3 H N N 372 MET HXT H N N 373 PHE N N N N 374 PHE CA C N S 375 PHE C C N N 376 PHE O O N N 377 PHE CB C N N 378 PHE CG C Y N 379 PHE CD1 C Y N 380 PHE CD2 C Y N 381 PHE CE1 C Y N 382 PHE CE2 C Y N 383 PHE CZ C Y N 384 PHE OXT O N N 385 PHE H H N N 386 PHE H2 H N N 387 PHE HA H N N 388 PHE HB2 H N N 389 PHE HB3 H N N 390 PHE HD1 H N N 391 PHE HD2 H N N 392 PHE HE1 H N N 393 PHE HE2 H N N 394 PHE HZ H N N 395 PHE HXT H N N 396 PRO N N N N 397 PRO CA C N S 398 PRO C C N N 399 PRO O O N N 400 PRO CB C N N 401 PRO CG C N N 402 PRO CD C N N 403 PRO OXT O N N 404 PRO H H N N 405 PRO HA H N N 406 PRO HB2 H N N 407 PRO HB3 H N N 408 PRO HG2 H N N 409 PRO HG3 H N N 410 PRO HD2 H N N 411 PRO HD3 H N N 412 PRO HXT H N N 413 SER N N N N 414 SER CA C N S 415 SER C C N N 416 SER O O N N 417 SER CB C N N 418 SER OG O N N 419 SER OXT O N N 420 SER H H N N 421 SER H2 H N N 422 SER HA H N N 423 SER HB2 H N N 424 SER HB3 H N N 425 SER HG H N N 426 SER HXT H N N 427 THR N N N N 428 THR CA C N S 429 THR C C N N 430 THR O O N N 431 THR CB C N R 432 THR OG1 O N N 433 THR CG2 C N N 434 THR OXT O N N 435 THR H H N N 436 THR H2 H N N 437 THR HA H N N 438 THR HB H N N 439 THR HG1 H N N 440 THR HG21 H N N 441 THR HG22 H N N 442 THR HG23 H N N 443 THR HXT H N N 444 TRP N N N N 445 TRP CA C N S 446 TRP C C N N 447 TRP O O N N 448 TRP CB C N N 449 TRP CG C Y N 450 TRP CD1 C Y N 451 TRP CD2 C Y N 452 TRP NE1 N Y N 453 TRP CE2 C Y N 454 TRP CE3 C Y N 455 TRP CZ2 C Y N 456 TRP CZ3 C Y N 457 TRP CH2 C Y N 458 TRP OXT O N N 459 TRP H H N N 460 TRP H2 H N N 461 TRP HA H N N 462 TRP HB2 H N N 463 TRP HB3 H N N 464 TRP HD1 H N N 465 TRP HE1 H N N 466 TRP HE3 H N N 467 TRP HZ2 H N N 468 TRP HZ3 H N N 469 TRP HH2 H N N 470 TRP HXT H N N 471 TYR N N N N 472 TYR CA C N S 473 TYR C C N N 474 TYR O O N N 475 TYR CB C N N 476 TYR CG C Y N 477 TYR CD1 C Y N 478 TYR CD2 C Y N 479 TYR CE1 C Y N 480 TYR CE2 C Y N 481 TYR CZ C Y N 482 TYR OH O N N 483 TYR OXT O N N 484 TYR H H N N 485 TYR H2 H N N 486 TYR HA H N N 487 TYR HB2 H N N 488 TYR HB3 H N N 489 TYR HD1 H N N 490 TYR HD2 H N N 491 TYR HE1 H N N 492 TYR HE2 H N N 493 TYR HH H N N 494 TYR HXT H N N 495 U OP3 O N N 496 U P P N N 497 U OP1 O N N 498 U OP2 O N N 499 U "O5'" O N N 500 U "C5'" C N N 501 U "C4'" C N R 502 U "O4'" O N N 503 U "C3'" C N S 504 U "O3'" O N N 505 U "C2'" C N R 506 U "O2'" O N N 507 U "C1'" C N R 508 U N1 N N N 509 U C2 C N N 510 U O2 O N N 511 U N3 N N N 512 U C4 C N N 513 U O4 O N N 514 U C5 C N N 515 U C6 C N N 516 U HOP3 H N N 517 U HOP2 H N N 518 U "H5'" H N N 519 U "H5''" H N N 520 U "H4'" H N N 521 U "H3'" H N N 522 U "HO3'" H N N 523 U "H2'" H N N 524 U "HO2'" H N N 525 U "H1'" H N N 526 U H3 H N N 527 U H5 H N N 528 U H6 H N N 529 VAL N N N N 530 VAL CA C N S 531 VAL C C N N 532 VAL O O N N 533 VAL CB C N N 534 VAL CG1 C N N 535 VAL CG2 C N N 536 VAL OXT O N N 537 VAL H H N N 538 VAL H2 H N N 539 VAL HA H N N 540 VAL HB H N N 541 VAL HG11 H N N 542 VAL HG12 H N N 543 VAL HG13 H N N 544 VAL HG21 H N N 545 VAL HG22 H N N 546 VAL HG23 H N N 547 VAL HXT H N N 548 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 GOL C1 O1 sing N N 244 GOL C1 C2 sing N N 245 GOL C1 H11 sing N N 246 GOL C1 H12 sing N N 247 GOL O1 HO1 sing N N 248 GOL C2 O2 sing N N 249 GOL C2 C3 sing N N 250 GOL C2 H2 sing N N 251 GOL O2 HO2 sing N N 252 GOL C3 O3 sing N N 253 GOL C3 H31 sing N N 254 GOL C3 H32 sing N N 255 GOL O3 HO3 sing N N 256 HIS N CA sing N N 257 HIS N H sing N N 258 HIS N H2 sing N N 259 HIS CA C sing N N 260 HIS CA CB sing N N 261 HIS CA HA sing N N 262 HIS C O doub N N 263 HIS C OXT sing N N 264 HIS CB CG sing N N 265 HIS CB HB2 sing N N 266 HIS CB HB3 sing N N 267 HIS CG ND1 sing Y N 268 HIS CG CD2 doub Y N 269 HIS ND1 CE1 doub Y N 270 HIS ND1 HD1 sing N N 271 HIS CD2 NE2 sing Y N 272 HIS CD2 HD2 sing N N 273 HIS CE1 NE2 sing Y N 274 HIS CE1 HE1 sing N N 275 HIS NE2 HE2 sing N N 276 HIS OXT HXT sing N N 277 HOH O H1 sing N N 278 HOH O H2 sing N N 279 ILE N CA sing N N 280 ILE N H sing N N 281 ILE N H2 sing N N 282 ILE CA C sing N N 283 ILE CA CB sing N N 284 ILE CA HA sing N N 285 ILE C O doub N N 286 ILE C OXT sing N N 287 ILE CB CG1 sing N N 288 ILE CB CG2 sing N N 289 ILE CB HB sing N N 290 ILE CG1 CD1 sing N N 291 ILE CG1 HG12 sing N N 292 ILE CG1 HG13 sing N N 293 ILE CG2 HG21 sing N N 294 ILE CG2 HG22 sing N N 295 ILE CG2 HG23 sing N N 296 ILE CD1 HD11 sing N N 297 ILE CD1 HD12 sing N N 298 ILE CD1 HD13 sing N N 299 ILE OXT HXT sing N N 300 LEU N CA sing N N 301 LEU N H sing N N 302 LEU N H2 sing N N 303 LEU CA C sing N N 304 LEU CA CB sing N N 305 LEU CA HA sing N N 306 LEU C O doub N N 307 LEU C OXT sing N N 308 LEU CB CG sing N N 309 LEU CB HB2 sing N N 310 LEU CB HB3 sing N N 311 LEU CG CD1 sing N N 312 LEU CG CD2 sing N N 313 LEU CG HG sing N N 314 LEU CD1 HD11 sing N N 315 LEU CD1 HD12 sing N N 316 LEU CD1 HD13 sing N N 317 LEU CD2 HD21 sing N N 318 LEU CD2 HD22 sing N N 319 LEU CD2 HD23 sing N N 320 LEU OXT HXT sing N N 321 LYS N CA sing N N 322 LYS N H sing N N 323 LYS N H2 sing N N 324 LYS CA C sing N N 325 LYS CA CB sing N N 326 LYS CA HA sing N N 327 LYS C O doub N N 328 LYS C OXT sing N N 329 LYS CB CG sing N N 330 LYS CB HB2 sing N N 331 LYS CB HB3 sing N N 332 LYS CG CD sing N N 333 LYS CG HG2 sing N N 334 LYS CG HG3 sing N N 335 LYS CD CE sing N N 336 LYS CD HD2 sing N N 337 LYS CD HD3 sing N N 338 LYS CE NZ sing N N 339 LYS CE HE2 sing N N 340 LYS CE HE3 sing N N 341 LYS NZ HZ1 sing N N 342 LYS NZ HZ2 sing N N 343 LYS NZ HZ3 sing N N 344 LYS OXT HXT sing N N 345 MET N CA sing N N 346 MET N H sing N N 347 MET N H2 sing N N 348 MET CA C sing N N 349 MET CA CB sing N N 350 MET CA HA sing N N 351 MET C O doub N N 352 MET C OXT sing N N 353 MET CB CG sing N N 354 MET CB HB2 sing N N 355 MET CB HB3 sing N N 356 MET CG SD sing N N 357 MET CG HG2 sing N N 358 MET CG HG3 sing N N 359 MET SD CE sing N N 360 MET CE HE1 sing N N 361 MET CE HE2 sing N N 362 MET CE HE3 sing N N 363 MET OXT HXT sing N N 364 PHE N CA sing N N 365 PHE N H sing N N 366 PHE N H2 sing N N 367 PHE CA C sing N N 368 PHE CA CB sing N N 369 PHE CA HA sing N N 370 PHE C O doub N N 371 PHE C OXT sing N N 372 PHE CB CG sing N N 373 PHE CB HB2 sing N N 374 PHE CB HB3 sing N N 375 PHE CG CD1 doub Y N 376 PHE CG CD2 sing Y N 377 PHE CD1 CE1 sing Y N 378 PHE CD1 HD1 sing N N 379 PHE CD2 CE2 doub Y N 380 PHE CD2 HD2 sing N N 381 PHE CE1 CZ doub Y N 382 PHE CE1 HE1 sing N N 383 PHE CE2 CZ sing Y N 384 PHE CE2 HE2 sing N N 385 PHE CZ HZ sing N N 386 PHE OXT HXT sing N N 387 PRO N CA sing N N 388 PRO N CD sing N N 389 PRO N H sing N N 390 PRO CA C sing N N 391 PRO CA CB sing N N 392 PRO CA HA sing N N 393 PRO C O doub N N 394 PRO C OXT sing N N 395 PRO CB CG sing N N 396 PRO CB HB2 sing N N 397 PRO CB HB3 sing N N 398 PRO CG CD sing N N 399 PRO CG HG2 sing N N 400 PRO CG HG3 sing N N 401 PRO CD HD2 sing N N 402 PRO CD HD3 sing N N 403 PRO OXT HXT sing N N 404 SER N CA sing N N 405 SER N H sing N N 406 SER N H2 sing N N 407 SER CA C sing N N 408 SER CA CB sing N N 409 SER CA HA sing N N 410 SER C O doub N N 411 SER C OXT sing N N 412 SER CB OG sing N N 413 SER CB HB2 sing N N 414 SER CB HB3 sing N N 415 SER OG HG sing N N 416 SER OXT HXT sing N N 417 THR N CA sing N N 418 THR N H sing N N 419 THR N H2 sing N N 420 THR CA C sing N N 421 THR CA CB sing N N 422 THR CA HA sing N N 423 THR C O doub N N 424 THR C OXT sing N N 425 THR CB OG1 sing N N 426 THR CB CG2 sing N N 427 THR CB HB sing N N 428 THR OG1 HG1 sing N N 429 THR CG2 HG21 sing N N 430 THR CG2 HG22 sing N N 431 THR CG2 HG23 sing N N 432 THR OXT HXT sing N N 433 TRP N CA sing N N 434 TRP N H sing N N 435 TRP N H2 sing N N 436 TRP CA C sing N N 437 TRP CA CB sing N N 438 TRP CA HA sing N N 439 TRP C O doub N N 440 TRP C OXT sing N N 441 TRP CB CG sing N N 442 TRP CB HB2 sing N N 443 TRP CB HB3 sing N N 444 TRP CG CD1 doub Y N 445 TRP CG CD2 sing Y N 446 TRP CD1 NE1 sing Y N 447 TRP CD1 HD1 sing N N 448 TRP CD2 CE2 doub Y N 449 TRP CD2 CE3 sing Y N 450 TRP NE1 CE2 sing Y N 451 TRP NE1 HE1 sing N N 452 TRP CE2 CZ2 sing Y N 453 TRP CE3 CZ3 doub Y N 454 TRP CE3 HE3 sing N N 455 TRP CZ2 CH2 doub Y N 456 TRP CZ2 HZ2 sing N N 457 TRP CZ3 CH2 sing Y N 458 TRP CZ3 HZ3 sing N N 459 TRP CH2 HH2 sing N N 460 TRP OXT HXT sing N N 461 TYR N CA sing N N 462 TYR N H sing N N 463 TYR N H2 sing N N 464 TYR CA C sing N N 465 TYR CA CB sing N N 466 TYR CA HA sing N N 467 TYR C O doub N N 468 TYR C OXT sing N N 469 TYR CB CG sing N N 470 TYR CB HB2 sing N N 471 TYR CB HB3 sing N N 472 TYR CG CD1 doub Y N 473 TYR CG CD2 sing Y N 474 TYR CD1 CE1 sing Y N 475 TYR CD1 HD1 sing N N 476 TYR CD2 CE2 doub Y N 477 TYR CD2 HD2 sing N N 478 TYR CE1 CZ doub Y N 479 TYR CE1 HE1 sing N N 480 TYR CE2 CZ sing Y N 481 TYR CE2 HE2 sing N N 482 TYR CZ OH sing N N 483 TYR OH HH sing N N 484 TYR OXT HXT sing N N 485 U OP3 P sing N N 486 U OP3 HOP3 sing N N 487 U P OP1 doub N N 488 U P OP2 sing N N 489 U P "O5'" sing N N 490 U OP2 HOP2 sing N N 491 U "O5'" "C5'" sing N N 492 U "C5'" "C4'" sing N N 493 U "C5'" "H5'" sing N N 494 U "C5'" "H5''" sing N N 495 U "C4'" "O4'" sing N N 496 U "C4'" "C3'" sing N N 497 U "C4'" "H4'" sing N N 498 U "O4'" "C1'" sing N N 499 U "C3'" "O3'" sing N N 500 U "C3'" "C2'" sing N N 501 U "C3'" "H3'" sing N N 502 U "O3'" "HO3'" sing N N 503 U "C2'" "O2'" sing N N 504 U "C2'" "C1'" sing N N 505 U "C2'" "H2'" sing N N 506 U "O2'" "HO2'" sing N N 507 U "C1'" N1 sing N N 508 U "C1'" "H1'" sing N N 509 U N1 C2 sing N N 510 U N1 C6 sing N N 511 U C2 O2 doub N N 512 U C2 N3 sing N N 513 U N3 C4 sing N N 514 U N3 H3 sing N N 515 U C4 O4 doub N N 516 U C4 C5 sing N N 517 U C5 C6 doub N N 518 U C5 H5 sing N N 519 U C6 H6 sing N N 520 VAL N CA sing N N 521 VAL N H sing N N 522 VAL N H2 sing N N 523 VAL CA C sing N N 524 VAL CA CB sing N N 525 VAL CA HA sing N N 526 VAL C O doub N N 527 VAL C OXT sing N N 528 VAL CB CG1 sing N N 529 VAL CB CG2 sing N N 530 VAL CB HB sing N N 531 VAL CG1 HG11 sing N N 532 VAL CG1 HG12 sing N N 533 VAL CG1 HG13 sing N N 534 VAL CG2 HG21 sing N N 535 VAL CG2 HG22 sing N N 536 VAL CG2 HG23 sing N N 537 VAL OXT HXT sing N N 538 # _ndb_struct_conf_na.entry_id 4AL5 _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B C 5 1_555 B G 19 1_555 0.190 -0.150 0.227 -16.618 1.175 -1.246 1 B_C6:G20_B B 6 ? B 20 ? 19 1 1 B U 6 1_555 B A 18 1_555 -0.003 -0.303 0.313 -2.027 -3.659 1.784 2 B_U7:A19_B B 7 ? B 19 ? 20 1 1 B G 7 1_555 B C 17 1_555 -0.176 -0.152 0.006 2.966 -6.649 2.319 3 B_G8:C18_B B 8 ? B 18 ? 19 1 1 B C 8 1_555 B G 16 1_555 0.277 0.028 0.011 1.687 -12.306 3.871 4 B_C9:G17_B B 9 ? B 17 ? 19 1 1 B C 9 1_555 B G 15 1_555 -0.215 0.012 -0.201 2.877 3.668 -1.419 5 B_C10:G16_B B 10 ? B 16 ? 19 1 1 B G 10 1_555 B A 14 1_555 6.883 -4.769 0.633 20.019 3.608 -10.150 6 B_G11:A15_B B 11 ? B 15 ? 11 10 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B C 5 1_555 B G 19 1_555 B U 6 1_555 B A 18 1_555 0.071 -1.243 2.918 -2.105 10.570 29.827 -3.896 -0.452 2.342 19.742 3.931 31.673 1 BB_C6U7:A19G20_BB B 6 ? B 20 ? B 7 ? B 19 ? 1 B U 6 1_555 B A 18 1_555 B G 7 1_555 B C 17 1_555 0.923 -1.927 3.140 3.379 3.050 28.155 -4.570 -1.145 3.007 6.219 -6.888 28.514 2 BB_U7G8:C18A19_BB B 7 ? B 19 ? B 8 ? B 18 ? 1 B G 7 1_555 B C 17 1_555 B C 8 1_555 B G 16 1_555 -0.297 -2.317 3.224 -1.931 1.340 31.703 -4.469 0.198 3.138 2.448 3.528 31.787 3 BB_G8C9:G17C18_BB B 8 ? B 18 ? B 9 ? B 17 ? 1 B C 8 1_555 B G 16 1_555 B C 9 1_555 B G 15 1_555 -0.557 -2.253 3.208 -2.183 7.219 27.019 -6.185 0.687 2.567 15.081 4.560 28.033 4 BB_C9C10:G16G17_BB B 9 ? B 17 ? B 10 ? B 16 ? 1 B C 9 1_555 B G 15 1_555 B G 10 1_555 B A 14 1_555 -0.948 -0.633 2.866 -1.343 8.921 62.989 -0.940 0.849 2.781 8.492 1.279 63.566 5 BB_C10G11:A15G16_BB B 10 ? B 16 ? B 11 ? B 15 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 GLYCEROL GOL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2XLK _pdbx_initial_refinement_model.details 'PDB ENTRY 2XLK' #