HEADER MEMBRANE PROTEIN 06-MAR-12 4ALY TITLE BORRELIA BURGDORFERI OUTER SURFACE LIPOPROTEIN BBA64 COMPND MOL_ID: 1; COMPND 2 MOLECULE: P35 ANTIGEN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: P35 ANTIGEN PROTEIN, BBA64; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BORRELIA BURGDORFERI; SOURCE 3 ORGANISM_TAXID: 224326; SOURCE 4 STRAIN: B31; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETM_11 KEYWDS MEMBRANE PROTEIN, LIPOPROTEIN, OUTER SURFACE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.BRANGULIS,K.TARS,I.PETROVSKIS,A.KAZAKS,R.RANKA,V.BAUMANIS REVDAT 4 17-JAN-18 4ALY 1 REMARK REVDAT 3 05-JUN-13 4ALY 1 JRNL REVDAT 2 29-MAY-13 4ALY 1 JRNL REVDAT 1 17-APR-13 4ALY 0 JRNL AUTH K.BRANGULIS,K.TARS,I.PETROVSKIS,A.KAZAKS,R.RANKA,V.BAUMANIS JRNL TITL STRUCTURE OF AN OUTER SURFACE LIPOPROTEIN BBA64 FROM THE JRNL TITL 2 LYME DISEASE AGENT BORRELIA BURGDORFERI WHICH IS CRITICAL TO JRNL TITL 3 ENSURE INFECTION AFTER A TICK BITE JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 69 1099 2013 JRNL REFN ISSN 0907-4449 JRNL PMID 23695254 JRNL DOI 10.1107/S0907444913005726 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 93.09 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 24057 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1292 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1602 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.05 REMARK 3 BIN R VALUE (WORKING SET) : 0.2550 REMARK 3 BIN FREE R VALUE SET COUNT : 110 REMARK 3 BIN FREE R VALUE : 0.3550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3231 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 114 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : 0.50000 REMARK 3 B33 (A**2) : -0.47000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.297 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.241 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.150 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.352 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.918 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.892 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3299 ; 0.018 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4451 ; 2.060 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 395 ; 6.538 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 175 ;37.219 ;25.886 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 629 ;19.177 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;26.369 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 511 ; 0.142 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2449 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT. U REMARK 3 VALUES REFINED INDIVIDUALLY. REMARK 4 REMARK 4 4ALY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-MAR-12. REMARK 100 THE DEPOSITION ID IS D_1290051536. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I911-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : RH-COATED TOROIDAL SI MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25348 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 2000 MME 0.05 M (NH4)2SO4 15% REMARK 280 GLYCEROL, PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.57500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 93.09500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.07000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 93.09500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.57500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.07000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 24 REMARK 465 ALA A 25 REMARK 465 MET A 26 REMARK 465 GLY A 27 REMARK 465 LYS A 28 REMARK 465 ASP A 29 REMARK 465 SER A 30 REMARK 465 ASN A 31 REMARK 465 GLU A 32 REMARK 465 SER A 33 REMARK 465 LYS A 34 REMARK 465 LYS A 35 REMARK 465 HIS A 36 REMARK 465 LYS A 37 REMARK 465 LYS A 38 REMARK 465 GLU A 39 REMARK 465 LYS A 40 REMARK 465 ARG A 41 REMARK 465 LYS A 42 REMARK 465 GLY A 43 REMARK 465 LYS A 44 REMARK 465 VAL A 45 REMARK 465 GLU A 46 REMARK 465 ASN A 47 REMARK 465 LEU A 48 REMARK 465 LEU A 49 REMARK 465 VAL A 50 REMARK 465 ALA A 51 REMARK 465 ILE A 52 REMARK 465 ASN A 53 REMARK 465 ASN A 54 REMARK 465 LEU A 55 REMARK 465 LYS A 56 REMARK 465 ASN A 57 REMARK 465 PRO A 58 REMARK 465 THR A 59 REMARK 465 LYS A 60 REMARK 465 PRO A 61 REMARK 465 ALA A 62 REMARK 465 ALA A 63 REMARK 465 GLY A 64 REMARK 465 LYS A 65 REMARK 465 ASN A 66 REMARK 465 LYS A 67 REMARK 465 ALA A 68 REMARK 465 ASN A 69 REMARK 465 SER A 70 REMARK 465 LYS A 71 REMARK 465 ALA A 72 REMARK 465 SER A 73 REMARK 465 LYS A 74 REMARK 465 GLN A 75 REMARK 465 LYS A 76 REMARK 465 ASN A 77 REMARK 465 ASN A 78 REMARK 465 PRO A 79 REMARK 465 ASN A 80 REMARK 465 ALA A 81 REMARK 465 ASN A 82 REMARK 465 ALA A 83 REMARK 465 ASN A 84 REMARK 465 ASN A 85 REMARK 465 ALA A 86 REMARK 465 PRO A 87 REMARK 465 LYS A 88 REMARK 465 LYS A 89 REMARK 465 ILE A 90 REMARK 465 LEU A 91 REMARK 465 GLY B 24 REMARK 465 ALA B 25 REMARK 465 MET B 26 REMARK 465 GLY B 27 REMARK 465 LYS B 28 REMARK 465 ASP B 29 REMARK 465 SER B 30 REMARK 465 ASN B 31 REMARK 465 GLU B 32 REMARK 465 SER B 33 REMARK 465 LYS B 34 REMARK 465 LYS B 35 REMARK 465 HIS B 36 REMARK 465 LYS B 37 REMARK 465 LYS B 38 REMARK 465 GLU B 39 REMARK 465 LYS B 40 REMARK 465 ARG B 41 REMARK 465 LYS B 42 REMARK 465 GLY B 43 REMARK 465 LYS B 44 REMARK 465 VAL B 45 REMARK 465 GLU B 46 REMARK 465 ASN B 47 REMARK 465 LEU B 48 REMARK 465 LEU B 49 REMARK 465 VAL B 50 REMARK 465 ALA B 51 REMARK 465 ILE B 52 REMARK 465 ASN B 53 REMARK 465 ASN B 54 REMARK 465 LEU B 55 REMARK 465 LYS B 56 REMARK 465 ASN B 57 REMARK 465 PRO B 58 REMARK 465 THR B 59 REMARK 465 LYS B 60 REMARK 465 PRO B 61 REMARK 465 ALA B 62 REMARK 465 ALA B 63 REMARK 465 GLY B 64 REMARK 465 LYS B 65 REMARK 465 ASN B 66 REMARK 465 LYS B 67 REMARK 465 ALA B 68 REMARK 465 ASN B 69 REMARK 465 SER B 70 REMARK 465 LYS B 71 REMARK 465 ALA B 72 REMARK 465 SER B 73 REMARK 465 LYS B 74 REMARK 465 GLN B 75 REMARK 465 LYS B 76 REMARK 465 ASN B 77 REMARK 465 ASN B 78 REMARK 465 PRO B 79 REMARK 465 ASN B 80 REMARK 465 ALA B 81 REMARK 465 ASN B 82 REMARK 465 ALA B 83 REMARK 465 ASN B 84 REMARK 465 ASN B 85 REMARK 465 ALA B 86 REMARK 465 PRO B 87 REMARK 465 LYS B 88 REMARK 465 LYS B 89 REMARK 465 ILE B 90 REMARK 465 LEU B 91 REMARK 465 ASP B 92 REMARK 465 PRO B 93 REMARK 465 GLU B 94 REMARK 465 VAL B 95 REMARK 465 ALA B 96 REMARK 465 LYS B 97 REMARK 465 LEU B 98 REMARK 465 ILE B 99 REMARK 465 GLN B 100 REMARK 465 LYS B 101 REMARK 465 ASP B 216 REMARK 465 LYS B 217 REMARK 465 LEU B 218 REMARK 465 GLN B 219 REMARK 465 GLN B 220 REMARK 465 LEU B 221 REMARK 465 ASN B 222 REMARK 465 LYS B 223 REMARK 465 PRO B 224 REMARK 465 LEU B 298 REMARK 465 ALA B 299 REMARK 465 PRO B 300 REMARK 465 ILE B 301 REMARK 465 GLN B 302 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 105 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O2 SO4 B 1300 O HOH A 2038 1455 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 149 CG HIS A 149 CD2 0.057 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 129 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 LYS A 135 CD - CE - NZ ANGL. DEV. = -13.8 DEGREES REMARK 500 ARG A 155 CG - CD - NE ANGL. DEV. = -15.6 DEGREES REMARK 500 ARG A 155 NE - CZ - NH2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ARG B 119 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP B 124 CB - CG - OD1 ANGL. DEV. = 7.7 DEGREES REMARK 500 ARG B 129 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 129 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG B 155 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG B 155 NE - CZ - NH2 ANGL. DEV. = -7.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 132 -72.96 -120.12 REMARK 500 ASN A 163 19.10 59.02 REMARK 500 ARG A 196 -75.18 -93.89 REMARK 500 ILE B 132 -77.90 -120.11 REMARK 500 ALA B 140 -34.26 -39.84 REMARK 500 VAL B 214 38.04 -95.75 REMARK 500 ASN B 275 63.66 -150.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1298 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1299 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1304 DBREF 4ALY A 27 302 UNP P70848 P70848_BORBU 27 302 DBREF 4ALY B 27 302 UNP P70848 P70848_BORBU 27 302 SEQADV 4ALY GLY A 24 UNP P70848 EXPRESSION TAG SEQADV 4ALY ALA A 25 UNP P70848 EXPRESSION TAG SEQADV 4ALY MET A 26 UNP P70848 EXPRESSION TAG SEQADV 4ALY GLY B 24 UNP P70848 EXPRESSION TAG SEQADV 4ALY ALA B 25 UNP P70848 EXPRESSION TAG SEQADV 4ALY MET B 26 UNP P70848 EXPRESSION TAG SEQRES 1 A 279 GLY ALA MET GLY LYS ASP SER ASN GLU SER LYS LYS HIS SEQRES 2 A 279 LYS LYS GLU LYS ARG LYS GLY LYS VAL GLU ASN LEU LEU SEQRES 3 A 279 VAL ALA ILE ASN ASN LEU LYS ASN PRO THR LYS PRO ALA SEQRES 4 A 279 ALA GLY LYS ASN LYS ALA ASN SER LYS ALA SER LYS GLN SEQRES 5 A 279 LYS ASN ASN PRO ASN ALA ASN ALA ASN ASN ALA PRO LYS SEQRES 6 A 279 LYS ILE LEU ASP PRO GLU VAL ALA LYS LEU ILE GLN LYS SEQRES 7 A 279 ILE LEU ASP ARG SER GLU ASN ILE ILE GLN ILE SER GLU SEQRES 8 A 279 MET ASP SER SER ARG GLY GLU PRO ASN ASP GLN PHE GLY SEQRES 9 A 279 MET ARG ALA GLU ILE PHE SER LYS ILE PHE PHE ASN ALA SEQRES 10 A 279 ASN SER THR VAL HIS PHE ASP SER HIS GLU TYR THR GLU SEQRES 11 A 279 GLU ARG ARG MET LEU TYR THR SER LEU ASN PHE ASN GLU SEQRES 12 A 279 GLY LYS ILE PHE ASN LEU GLY GLN ILE LEU SER LYS LEU SEQRES 13 A 279 SER GLN ASP SER ASN TYR ARG GLY LEU VAL LYS GLU THR SEQRES 14 A 279 LEU ILE ASN ARG GLY PHE SER ILE GLN LEU ALA MET GLU SEQRES 15 A 279 GLU ILE SER ALA LYS ILE LEU ASN VAL LYS ASP LYS LEU SEQRES 16 A 279 GLN GLN LEU ASN LYS PRO ASN LEU GLU THR LEU TYR ASN SEQRES 17 A 279 ASP PHE GLU LYS LEU THR SER LEU LYS GLU LYS TRP LEU SEQRES 18 A 279 LYS ASP THR ASP ASP LEU ILE ASP GLU TYR ASN THR ASN SEQRES 19 A 279 PRO ASP LEU GLN THR ASP VAL SER LYS LEU ASN ASP THR SEQRES 20 A 279 LEU ARG SER LYS ASN SER ARG ALA GLN PHE ALA ASN ILE SEQRES 21 A 279 HIS ASP ILE ILE LEU ASP LEU VAL ASN THR THR THR ASN SEQRES 22 A 279 ILE LEU ALA PRO ILE GLN SEQRES 1 B 279 GLY ALA MET GLY LYS ASP SER ASN GLU SER LYS LYS HIS SEQRES 2 B 279 LYS LYS GLU LYS ARG LYS GLY LYS VAL GLU ASN LEU LEU SEQRES 3 B 279 VAL ALA ILE ASN ASN LEU LYS ASN PRO THR LYS PRO ALA SEQRES 4 B 279 ALA GLY LYS ASN LYS ALA ASN SER LYS ALA SER LYS GLN SEQRES 5 B 279 LYS ASN ASN PRO ASN ALA ASN ALA ASN ASN ALA PRO LYS SEQRES 6 B 279 LYS ILE LEU ASP PRO GLU VAL ALA LYS LEU ILE GLN LYS SEQRES 7 B 279 ILE LEU ASP ARG SER GLU ASN ILE ILE GLN ILE SER GLU SEQRES 8 B 279 MET ASP SER SER ARG GLY GLU PRO ASN ASP GLN PHE GLY SEQRES 9 B 279 MET ARG ALA GLU ILE PHE SER LYS ILE PHE PHE ASN ALA SEQRES 10 B 279 ASN SER THR VAL HIS PHE ASP SER HIS GLU TYR THR GLU SEQRES 11 B 279 GLU ARG ARG MET LEU TYR THR SER LEU ASN PHE ASN GLU SEQRES 12 B 279 GLY LYS ILE PHE ASN LEU GLY GLN ILE LEU SER LYS LEU SEQRES 13 B 279 SER GLN ASP SER ASN TYR ARG GLY LEU VAL LYS GLU THR SEQRES 14 B 279 LEU ILE ASN ARG GLY PHE SER ILE GLN LEU ALA MET GLU SEQRES 15 B 279 GLU ILE SER ALA LYS ILE LEU ASN VAL LYS ASP LYS LEU SEQRES 16 B 279 GLN GLN LEU ASN LYS PRO ASN LEU GLU THR LEU TYR ASN SEQRES 17 B 279 ASP PHE GLU LYS LEU THR SER LEU LYS GLU LYS TRP LEU SEQRES 18 B 279 LYS ASP THR ASP ASP LEU ILE ASP GLU TYR ASN THR ASN SEQRES 19 B 279 PRO ASP LEU GLN THR ASP VAL SER LYS LEU ASN ASP THR SEQRES 20 B 279 LEU ARG SER LYS ASN SER ARG ALA GLN PHE ALA ASN ILE SEQRES 21 B 279 HIS ASP ILE ILE LEU ASP LEU VAL ASN THR THR THR ASN SEQRES 22 B 279 ILE LEU ALA PRO ILE GLN HET SO4 A1303 5 HET SO4 A1304 5 HET SO4 B1298 5 HET SO4 B1299 5 HET SO4 B1300 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 5(O4 S 2-) FORMUL 8 HOH *114(H2 O) HELIX 1 1 ASP A 92 ARG A 119 1 28 HELIX 2 2 ASP A 124 MET A 128 5 5 HELIX 3 3 ARG A 129 SER A 134 1 6 HELIX 4 4 SER A 148 GLU A 150 5 3 HELIX 5 5 TYR A 151 SER A 161 1 11 HELIX 6 6 ASN A 165 GLN A 181 1 17 HELIX 7 7 TYR A 185 ASN A 195 1 11 HELIX 8 8 ARG A 196 ASN A 213 1 18 HELIX 9 9 VAL A 214 LEU A 221 5 8 HELIX 10 10 ASN A 222 ASN A 257 1 36 HELIX 11 11 ASN A 257 ASP A 263 1 7 HELIX 12 12 ASP A 263 LYS A 274 1 12 HELIX 13 13 SER A 276 ALA A 299 1 24 HELIX 14 14 PRO A 300 GLN A 302 5 3 HELIX 15 15 ILE B 102 GLY B 120 1 19 HELIX 16 16 ILE B 132 ILE B 136 5 5 HELIX 17 17 SER B 148 GLU B 150 5 3 HELIX 18 18 TYR B 151 SER B 161 1 11 HELIX 19 19 ASN B 165 GLN B 181 1 17 HELIX 20 20 ASP B 182 ARG B 196 1 15 HELIX 21 21 ARG B 196 VAL B 214 1 19 HELIX 22 22 ASN B 225 ASN B 257 1 33 HELIX 23 23 ASN B 257 ASP B 263 1 7 HELIX 24 24 ASP B 263 SER B 273 1 11 HELIX 25 25 SER B 276 ILE B 297 1 22 SITE 1 AC1 5 ASN A 268 ARG A 272 ARG A 277 HOH A2042 SITE 2 AC1 5 HOH A2043 SITE 1 AC2 7 ASN B 268 ARG B 272 ARG B 277 HOH B2032 SITE 2 AC2 7 HOH B2033 HOH B2043 HOH B2045 SITE 1 AC3 3 ASN B 163 ASN B 165 LYS B 168 SITE 1 AC4 5 LYS A 135 ARG A 186 HOH A2038 LYS B 135 SITE 2 AC4 5 ARG B 186 SITE 1 AC5 2 ASN A 163 ASN A 165 CRYST1 49.150 70.140 186.190 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020346 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014257 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005371 0.00000 MTRIX1 1 -0.999000 0.025860 -0.155400 0.76730 1 MTRIX2 1 0.001855 0.937000 0.927600 -0.17870 1 MTRIX3 1 0.011820 0.131500 -0.936100 0.36850 1